Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006577

Physical Location & Seq

Genomic Coordinates Forward (+)

75110075 .. 75114185

Gene Structure 4111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00137370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGTGGGATCTCAATGACTCTCCTGATCAGAGACCAGTGGACGATGAATCCGAAGGCTGCTCTTCGCAGAAGACCAACTCCTGCGACGGAGACGACGACAAGGGCAAGAGGGTCGGATCCGTGTCCAATTCCAGCTCATCCGCCGTGGTCATCGAGGACGGATCAGACGTCGACGAAGACGCCTACCCCAACGCCAACAGGAAGCGCGGGAGCAAGATATTCGGGTTCTCCGTCACCGACGACGACGTCGACGGCGCTGATCCGCAGCCCGTGACCCGGCAGTTCTTCCCGATGGACGAATCCTCCGAAATGGAACCCACACGGGCCGGCGGAGCTGTGGGAGCAGCGGCTGCTTCGCCTTCTTCTTCTTTCCCGCGGGCCCACTGGGTTGGAGTCAAGTTCTGCCAGGCGGACTCGGGCGGGCCCGGAAAAGCAGCGGAGCCGTCGCCGCAGCAGCAGCAGCAGCAACAACAGCCGATGAAGAAGAGCCGGCGTGGGCCCCGGTCGAGGAGCTCACAGTACAGAGGGGTGACGTTTTACCGGAGGACCGGCCGTTGGGAATCCCATATATGGGATTGCGGGAAGCAAGTTTATCTTGGTGGATTCGACACAGCACATGCAGCTGCTCGAGCTTATGATAGAGCGGCGATCAAGTTCAGGGGAGTAGAGGCTGACATAAATTTTAACATTGAAGACTATGAAGAAGACTTGAAACAGATGAGCAATTTAACAAAGGAGGAATTTGTGCATGTACTTCGCCGACAAAGTACCGGGTTCCCTAGAGGTAGCTCGAAATATAGAGGAGTGACTTTGCATAAGTGTGGAAGATGGGAGGCTCGGATGGGCCAATTTTTAGGCAAAAAGTACGTCTATTTGGGATTGTTTGATACAGAGATTGATGCAGCAAGGGCCTATGACAAAGCTGCAATCAAGTGTAATGGCAAAGAAGCTGTCACTAACTTTGATCCCAGCATTTATGAGAGTGAGCTGAACTCAACTGAGCCTTCTAGTATTAATGCAGGAGATCACAATCTGGATTTGAGTTTGGGAAATTCAAAATCGAAGAAGAATAACCCGGCTTTTGGGACTGCACAAAATCACACCCATCAAAATGCTGCAATGGAACAACAACTGCAGCCGTCTGCCTCTATGCAATTCGAAGCCGATTGGAGGAGCAATCAAGGATTTCGGCCCAAGCCTAGAGAGGATAATGACCTGCGTAGAAGAGATGGGTACCTGGAGAATGAAACCATGCAGCTTCTGCTCCGTACAAACCTCCAATCTCCATCCCCGACTCAAATGCACAAGTACGGGCAGTTTAATCAGCTCCGAAACCCTGCCGGAGAGACGCCGGCACAAATGCCTCACCATTTTCCTCCACATACTTTTAACCCACCAAATTATCAAATTCAGTTTCCGAGCAGCAGCGAGGTCGGAGCGCACATTGGGAGTGATCTCACACTGTCTATGAGTGATCGACAACAATGGCAATCGGGTCATCCGTCCGAGTTATTTTTAAATGCTGCAGCATCATCAGGATTCCCACCGCAAATTAGACCACCTTCACAAAATGGCTGGCTGCAGAAAAATAACGGGTTCCACACTCTCGCTAGGCGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0010073 GO:0010093 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048444 GO:0048449 GO:0048467 GO:0048481 GO:0048507 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

540

Amino Acids

60.09

Weight (kDa)

6.45

Isoelectric Point (pI)

63.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	173 - 221	7.2e-10	AP2 domain
AP2	PF00847	264 - 314	2.9e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36920 AT4G36920 AT5G67180
fragaria_vesca	FvH4_1g16350 FvH4_1g16350 FvH4_1g16350 FvH4_1g16350
malus_domestica	MD02G1176000.v1.1 MD15G1286400.v1.1
prunus_persica	Prupe.6G231700_v2.0.a1 Prupe.6G231700_v2.0.a1
pyrus_communis	pycom02g14210 pycom15g24970
rosa_chinensis	RchiOBHm_Chr2g0106221
rosa_laevigata	RLG00000000196 RLG00000017480
rosa_multiflora	Rmu_sc0008603.1_g000005
rosa_roxburghii	Rroxscaffold_2G00137370
rosa_rugosa	Rorug02G0133300 Rorug02G0133400 Rorug02G0133500
rosa_samantha	Rh2AG184600 Rh2BG195000 Rh2CG189600 Rh2DG190900
rosa_wichuraiana	Rw2G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	245
AatII	GACGTC	2 cut(s)	171, 249
Acc36I	ACCTGC	1 cut(s)	1224
Acc65I	GGTACC	1 cut(s)	1233
AccB1I	GGYRCC	1 cut(s)	1233
AccBSI	CCGCTC	1 cut(s)	644
AccI	GTMKAC	2 cut(s)	171, 249
AccII	CGCG	2 cut(s)	207, 376
AclWI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 959
AcoI	YGGCCR	1 cut(s)	550
AcsI	RAATTY	4 cut(s)	679, 740, 1051, 1407
AcyI	GRCGYC	4 cut(s)	168, 180, 246, 1349
AfaI	GTAC	7 cut(s)	521, 753, 769, 866, 1235, 1270, 1310
AfiI	CCNNNNNNNGG	7 cut(s)	276, 507, 555, 570, 571, 1082, 1170
AgsI	TTSAA	3 cut(s)	692, 712, 1056
AjnI	CCWGG	2 cut(s)	405, 1236
Alw21I	GWGCWC	1 cut(s)	515
Alw26I	GTCTC	3 cut(s)	25, 84, 1340
AlwI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 959
AlwNI	CAGNNNCTG	2 cut(s)	350, 1261
Ama87I	CYCGRG	2 cut(s)	415, 627
AoxI	GGCC	8 cut(s)	324, 378, 422, 497, 550, 844, 909, 1190
ApaI	GGGCCC	3 cut(s)	382, 426, 501
ApoI	RAATTY	4 cut(s)	679, 740, 1051, 1407
ArsI	GACNNNNNNTTYG	4 cut(s)	852, 884, 936, 968
AseI	ATTAAT	1 cut(s)	1014
Asp718I	GGTACC	1 cut(s)	1233
AspLEI	GCGC	4 cut(s)	207, 257, 1441, 1617
AsuC2I	CCSGG	5 cut(s)	277, 426, 502, 772, 1076
AsuHPI	GGTGA	3 cut(s)	226, 541, 1358
AsuII	TTCGAA	1 cut(s)	1158
AvaI	CYCGRG	2 cut(s)	415, 627
AvaII	GGWCC	1 cut(s)	546
BaeGI	GKGCMC	3 cut(s)	382, 426, 501
BamHI	GGATCC	1 cut(s)	116
BanI	GGYRCC	1 cut(s)	1233
BanII	GRGCYC	4 cut(s)	382, 426, 501, 515
BbsI	GAAGAC	4 cut(s)	77, 183, 699, 711
Bbv12I	GWGCWC	1 cut(s)	515
BccI	CCATC	6 cut(s)	286, 822, 835, 1113, 1223, 1294
BceAI	ACGGC	5 cut(s)	128, 268, 427, 537, 1123
BciT130I	CCWGG	2 cut(s)	407, 1238
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	5 cut(s)	277, 426, 502, 772, 1076
BcoDI	GTCTC	3 cut(s)	25, 84, 1340
BfaI	CTAG	4 cut(s)	780, 1008, 1200, 1611
BfmI	CTRYAG	3 cut(s)	1133, 1524, 1580
BfoI	RGCGCY	1 cut(s)	258
BfuAI	ACCTGC	1 cut(s)	1224
Bme1390I	CCNGG	7 cut(s)	277, 407, 426, 502, 772, 1076, 1238
Bme18I	GGWCC	1 cut(s)	546
BmeT110I	CYCGRG	2 cut(s)	415, 627
BmrFI	CCNGG	7 cut(s)	277, 407, 426, 502, 772, 1076, 1238
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	2 cut(s)	889, 1538
BmuI	ACTGGG	1 cut(s)	394
BpiI	GAAGAC	4 cut(s)	77, 183, 699, 711
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	1 cut(s)	1259
Bpu14I	TTCGAA	1 cut(s)	1158
BpuMI	CCSGG	5 cut(s)	277, 426, 502, 772, 1076
BsaBI	GATNNNNATC	1 cut(s)	1029
BsaHI	GRCGYC	4 cut(s)	168, 180, 246, 1349
BsaI	GGTCTC	1 cut(s)	25
BsaJI	CCNNGG	3 cut(s)	144, 374, 500
BsaWI	WCCGGW	1 cut(s)	540
BsaXI	ACNNNNNCTCC	2 cut(s)	287, 317
Bsc4I	CCNNNNNNNGG	7 cut(s)	276, 507, 555, 570, 571, 1082, 1170
Bse118I	RCCGGY	4 cut(s)	326, 489, 548, 1351
Bse1I	ACTGG	2 cut(s)	35, 389
Bse3DI	GCAATG	1 cut(s)	1125
Bse8I	GATNNNNATC	1 cut(s)	1029
BseBI	CCWGG	2 cut(s)	407, 1238
BseDI	CCNNGG	3 cut(s)	144, 374, 500
BseGI	GGATG	4 cut(s)	137, 846, 1286, 1498
BseJI	GATNNNNATC	1 cut(s)	1029
BseLI	CCNNNNNNNGG	7 cut(s)	276, 507, 555, 570, 571, 1082, 1170
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	1 cut(s)	990
BseNI	ACTGG	2 cut(s)	35, 389
BseRI	GAGGAG	3 cut(s)	523, 816, 1186
BseSI	GKGCMC	3 cut(s)	382, 426, 501
BseX3I	CGGCCG	1 cut(s)	550
BseYI	CCCAGC	1 cut(s)	968
BsgI	GTGCAG	1 cut(s)	1074
Bsh1236I	CGCG	2 cut(s)	207, 376
Bsh1285I	CGRYCG	2 cut(s)	506, 553
BshFI	GGCC	8 cut(s)	326, 380, 424, 499, 552, 846, 911, 1192
BshNI	GGYRCC	1 cut(s)	1233
BsiEI	CGRYCG	2 cut(s)	506, 553
BsiHKAI	GWGCWC	1 cut(s)	515
BsiHKCI	CYCGRG	2 cut(s)	415, 627
BslFI	GGGAC	1 cut(s)	1099
BslI	CCNNNNNNNGG	7 cut(s)	276, 507, 555, 570, 571, 1082, 1170
BsmAI	GTCTC	3 cut(s)	25, 84, 1340
BsmBI	CGTCTC	2 cut(s)	84, 1340
BsmFI	GGGAC	1 cut(s)	1099
BsnI	GGCC	8 cut(s)	326, 380, 424, 499, 552, 846, 911, 1192
Bso31I	GGTCTC	1 cut(s)	25
BsoBI	CYCGRG	2 cut(s)	415, 627
Bsp119I	TTCGAA	1 cut(s)	1158
Bsp120I	GGGCCC	3 cut(s)	378, 422, 497
Bsp1286I	GDGCHC	4 cut(s)	382, 426, 501, 515
BspANI	GGCC	8 cut(s)	326, 380, 424, 499, 552, 846, 911, 1192
BspCNI	CTCAG	1 cut(s)	991
BspFNI	CGCG	2 cut(s)	207, 376
BspMAI	CTGCAG	3 cut(s)	1137, 1528, 1584
BspMI	ACCTGC	1 cut(s)	1224
BspPI	GGATC	6 cut(s)	15, 111, 124, 169, 254, 959
BspQI	GCTCTTC	2 cut(s)	67, 479
BspT104I	TTCGAA	1 cut(s)	1158
BspT107I	GGYRCC	1 cut(s)	1233
BspTNI	GGTCTC	1 cut(s)	25
BsrBI	CCGCTC	1 cut(s)	644
BsrDI	GCAATG	1 cut(s)	1125
BsrFI	RCCGGY	4 cut(s)	326, 489, 548, 1351
BsrI	ACTGG	2 cut(s)	35, 389
BssAI	RCCGGY	4 cut(s)	326, 489, 548, 1351
BssECI	CCNNGG	3 cut(s)	144, 374, 500
BssNI	GRCGYC	4 cut(s)	168, 180, 246, 1349
Bst2UI	CCWGG	2 cut(s)	407, 1238
Bst4CI	ACNGT	2 cut(s)	519, 1464
Bst6I	CTCTTC	3 cut(s)	67, 479, 1219
BstACI	GRCGYC	4 cut(s)	168, 180, 246, 1349
BstAPI	GCANNNNNTGC	2 cut(s)	350, 1261
BstBI	TTCGAA	1 cut(s)	1158
BstC8I	GCNNGC	6 cut(s)	328, 378, 422, 491, 1353, 1577
BstDEI	CTNAG	1 cut(s)	999
BstDSI	CCRYGG	2 cut(s)	144, 374
BstF5I	GGATG	4 cut(s)	137, 846, 1286, 1498
BstFNI	CGCG	2 cut(s)	207, 376
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	4 cut(s)	207, 257, 1441, 1617
BstMAI	GTCTC	3 cut(s)	25, 84, 1340
BstMCI	CGRYCG	2 cut(s)	506, 553
BstNI	CCWGG	2 cut(s)	407, 1238
BstNSI	RCATGY	2 cut(s)	620, 752
BstSCI	CCNGG	7 cut(s)	275, 405, 424, 500, 770, 1074, 1236
BstSFI	CTRYAG	3 cut(s)	1133, 1524, 1580
BstSLI	GKGCMC	3 cut(s)	382, 426, 501
BstUI	CGCG	2 cut(s)	207, 376
BstV2I	GAAGAC	4 cut(s)	77, 183, 699, 711
BstX2I	RGATCY	2 cut(s)	7, 116
BstXI	CCANNNNNNTGG	1 cut(s)	389
BstYI	RGATCY	2 cut(s)	7, 116
BstZI	CGGCCG	1 cut(s)	550
BsuRI	GGCC	8 cut(s)	326, 380, 424, 499, 552, 846, 911, 1192
BtgI	CCRYGG	2 cut(s)	144, 374
BtsCI	GGATG	4 cut(s)	137, 846, 1286, 1498
BtsIMutI	CAGTG	3 cut(s)	42, 382, 1460
BveI	ACCTGC	1 cut(s)	1224
Cac8I	GCNNGC	6 cut(s)	328, 378, 422, 491, 1353, 1577
CaiI	CAGNNNCTG	2 cut(s)	350, 1261
CfoI	GCGC	4 cut(s)	207, 257, 1441, 1617
Cfr10I	RCCGGY	4 cut(s)	326, 489, 548, 1351
Cfr42I	CCGCGG	1 cut(s)	377
CseI	GACGC	2 cut(s)	188, 1357
Csp6I	GTAC	7 cut(s)	520, 752, 768, 865, 1234, 1269, 1309
CviAII	CATG	3 cut(s)	617, 749, 1252
CviQI	GTAC	7 cut(s)	520, 752, 768, 865, 1234, 1269, 1309
DdeI	CTNAG	1 cut(s)	999
DraI	TTTAAA	1 cut(s)	1518
DrdI	GACNNNNNNGTC	1 cut(s)	245
DseDI	GACNNNNNNGTC	1 cut(s)	245
EaeI	YGGCCR	1 cut(s)	550
EagI	CGGCCG	1 cut(s)	550
Eam1104I	CTCTTC	3 cut(s)	67, 479, 1219
EarI	CTCTTC	3 cut(s)	67, 479, 1219
EciI	GGCGGA	3 cut(s)	130, 345, 425
Ecl136II	GAGCTC	1 cut(s)	513
EclXI	CGGCCG	1 cut(s)	550
Eco24I	GRGCYC	4 cut(s)	382, 426, 501, 515
Eco31I	GGTCTC	1 cut(s)	25
Eco47I	GGWCC	1 cut(s)	546
Eco52I	CGGCCG	1 cut(s)	550
Eco53kI	GAGCTC	1 cut(s)	513
Eco88I	CYCGRG	2 cut(s)	415, 627
EcoICRI	GAGCTC	1 cut(s)	513
EcoO109I	RGGNCCY	2 cut(s)	498, 909
EcoRII	CCWGG	2 cut(s)	405, 1236
EcoT38I	GRGCYC	4 cut(s)	382, 426, 501, 515
Esp3I	CGTCTC	2 cut(s)	84, 1340
FaeI	CATG	3 cut(s)	620, 752, 1255
FalI	AAGNNNNNCTT	2 cut(s)	579, 611
FaqI	GGGAC	1 cut(s)	1099
FatI	CATG	3 cut(s)	616, 748, 1251
FauI	CCCGC	5 cut(s)	200, 369, 381, 413, 572
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	2 cut(s)	171, 249
FokI	GGATG	4 cut(s)	124, 853, 1273, 1485
FriOI	GRGCYC	4 cut(s)	382, 426, 501, 515
FspBI	CTAG	4 cut(s)	780, 1008, 1200, 1611
GlaI	GCGC	4 cut(s)	206, 256, 1440, 1616
GsaI	CCCAGC	1 cut(s)	972
GsuI	CTGGAG	1 cut(s)	1259
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	8 cut(s)	326, 380, 424, 499, 552, 846, 911, 1192
HgaI	GACGC	2 cut(s)	188, 1357
HhaI	GCGC	4 cut(s)	207, 257, 1441, 1617
Hin1I	GRCGYC	4 cut(s)	168, 180, 246, 1349
Hin1II	CATG	3 cut(s)	620, 752, 1255
Hin6I	GCGC	4 cut(s)	205, 255, 1439, 1615
HinP1I	GCGC	4 cut(s)	205, 255, 1439, 1615
HincII	GTYRAC	2 cut(s)	172, 250
HindII	GTYRAC	2 cut(s)	172, 250
HinfI	GANTC	9 cut(s)	17, 47, 299, 393, 413, 560, 603, 1294, 1539
HphI	GGTGA	3 cut(s)	226, 541, 1358
Hpy166II	GTNNAC	3 cut(s)	40, 172, 250
Hpy188III	TCNNGA	4 cut(s)	23, 289, 1034, 1536
Hpy8I	GTNNAC	3 cut(s)	40, 172, 250
HpyAV	CCTTC	4 cut(s)	47, 369, 1014, 1572
HpyCH4III	ACNGT	2 cut(s)	519, 1464
HpyCH4IV	ACGT	4 cut(s)	168, 246, 533, 867
HpyF3I	CTNAG	1 cut(s)	999
HpySE526I	ACGT	4 cut(s)	168, 246, 533, 867
Hsp92I	GRCGYC	4 cut(s)	168, 180, 246, 1349
Hsp92II	CATG	3 cut(s)	620, 752, 1255
HspAI	GCGC	4 cut(s)	205, 255, 1439, 1615
KpnI	GGTACC	1 cut(s)	1237
KroI	GCCGGC	3 cut(s)	326, 489, 1351
KroNI	GCCGGC	3 cut(s)	328, 491, 1353
Ksp22I	TGATCA	1 cut(s)	25
KspI	CCGCGG	1 cut(s)	377
LguI	GCTCTTC	2 cut(s)	67, 479
LmnI	GCTCC	9 cut(s)	210, 332, 341, 439, 510, 1173, 1269, 1332, 1436
LweI	GCATC	2 cut(s)	889, 1538
MaeI	CTAG	4 cut(s)	780, 1008, 1200, 1611
MaeII	ACGT	4 cut(s)	168, 246, 533, 867
MaeIII	GTNAC	5 cut(s)	232, 271, 529, 805, 952
MbiI	CCGCTC	1 cut(s)	644
MflI	RGATCY	2 cut(s)	7, 116
MhlI	GDGCHC	4 cut(s)	382, 426, 501, 515
MlyI	GAGTC	4 cut(s)	11, 402, 407, 1288
MmeI	TCCRAC	3 cut(s)	94, 370, 1414
MroNI	GCCGGC	3 cut(s)	326, 489, 1351
MseI	TTAA	6 cut(s)	684, 728, 1014, 1320, 1389, 1517
MslI	CAYNNNNRTG	2 cut(s)	819, 1110
MspA1I	CMGCKG	4 cut(s)	347, 376, 437, 623
MspR9I	CCNGG	7 cut(s)	277, 407, 426, 502, 772, 1076, 1238
MvaI	CCWGG	2 cut(s)	407, 1238
MvnI	CGCG	2 cut(s)	207, 376
NaeI	GCCGGC	3 cut(s)	328, 491, 1353
NciI	CCSGG	5 cut(s)	277, 426, 502, 772, 1076
NgoMIV	GCCGGC	3 cut(s)	326, 489, 1351
NlaIII	CATG	3 cut(s)	620, 752, 1255
NmuCI	GTSAC	5 cut(s)	232, 271, 529, 805, 952
NspI	RCATGY	2 cut(s)	620, 752
NspV	TTCGAA	1 cut(s)	1158
PaeR7I	CTCGAG	1 cut(s)	627
PciSI	GCTCTTC	2 cut(s)	67, 479
PcsI	WCGNNNNNNNCGW	7 cut(s)	48, 93, 165, 228, 246, 303, 1499
PdiI	GCCGGC	3 cut(s)	328, 491, 1353
PfeI	GAWTC	5 cut(s)	47, 299, 560, 603, 1539
PflFI	GACNNNGTC	1 cut(s)	245
PleI	GAGTC	4 cut(s)	11, 401, 407, 1288
PpsI	GAGTC	4 cut(s)	11, 401, 407, 1288
PshBI	ATTAAT	1 cut(s)	1014
Psp124BI	GAGCTC	1 cut(s)	515
Psp6I	CCWGG	2 cut(s)	405, 1236
PspFI	CCCAGC	1 cut(s)	968
PspGI	CCWGG	2 cut(s)	405, 1236
PspOMI	GGGCCC	3 cut(s)	378, 422, 497
PspXI	VCTCGAGB	1 cut(s)	627
PstI	CTGCAG	3 cut(s)	1137, 1528, 1584
PstNI	CAGNNNCTG	2 cut(s)	350, 1261
PsuI	RGATCY	2 cut(s)	7, 116
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	623
RsaI	GTAC	7 cut(s)	521, 753, 769, 866, 1235, 1270, 1310
RsaNI	GTAC	7 cut(s)	520, 752, 768, 865, 1234, 1269, 1309
RseI	CAYNNNNRTG	2 cut(s)	819, 1110
SacI	GAGCTC	1 cut(s)	515
SacII	CCGCGG	1 cut(s)	377
SalI	GTCGAC	2 cut(s)	170, 248
SapI	GCTCTTC	2 cut(s)	67, 479
SaqAI	TTAA	6 cut(s)	684, 728, 1014, 1320, 1389, 1517
SchI	GAGTC	4 cut(s)	11, 402, 407, 1288
ScrFI	CCNGG	7 cut(s)	277, 407, 426, 502, 772, 1076, 1238
SduI	GDGCHC	4 cut(s)	382, 426, 501, 515
SfaNI	GCATC	2 cut(s)	889, 1538
SfcI	CTRYAG	3 cut(s)	1133, 1524, 1580
Sfr274I	CTCGAG	1 cut(s)	627
Sfr303I	CCGCGG	1 cut(s)	377
SfuI	TTCGAA	1 cut(s)	1158
SgrBI	CCGCGG	1 cut(s)	377
SgrDI	CGTCGACG	2 cut(s)	170, 248
SinI	GGWCC	1 cut(s)	546
SlaI	CTCGAG	1 cut(s)	627
SmiMI	CAYNNNNRTG	2 cut(s)	819, 1110
SmlI	CTYRAG	1 cut(s)	627
SmoI	CTYRAG	1 cut(s)	627
SspMI	CTAG	4 cut(s)	780, 1008, 1200, 1611
SstI	GAGCTC	1 cut(s)	515
StyD4I	CCNGG	7 cut(s)	275, 405, 424, 500, 770, 1074, 1236
TaaI	ACNGT	2 cut(s)	519, 1464
TaiI	ACGT	4 cut(s)	171, 249, 536, 870
TatI	WGTACW	2 cut(s)	519, 751
TauI	GCSGC	3 cut(s)	350, 451, 647
TfiI	GAWTC	5 cut(s)	47, 299, 560, 603, 1539
Tru1I	TTAA	6 cut(s)	684, 728, 1014, 1320, 1389, 1517
Tru9I	TTAA	6 cut(s)	684, 728, 1014, 1320, 1389, 1517
TscAI	CASTG	3 cut(s)	42, 389, 1467
TseFI	GTSAC	5 cut(s)	232, 271, 529, 805, 952
Tsp45I	GTSAC	5 cut(s)	232, 271, 529, 805, 952
TspDTI	ATGAA	4 cut(s)	60, 494, 714, 1260
TspGWI	ACGGA	6 cut(s)	102, 109, 174, 220, 1256, 1491
TspRI	CASTG	3 cut(s)	42, 389, 1467
Tth111I	GACNNNGTC	1 cut(s)	245
VpaK11BI	GGWCC	1 cut(s)	546
VspI	ATTAAT	1 cut(s)	1014
XapI	RAATTY	4 cut(s)	679, 740, 1051, 1407
XceI	RCATGY	2 cut(s)	620, 752
XhoI	CTCGAG	1 cut(s)	627
XmiI	GTMKAC	2 cut(s)	171, 249
XspI	CTAG	4 cut(s)	780, 1008, 1200, 1611
ZraI	GACGTC	2 cut(s)	169, 247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.