DNA-binding domain in plant proteins such as APETALA2 and EREBPs
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G36920 AT4G36920 AT5G67180 |
| fragaria_vesca | FvH4_1g16350 FvH4_1g16350 FvH4_1g16350 FvH4_1g16350 |
| malus_domestica | MD02G1176000.v1.1 MD15G1286400.v1.1 |
| prunus_persica | Prupe.6G231700_v2.0.a1 Prupe.6G231700_v2.0.a1 |
| pyrus_communis | pycom02g14210 pycom15g24970 |
| rosa_chinensis | RchiOBHm_Chr2g0106221 |
| rosa_laevigata | RLG00000000196 RLG00000017480 |
| rosa_multiflora | Rmu_sc0008603.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00137370 |
| rosa_rugosa | Rorug02G0133300 Rorug02G0133400 Rorug02G0133500 |
| rosa_samantha | Rh2AG184600 Rh2BG195000 Rh2CG189600 Rh2DG190900 |
| rosa_wichuraiana | Rw2G014410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 767 |
| AbsI | CCTCGAGG | 1 cut(s) | 654 |
| AccII | CGCG | 1 cut(s) | 302 |
| AciI | CCGC | 9 cut(s) | 219, 300, 302, 324, 545, 964, 1095, 1101, 1121 |
| AclI | AACGTT | 1 cut(s) | 318 |
| AclWI | GGATC | 7 cut(s) | 15, 97, 129, 142, 288, 301, 833 |
| AcsI | RAATTY | 2 cut(s) | 527, 928 |
| AcuI | CTGAAG | 2 cut(s) | 72, 96 |
| AcyI | GRCGYC | 1 cut(s) | 822 |
| AfaI | GTAC | 3 cut(s) | 421, 621, 627 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 205, 429, 1072 |
| AflIII | ACRYGT | 1 cut(s) | 622 |
| AgeI | ACCGGT | 1 cut(s) | 1134 |
| AgsI | TTSAA | 5 cut(s) | 105, 355, 559, 586, 1059 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 599, 631 |
| Alw26I | GTCTC | 1 cut(s) | 1282 |
| AlwI | GGATC | 7 cut(s) | 15, 97, 129, 142, 288, 301, 833 |
| Ama87I | CYCGRG | 3 cut(s) | 243, 501, 654 |
| AoxI | GGCC | 1 cut(s) | 1149 |
| ApoI | RAATTY | 2 cut(s) | 527, 928 |
| AsiGI | ACCGGT | 1 cut(s) | 1134 |
| AspS9I | GGNCC | 2 cut(s) | 371, 1149 |
| AsuC2I | CCSGG | 2 cut(s) | 158, 1074 |
| AsuHPI | GGTGA | 2 cut(s) | 63, 175 |
| AsuII | TTCGAA | 2 cut(s) | 665, 941 |
| AvaI | CYCGRG | 3 cut(s) | 243, 501, 654 |
| AvaII | GGWCC | 1 cut(s) | 371 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 403, 436 |
| BamHI | GGATCC | 1 cut(s) | 134 |
| BanII | GRGCYC | 1 cut(s) | 250 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 603, 612, 635, 644 |
| BccI | CCATC | 5 cut(s) | 125, 195, 199, 423, 1136 |
| BceAI | ACGGC | 5 cut(s) | 232, 314, 334, 809, 829 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 779, 813 |
| BcnI | CCSGG | 2 cut(s) | 158, 1074 |
| BcoDI | GTCTC | 1 cut(s) | 1282 |
| BfaI | CTAG | 2 cut(s) | 284, 780 |
| BfmI | CTRYAG | 2 cut(s) | 1179, 1256 |
| Bme1390I | CCNGG | 2 cut(s) | 158, 1074 |
| Bme18I | GGWCC | 1 cut(s) | 371 |
| BmeT110I | CYCGRG | 3 cut(s) | 243, 501, 654 |
| BmgT120I | GGNCC | 2 cut(s) | 371, 1149 |
| BmiI | GGNNCC | 2 cut(s) | 136, 339 |
| BmrFI | CCNGG | 2 cut(s) | 158, 1074 |
| BmsI | GCATC | 1 cut(s) | 1193 |
| Bpu10I | CCTNAGC | 1 cut(s) | 968 |
| Bpu14I | TTCGAA | 2 cut(s) | 665, 941 |
| BpuMI | CCSGG | 2 cut(s) | 158, 1074 |
| BsaAI | YACGTR | 1 cut(s) | 625 |
| BsaBI | GATNNNNATC | 1 cut(s) | 433 |
| BsaHI | GRCGYC | 1 cut(s) | 822 |
| BsaI | GGTCTC | 1 cut(s) | 1282 |
| BsaJI | CCNNGG | 5 cut(s) | 242, 300, 532, 606, 765 |
| BsaWI | WCCGGW | 4 cut(s) | 290, 422, 1031, 1134 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1222, 1252 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 205, 429, 1072 |
| Bse118I | RCCGGY | 3 cut(s) | 340, 414, 1134 |
| Bse1I | ACTGG | 1 cut(s) | 257 |
| Bse8I | GATNNNNATC | 1 cut(s) | 433 |
| BseDI | CCNNGG | 5 cut(s) | 242, 300, 532, 606, 765 |
| BseGI | GGATG | 1 cut(s) | 978 |
| BseJI | GATNNNNATC | 1 cut(s) | 433 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 205, 429, 1072 |
| BseMII | CTCAG | 4 cut(s) | 192, 404, 982, 1116 |
| BseNI | ACTGG | 1 cut(s) | 257 |
| BseRI | GAGGAG | 3 cut(s) | 1191, 1230, 1269 |
| Bsh1236I | CGCG | 1 cut(s) | 302 |
| BshFI | GGCC | 1 cut(s) | 1151 |
| BshTI | ACCGGT | 1 cut(s) | 1134 |
| BsiHKCI | CYCGRG | 3 cut(s) | 243, 501, 654 |
| BsiSI | CCGG | 9 cut(s) | 157, 291, 341, 415, 423, 1032, 1073, 1118, 1135 |
| BslFI | GGGAC | 1 cut(s) | 461 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 205, 429, 1072 |
| BsmAI | GTCTC | 1 cut(s) | 1282 |
| BsmFI | GGGAC | 1 cut(s) | 461 |
| BsmI | GAATGC | 1 cut(s) | 1041 |
| BsnI | GGCC | 1 cut(s) | 1151 |
| Bso31I | GGTCTC | 1 cut(s) | 1282 |
| BsoBI | CYCGRG | 3 cut(s) | 243, 501, 654 |
| Bsp119I | TTCGAA | 2 cut(s) | 665, 941 |
| Bsp1286I | GDGCHC | 1 cut(s) | 250 |
| Bsp143I | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| BspACI | CCGC | 9 cut(s) | 219, 300, 302, 324, 545, 964, 1095, 1101, 1121 |
| BspANI | GGCC | 1 cut(s) | 1151 |
| BspCNI | CTCAG | 4 cut(s) | 193, 403, 981, 1117 |
| BspFNI | CGCG | 1 cut(s) | 302 |
| BspHI | TCATGA | 1 cut(s) | 1284 |
| BspLI | GGNNCC | 2 cut(s) | 136, 339 |
| BspMAI | CTGCAG | 2 cut(s) | 1183, 1260 |
| BspPI | GGATC | 7 cut(s) | 15, 97, 129, 142, 288, 301, 833 |
| BspQI | GCTCTTC | 1 cut(s) | 115 |
| BspT104I | TTCGAA | 2 cut(s) | 665, 941 |
| BspTNI | GGTCTC | 1 cut(s) | 1282 |
| BsrFI | RCCGGY | 3 cut(s) | 340, 414, 1134 |
| BsrI | ACTGG | 1 cut(s) | 257 |
| BssAI | RCCGGY | 3 cut(s) | 340, 414, 1134 |
| BssECI | CCNNGG | 5 cut(s) | 242, 300, 532, 606, 765 |
| BssMI | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| BssNI | GRCGYC | 1 cut(s) | 822 |
| BssT1I | CCWWGG | 1 cut(s) | 606 |
| Bst4CI | ACNGT | 2 cut(s) | 452, 1113 |
| Bst6I | CTCTTC | 3 cut(s) | 48, 115, 606 |
| BstACI | GRCGYC | 1 cut(s) | 822 |
| BstBAI | YACGTR | 1 cut(s) | 625 |
| BstBI | TTCGAA | 2 cut(s) | 665, 941 |
| BstC8I | GCNNGC | 1 cut(s) | 342 |
| BstDEI | CTNAG | 6 cut(s) | 201, 390, 469, 727, 968, 1125 |
| BstDSI | CCRYGG | 2 cut(s) | 300, 532 |
| BstF5I | GGATG | 1 cut(s) | 978 |
| BstFNI | CGCG | 1 cut(s) | 302 |
| BstKTI | GATC | 8 cut(s) | 10, 92, 137, 283, 296, 380, 841, 904 |
| BstMAI | GTCTC | 1 cut(s) | 1282 |
| BstMBI | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 308, 346, 494, 503, 639, 782 |
| BstSCI | CCNGG | 2 cut(s) | 156, 1072 |
| BstSFI | CTRYAG | 2 cut(s) | 1179, 1256 |
| BstUI | CGCG | 1 cut(s) | 302 |
| BstX2I | RGATCY | 4 cut(s) | 7, 89, 134, 280 |
| BstYI | RGATCY | 4 cut(s) | 7, 89, 134, 280 |
| BsuRI | GGCC | 1 cut(s) | 1151 |
| BtgI | CCRYGG | 2 cut(s) | 300, 532 |
| BtsCI | GGATG | 1 cut(s) | 978 |
| BtsI | GCAGTG | 1 cut(s) | 483 |
| BtsIMutI | CAGTG | 3 cut(s) | 250, 483, 1109 |
| Cac8I | GCNNGC | 1 cut(s) | 342 |
| CciI | TCATGA | 1 cut(s) | 1284 |
| Cfr10I | RCCGGY | 3 cut(s) | 340, 414, 1134 |
| Cfr13I | GGNCC | 2 cut(s) | 371, 1149 |
| Cfr42I | CCGCGG | 1 cut(s) | 303 |
| CseI | GACGC | 2 cut(s) | 26, 830 |
| Csp6I | GTAC | 3 cut(s) | 420, 620, 626 |
| CspAI | ACCGGT | 1 cut(s) | 1134 |
| CviAII | CATG | 2 cut(s) | 491, 1285 |
| CviQI | GTAC | 3 cut(s) | 420, 620, 626 |
| DdeI | CTNAG | 6 cut(s) | 201, 390, 469, 727, 968, 1125 |
| DpnI | GATC | 8 cut(s) | 9, 91, 136, 282, 295, 379, 840, 903 |
| DpnII | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 767 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 767 |
| Eam1104I | CTCTTC | 3 cut(s) | 48, 115, 606 |
| EarI | CTCTTC | 3 cut(s) | 48, 115, 606 |
| EciI | GGCGGA | 1 cut(s) | 1116 |
| Eco130I | CCWWGG | 1 cut(s) | 606 |
| Eco24I | GRGCYC | 1 cut(s) | 250 |
| Eco31I | GGTCTC | 1 cut(s) | 1282 |
| Eco32I | GATATC | 1 cut(s) | 550 |
| Eco47I | GGWCC | 1 cut(s) | 371 |
| Eco57I | CTGAAG | 2 cut(s) | 72, 96 |
| Eco88I | CYCGRG | 3 cut(s) | 243, 501, 654 |
| EcoRV | GATATC | 1 cut(s) | 550 |
| EcoT14I | CCWWGG | 1 cut(s) | 606 |
| EcoT38I | GRGCYC | 1 cut(s) | 250 |
| ErhI | CCWWGG | 1 cut(s) | 606 |
| FaeI | CATG | 2 cut(s) | 494, 1288 |
| FaqI | GGGAC | 1 cut(s) | 461 |
| FatI | CATG | 2 cut(s) | 490, 1284 |
| FauI | CCCGC | 1 cut(s) | 295 |
| FauNDI | CATATG | 1 cut(s) | 508 |
| FokI | GGATG | 1 cut(s) | 985 |
| FriOI | GRGCYC | 1 cut(s) | 250 |
| FspBI | CTAG | 2 cut(s) | 284, 780 |
| HaeIII | GGCC | 1 cut(s) | 1151 |
| HapII | CCGG | 9 cut(s) | 157, 291, 341, 415, 423, 1032, 1073, 1118, 1135 |
| HgaI | GACGC | 2 cut(s) | 26, 830 |
| Hin1I | GRCGYC | 1 cut(s) | 822 |
| Hin1II | CATG | 2 cut(s) | 494, 1288 |
| HincII | GTYRAC | 1 cut(s) | 1170 |
| HindII | GTYRAC | 1 cut(s) | 1170 |
| HinfI | GANTC | 9 cut(s) | 47, 209, 361, 434, 872, 883, 992, 1104, 1194 |
| HpaII | CCGG | 9 cut(s) | 157, 291, 341, 415, 423, 1032, 1073, 1118, 1135 |
| HphI | GGTGA | 2 cut(s) | 63, 175 |
| Hpy166II | GTNNAC | 5 cut(s) | 80, 371, 466, 622, 1170 |
| Hpy188I | TCNGA | 6 cut(s) | 52, 139, 164, 280, 843, 1218 |
| Hpy188III | TCNNGA | 6 cut(s) | 381, 956, 970, 1191, 1285, 1296 |
| Hpy8I | GTNNAC | 5 cut(s) | 80, 371, 466, 622, 1170 |
| Hpy99I | CGWCG | 3 cut(s) | 20, 569, 1159 |
| HpyCH4III | ACNGT | 2 cut(s) | 452, 1113 |
| HpyCH4IV | ACGT | 3 cut(s) | 318, 407, 624 |
| HpyCH4V | TGCA | 5 cut(s) | 494, 688, 800, 1181, 1258 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 308, 346, 494, 503, 639, 782 |
| HpyF3I | CTNAG | 6 cut(s) | 201, 390, 469, 727, 968, 1125 |
| HpySE526I | ACGT | 3 cut(s) | 318, 407, 624 |
| Hsp92I | GRCGYC | 1 cut(s) | 822 |
| Hsp92II | CATG | 2 cut(s) | 494, 1288 |
| KroI | GCCGGC | 1 cut(s) | 340 |
| KroNI | GCCGGC | 1 cut(s) | 342 |
| KspI | CCGCGG | 1 cut(s) | 303 |
| Kzo9I | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| LguI | GCTCTTC | 1 cut(s) | 115 |
| LmnI | GCTCC | 1 cut(s) | 337 |
| LweI | GCATC | 1 cut(s) | 1193 |
| MaeI | CTAG | 2 cut(s) | 284, 780 |
| MaeII | ACGT | 3 cut(s) | 318, 407, 624 |
| MaeIII | GTNAC | 5 cut(s) | 181, 403, 679, 809, 826 |
| MalI | GATC | 8 cut(s) | 9, 91, 136, 282, 295, 379, 840, 903 |
| MboI | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| MboII | GAAGA | 9 cut(s) | 53, 56, 60, 65, 102, 140, 187, 438, 623 |
| MflI | RGATCY | 4 cut(s) | 7, 89, 134, 280 |
| MhlI | GDGCHC | 1 cut(s) | 250 |
| MlyI | GAGTC | 2 cut(s) | 370, 881 |
| MmeI | TCCRAC | 3 cut(s) | 67, 258, 1297 |
| MroNI | GCCGGC | 1 cut(s) | 340 |
| MseI | TTAA | 6 cut(s) | 153, 264, 525, 602, 1041, 1224 |
| MslI | CAYNNNNRTG | 2 cut(s) | 693, 1005 |
| MspA1I | CMGCKG | 3 cut(s) | 116, 302, 326 |
| MspI | CCGG | 9 cut(s) | 157, 291, 341, 415, 423, 1032, 1073, 1118, 1135 |
| MspR9I | CCNGG | 2 cut(s) | 158, 1074 |
| Mva1269I | GAATGC | 1 cut(s) | 1041 |
| MvnI | CGCG | 1 cut(s) | 302 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 308, 346, 494, 503, 639, 782 |
| NaeI | GCCGGC | 1 cut(s) | 342 |
| NciI | CCSGG | 2 cut(s) | 158, 1074 |
| NdeI | CATATG | 1 cut(s) | 508 |
| NdeII | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| NgoMIV | GCCGGC | 1 cut(s) | 340 |
| NlaIII | CATG | 2 cut(s) | 494, 1288 |
| NlaIV | GGNNCC | 2 cut(s) | 136, 339 |
| NmeAIII | GCCGAG | 1 cut(s) | 895 |
| NmuCI | GTSAC | 3 cut(s) | 181, 679, 826 |
| NspV | TTCGAA | 2 cut(s) | 665, 941 |
| PaeR7I | CTCGAG | 2 cut(s) | 501, 654 |
| PagI | TCATGA | 1 cut(s) | 1284 |
| PciSI | GCTCTTC | 1 cut(s) | 115 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 938 |
| PctI | GAATGC | 1 cut(s) | 1041 |
| PdiI | GCCGGC | 1 cut(s) | 342 |
| PfeI | GAWTC | 7 cut(s) | 47, 209, 434, 883, 992, 1104, 1194 |
| PinAI | ACCGGT | 1 cut(s) | 1134 |
| PleI | GAGTC | 2 cut(s) | 369, 880 |
| PpsI | GAGTC | 2 cut(s) | 369, 880 |
| Ppu21I | YACGTR | 1 cut(s) | 625 |
| Psp1406I | AACGTT | 1 cut(s) | 318 |
| PspN4I | GGNNCC | 2 cut(s) | 136, 339 |
| PspPI | GGNCC | 2 cut(s) | 371, 1149 |
| PspXI | VCTCGAGB | 2 cut(s) | 501, 654 |
| PstI | CTGCAG | 2 cut(s) | 1183, 1260 |
| PsuI | RGATCY | 4 cut(s) | 7, 89, 134, 280 |
| PvuII | CAGCTG | 1 cut(s) | 116 |
| RsaI | GTAC | 3 cut(s) | 421, 621, 627 |
| RsaNI | GTAC | 3 cut(s) | 420, 620, 626 |
| RseI | CAYNNNNRTG | 2 cut(s) | 693, 1005 |
| SacII | CCGCGG | 1 cut(s) | 303 |
| SapI | GCTCTTC | 1 cut(s) | 115 |
| SaqAI | TTAA | 6 cut(s) | 153, 264, 525, 602, 1041, 1224 |
| Sau3AI | GATC | 8 cut(s) | 7, 89, 134, 280, 293, 377, 838, 901 |
| Sau96I | GGNCC | 2 cut(s) | 371, 1149 |
| SchI | GAGTC | 2 cut(s) | 370, 881 |
| ScrFI | CCNGG | 2 cut(s) | 158, 1074 |
| SduI | GDGCHC | 1 cut(s) | 250 |
| SfaNI | GCATC | 1 cut(s) | 1193 |
| SfcI | CTRYAG | 2 cut(s) | 1179, 1256 |
| Sfr274I | CTCGAG | 2 cut(s) | 501, 654 |
| Sfr303I | CCGCGG | 1 cut(s) | 303 |
| SfuI | TTCGAA | 2 cut(s) | 665, 941 |
| SgrBI | CCGCGG | 1 cut(s) | 303 |
| SinI | GGWCC | 1 cut(s) | 371 |
| SlaI | CTCGAG | 2 cut(s) | 501, 654 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 693, 1005 |
| SmlI | CTYRAG | 2 cut(s) | 501, 654 |
| SmoI | CTYRAG | 2 cut(s) | 501, 654 |
| SsiI | CCGC | 9 cut(s) | 219, 300, 302, 324, 545, 964, 1095, 1101, 1121 |
| SspMI | CTAG | 2 cut(s) | 284, 780 |
| StyD4I | CCNGG | 2 cut(s) | 156, 1072 |
| StyI | CCWWGG | 1 cut(s) | 606 |
| TaaI | ACNGT | 2 cut(s) | 452, 1113 |
| TaiI | ACGT | 3 cut(s) | 321, 410, 627 |
| TauI | GCSGC | 3 cut(s) | 326, 967, 1124 |
| TfiI | GAWTC | 7 cut(s) | 47, 209, 434, 883, 992, 1104, 1194 |
| Tru1I | TTAA | 6 cut(s) | 153, 264, 525, 602, 1041, 1224 |
| Tru9I | TTAA | 6 cut(s) | 153, 264, 525, 602, 1041, 1224 |
| TscAI | CASTG | 3 cut(s) | 257, 490, 1116 |
| TseFI | GTSAC | 3 cut(s) | 181, 679, 826 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 679, 826 |
| TspDTI | ATGAA | 3 cut(s) | 162, 989, 1023 |
| TspGWI | ACGGA | 1 cut(s) | 521 |
| TspRI | CASTG | 3 cut(s) | 257, 490, 1116 |
| VpaK11BI | GGWCC | 1 cut(s) | 371 |
| XapI | RAATTY | 2 cut(s) | 527, 928 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1139 |
| XhoI | CTCGAG | 2 cut(s) | 501, 654 |
| XspI | CTAG | 2 cut(s) | 284, 780 |