AT4G36780

BES1 BZR1 homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0013883
Physical Location & Seq
Reverse (-)
17332269 .. 17334355
2087 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G36780.1

Sequence Viewer

Length: 798 bp
ATGGCCGCCGGAGGAGGAGGAGGAGGAGGAGGATCATCGTCGGGACGTACTCCGACGTGGAAAGAGAGAGAGAACAATAAGAAGAGAGAAAGAAGAAGAAGAGCCATCACTGCTAAGATTTACTCTGGTCTTAGAGCTCAAGGTAACTATAAGCTTCCTAAGCACTGCGATAACAACGAGGTTCTTAAAGCTCTCTGTCTCGAAGCTGGTTGGATCGTCGAAGACGATGGCACCACTTATCGCAAGGGGTTTAAGCCACCAGCATCAGATATTTCAGGAACTCCTACAAACTTCAGCACAAATTCATCAATCCAACCAAGTCCACAATCATCAGCTTTTCCAAGTCCTGCACCTTCGTACCACGGAAGTCCAGTCTCATCATCCTTCCCGAGTCCATCTCGCTATGACGGAAACCCTTCTTCATACCTTCTTCTTCCGTTCCTACACAACATCGCTTCTTCGATTCCTGCTAACCTTCCACCTCTTAGAATATCCAACAGTGCGCCTGTGACTCCTCCGTTGTCATCTCCTACTTCTCGTGGTTCGAAGCGGAAACTTACTTCAGAGCAATTACCAAATGGCGGGTCTTTACACGTTTTGAGACATCCGCTTTTCGCTATCTCTGCTCCATCTAGACTCGTCGTGCTGGTCACCAAACGCCACCTACAATACCGGAATGTGATGAGTCCGAGGAGGATTCGATCGAGGATTCAGGAAGGTGGATCAATTTCCAATCTACTGCTCCTACTTCACCAACATTTAACCTTGTTCAGCAAACTTCTATGGCCATTGATATGA

Protein Analysis

265

Amino Acids

28.78

Weight (kDa)

10.74

Isoelectric Point (pI)

75.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 13 - 137 8.2e-64 BES1/BZR1 plant transcription factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013883)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36780
fragaria_vesca FvH4_1g14040
malus_domestica MD15G1267600.v1.1 MD15G1267800.v1.1
prunus_persica Prupe.7G149000_v2.0.a1
pyrus_communis pycom02g12160 pycom15g23310
rosa_chinensis RchiOBHm_Chr2g0102631
rosa_laevigata RLG00000017158
rosa_multiflora Rmu_sc0003852.1_g000007
rosa_roxburghii Rroxscaffold_2G00140430
rosa_rugosa Rorug02G0108300
rosa_samantha Rh2AG157000 Rh2BG163300 Rh2CG162400 Rh2DG162200
rosa_wichuraiana Rw2G012180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 230
AciI CCGC 4 cut(s) 6, 550, 582, 608
AclWI GGATC 3 cut(s) 40, 221, 730
AcoI YGGCCR 2 cut(s) 3, 785
AcsI RAATTY 1 cut(s) 301
AcuI CTGAAG 2 cut(s) 277, 546
AfaI GTAC 2 cut(s) 49, 359
AfiI CCNNNNNNNGG 1 cut(s) 581
AflIII ACRYGT 1 cut(s) 592
AjiI CACGTC 1 cut(s) 57
AluBI AGCT 5 cut(s) 137, 154, 191, 206, 335
AluI AGCT 5 cut(s) 137, 154, 191, 206, 335
Alw21I GWGCWC 1 cut(s) 139
Alw26I GTCTC 3 cut(s) 203, 379, 595
AlwI GGATC 3 cut(s) 40, 221, 730
Ama87I CYCGRG 1 cut(s) 388
AoxI GGCC 2 cut(s) 3, 785
ApoI RAATTY 1 cut(s) 301
ArsI GACNNNNNNTTYG 2 cut(s) 569, 601
Asp700I GAANNNNTTC 1 cut(s) 415
AspLEI GCGC 1 cut(s) 505
AsuHPI GGTGA 2 cut(s) 643, 743
AsuII TTCGAA 1 cut(s) 545
AvaI CYCGRG 1 cut(s) 388
BaeI ACNNNNGTAYC 2 cut(s) 341, 374
BalI TGGCCA 1 cut(s) 787
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 139
BauI CACGAG 1 cut(s) 537
BbsI GAAGAC 1 cut(s) 228
Bbv12I GWGCWC 1 cut(s) 139
BccI CCATC 4 cut(s) 113, 221, 403, 637
BcoDI GTCTC 3 cut(s) 203, 379, 595
BfaI CTAG 1 cut(s) 633
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BmeT110I CYCGRG 1 cut(s) 388
BmgBI CACGTC 1 cut(s) 57
BmiI GGNNCC 1 cut(s) 232
BmsI GCATC 1 cut(s) 272
BpiI GAAGAC 1 cut(s) 228
BplI GAGNNNNNCTC 2 cut(s) 382, 414
Bpu10I CCTNAGC 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 545
BpuEI CTTGAG 1 cut(s) 123
BsaJI CCNNGG 2 cut(s) 361, 689
BsaWI WCCGGW 1 cut(s) 672
Bsc4I CCNNNNNNNGG 1 cut(s) 581
Bse1I ACTGG 1 cut(s) 371
BseDI CCNNGG 2 cut(s) 361, 689
BseGI GGATG 2 cut(s) 380, 604
BseLI CCNNNNNNNGG 1 cut(s) 581
BseNI ACTGG 1 cut(s) 371
BseRI GAGGAG 8 cut(s) 27, 30, 33, 36, 39, 42, 504, 706
BsgI GTGCAG 1 cut(s) 333
Bsh1285I CGRYCG 1 cut(s) 704
BshFI GGCC 2 cut(s) 5, 787
BshNI GGYRCC 1 cut(s) 230
BsiEI CGRYCG 1 cut(s) 704
BsiHKAI GWGCWC 1 cut(s) 139
BsiHKCI CYCGRG 1 cut(s) 388
BsiSI CCGG 2 cut(s) 9, 673
BslFI GGGAC 1 cut(s) 57
BslI CCNNNNNNNGG 1 cut(s) 581
BsmAI GTCTC 3 cut(s) 203, 379, 595
BsmFI GGGAC 1 cut(s) 57
BsnI GGCC 2 cut(s) 5, 787
BsoBI CYCGRG 1 cut(s) 388
Bsp119I TTCGAA 1 cut(s) 545
Bsp1286I GDGCHC 1 cut(s) 139
Bsp143I GATC 4 cut(s) 32, 213, 701, 722
BspACI CCGC 4 cut(s) 6, 550, 582, 608
BspANI GGCC 2 cut(s) 5, 787
BspLI GGNNCC 1 cut(s) 232
BspPI GGATC 3 cut(s) 40, 221, 730
BspQI GCTCTTC 1 cut(s) 94
BspT104I TTCGAA 1 cut(s) 545
BspT107I GGYRCC 1 cut(s) 230
BsrI ACTGG 1 cut(s) 371
BssECI CCNNGG 2 cut(s) 361, 689
BssMI GATC 4 cut(s) 32, 213, 701, 722
BssSI CACGAG 1 cut(s) 537
Bst2BI CACGAG 1 cut(s) 537
Bst4CI ACNGT 1 cut(s) 500
Bst6I CTCTTC 2 cut(s) 77, 94
BstBI TTCGAA 1 cut(s) 545
BstDEI CTNAG 4 cut(s) 114, 131, 159, 485
BstDSI CCRYGG 1 cut(s) 361
BstEII GGTNACC 1 cut(s) 649
BstF5I GGATG 2 cut(s) 380, 604
BstHHI GCGC 1 cut(s) 505
BstKTI GATC 4 cut(s) 35, 216, 704, 725
BstMAI GTCTC 3 cut(s) 203, 379, 595
BstMBI GATC 4 cut(s) 32, 213, 701, 722
BstMCI CGRYCG 1 cut(s) 704
BstMWI GCNNNNNNNGC 3 cut(s) 110, 160, 623
BstPI GGTNACC 1 cut(s) 649
BstV2I GAAGAC 1 cut(s) 228
BsuRI GGCC 2 cut(s) 5, 787
BtgI CCRYGG 1 cut(s) 361
BtgZI GCGATG 1 cut(s) 436
BtrI CACGTC 1 cut(s) 57
BtsCI GGATG 2 cut(s) 380, 604
BtsI GCAGTG 2 cut(s) 108, 163
BtsIMutI CAGTG 3 cut(s) 108, 163, 505
CfoI GCGC 1 cut(s) 505
Csp6I GTAC 2 cut(s) 48, 358
CviJI RGCY 9 cut(s) 5, 104, 137, 154, 191, 206, 256, 335, 787
CviKI_1 RGCY 9 cut(s) 5, 104, 137, 154, 191, 206, 256, 335, 787
CviQI GTAC 2 cut(s) 48, 358
DdeI CTNAG 4 cut(s) 114, 131, 159, 485
DpnI GATC 4 cut(s) 34, 215, 703, 724
DpnII GATC 4 cut(s) 32, 213, 701, 722
EaeI YGGCCR 2 cut(s) 3, 785
Eam1104I CTCTTC 2 cut(s) 77, 94
EarI CTCTTC 2 cut(s) 77, 94
Ecl136II GAGCTC 1 cut(s) 137
Eco24I GRGCYC 1 cut(s) 139
Eco53kI GAGCTC 1 cut(s) 137
Eco57I CTGAAG 2 cut(s) 277, 546
Eco88I CYCGRG 1 cut(s) 388
Eco91I GGTNACC 1 cut(s) 649
EcoICRI GAGCTC 1 cut(s) 137
EcoO65I GGTNACC 1 cut(s) 649
EcoT38I GRGCYC 1 cut(s) 139
FaiI YATR 5 cut(s) 150, 405, 424, 784, 796
FaqI GGGAC 1 cut(s) 57
FauI CCCGC 1 cut(s) 575
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 2 cut(s) 367, 591
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 633
GlaI GCGC 1 cut(s) 504
GluI GCNGC 1 cut(s) 6
HaeIII GGCC 2 cut(s) 5, 787
HapII CCGG 2 cut(s) 9, 673
HhaI GCGC 1 cut(s) 505
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 7 cut(s) 391, 463, 511, 636, 685, 697, 709
HpaII CCGG 2 cut(s) 9, 673
HphI GGTGA 2 cut(s) 643, 743
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 4 cut(s) 54, 268, 565, 690
Hpy188III TCNNGA 6 cut(s) 42, 200, 276, 388, 633, 713
Hpy8I GTNNAC 1 cut(s) 323
Hpy99I CGWCG 4 cut(s) 43, 58, 221, 644
HpyAV CCTTC 6 cut(s) 363, 394, 426, 437, 485, 710
HpyCH4III ACNGT 1 cut(s) 500
HpyCH4IV ACGT 3 cut(s) 46, 56, 594
HpyCH4V TGCA 1 cut(s) 350
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 160, 623
HpyF3I CTNAG 4 cut(s) 114, 131, 159, 485
HpySE526I ACGT 3 cut(s) 46, 56, 594
HspAI GCGC 1 cut(s) 503
Kzo9I GATC 4 cut(s) 32, 213, 701, 722
LguI GCTCTTC 1 cut(s) 94
LmnI GCTCC 2 cut(s) 631, 747
LweI GCATC 1 cut(s) 272
MaeI CTAG 1 cut(s) 633
MaeII ACGT 3 cut(s) 46, 56, 594
MaeIII GTNAC 3 cut(s) 143, 508, 649
MalI GATC 4 cut(s) 34, 215, 703, 724
MboI GATC 4 cut(s) 32, 213, 701, 722
MboII GAAGA 9 cut(s) 94, 105, 108, 111, 233, 411, 422, 425, 450
MhlI GDGCHC 1 cut(s) 139
MlsI TGGCCA 1 cut(s) 787
MluCI AATT 3 cut(s) 301, 569, 726
MluNI TGGCCA 1 cut(s) 787
MlyI GAGTC 4 cut(s) 400, 505, 630, 694
MmeI TCCRAC 4 cut(s) 77, 191, 337, 519
Mox20I TGGCCA 1 cut(s) 787
MroXI GAANNNNTTC 1 cut(s) 415
MscI TGGCCA 1 cut(s) 787
MseI TTAA 3 cut(s) 186, 252, 761
MslI CAYNNNNRTG 1 cut(s) 793
Msp20I TGGCCA 1 cut(s) 787
MspI CCGG 2 cut(s) 9, 673
MwoI GCNNNNNNNGC 3 cut(s) 110, 160, 623
NdeII GATC 4 cut(s) 32, 213, 701, 722
NlaIV GGNNCC 1 cut(s) 232
NmuCI GTSAC 2 cut(s) 508, 649
NspV TTCGAA 1 cut(s) 545
PciSI GCTCTTC 1 cut(s) 94
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdmI GAANNNNTTC 1 cut(s) 415
PfeI GAWTC 3 cut(s) 463, 697, 709
PkrI GCNGC 1 cut(s) 7
Ple19I CGATCG 1 cut(s) 704
PleI GAGTC 4 cut(s) 399, 505, 630, 693
PpsI GAGTC 4 cut(s) 399, 505, 630, 693
Psp124BI GAGCTC 1 cut(s) 139
PspEI GGTNACC 1 cut(s) 649
PspN4I GGNNCC 1 cut(s) 232
PvuI CGATCG 1 cut(s) 704
RsaI GTAC 2 cut(s) 49, 359
RsaNI GTAC 2 cut(s) 48, 358
RseI CAYNNNNRTG 1 cut(s) 793
SacI GAGCTC 1 cut(s) 139
SapI GCTCTTC 1 cut(s) 94
SaqAI TTAA 3 cut(s) 186, 252, 761
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 4 cut(s) 32, 213, 701, 722
SchI GAGTC 4 cut(s) 400, 505, 630, 694
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 1 cut(s) 272
SfuI TTCGAA 1 cut(s) 545
SmiMI CAYNNNNRTG 1 cut(s) 793
SmlI CTYRAG 1 cut(s) 138
SmoI CTYRAG 1 cut(s) 138
Sse9I AATT 3 cut(s) 301, 569, 726
SsiI CCGC 4 cut(s) 6, 550, 582, 608
SspMI CTAG 1 cut(s) 633
SstI GAGCTC 1 cut(s) 139
TaaI ACNGT 1 cut(s) 500
TaiI ACGT 3 cut(s) 49, 59, 597
TaqI TCGA 6 cut(s) 201, 219, 461, 545, 700, 704
TasI AATT 3 cut(s) 301, 569, 726
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 3 cut(s) 463, 697, 709
Tru1I TTAA 3 cut(s) 186, 252, 761
Tru9I TTAA 3 cut(s) 186, 252, 761
TscAI CASTG 3 cut(s) 115, 170, 505
TseFI GTSAC 2 cut(s) 508, 649
Tsp45I GTSAC 2 cut(s) 508, 649
TspDTI ATGAA 2 cut(s) 294, 411
TspGWI ACGGA 4 cut(s) 378, 423, 426, 507
TspRI CASTG 3 cut(s) 115, 170, 505
XapI RAATTY 1 cut(s) 301
XbaI TCTAGA 1 cut(s) 632
XmnI GAANNNNTTC 1 cut(s) 415
XspI CTAG 1 cut(s) 633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.