Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006577

Physical Location & Seq

Genomic Coordinates Reverse (-)

26206750 .. 26210129

Gene Structure 3380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1286400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGTGGGATCTCAACGACTCGCCTGATCAGCGGCCACGTGGCGAGGAATCCGAAGGTTGTTCCTCCCAGAAGACATCGGCAGACGGAGACGAGGAAAAGGGCAAACGGGTCGGATCCGTATCCAGTTCAAGCTCGTCGGCGGTGGTCATAGAGGAGGACGGATCAGACGAAGAAGAAGATCAGGACGACGACGGCCCAACCAAGATCGCCAAGAAGCAAGGAGGAGGTGGGGGAGGAGGAGGAAAGATATTCGGGTTCTCCGTGACCCACGAGGAGTCCATGGATAGCGATCCGCCCGTGACCGTCACCAGACAGTTCTTTCCGGTGGAGCAAGACTCCTCCTCTAATTTTGACGTAATGGGGTCCGCAACGGGCGGCGGCAGCATCCCACCACCTCCTTCTACATCATCGTCGTTTCCCCGAGCCCACTGGGTCGGGGTCAATTTCGGGCAGTCTGATTCGGGCAGTCCCGGGAAGCCGCCGCCCACCGCGGAGGCCTCCCACCAGCCCATGAAGAAGAGCCGGCGTGGGCCCCGCTCCAGGAGCTCCCAGTACCGGGGTGTTACGTTTTACCGGAGGACTGGCCGTTGGGAGTCTCATATTTGGGATTGTGGGAAGCAAGTTTATCTTGGTGGATTTGACACAGCGCATGCAGCTGCTCGGGCGTATGATCGGGCGGCGATCAAGTTCCGGGGAGTGGAGGCTGACATAAATTTTAGCATAGAGGATTATGAAGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAGGAGTTTGTGCATGTACTTCGCCGACAAAGCACCGGCTTCCCGAGAGGGAGCTCCAAATATAGAGGGGTCACCTTGCACAAGTGTGGCAGATGGGAGGCCAGGATGGGCCAATTTTTAGGCAAAAAATACGTTTATTTGGGATTGTTTGACACTGAGATTGATGCTGCAAGGGCTTATGACAAAGCAGCAATCAAGTGTAATGGCAAAGAAGCTGTCACTAACTTTGATCCCAGCATCTACGAGAACGAGCTCAACCCCTCTGAATCATCGGGTGTTAATGCTGCGGATCACGACCTTGATTTGAGTTTGGGAAGCTCAAACTCAAAGAAAAACAATCAAGCATTAGGGAATGATAATAACAGCCAAAATGGTGCACTGGAACACCAGCATTCTGTCTCGATGCAATTCGATGCTGATTGGAGGAGTCAAGGATTTCGGCCTAAGCTTAACATACAACGAGATCGATCTAGAGACGACATTGATCCTCAGAGAAGAGACGGGTACTTGGAGAGTGAAGCTCTACTCCGAACCAACCTTCAATCTCAAGTCCCAGCTGAAATGCATAAATATGGGCAGTTCAGTAGTAGGAGGCCTACTGCCGAAGACATTCAAATGCCTCACAATTTCCCACCACATTTCAACTCACCAAATTATCATCATATTCAGTTTCCGAGCAGCAGTGAAGGAGGGGGCCGCATTGGCAGTGATCTTTCACTGTCAATGAGCGACCACCACCAACAATGGCAATCCGCTACTCCGACCTCCGATTTATTTGCAACTGCTGCAGCATCATCAGGATTCCCACCACAAATTAGACCGTCGTACACACAAAACGGCTGGCTGCAGAAAAATGGGTTCCACTCTCTCACCAGACGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

550

Amino Acids

60.54

Weight (kDa)

5.93

Isoelectric Point (pI)

64.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	184 - 232	7.3e-10	AP2 domain
AP2	PF00847	275 - 325	2.9e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36920 AT4G36920 AT5G67180
fragaria_vesca	FvH4_1g16350 FvH4_1g16350 FvH4_1g16350 FvH4_1g16350
malus_domestica	MD02G1176000.v1.1 MD15G1286400.v1.1
prunus_persica	Prupe.6G231700_v2.0.a1 Prupe.6G231700_v2.0.a1
pyrus_communis	pycom02g14210 pycom15g24970
rosa_chinensis	RchiOBHm_Chr2g0106221
rosa_laevigata	RLG00000000196 RLG00000017480
rosa_multiflora	Rmu_sc0008603.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137370
rosa_rugosa	Rorug02G0133300 Rorug02G0133400 Rorug02G0133500
rosa_samantha	Rh2AG184600 Rh2BG195000 Rh2CG189600 Rh2DG190900
rosa_wichuraiana	Rw2G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	537
AccII	CGCG	1 cut(s)	491
AclWI	GGATC	8 cut(s)	15, 108, 121, 169, 284, 992, 1065, 1247
AcoI	YGGCCR	2 cut(s)	32, 583
AcsI	RAATTY	1 cut(s)	712
AcvI	CACGTG	1 cut(s)	38
AfaI	GTAC	4 cut(s)	554, 786, 1274, 1595
AfiI	CCNNNNNNNGG	4 cut(s)	540, 555, 556, 697
AgsI	TTSAA	5 cut(s)	129, 745, 1310, 1382, 1411
AjnI	CCWGG	2 cut(s)	539, 869
AleI	CACNNNNGTG	1 cut(s)	852
Alw21I	GWGCWC	4 cut(s)	548, 824, 1023, 1147
Alw26I	GTCTC	5 cut(s)	81, 600, 1171, 1236, 1260
Alw44I	GTGCAC	1 cut(s)	1143
AlwI	GGATC	8 cut(s)	15, 108, 121, 169, 284, 992, 1065, 1247
Ama87I	CYCGRG	4 cut(s)	420, 470, 660, 811
ApaI	GGGCCC	1 cut(s)	534
ApaLI	GTGCAC	1 cut(s)	1143
ApoI	RAATTY	1 cut(s)	712
ArsI	GACNNNNNNTTYG	2 cut(s)	969, 1001
Asp700I	GAANNNNTTC	1 cut(s)	1377
AspLEI	GCGC	1 cut(s)	649
AspS9I	GGNCC	6 cut(s)	194, 363, 530, 531, 877, 1462
AsuC2I	CCSGG	4 cut(s)	471, 472, 557, 692
AsuHPI	GGTGA	4 cut(s)	298, 832, 1407, 1630
AvaI	CYCGRG	4 cut(s)	420, 470, 660, 811
AvaII	GGWCC	1 cut(s)	363
BaeGI	GKGCMC	2 cut(s)	534, 1147
BamHI	GGATCC	1 cut(s)	113
BanII	GRGCYC	5 cut(s)	427, 534, 548, 824, 1023
BauI	CACGAG	1 cut(s)	269
BbrPI	CACGTG	1 cut(s)	38
BbsI	GAAGAC	3 cut(s)	77, 744, 1380
Bbv12I	GWGCWC	4 cut(s)	548, 824, 1023, 1147
BccI	CCATC	2 cut(s)	855, 868
BceAI	ACGGC	3 cut(s)	208, 570, 1621
BcgI	CGANNNNNNTGC	6 cut(s)	91, 125, 770, 804, 1526, 1560
BciT130I	CCWGG	2 cut(s)	541, 871
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	4 cut(s)	471, 472, 557, 692
BcoDI	GTCTC	5 cut(s)	81, 600, 1171, 1236, 1260
BfaI	CTAG	1 cut(s)	1239
BfmI	CTRYAG	2 cut(s)	1554, 1613
BfuI	GTATCC	1 cut(s)	130
BglI	GCCNNNNNGGC	1 cut(s)	1470
Bme1390I	CCNGG	6 cut(s)	471, 472, 541, 557, 692, 871
Bme18I	GGWCC	1 cut(s)	363
BmeT110I	CYCGRG	4 cut(s)	420, 470, 660, 811
BmgT120I	GGNCC	6 cut(s)	194, 363, 530, 531, 877, 1462
BmiI	GGNNCC	6 cut(s)	115, 364, 532, 533, 1463, 1628
BmrFI	CCNGG	6 cut(s)	471, 472, 541, 557, 692, 871
BmrI	ACTGGG	2 cut(s)	439, 544
BmsI	GCATC	6 cut(s)	393, 922, 1014, 1161, 1171, 1568
BmuI	ACTGGG	2 cut(s)	439, 544
BpiI	GAAGAC	3 cut(s)	77, 744, 1380
BplI	GAGNNNNNCTC	4 cut(s)	320, 352, 1273, 1305
BpmI	CTGGAG	1 cut(s)	523
Bpu10I	CCTNAGC	1 cut(s)	1212
BpuEI	CTTGAG	1 cut(s)	1299
BpuMI	CCSGG	4 cut(s)	471, 472, 557, 692
Bsa29I	ATCGAT	1 cut(s)	1234
BsaAI	YACGTR	1 cut(s)	38
BsaBI	GATNNNNATC	2 cut(s)	118, 288
BsaJI	CCNNGG	5 cut(s)	279, 470, 489, 556, 691
BsaWI	WCCGGW	2 cut(s)	322, 573
Bsc4I	CCNNNNNNNGG	4 cut(s)	540, 555, 556, 697
Bse118I	RCCGGY	2 cut(s)	522, 803
Bse1I	ACTGG	5 cut(s)	123, 434, 550, 586, 1152
Bse8I	GATNNNNATC	2 cut(s)	118, 288
BseBI	CCWGG	2 cut(s)	541, 871
BseCI	ATCGAT	1 cut(s)	1234
BseDI	CCNNGG	5 cut(s)	279, 470, 489, 556, 691
BseGI	GGATG	2 cut(s)	384, 879
BseJI	GATNNNNATC	2 cut(s)	118, 288
BseLI	CCNNNNNNNGG	4 cut(s)	540, 555, 556, 697
BseMII	CTCAG	2 cut(s)	915, 1271
BseNI	ACTGG	5 cut(s)	123, 434, 550, 586, 1152
BseRI	GAGGAG	9 cut(s)	167, 237, 249, 252, 287, 328, 331, 785, 1207
BseSI	GKGCMC	2 cut(s)	534, 1147
BseYI	CCCAGC	2 cut(s)	1001, 1321
Bsh1236I	CGCG	1 cut(s)	491
BshVI	ATCGAT	1 cut(s)	1234
BsiHKAI	GWGCWC	4 cut(s)	548, 824, 1023, 1147
BsiHKCI	CYCGRG	4 cut(s)	420, 470, 660, 811
BsiSI	CCGG	7 cut(s)	323, 471, 523, 556, 574, 691, 804
BslFI	GGGAC	2 cut(s)	453, 1304
BslI	CCNNNNNNNGG	4 cut(s)	540, 555, 556, 697
BsmAI	GTCTC	5 cut(s)	81, 600, 1171, 1236, 1260
BsmBI	CGTCTC	3 cut(s)	81, 1236, 1260
BsmFI	GGGAC	2 cut(s)	453, 1304
BsmI	GAATGC	1 cut(s)	1159
BsoBI	CYCGRG	4 cut(s)	420, 470, 660, 811
Bsp120I	GGGCCC	1 cut(s)	530
Bsp1286I	GDGCHC	6 cut(s)	427, 534, 548, 824, 1023, 1147
Bsp19I	CCATGG	1 cut(s)	279
BspCNI	CTCAG	2 cut(s)	916, 1270
BspDI	ATCGAT	1 cut(s)	1234
BspFNI	CGCG	1 cut(s)	491
BspLI	GGNNCC	6 cut(s)	115, 364, 532, 533, 1463, 1628
BspMAI	CTGCAG	2 cut(s)	1558, 1617
BspPI	GGATC	8 cut(s)	15, 108, 121, 169, 284, 992, 1065, 1247
BspQI	GCTCTTC	1 cut(s)	512
BsrBI	CCGCTC	1 cut(s)	537
BsrFI	RCCGGY	2 cut(s)	522, 803
BsrI	ACTGG	5 cut(s)	123, 434, 550, 586, 1152
BssAI	RCCGGY	2 cut(s)	522, 803
BssECI	CCNNGG	5 cut(s)	279, 470, 489, 556, 691
BssSI	CACGAG	1 cut(s)	269
BssT1I	CCWWGG	1 cut(s)	279
Bst2BI	CACGAG	1 cut(s)	269
Bst2UI	CCWGG	2 cut(s)	541, 871
Bst4CI	ACNGT	4 cut(s)	304, 315, 1488, 1590
Bst6I	CTCTTC	2 cut(s)	512, 1258
BstAPI	GCANNNNNTGC	1 cut(s)	1553
BstBAI	YACGTR	1 cut(s)	38
BstC8I	GCNNGC	3 cut(s)	524, 651, 1610
BstDEI	CTNAG	3 cut(s)	924, 1212, 1257
BstDSI	CCRYGG	2 cut(s)	279, 489
BstEII	GGTNACC	1 cut(s)	838
BstF5I	GGATG	2 cut(s)	384, 879
BstFNI	CGCG	1 cut(s)	491
BstHHI	GCGC	1 cut(s)	649
BstMAI	GTCTC	5 cut(s)	81, 600, 1171, 1236, 1260
BstMWI	GCNNNNNNNGC	9 cut(s)	28, 381, 543, 653, 662, 798, 941, 1470, 1553
BstNI	CCWGG	2 cut(s)	541, 871
BstNSI	RCATGY	2 cut(s)	653, 785
BstPI	GGTNACC	1 cut(s)	838
BstSCI	CCNGG	6 cut(s)	469, 470, 539, 555, 690, 869
BstSFI	CTRYAG	2 cut(s)	1554, 1613
BstSLI	GKGCMC	2 cut(s)	534, 1147
BstUI	CGCG	1 cut(s)	491
BstV2I	GAAGAC	3 cut(s)	77, 744, 1380
BstX2I	RGATCY	2 cut(s)	7, 113
BstYI	RGATCY	2 cut(s)	7, 113
Bsu15I	ATCGAT	1 cut(s)	1234
BsuI	GTATCC	1 cut(s)	130
BsuTUI	ATCGAT	1 cut(s)	1234
BtgI	CCRYGG	2 cut(s)	279, 489
BtsCI	GGATG	2 cut(s)	384, 879
BtsI	GCAGTG	2 cut(s)	1456, 1480
BtsIMutI	CAGTG	6 cut(s)	427, 921, 1145, 1456, 1480, 1484
Cac8I	GCNNGC	3 cut(s)	524, 651, 1610
CfoI	GCGC	1 cut(s)	649
Cfr10I	RCCGGY	2 cut(s)	522, 803
Cfr13I	GGNCC	6 cut(s)	194, 363, 530, 531, 877, 1462
Cfr42I	CCGCGG	1 cut(s)	492
Cfr9I	CCCGGG	1 cut(s)	470
ClaI	ATCGAT	1 cut(s)	1234
Csp6I	GTAC	4 cut(s)	553, 785, 1273, 1594
CviAII	CATG	4 cut(s)	280, 511, 650, 782
CviQI	GTAC	4 cut(s)	553, 785, 1273, 1594
DdeI	CTNAG	3 cut(s)	924, 1212, 1257
EaeI	YGGCCR	2 cut(s)	32, 583
Eam1104I	CTCTTC	2 cut(s)	512, 1258
EarI	CTCTTC	2 cut(s)	512, 1258
EciI	GGCGGA	1 cut(s)	282
Ecl136II	GAGCTC	3 cut(s)	546, 822, 1021
Eco130I	CCWWGG	1 cut(s)	279
Eco147I	AGGCCT	2 cut(s)	497, 1363
Eco24I	GRGCYC	5 cut(s)	427, 534, 548, 824, 1023
Eco47I	GGWCC	1 cut(s)	363
Eco53kI	GAGCTC	3 cut(s)	546, 822, 1021
Eco72I	CACGTG	1 cut(s)	38
Eco88I	CYCGRG	4 cut(s)	420, 470, 660, 811
Eco91I	GGTNACC	1 cut(s)	838
EcoICRI	GAGCTC	3 cut(s)	546, 822, 1021
EcoO109I	RGGNCCY	1 cut(s)	531
EcoO65I	GGTNACC	1 cut(s)	838
EcoRII	CCWGG	2 cut(s)	539, 869
EcoT14I	CCWWGG	1 cut(s)	279
EcoT22I	ATGCAT	1 cut(s)	1335
EcoT38I	GRGCYC	5 cut(s)	427, 534, 548, 824, 1023
ErhI	CCWWGG	1 cut(s)	279
Esp3I	CGTCTC	3 cut(s)	81, 1236, 1260
FaeI	CATG	4 cut(s)	283, 514, 653, 785
FalI	AAGNNNNNCTT	2 cut(s)	612, 644
FaqI	GGGAC	2 cut(s)	453, 1304
FatI	CATG	4 cut(s)	279, 510, 649, 781
FauI	CCCGC	1 cut(s)	542
FbaI	TGATCA	1 cut(s)	25
FokI	GGATG	2 cut(s)	371, 886
FriOI	GRGCYC	5 cut(s)	427, 534, 548, 824, 1023
FspBI	CTAG	1 cut(s)	1239
GlaI	GCGC	1 cut(s)	648
GsaI	CCCAGC	2 cut(s)	1005, 1325
GsuI	CTGGAG	1 cut(s)	523
HapII	CCGG	7 cut(s)	323, 471, 523, 556, 574, 691, 804
HhaI	GCGC	1 cut(s)	649
Hin1II	CATG	4 cut(s)	283, 514, 653, 785
Hin6I	GCGC	1 cut(s)	647
HinP1I	GCGC	1 cut(s)	647
HindIII	AAGCTT	1 cut(s)	1214
HinfI	GANTC	9 cut(s)	17, 47, 275, 335, 458, 593, 1034, 1195, 1569
HpaII	CCGG	7 cut(s)	323, 471, 523, 556, 574, 691, 804
HphI	GGTGA	4 cut(s)	298, 832, 1407, 1630
Hpy166II	GTNNAC	2 cut(s)	1145, 1596
Hpy188III	TCNNGA	6 cut(s)	182, 811, 1061, 1168, 1239, 1566
Hpy8I	GTNNAC	2 cut(s)	1145, 1596
Hpy99I	CGWCG	5 cut(s)	139, 191, 194, 415, 1594
HpyAV	CCTTC	4 cut(s)	47, 408, 1316, 1448
HpyCH4III	ACNGT	4 cut(s)	304, 315, 1488, 1590
HpyCH4IV	ACGT	4 cut(s)	37, 354, 566, 900
HpyF10VI	GCNNNNNNNGC	9 cut(s)	28, 381, 543, 653, 662, 798, 941, 1470, 1553
HpyF3I	CTNAG	3 cut(s)	924, 1212, 1257
HpySE526I	ACGT	4 cut(s)	37, 354, 566, 900
Hsp92II	CATG	4 cut(s)	283, 514, 653, 785
HspAI	GCGC	1 cut(s)	647
KroI	GCCGGC	1 cut(s)	522
KroNI	GCCGGC	1 cut(s)	524
Ksp22I	TGATCA	1 cut(s)	25
KspI	CCGCGG	1 cut(s)	492
LguI	GCTCTTC	1 cut(s)	512
LmnI	GCTCC	6 cut(s)	328, 542, 543, 551, 819, 827
LweI	GCATC	6 cut(s)	393, 922, 1014, 1161, 1171, 1568
MaeI	CTAG	1 cut(s)	1239
MaeII	ACGT	4 cut(s)	37, 354, 566, 900
MaeIII	GTNAC	6 cut(s)	262, 298, 304, 562, 838, 985
MbiI	CCGCTC	1 cut(s)	537
MflI	RGATCY	2 cut(s)	7, 113
MhlI	GDGCHC	6 cut(s)	427, 534, 548, 824, 1023, 1147
MluCI	AATT	9 cut(s)	346, 442, 712, 757, 881, 1175, 1393, 1420, 1581
MlyI	GAGTC	5 cut(s)	11, 284, 329, 602, 1204
MmeI	TCCRAC	2 cut(s)	91, 1553
Mph1103I	ATGCAT	1 cut(s)	1335
MroNI	GCCGGC	1 cut(s)	522
MroXI	GAANNNNTTC	1 cut(s)	1377
MseI	TTAA	3 cut(s)	761, 1047, 1218
MslI	CAYNNNNRTG	3 cut(s)	852, 1338, 1382
MspA1I	CMGCKG	4 cut(s)	31, 491, 656, 1325
MspI	CCGG	7 cut(s)	323, 471, 523, 556, 574, 691, 804
MspR9I	CCNGG	6 cut(s)	471, 472, 541, 557, 692, 871
Mva1269I	GAATGC	1 cut(s)	1159
MvaI	CCWGG	2 cut(s)	541, 871
MvnI	CGCG	1 cut(s)	491
MwoI	GCNNNNNNNGC	9 cut(s)	28, 381, 543, 653, 662, 798, 941, 1470, 1553
NaeI	GCCGGC	1 cut(s)	524
NciI	CCSGG	4 cut(s)	471, 472, 557, 692
NcoI	CCATGG	1 cut(s)	279
NgoMIV	GCCGGC	1 cut(s)	522
NlaIII	CATG	4 cut(s)	283, 514, 653, 785
NlaIV	GGNNCC	6 cut(s)	115, 364, 532, 533, 1463, 1628
NmuCI	GTSAC	5 cut(s)	262, 298, 304, 838, 985
NsiI	ATGCAT	1 cut(s)	1335
NspI	RCATGY	2 cut(s)	653, 785
OliI	CACNNNNGTG	1 cut(s)	852
PaeI	GCATGC	1 cut(s)	653
PceI	AGGCCT	2 cut(s)	497, 1363
PciSI	GCTCTTC	1 cut(s)	512
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 258
PctI	GAATGC	1 cut(s)	1159
PdiI	GCCGGC	1 cut(s)	524
PdmI	GAANNNNTTC	1 cut(s)	1377
PfeI	GAWTC	4 cut(s)	47, 458, 1034, 1569
PfoI	TCCNGGA	1 cut(s)	539
PleI	GAGTC	5 cut(s)	11, 283, 329, 601, 1203
PmaCI	CACGTG	1 cut(s)	38
PmlI	CACGTG	1 cut(s)	38
PpsI	GAGTC	5 cut(s)	11, 283, 329, 601, 1203
Ppu21I	YACGTR	1 cut(s)	38
Psp124BI	GAGCTC	3 cut(s)	548, 824, 1023
Psp6I	CCWGG	2 cut(s)	539, 869
PspCI	CACGTG	1 cut(s)	38
PspEI	GGTNACC	1 cut(s)	838
PspFI	CCCAGC	2 cut(s)	1001, 1321
PspGI	CCWGG	2 cut(s)	539, 869
PspN4I	GGNNCC	6 cut(s)	115, 364, 532, 533, 1463, 1628
PspOMI	GGGCCC	1 cut(s)	530
PspPI	GGNCC	6 cut(s)	194, 363, 530, 531, 877, 1462
PstI	CTGCAG	2 cut(s)	1558, 1617
PsuI	RGATCY	2 cut(s)	7, 113
PvuII	CAGCTG	2 cut(s)	656, 1325
RsaI	GTAC	4 cut(s)	554, 786, 1274, 1595
RsaNI	GTAC	4 cut(s)	553, 785, 1273, 1594
RseI	CAYNNNNRTG	3 cut(s)	852, 1338, 1382
SacI	GAGCTC	3 cut(s)	548, 824, 1023
SacII	CCGCGG	1 cut(s)	492
SapI	GCTCTTC	1 cut(s)	512
SaqAI	TTAA	3 cut(s)	761, 1047, 1218
Sau96I	GGNCC	6 cut(s)	194, 363, 530, 531, 877, 1462
SchI	GAGTC	5 cut(s)	11, 284, 329, 602, 1204
ScrFI	CCNGG	6 cut(s)	471, 472, 541, 557, 692, 871
SduI	GDGCHC	6 cut(s)	427, 534, 548, 824, 1023, 1147
SfaNI	GCATC	6 cut(s)	393, 922, 1014, 1161, 1171, 1568
SfcI	CTRYAG	2 cut(s)	1554, 1613
Sfr303I	CCGCGG	1 cut(s)	492
SgrBI	CCGCGG	1 cut(s)	492
SinI	GGWCC	1 cut(s)	363
SmaI	CCCGGG	1 cut(s)	472
SmiMI	CAYNNNNRTG	3 cut(s)	852, 1338, 1382
SmlI	CTYRAG	1 cut(s)	1314
SmoI	CTYRAG	1 cut(s)	1314
SphI	GCATGC	1 cut(s)	653
Sse9I	AATT	9 cut(s)	346, 442, 712, 757, 881, 1175, 1393, 1420, 1581
SseBI	AGGCCT	2 cut(s)	497, 1363
SspMI	CTAG	1 cut(s)	1239
SstI	GAGCTC	3 cut(s)	548, 824, 1023
StuI	AGGCCT	2 cut(s)	497, 1363
StyD4I	CCNGG	6 cut(s)	469, 470, 539, 555, 690, 869
StyI	CCWWGG	1 cut(s)	279
TaaI	ACNGT	4 cut(s)	304, 315, 1488, 1590
TaiI	ACGT	4 cut(s)	40, 357, 569, 903
TaqI	TCGA	3 cut(s)	1169, 1179, 1234
TasI	AATT	9 cut(s)	346, 442, 712, 757, 881, 1175, 1393, 1420, 1581
TatI	WGTACW	1 cut(s)	784
TauI	GCSGC	7 cut(s)	34, 378, 381, 481, 484, 680, 1467
TfiI	GAWTC	4 cut(s)	47, 458, 1034, 1569
Tru1I	TTAA	3 cut(s)	761, 1047, 1218
Tru9I	TTAA	3 cut(s)	761, 1047, 1218
TscAI	CASTG	6 cut(s)	434, 928, 1152, 1456, 1480, 1491
TseFI	GTSAC	5 cut(s)	262, 298, 304, 838, 985
Tsp45I	GTSAC	5 cut(s)	262, 298, 304, 838, 985
TspDTI	ATGAA	2 cut(s)	527, 747
TspGWI	ACGGA	4 cut(s)	99, 106, 174, 250
TspMI	CCCGGG	1 cut(s)	470
TspRI	CASTG	6 cut(s)	434, 928, 1152, 1456, 1480, 1491
VneI	GTGCAC	1 cut(s)	1143
VpaK11BI	GGWCC	1 cut(s)	363
XapI	RAATTY	1 cut(s)	712
XbaI	TCTAGA	1 cut(s)	1238
XceI	RCATGY	2 cut(s)	653, 785
XmaI	CCCGGG	1 cut(s)	470
XmnI	GAANNNNTTC	1 cut(s)	1377
XspI	CTAG	1 cut(s)	1239
Zsp2I	ATGCAT	1 cut(s)	1335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.