Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0006577

Physical Location & Seq

Genomic Coordinates Reverse (-)

17351665 .. 17356726

Gene Structure 5062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG190900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGTGGGATCTCAATGACTCTCCTGATCAGAGACCAGTGGACGATGAATCCGAAGGCTGCTCTTCGCAGAAGACCAACTCCGGCGACGGAGACGACGACAAGGGCAAGAGGGTCGGATCCGTGTCCAATTCCAGCTCATCCGCCGTGGTCATCGAGGACGGATCGGACGTCGACGAAGACGCCTACCCCAACGCCAACAGGAAGCGCGGGAGCAAGATATTCGGGTTCTCCGTCACCGACGACGACGTCGACGGCGCTGATCCGCAGCCAGTGACCCGGCAGTTCTTCCCGATGGACGAATCCTCCGAAATGGAACCGACACGGGCCGGCGGAGCTGTGGGAGCAGCGGCTGCTTCGCCTTCTTCTTCTTTCCCGCGGGCCCACTGGGTCGGAGTCAAGTTCTGCCAGGCGGACTCAGGCGGGCCCGGAAAAGCAGCGGAGCCGTCGCCGCAGCAGCAACAACAGCCGATGAAGAAGAGCCGGCGTGGACCCCGGTCGAGGAGCTCACAGTACAGAGGGGTGACGTTTTACCGGAGGACCGGCCGTTGGGAATCCCATATATGGGATTGCGGGAAGCAAGTTTATCTTGGTGGATTCGACACAGCACATGCAGCTGCTCGAGCTTACGATAGAGCGGCGATCAAGTTCAGGGGAGTAGAGGCTGACATAAATTTTAACATTGACGACTATGAAGAAGACTTGAAACAGATGAGCAATTTAACAAAGGAGGAATTTGTGCATGTACTTCGCCGACAAAGTACCGGGTTCCCTAGAGGTAGCTCGAAATATAGAGGAGTGACTTTGCATAAGTGTGGAAGATGGGAGGCTCGGATGGGCCAGTTTTTAGGCAAAAAGTACGTCTATTTGGGATTGTTTGATACAGAGATTGATGCAGCAAGGGCCTATGACAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACTAACTTTGATCCCAGCATTTATGAGAGTGAGCTGAACTCAACTGAGCCTTCTAGTATTAATGCAGCAGATCACAATCTGGATTTGAGTTTGGGAAATTCAAAATCGAAGAAGAATAACCCGGCTTTTGGGACTGCACAAAATCACACCCATCAAAATGCTGCAATGGAACAGCAACAGCAGCCGTCTGCCTCTATGCAATTCGAAGCCGATTGGAGGAACAATCAAGGATTTCGGCCCAAGGTTTATATTAACTGTGACTTTAAATTCTTTCTAAATTCCATGCTACCACTAATTAAAATTTTGGTGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

419

Amino Acids

46.48

Weight (kDa)

6.12

Isoelectric Point (pI)

48.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	170 - 218	5.1e-10	AP2 domain
AP2	PF00847	261 - 311	2e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36920 AT4G36920 AT5G67180
fragaria_vesca	FvH4_1g16350 FvH4_1g16350 FvH4_1g16350 FvH4_1g16350
malus_domestica	MD02G1176000.v1.1 MD15G1286400.v1.1
prunus_persica	Prupe.6G231700_v2.0.a1 Prupe.6G231700_v2.0.a1
pyrus_communis	pycom02g14210 pycom15g24970
rosa_chinensis	RchiOBHm_Chr2g0106221
rosa_laevigata	RLG00000000196 RLG00000017480
rosa_multiflora	Rmu_sc0008603.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137370
rosa_rugosa	Rorug02G0133300 Rorug02G0133400 Rorug02G0133500
rosa_samantha	Rh2AG184600 Rh2BG195000 Rh2CG189600 Rh2DG190900
rosa_wichuraiana	Rw2G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	245
AatII	GACGTC	2 cut(s)	171, 249
AccBSI	CCGCTC	1 cut(s)	635
AccI	GTMKAC	2 cut(s)	171, 249
AccII	CGCG	2 cut(s)	207, 376
AclWI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 950
AcoI	YGGCCR	1 cut(s)	541
AcsI	RAATTY	6 cut(s)	670, 731, 1042, 1211, 1222, 1245
AcyI	GRCGYC	3 cut(s)	168, 180, 246
AfaI	GTAC	5 cut(s)	512, 744, 760, 857, 1256
AfiI	CCNNNNNNNGG	6 cut(s)	498, 546, 561, 562, 1073, 1161
AgsI	TTSAA	2 cut(s)	703, 1047
AjnI	CCWGG	1 cut(s)	405
AluBI	AGCT	9 cut(s)	135, 335, 504, 614, 623, 780, 914, 941, 979
AluI	AGCT	9 cut(s)	135, 335, 504, 614, 623, 780, 914, 941, 979
Alw21I	GWGCWC	1 cut(s)	506
Alw26I	GTCTC	2 cut(s)	25, 84
AlwI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 950
AlwNI	CAGNNNCTG	1 cut(s)	350
Ama87I	CYCGRG	1 cut(s)	618
AoxI	GGCC	7 cut(s)	324, 378, 422, 541, 835, 900, 1181
ApaI	GGGCCC	2 cut(s)	382, 426
ApoI	RAATTY	6 cut(s)	670, 731, 1042, 1211, 1222, 1245
ArsI	GACNNNNNNTTYG	4 cut(s)	843, 875, 927, 959
AseI	ATTAAT	1 cut(s)	1005
AspLEI	GCGC	2 cut(s)	207, 257
AsuC2I	CCSGG	5 cut(s)	277, 426, 493, 763, 1067
AsuHPI	GGTGA	2 cut(s)	226, 532
AsuII	TTCGAA	1 cut(s)	1149
AvaI	CYCGRG	1 cut(s)	618
AvaII	GGWCC	2 cut(s)	488, 537
BaeGI	GKGCMC	2 cut(s)	382, 426
BamHI	GGATCC	1 cut(s)	116
BanII	GRGCYC	3 cut(s)	382, 426, 506
BbsI	GAAGAC	3 cut(s)	77, 183, 702
Bbv12I	GWGCWC	1 cut(s)	506
BccI	CCATC	4 cut(s)	286, 813, 826, 1104
BceAI	ACGGC	5 cut(s)	128, 268, 427, 528, 1114
BcgI	CGANNNNNNTGC	6 cut(s)	94, 128, 202, 236, 728, 762
BciT130I	CCWGG	1 cut(s)	407
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	5 cut(s)	277, 426, 493, 763, 1067
BcoDI	GTCTC	2 cut(s)	25, 84
BfaI	CTAG	2 cut(s)	771, 999
BfoI	RGCGCY	1 cut(s)	258
Bme1390I	CCNGG	6 cut(s)	277, 407, 426, 493, 763, 1067
Bme18I	GGWCC	2 cut(s)	488, 537
BmeT110I	CYCGRG	1 cut(s)	618
BmiI	GGNNCC	7 cut(s)	118, 315, 380, 424, 441, 490, 767
BmrFI	CCNGG	6 cut(s)	277, 407, 426, 493, 763, 1067
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	1 cut(s)	880
BmuI	ACTGGG	1 cut(s)	394
BoxI	GACNNNNGTC	1 cut(s)	493
BpiI	GAAGAC	3 cut(s)	77, 183, 702
BplI	GAGNNNNNCTC	2 cut(s)	968, 1000
Bpu14I	TTCGAA	1 cut(s)	1149
BpuMI	CCSGG	5 cut(s)	277, 426, 493, 763, 1067
BsaBI	GATNNNNATC	1 cut(s)	1020
BsaHI	GRCGYC	3 cut(s)	168, 180, 246
BsaI	GGTCTC	1 cut(s)	25
BsaJI	CCNNGG	4 cut(s)	144, 374, 491, 1185
BsaWI	WCCGGW	1 cut(s)	531
BsaXI	ACNNNNNCTCC	2 cut(s)	287, 317
Bsc4I	CCNNNNNNNGG	6 cut(s)	498, 546, 561, 562, 1073, 1161
Bse118I	RCCGGY	3 cut(s)	326, 480, 539
Bse1I	ACTGG	4 cut(s)	35, 269, 389, 838
Bse3DI	GCAATG	1 cut(s)	1116
Bse8I	GATNNNNATC	1 cut(s)	1020
BseBI	CCWGG	1 cut(s)	407
BseDI	CCNNGG	4 cut(s)	144, 374, 491, 1185
BseGI	GGATG	2 cut(s)	137, 837
BseJI	GATNNNNATC	1 cut(s)	1020
BseLI	CCNNNNNNNGG	6 cut(s)	498, 546, 561, 562, 1073, 1161
BseMI	GCAATG	1 cut(s)	1116
BseMII	CTCAG	2 cut(s)	429, 981
BseNI	ACTGG	4 cut(s)	35, 269, 389, 838
BseRI	GAGGAG	2 cut(s)	514, 807
BseSI	GKGCMC	2 cut(s)	382, 426
BseX3I	CGGCCG	1 cut(s)	541
BseYI	CCCAGC	1 cut(s)	959
BsgI	GTGCAG	1 cut(s)	1065
Bsh1236I	CGCG	2 cut(s)	207, 376
Bsh1285I	CGRYCG	2 cut(s)	497, 544
BshFI	GGCC	7 cut(s)	326, 380, 424, 543, 837, 902, 1183
BsiEI	CGRYCG	2 cut(s)	497, 544
BsiHKAI	GWGCWC	1 cut(s)	506
BsiHKCI	CYCGRG	1 cut(s)	618
BslFI	GGGAC	1 cut(s)	1090
BslI	CCNNNNNNNGG	6 cut(s)	498, 546, 561, 562, 1073, 1161
BsmAI	GTCTC	2 cut(s)	25, 84
BsmBI	CGTCTC	1 cut(s)	84
BsmFI	GGGAC	1 cut(s)	1090
BsnI	GGCC	7 cut(s)	326, 380, 424, 543, 837, 902, 1183
Bso31I	GGTCTC	1 cut(s)	25
BsoBI	CYCGRG	1 cut(s)	618
Bsp119I	TTCGAA	1 cut(s)	1149
Bsp120I	GGGCCC	2 cut(s)	378, 422
Bsp1286I	GDGCHC	3 cut(s)	382, 426, 506
Bsp143I	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
BspANI	GGCC	7 cut(s)	326, 380, 424, 543, 837, 902, 1183
BspCNI	CTCAG	2 cut(s)	428, 982
BspFNI	CGCG	2 cut(s)	207, 376
BspLI	GGNNCC	7 cut(s)	118, 315, 380, 424, 441, 490, 767
BspPI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 950
BspQI	GCTCTTC	2 cut(s)	67, 470
BspT104I	TTCGAA	1 cut(s)	1149
BspTNI	GGTCTC	1 cut(s)	25
BsrBI	CCGCTC	1 cut(s)	635
BsrDI	GCAATG	1 cut(s)	1116
BsrFI	RCCGGY	3 cut(s)	326, 480, 539
BsrI	ACTGG	4 cut(s)	35, 269, 389, 838
BssAI	RCCGGY	3 cut(s)	326, 480, 539
BssECI	CCNNGG	4 cut(s)	144, 374, 491, 1185
BssMI	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
BssNI	GRCGYC	3 cut(s)	168, 180, 246
BssT1I	CCWWGG	1 cut(s)	1185
Bst2UI	CCWGG	1 cut(s)	407
Bst4CI	ACNGT	2 cut(s)	510, 1202
Bst6I	CTCTTC	2 cut(s)	67, 470
BstACI	GRCGYC	3 cut(s)	168, 180, 246
BstAPI	GCANNNNNTGC	1 cut(s)	350
BstBI	TTCGAA	1 cut(s)	1149
BstC8I	GCNNGC	4 cut(s)	328, 378, 422, 482
BstDEI	CTNAG	2 cut(s)	415, 990
BstDSI	CCRYGG	2 cut(s)	144, 374
BstF5I	GGATG	2 cut(s)	137, 837
BstFNI	CGCG	2 cut(s)	207, 376
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	2 cut(s)	207, 257
BstKTI	GATC	8 cut(s)	10, 28, 119, 164, 262, 642, 958, 1018
BstMAI	GTCTC	2 cut(s)	25, 84
BstMBI	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
BstMCI	CGRYCG	2 cut(s)	497, 544
BstNI	CCWGG	1 cut(s)	407
BstNSI	RCATGY	2 cut(s)	611, 743
BstPAI	GACNNNNGTC	1 cut(s)	493
BstSCI	CCNGG	6 cut(s)	275, 405, 424, 491, 761, 1065
BstSLI	GKGCMC	2 cut(s)	382, 426
BstUI	CGCG	2 cut(s)	207, 376
BstV2I	GAAGAC	3 cut(s)	77, 183, 702
BstX2I	RGATCY	2 cut(s)	7, 116
BstYI	RGATCY	2 cut(s)	7, 116
BstZI	CGGCCG	1 cut(s)	541
BsuRI	GGCC	7 cut(s)	326, 380, 424, 543, 837, 902, 1183
BtgI	CCRYGG	2 cut(s)	144, 374
BtsCI	GGATG	2 cut(s)	137, 837
BtsIMutI	CAGTG	3 cut(s)	42, 276, 382
Cac8I	GCNNGC	4 cut(s)	328, 378, 422, 482
CaiI	CAGNNNCTG	1 cut(s)	350
CfoI	GCGC	2 cut(s)	207, 257
Cfr10I	RCCGGY	3 cut(s)	326, 480, 539
Cfr42I	CCGCGG	1 cut(s)	377
CseI	GACGC	1 cut(s)	188
Csp6I	GTAC	5 cut(s)	511, 743, 759, 856, 1255
CviAII	CATG	3 cut(s)	608, 740, 1228
CviQI	GTAC	5 cut(s)	511, 743, 759, 856, 1255
DdeI	CTNAG	2 cut(s)	415, 990
DpnI	GATC	8 cut(s)	9, 27, 118, 163, 261, 641, 957, 1017
DpnII	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
DraI	TTTAAA	1 cut(s)	1210
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	541
EagI	CGGCCG	1 cut(s)	541
Eam1104I	CTCTTC	2 cut(s)	67, 470
EarI	CTCTTC	2 cut(s)	67, 470
EciI	GGCGGA	3 cut(s)	130, 345, 425
Ecl136II	GAGCTC	1 cut(s)	504
EclXI	CGGCCG	1 cut(s)	541
Eco130I	CCWWGG	1 cut(s)	1185
Eco24I	GRGCYC	3 cut(s)	382, 426, 506
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	2 cut(s)	488, 537
Eco52I	CGGCCG	1 cut(s)	541
Eco53kI	GAGCTC	1 cut(s)	504
Eco88I	CYCGRG	1 cut(s)	618
EcoICRI	GAGCTC	1 cut(s)	504
EcoO109I	RGGNCCY	1 cut(s)	900
EcoRII	CCWGG	1 cut(s)	405
EcoT14I	CCWWGG	1 cut(s)	1185
EcoT38I	GRGCYC	3 cut(s)	382, 426, 506
ErhI	CCWWGG	1 cut(s)	1185
Esp3I	CGTCTC	1 cut(s)	84
FaeI	CATG	3 cut(s)	611, 743, 1231
FalI	AAGNNNNNCTT	2 cut(s)	570, 602
FaqI	GGGAC	1 cut(s)	1090
FatI	CATG	3 cut(s)	607, 739, 1227
FauI	CCCGC	5 cut(s)	200, 369, 381, 413, 563
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	2 cut(s)	171, 249
FokI	GGATG	2 cut(s)	124, 844
FriOI	GRGCYC	3 cut(s)	382, 426, 506
FspBI	CTAG	2 cut(s)	771, 999
GlaI	GCGC	2 cut(s)	206, 256
GsaI	CCCAGC	1 cut(s)	963
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	7 cut(s)	326, 380, 424, 543, 837, 902, 1183
HgaI	GACGC	1 cut(s)	188
HhaI	GCGC	2 cut(s)	207, 257
Hin1I	GRCGYC	3 cut(s)	168, 180, 246
Hin1II	CATG	3 cut(s)	611, 743, 1231
Hin6I	GCGC	2 cut(s)	205, 255
HinP1I	GCGC	2 cut(s)	205, 255
HincII	GTYRAC	2 cut(s)	172, 250
HindII	GTYRAC	2 cut(s)	172, 250
HinfI	GANTC	7 cut(s)	17, 47, 299, 393, 413, 551, 594
HphI	GGTGA	2 cut(s)	226, 532
Hpy166II	GTNNAC	5 cut(s)	40, 172, 250, 488, 1255
Hpy188I	TCNGA	7 cut(s)	30, 52, 116, 166, 307, 392, 831
Hpy188III	TCNNGA	3 cut(s)	23, 289, 1025
Hpy8I	GTNNAC	5 cut(s)	40, 172, 250, 488, 1255
HpyAV	CCTTC	3 cut(s)	47, 369, 1005
HpyCH4III	ACNGT	2 cut(s)	510, 1202
HpyCH4IV	ACGT	4 cut(s)	168, 246, 524, 858
HpyCH4V	TGCA	9 cut(s)	611, 739, 805, 893, 917, 1010, 1082, 1109, 1144
HpyF3I	CTNAG	2 cut(s)	415, 990
HpySE526I	ACGT	4 cut(s)	168, 246, 524, 858
Hsp92I	GRCGYC	3 cut(s)	168, 180, 246
Hsp92II	CATG	3 cut(s)	611, 743, 1231
HspAI	GCGC	2 cut(s)	205, 255
KroI	GCCGGC	2 cut(s)	326, 480
KroNI	GCCGGC	2 cut(s)	328, 482
Ksp22I	TGATCA	1 cut(s)	25
KspI	CCGCGG	1 cut(s)	377
Kzo9I	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
LguI	GCTCTTC	2 cut(s)	67, 470
LmnI	GCTCC	5 cut(s)	210, 332, 341, 439, 501
LweI	GCATC	1 cut(s)	880
MaeI	CTAG	2 cut(s)	771, 999
MaeII	ACGT	4 cut(s)	168, 246, 524, 858
MaeIII	GTNAC	6 cut(s)	232, 271, 520, 796, 943, 1202
MalI	GATC	8 cut(s)	9, 27, 118, 163, 261, 641, 957, 1017
MbiI	CCGCTC	1 cut(s)	635
MboI	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
MflI	RGATCY	2 cut(s)	7, 116
MhlI	GDGCHC	3 cut(s)	382, 426, 506
MlyI	GAGTC	3 cut(s)	11, 402, 407
MmeI	TCCRAC	2 cut(s)	94, 370
MroNI	GCCGGC	2 cut(s)	326, 480
MseI	TTAA	6 cut(s)	675, 719, 1005, 1197, 1209, 1242
MslI	CAYNNNNRTG	2 cut(s)	810, 1101
MspA1I	CMGCKG	4 cut(s)	347, 376, 437, 614
MspR9I	CCNGG	6 cut(s)	277, 407, 426, 493, 763, 1067
MvaI	CCWGG	1 cut(s)	407
MvnI	CGCG	2 cut(s)	207, 376
NaeI	GCCGGC	2 cut(s)	328, 482
NciI	CCSGG	5 cut(s)	277, 426, 493, 763, 1067
NdeII	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
NgoMIV	GCCGGC	2 cut(s)	326, 480
NlaIII	CATG	3 cut(s)	611, 743, 1231
NlaIV	GGNNCC	7 cut(s)	118, 315, 380, 424, 441, 490, 767
NmuCI	GTSAC	6 cut(s)	232, 271, 520, 796, 943, 1202
NspI	RCATGY	2 cut(s)	611, 743
NspV	TTCGAA	1 cut(s)	1149
PaeR7I	CTCGAG	1 cut(s)	618
PciSI	GCTCTTC	2 cut(s)	67, 470
PcsI	WCGNNNNNNNCGW	6 cut(s)	48, 93, 165, 228, 246, 303
PdiI	GCCGGC	2 cut(s)	328, 482
PfeI	GAWTC	4 cut(s)	47, 299, 551, 594
PflFI	GACNNNGTC	1 cut(s)	245
PleI	GAGTC	3 cut(s)	11, 401, 407
PpsI	GAGTC	3 cut(s)	11, 401, 407
PshAI	GACNNNNGTC	1 cut(s)	493
PshBI	ATTAAT	1 cut(s)	1005
Psp124BI	GAGCTC	1 cut(s)	506
Psp6I	CCWGG	1 cut(s)	405
PspFI	CCCAGC	1 cut(s)	959
PspGI	CCWGG	1 cut(s)	405
PspN4I	GGNNCC	7 cut(s)	118, 315, 380, 424, 441, 490, 767
PspOMI	GGGCCC	2 cut(s)	378, 422
PspXI	VCTCGAGB	1 cut(s)	618
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	2 cut(s)	7, 116
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	5 cut(s)	512, 744, 760, 857, 1256
RsaNI	GTAC	5 cut(s)	511, 743, 759, 856, 1255
RseI	CAYNNNNRTG	2 cut(s)	810, 1101
SacI	GAGCTC	1 cut(s)	506
SacII	CCGCGG	1 cut(s)	377
SalI	GTCGAC	2 cut(s)	170, 248
SapI	GCTCTTC	2 cut(s)	67, 470
SaqAI	TTAA	6 cut(s)	675, 719, 1005, 1197, 1209, 1242
Sau3AI	GATC	8 cut(s)	7, 25, 116, 161, 259, 639, 955, 1015
SchI	GAGTC	3 cut(s)	11, 402, 407
ScrFI	CCNGG	6 cut(s)	277, 407, 426, 493, 763, 1067
SduI	GDGCHC	3 cut(s)	382, 426, 506
SfaNI	GCATC	1 cut(s)	880
Sfr274I	CTCGAG	1 cut(s)	618
Sfr303I	CCGCGG	1 cut(s)	377
SfuI	TTCGAA	1 cut(s)	1149
SgrBI	CCGCGG	1 cut(s)	377
SgrDI	CGTCGACG	2 cut(s)	170, 248
SinI	GGWCC	2 cut(s)	488, 537
SlaI	CTCGAG	1 cut(s)	618
SmiMI	CAYNNNNRTG	2 cut(s)	810, 1101
SmlI	CTYRAG	1 cut(s)	618
SmoI	CTYRAG	1 cut(s)	618
SspMI	CTAG	2 cut(s)	771, 999
SstI	GAGCTC	1 cut(s)	506
StyD4I	CCNGG	6 cut(s)	275, 405, 424, 491, 761, 1065
StyI	CCWWGG	1 cut(s)	1185
TaaI	ACNGT	2 cut(s)	510, 1202
TaiI	ACGT	4 cut(s)	171, 249, 527, 861
TaqI	TCGA	9 cut(s)	153, 171, 249, 497, 597, 619, 782, 1052, 1149
TatI	WGTACW	3 cut(s)	510, 742, 1254
TauI	GCSGC	3 cut(s)	350, 451, 638
TfiI	GAWTC	4 cut(s)	47, 299, 551, 594
Tru1I	TTAA	6 cut(s)	675, 719, 1005, 1197, 1209, 1242
Tru9I	TTAA	6 cut(s)	675, 719, 1005, 1197, 1209, 1242
TscAI	CASTG	3 cut(s)	42, 276, 389
TseFI	GTSAC	6 cut(s)	232, 271, 520, 796, 943, 1202
Tsp45I	GTSAC	6 cut(s)	232, 271, 520, 796, 943, 1202
TspDTI	ATGAA	3 cut(s)	60, 485, 705
TspGWI	ACGGA	4 cut(s)	102, 109, 174, 220
TspRI	CASTG	3 cut(s)	42, 276, 389
Tth111I	GACNNNGTC	1 cut(s)	245
VpaK11BI	GGWCC	2 cut(s)	488, 537
VspI	ATTAAT	1 cut(s)	1005
XapI	RAATTY	6 cut(s)	670, 731, 1042, 1211, 1222, 1245
XceI	RCATGY	2 cut(s)	611, 743
XhoI	CTCGAG	1 cut(s)	618
XmiI	GTMKAC	2 cut(s)	171, 249
XspI	CTAG	2 cut(s)	771, 999
ZraI	GACGTC	2 cut(s)	169, 247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.