Prupe.7G152500_v2.0.a1

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0016176
Physical Location & Seq
Forward (+)
16292818 .. 16296715
3898 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G152500.1

Sequence Viewer

Length: 1605 bp
ATGAGGTGCCCGTACTGCCTGGCCGGGCAAGGCCGGTGCGCGACGACAACAAACTCCCGTCGTTCGATAACGGAGTGCACGTCGTGTGGTCGTGTGGTGGAAGAGCGCCAATCCCAATTCCACCACCTCTTCCACCTTCGCGCCCAAGACAACCCTCTCTGCCTCGTCACCTCCGACCTCCCCACACTCCACCAGGCCCAACCCAACAACGCAGCCGCCGACGACGACGACCCGTTCGAGCCCACCGGATTCATCACCGCCTTCTCGACCTGGTCCCTGGAGCCCAACCCGCTCTTCCTCCGCTCCTCTCTCTCCTTCTCCGGCCACCTCGCCGAGCTCGAGCGCACCCTCGAATCCACCTCCTCTTCTTCTTCATCATCCCCGTCGTCTTCCACCGTTGTGGTCGATAATCTCAGGGCCTACATGCAAATCATCGATGTCGCTTCGATCCTGGGCTTGGAATACGACATCTCAGACCACGCGTTTCAGCTCTTCAGGGACTGTTGCTCCACTACTTGCTTGAGGAATCGCAGCGTTGAAGCTCTCGCTACGGCTGCTCTTGTGCAGGCCATCAGAGAAGCCCAAGAGCCCAGAACCCTCCAGGAAATCTCAATTGCAGCCAATGTGCCCCAGAAGGAAATTGGTAAGTACATCAAGATACTTGGAGAAGCACTGCAACTTAGTCAGCCCATCAACAGCAACTCCATATCCGTCCATATGCCGCGGTTTTGCACTCTCCTCCAGCTCAATAAATCTGCTCAGAAACTGGCAACTCACATTGGAGAGGTTGTCATAAACAAATGCTTCTGCACTCGTAGGAACCCCATTAGCATCTCTGCAGCTGCAATATATTTAGCCTGCCAGCTTGAAGACAAGCGAAAAACCCAAGCAGAGATTTGTAAGGTGACTGGTCTTACTGAAGTCACTCTCCGGAAAGTTTACAAGGAGCTGTTGGAGAATTGGGATGACTTGCTCCCATCTAATTATACTCCAGCCGTTCCTCCGGAAAGAGCATTCCCTACCACTGTAATCGCTTCAGGCCGTTCTTCAACATCTAAAGTTGATTTAGTCGAAATACCAGTTTATTTGGAGAGAGAGAAGCTGCCTGAAATAAAACCTAACAAACCAAATGAGGGATTAGACATGAATGTTCCGGCCATAGGTAAAGAGGAGTTTGAGCTTAAAGGTAATTCTCGAGGTGCGCAAACCACTGTTTTGAATCAATCAACAACTTTCTGGCAACACCAGGTTCCATATGGCACTTCTGGTTTAAGGACAGCAGGAAAGAACTCTCATAATGGCACCGAAGGAATGGACATCGATGAGCCGCAACGTAACCAGCAGCCTAACCAACAGTTTGAGCAGAAGATGGGTATGGACTCAAACGGTCTTACTAGTACACGAAAGCCAACTCAAATTTTGAGCCCCCCAGCTTCAGGTGCATGCTCAGTTACCAGGCAGTTTCGGTGCCCTCCACCTTCATCAGGTTCTTCTCCAAATGTTTGTTATGTGCTGCCACCAAAGCTGGCACCAGGTTATACTGAGCTTAGAGGTAGCGGGAGTCAAAATGGAAGTGAAAATGCCAAACAGAGTGGAGATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0000976 GO:0000977 GO:0000979 GO:0000988 GO:0000990 GO:0000991 GO:0000993 GO:0001012 GO:0001046 GO:0001047 GO:0001067 GO:0001098 GO:0001099 GO:0001139 GO:0001173 GO:0001174 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009059 GO:0009526 GO:0009527 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019867 GO:0019899 GO:0022607 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031967 GO:0031968 GO:0031975 GO:0032774 GO:0032991 GO:0032993 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0042170 GO:0043167 GO:0043169 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0043565 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060260 GO:0060261 GO:0065003 GO:0065004 GO:0065007 GO:0070063 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0098588 GO:0098805 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990114 GO:1990837 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05169 ko05203 map03022 map05169 map05203
Pfam Domains
Protein Families
TFIIB

Protein Analysis

535

Amino Acids

58.51

Weight (kDa)

6.4

Isoelectric Point (pI)

56.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36650
fragaria_vesca FvH4_1g13530
malus_domestica MD15G1265100.v1.1
prunus_persica Prupe.7G152500_v2.0.a1
pyrus_communis pycom15g23090
rosa_chinensis RchiOBHm_Chr2g0101921
rosa_laevigata RLG00000017116
rosa_multiflora Rmu_sc0010781.1_g000003
rosa_roxburghii Rroxscaffold_2G00140950
rosa_rugosa Rorug02G0103100
rosa_samantha Rh2AG151100 Rh2BG156600 Rh2CG156400 Rh2DG156700
rosa_wichuraiana Rw2G011790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1203
AccB1I GGYRCC 4 cut(s) 6, 1301, 1467, 1528
AccBSI CCGCTC 2 cut(s) 292, 303
AccII CGCG 4 cut(s) 41, 141, 482, 724
AccIII TCCGGA 2 cut(s) 930, 1003
AciI CCGC 8 cut(s) 216, 258, 290, 301, 722, 724, 1328, 1557
AclWI GGATC 1 cut(s) 442
AcoI YGGCCR 3 cut(s) 21, 322, 1155
AcsI RAATTY 1 cut(s) 1416
AcuI CTGAAG 4 cut(s) 478, 939, 1020, 1419
AdeI CACNNNGTG 1 cut(s) 84
AfaI GTAC 3 cut(s) 14, 650, 1399
AfiI CCNNNNNNNGG 5 cut(s) 457, 1133, 1160, 1436, 1484
AflIII ACRYGT 1 cut(s) 480
AgsI TTSAA 4 cut(s) 539, 869, 1050, 1219
AhlI ACTAGT 1 cut(s) 1394
AjiI CACGTC 1 cut(s) 81
AjnI CCWGG 9 cut(s) 18, 192, 269, 276, 450, 600, 1245, 1454, 1531
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AleI CACNNNNGTG 1 cut(s) 398
Alw21I GWGCWC 2 cut(s) 80, 339
Alw44I GTGCAC 1 cut(s) 76
AlwI GGATC 1 cut(s) 442
AlwNI CAGNNNCTG 2 cut(s) 501, 766
Ama87I CYCGRG 2 cut(s) 338, 1194
Aor13HI TCCGGA 2 cut(s) 930, 1003
AoxI GGCC 8 cut(s) 21, 31, 195, 322, 417, 567, 1039, 1155
ApaLI GTGCAC 1 cut(s) 76
ApeKI GCWGC 9 cut(s) 212, 531, 554, 617, 839, 842, 1102, 1342, 1513
ApoI RAATTY 1 cut(s) 1416
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
AspLEI GCGC 5 cut(s) 41, 108, 143, 345, 1204
AspS9I GGNCC 3 cut(s) 196, 273, 417
AsuC2I CCSGG 1 cut(s) 25
AsuHPI GGTGA 3 cut(s) 160, 247, 916
AvaI CYCGRG 2 cut(s) 338, 1194
AvaII GGWCC 1 cut(s) 273
BaeGI GKGCMC 4 cut(s) 11, 80, 630, 1472
BanI GGYRCC 4 cut(s) 6, 1301, 1467, 1528
BanII GRGCYC 5 cut(s) 243, 285, 339, 591, 1427
BbsI GAAGAC 2 cut(s) 381, 876
Bbv12I GWGCWC 2 cut(s) 80, 339
BbvI GCAGC 9 cut(s) 224, 541, 543, 629, 829, 851, 1089, 1354, 1500
BccI CCATC 4 cut(s) 578, 698, 985, 1363
BceAI ACGGC 3 cut(s) 567, 980, 1026
BciT130I CCWGG 9 cut(s) 20, 194, 271, 278, 452, 602, 1247, 1456, 1533
BcnI CCSGG 1 cut(s) 25
BcuI ACTAGT 1 cut(s) 1394
BfaI CTAG 1 cut(s) 1395
BfmI CTRYAG 1 cut(s) 837
BfoI RGCGCY 1 cut(s) 109
Bme18I GGWCC 1 cut(s) 273
BmeT110I CYCGRG 2 cut(s) 338, 1194
BmgBI CACGTC 1 cut(s) 81
BmgT120I GGNCC 3 cut(s) 196, 273, 417
BmiI GGNNCC 8 cut(s) 8, 275, 282, 821, 1251, 1303, 1469, 1530
BmsI GCATC 1 cut(s) 840
BpiI GAAGAC 2 cut(s) 381, 876
BpmI CTGGAG 4 cut(s) 299, 584, 725, 975
BpuEI CTTGAG 1 cut(s) 541
BpuMI CCSGG 1 cut(s) 25
Bsa29I ATCGAT 2 cut(s) 435, 1320
BsaJI CCNNGG 3 cut(s) 276, 451, 722
BsaWI WCCGGW 3 cut(s) 245, 930, 1003
BsaXI ACNNNNNCTCC 8 cut(s) 65, 95, 491, 521, 686, 716, 774, 804
Bsc4I CCNNNNNNNGG 5 cut(s) 457, 1133, 1160, 1436, 1484
Bse118I RCCGGY 1 cut(s) 33
Bse1I ACTGG 3 cut(s) 771, 913, 1079
BseAI TCCGGA 2 cut(s) 930, 1003
BseBI CCWGG 9 cut(s) 20, 194, 271, 278, 452, 602, 1247, 1456, 1533
BseCI ATCGAT 2 cut(s) 435, 1320
BseDI CCNNGG 3 cut(s) 276, 451, 722
BseGI GGATG 2 cut(s) 377, 970
BseLI CCNNNNNNNGG 5 cut(s) 457, 1133, 1160, 1436, 1484
BseMII CTCAG 5 cut(s) 427, 486, 773, 1461, 1533
BseNI ACTGG 3 cut(s) 771, 913, 1079
BseRI GAGGAG 4 cut(s) 295, 352, 728, 1184
BseSI GKGCMC 4 cut(s) 11, 80, 630, 1472
BseXI GCAGC 9 cut(s) 224, 541, 543, 629, 829, 851, 1089, 1354, 1500
BseYI CCCAGC 1 cut(s) 1429
BsgI GTGCAG 2 cut(s) 584, 793
Bsh1236I CGCG 4 cut(s) 41, 141, 482, 724
BshFI GGCC 8 cut(s) 23, 33, 197, 324, 419, 569, 1041, 1157
BshNI GGYRCC 4 cut(s) 6, 1301, 1467, 1528
BshVI ATCGAT 2 cut(s) 435, 1320
BsiHKAI GWGCWC 2 cut(s) 80, 339
BsiHKCI CYCGRG 2 cut(s) 338, 1194
BsiSI CCGG 7 cut(s) 24, 34, 246, 321, 931, 1004, 1154
BslFI GGGAC 2 cut(s) 259, 512
BslI CCNNNNNNNGG 5 cut(s) 457, 1133, 1160, 1436, 1484
BsmFI GGGAC 2 cut(s) 259, 512
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 8 cut(s) 23, 33, 197, 324, 419, 569, 1041, 1157
BsoBI CYCGRG 2 cut(s) 338, 1194
Bsp1286I GDGCHC 9 cut(s) 11, 80, 243, 285, 339, 591, 630, 1427, 1472
Bsp13I TCCGGA 2 cut(s) 930, 1003
Bsp143I GATC 1 cut(s) 447
BspACI CCGC 8 cut(s) 216, 258, 290, 301, 722, 724, 1328, 1557
BspANI GGCC 8 cut(s) 23, 33, 197, 324, 419, 569, 1041, 1157
BspCNI CTCAG 5 cut(s) 426, 485, 772, 1460, 1534
BspDI ATCGAT 2 cut(s) 435, 1320
BspEI TCCGGA 2 cut(s) 930, 1003
BspFNI CGCG 4 cut(s) 41, 141, 482, 724
BspLI GGNNCC 8 cut(s) 8, 275, 282, 821, 1251, 1303, 1469, 1530
BspMAI CTGCAG 1 cut(s) 841
BspPI GGATC 1 cut(s) 442
BspQI GCTCTTC 3 cut(s) 96, 299, 497
BspT107I GGYRCC 4 cut(s) 6, 1301, 1467, 1528
BsrBI CCGCTC 2 cut(s) 292, 303
BsrFI RCCGGY 1 cut(s) 33
BsrI ACTGG 3 cut(s) 771, 913, 1079
BssAI RCCGGY 1 cut(s) 33
BssECI CCNNGG 3 cut(s) 276, 451, 722
BssMI GATC 1 cut(s) 447
Bst2UI CCWGG 9 cut(s) 20, 194, 271, 278, 452, 602, 1247, 1456, 1533
Bst4CI ACNGT 6 cut(s) 397, 503, 1027, 1213, 1356, 1388
Bst6I CTCTTC 5 cut(s) 96, 134, 299, 370, 497
BstC8I GCNNGC 5 cut(s) 567, 859, 863, 1444, 1527
BstDEI CTNAG 8 cut(s) 413, 472, 680, 759, 1447, 1542, 1547, 1602
BstDSI CCRYGG 1 cut(s) 722
BstENI CCTNNNNNAGG 1 cut(s) 1482
BstF5I GGATG 2 cut(s) 377, 970
BstFNI CGCG 4 cut(s) 41, 141, 482, 724
BstH2I RGCGCY 1 cut(s) 109
BstHHI GCGC 5 cut(s) 41, 108, 143, 345, 1204
BstKTI GATC 1 cut(s) 450
BstMBI GATC 1 cut(s) 447
BstMWI GCNNNNNNNGC 5 cut(s) 15, 289, 554, 1439, 1522
BstNI CCWGG 9 cut(s) 20, 194, 271, 278, 452, 602, 1247, 1456, 1533
BstNSI RCATGY 2 cut(s) 427, 1446
BstSFI CTRYAG 1 cut(s) 837
BstSLI GKGCMC 4 cut(s) 11, 80, 630, 1472
BstUI CGCG 4 cut(s) 41, 141, 482, 724
BstV1I GCAGC 9 cut(s) 224, 541, 543, 629, 829, 851, 1089, 1354, 1500
BstV2I GAAGAC 2 cut(s) 381, 876
BstXI CCANNNNNNTGG 1 cut(s) 400
Bsu15I ATCGAT 2 cut(s) 435, 1320
BsuRI GGCC 8 cut(s) 23, 33, 197, 324, 419, 569, 1041, 1157
BsuTUI ATCGAT 2 cut(s) 435, 1320
BtgI CCRYGG 1 cut(s) 722
BtrI CACGTC 1 cut(s) 81
BtsCI GGATG 2 cut(s) 377, 970
BtsI GCAGTG 1 cut(s) 671
BtsIMutI CAGTG 3 cut(s) 671, 1023, 1209
Cac8I GCNNGC 5 cut(s) 567, 859, 863, 1444, 1527
CaiI CAGNNNCTG 2 cut(s) 501, 766
CfoI GCGC 5 cut(s) 41, 108, 143, 345, 1204
Cfr10I RCCGGY 1 cut(s) 33
Cfr13I GGNCC 3 cut(s) 196, 273, 417
Cfr42I CCGCGG 1 cut(s) 725
ClaI ATCGAT 2 cut(s) 435, 1320
CsiI ACCWGGT 3 cut(s) 269, 1245, 1531
Csp6I GTAC 3 cut(s) 13, 649, 1398
CspCI CAANNNNNGTGG 1 cut(s) 1573
CviAII CATG 3 cut(s) 424, 1144, 1443
CviQI GTAC 3 cut(s) 13, 649, 1398
DdeI CTNAG 8 cut(s) 413, 472, 680, 759, 1447, 1542, 1547, 1602
DpnI GATC 1 cut(s) 449
DpnII GATC 1 cut(s) 447
DraIII CACNNNGTG 1 cut(s) 84
EaeI YGGCCR 3 cut(s) 21, 322, 1155
Eam1104I CTCTTC 5 cut(s) 96, 134, 299, 370, 497
EarI CTCTTC 5 cut(s) 96, 134, 299, 370, 497
Ecl136II GAGCTC 1 cut(s) 337
Eco24I GRGCYC 5 cut(s) 243, 285, 339, 591, 1427
Eco47I GGWCC 1 cut(s) 273
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 4 cut(s) 478, 939, 1020, 1419
Eco88I CYCGRG 2 cut(s) 338, 1194
EcoICRI GAGCTC 1 cut(s) 337
EcoNI CCTNNNNNAGG 1 cut(s) 1482
EcoO109I RGGNCCY 1 cut(s) 417
EcoRII CCWGG 9 cut(s) 18, 192, 269, 276, 450, 600, 1245, 1454, 1531
EcoT38I GRGCYC 5 cut(s) 243, 285, 339, 591, 1427
FaeI CATG 3 cut(s) 427, 1147, 1446
FaqI GGGAC 2 cut(s) 259, 512
FatI CATG 3 cut(s) 423, 1143, 1442
FauI CCCGC 2 cut(s) 297, 1550
FauNDI CATATG 2 cut(s) 717, 1255
FokI GGATG 2 cut(s) 364, 977
FriOI GRGCYC 5 cut(s) 243, 285, 339, 591, 1427
FspBI CTAG 1 cut(s) 1395
FspI TGCGCA 1 cut(s) 1203
GlaI GCGC 5 cut(s) 40, 107, 142, 344, 1203
GsaI CCCAGC 1 cut(s) 1433
GsuI CTGGAG 4 cut(s) 299, 584, 725, 975
HaeII RGCGCY 1 cut(s) 109
HaeIII GGCC 8 cut(s) 23, 33, 197, 324, 419, 569, 1041, 1157
HapII CCGG 7 cut(s) 24, 34, 246, 321, 931, 1004, 1154
HhaI GCGC 5 cut(s) 41, 108, 143, 345, 1204
Hin1II CATG 3 cut(s) 427, 1147, 1446
Hin6I GCGC 5 cut(s) 39, 106, 141, 343, 1202
HinP1I GCGC 5 cut(s) 39, 106, 141, 343, 1202
HinfI GANTC 7 cut(s) 249, 353, 526, 1219, 1379, 1561, 1598
HpaII CCGG 7 cut(s) 24, 34, 246, 321, 931, 1004, 1154
HphI GGTGA 3 cut(s) 160, 247, 916
Hpy166II GTNNAC 3 cut(s) 78, 940, 1400
Hpy188I TCNGA 4 cut(s) 175, 475, 575, 762
Hpy188III TCNNGA 5 cut(s) 265, 655, 931, 1004, 1194
Hpy8I GTNNAC 3 cut(s) 78, 940, 1400
Hpy99I CGWCG 7 cut(s) 46, 63, 85, 224, 227, 230, 388
HpyAV CCTTC 6 cut(s) 146, 271, 325, 628, 1301, 1488
HpyCH4III ACNGT 6 cut(s) 397, 503, 1027, 1213, 1356, 1388
HpyCH4IV ACGT 2 cut(s) 80, 1333
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 289, 554, 1439, 1522
HpyF3I CTNAG 8 cut(s) 413, 472, 680, 759, 1447, 1542, 1547, 1602
HpySE526I ACGT 2 cut(s) 80, 1333
Hsp92II CATG 3 cut(s) 427, 1147, 1446
HspAI GCGC 5 cut(s) 39, 106, 141, 343, 1202
Kpn2I TCCGGA 2 cut(s) 930, 1003
KspI CCGCGG 1 cut(s) 725
Kzo9I GATC 1 cut(s) 447
LguI GCTCTTC 3 cut(s) 96, 299, 497
LmnI GCTCC 5 cut(s) 280, 308, 512, 946, 978
Lsp1109I GCAGC 9 cut(s) 224, 541, 543, 629, 829, 851, 1089, 1354, 1500
LweI GCATC 1 cut(s) 840
MabI ACCWGGT 3 cut(s) 269, 1245, 1531
MaeI CTAG 1 cut(s) 1395
MaeII ACGT 2 cut(s) 80, 1333
MaeIII GTNAC 5 cut(s) 166, 904, 922, 1334, 1450
MalI GATC 1 cut(s) 449
MbiI CCGCTC 2 cut(s) 292, 303
MboI GATC 1 cut(s) 447
MfeI CAATTG 1 cut(s) 612
MhlI GDGCHC 9 cut(s) 11, 80, 243, 285, 339, 591, 630, 1427, 1472
MluCI AATT 7 cut(s) 116, 612, 639, 958, 982, 1189, 1416
MluI ACGCGT 1 cut(s) 480
MlyI GAGTC 2 cut(s) 1373, 1570
MmeI TCCRAC 2 cut(s) 198, 933
MroI TCCGGA 2 cut(s) 930, 1003
MseI TTAA 2 cut(s) 1182, 1271
MslI CAYNNNNRTG 1 cut(s) 398
MspA1I CMGCKG 2 cut(s) 724, 842
MspI CCGG 7 cut(s) 24, 34, 246, 321, 931, 1004, 1154
MunI CAATTG 1 cut(s) 612
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 9 cut(s) 20, 194, 271, 278, 452, 602, 1247, 1456, 1533
MvnI CGCG 4 cut(s) 41, 141, 482, 724
MwoI GCNNNNNNNGC 5 cut(s) 15, 289, 554, 1439, 1522
NciI CCSGG 1 cut(s) 25
NdeI CATATG 2 cut(s) 717, 1255
NdeII GATC 1 cut(s) 447
NlaIII CATG 3 cut(s) 427, 1147, 1446
NlaIV GGNNCC 8 cut(s) 8, 275, 282, 821, 1251, 1303, 1469, 1530
NmeAIII GCCGAG 1 cut(s) 358
NmuCI GTSAC 3 cut(s) 166, 904, 922
NsbI TGCGCA 1 cut(s) 1203
NspI RCATGY 2 cut(s) 427, 1446
OliI CACNNNNGTG 1 cut(s) 398
PaeI GCATGC 1 cut(s) 1446
PaeR7I CTCGAG 2 cut(s) 338, 1194
PciSI GCTCTTC 3 cut(s) 96, 299, 497
PcsI WCGNNNNNNNCGW 5 cut(s) 77, 171, 216, 234, 336
PctI GAATGC 1 cut(s) 1013
PfeI GAWTC 5 cut(s) 249, 353, 526, 1219, 1598
PflFI GACNNNGTC 1 cut(s) 271
PfoI TCCNGGA 1 cut(s) 600
PleI GAGTC 2 cut(s) 1373, 1569
PpsI GAGTC 2 cut(s) 1373, 1569
Psp124BI GAGCTC 1 cut(s) 339
Psp6I CCWGG 9 cut(s) 18, 192, 269, 276, 450, 600, 1245, 1454, 1531
PspFI CCCAGC 1 cut(s) 1429
PspGI CCWGG 9 cut(s) 18, 192, 269, 276, 450, 600, 1245, 1454, 1531
PspN4I GGNNCC 8 cut(s) 8, 275, 282, 821, 1251, 1303, 1469, 1530
PspPI GGNCC 3 cut(s) 196, 273, 417
PspXI VCTCGAGB 1 cut(s) 338
PstI CTGCAG 1 cut(s) 841
PstNI CAGNNNCTG 2 cut(s) 501, 766
PsyI GACNNNGTC 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 842
RsaI GTAC 3 cut(s) 14, 650, 1399
RsaNI GTAC 3 cut(s) 13, 649, 1398
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 1 cut(s) 339
SacII CCGCGG 1 cut(s) 725
SapI GCTCTTC 3 cut(s) 96, 299, 497
SaqAI TTAA 2 cut(s) 1182, 1271
Sau3AI GATC 1 cut(s) 447
Sau96I GGNCC 3 cut(s) 196, 273, 417
SchI GAGTC 2 cut(s) 1373, 1570
SduI GDGCHC 9 cut(s) 11, 80, 243, 285, 339, 591, 630, 1427, 1472
SexAI ACCWGGT 3 cut(s) 269, 1245, 1531
SfaNI GCATC 1 cut(s) 840
SfcI CTRYAG 1 cut(s) 837
Sfr274I CTCGAG 2 cut(s) 338, 1194
Sfr303I CCGCGG 1 cut(s) 725
SgrBI CCGCGG 1 cut(s) 725
SinI GGWCC 1 cut(s) 273
SlaI CTCGAG 2 cut(s) 338, 1194
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 3 cut(s) 338, 520, 1194
SmoI CTYRAG 3 cut(s) 338, 520, 1194
SpeI ACTAGT 1 cut(s) 1394
SphI GCATGC 1 cut(s) 1446
Sse9I AATT 7 cut(s) 116, 612, 639, 958, 982, 1189, 1416
SsiI CCGC 8 cut(s) 216, 258, 290, 301, 722, 724, 1328, 1557
SspMI CTAG 1 cut(s) 1395
SstI GAGCTC 1 cut(s) 339
TaaI ACNGT 6 cut(s) 397, 503, 1027, 1213, 1356, 1388
TaiI ACGT 2 cut(s) 83, 1336
TasI AATT 7 cut(s) 116, 612, 639, 958, 982, 1189, 1416
TatI WGTACW 2 cut(s) 648, 1397
TauI GCSGC 3 cut(s) 218, 724, 1330
TfiI GAWTC 5 cut(s) 249, 353, 526, 1219, 1598
Tru1I TTAA 2 cut(s) 1182, 1271
Tru9I TTAA 2 cut(s) 1182, 1271
TscAI CASTG 3 cut(s) 678, 1030, 1216
TseFI GTSAC 3 cut(s) 166, 904, 922
TseI GCWGC 9 cut(s) 212, 531, 554, 617, 839, 842, 1102, 1342, 1513
Tsp45I GTSAC 3 cut(s) 166, 904, 922
TspDTI ATGAA 4 cut(s) 241, 363, 1160, 1470
TspGWI ACGGA 2 cut(s) 86, 700
TspRI CASTG 3 cut(s) 678, 1030, 1216
Tth111I GACNNNGTC 1 cut(s) 271
VneI GTGCAC 1 cut(s) 76
VpaK11BI GGWCC 1 cut(s) 273
XagI CCTNNNNNAGG 1 cut(s) 1482
XapI RAATTY 1 cut(s) 1416
XceI RCATGY 2 cut(s) 427, 1446
XcmI CCANNNNNNNNNTGG 2 cut(s) 638, 1253
XhoI CTCGAG 2 cut(s) 338, 1194
XspI CTAG 1 cut(s) 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.