Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014885

Physical Location & Seq

Genomic Coordinates Reverse (-)

470182 .. 472907

Gene Structure 2726 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G02290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1170 bp

ATGGGAGGTTGTTTCAGCAATCGGATTAAAACAGATATTGCTTCCAGTACATGGCTAAGTTCGAAATTCTTGAGTAGAGATGGGAGCAAGGGCTCGTCGACCGCTTCCTTCTCTTATATGCCTCGAACAGAAGGCGAGATCTTGCAAAATGCTAATCTCAAGAACTTTAGTCTCAGTGAACTGAAATCTGCAACTAGGAATTTCCGGCCTGATAGTGTGGTTGGTGAAGGTGGATTTGGTTGCGTTTTCAAAGGCTGGATCGATGAGTCCTCTCTCGCTCCTTCTAAACCGGGGACCGGGATTGTCATTGCTGTGAAAAGACTTAACCAAGAAGGGTTTCAAGGTCATCGAGAGTGGCTGGCTGAGATCAATTATTTAGGCCAGCTGGATCATCCTAACCTTGTGAAACTGATTGGATACTGCTTGGAAGAGGAGCACAGGCTTCTTGTTTACGAGTTTATGACTCGTGGTAGTCTTGAGAATCACTTATTCAGAAGAGGAACATTCTATCAGCCACTTTCATGGAACACGCGGGTTCGTATGGCTCTTGGTGCAGCTAGAGGACTTGCTTTTCTTCACAATGCTCAACCGCAAGTTATATACCGAGACTTCAAAGCATCTAACATCTTGCTAGATTCGAACTACAACGCAAAGCTTTCGGATTTCGGTTTGGCTAGAGATGGTCCAATGGGTGACAACAGCCATGTTTCTACCAGAGTCATGGGAACTCAGGGATACGCTGCTCCAGAATATCTAGCTACAGGTCATTTATCGGTGAAGAGCGATGTATACAGTTTTGGGGTTGTGTTACTGGAGTTGTTATCAGGAAGACGAGCAATTGACAAGAATCAACCAGTAGGAGAACACAATCTCGTGGATTGGGCAAGACCCTACTTAACAAACAAGAGAAGACTTCTGCGAGTGATGGATCCTCGTCTCCAAGGTCAATACTCACTAACCCGAGCTTTGAAAATTGCAGTTCTTGCACTCGATTGCATATCTATAGATGCCAAGAGTAGACCGACCATGAACGAAATCGTCAAGACAATGGAAGAACTTCATATCCAGAAGGAAGCATCAAAAGAGCAGCAGAATCCTCAAATCAGCATTGACAACATCATCAACAAATCTCCACAAGCTGTGAATTATCCTAGGCCTTCAATTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

389

Amino Acids

43.53

Weight (kDa)

9.28

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	71 - 348	2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	72 - 349	9.2e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014885)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02290 AT5G02290
fragaria_vesca	FvH4_6g13630 FvH4_6g13630
malus_domestica	MD04G1129600.v1.1 MD12G1142600.v1.1
prunus_persica	Prupe.6G255900_v2.0.a1
pyrus_communis	pycom04g11800 pycom12g13750
rosa_chinensis	RchiOBHm_Chr3g0466481
rosa_laevigata	RLG00000024570
rosa_multiflora	Rmu_sc0003332.1_g000021
rosa_roxburghii	Rroxscaffold_6G00414430
rosa_rugosa	Rorug03G0082300
rosa_samantha	Rh3DG150900
rosa_wichuraiana	Rw3G012190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	51
AccI	GTMKAC	3 cut(s)	98, 789, 1018
AccII	CGCG	1 cut(s)	532
AciI	CCGC	3 cut(s)	102, 532, 590
AclWI	GGATC	4 cut(s)	266, 396, 923, 936
AcsI	RAATTY	2 cut(s)	65, 199
AfaI	GTAC	1 cut(s)	49
AfiI	CCNNNNNNNGG	2 cut(s)	51, 296
AgsI	TTSAA	5 cut(s)	250, 341, 613, 970, 1161
AjuI	GAANNNNNNNTTGG	4 cut(s)	219, 251, 321, 353
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
AluBI	AGCT	6 cut(s)	385, 557, 655, 758, 965, 1139
AluI	AGCT	6 cut(s)	385, 557, 655, 758, 965, 1139
Alw21I	GWGCWC	1 cut(s)	438
Alw26I	GTCTC	3 cut(s)	176, 600, 941
AlwI	GGATC	4 cut(s)	266, 396, 923, 936
Ama87I	CYCGRG	1 cut(s)	960
AoxI	GGCC	3 cut(s)	206, 379, 1154
ApeKI	GCWGC	3 cut(s)	554, 740, 1087
ApoI	RAATTY	2 cut(s)	65, 199
Asp700I	GAANNNNTTC	2 cut(s)	336, 1056
AspA2I	CCTAGG	1 cut(s)	1151
AspS9I	GGNCC	2 cut(s)	294, 683
AsuC2I	CCSGG	2 cut(s)	291, 298
AsuHPI	GGTGA	3 cut(s)	236, 704, 787
AsuII	TTCGAA	2 cut(s)	62, 638
AvaI	CYCGRG	1 cut(s)	960
AvaII	GGWCC	2 cut(s)	294, 683
AvrII	CCTAGG	1 cut(s)	1151
BamHI	GGATCC	1 cut(s)	928
BanII	GRGCYC	1 cut(s)	95
BauI	CACGAG	2 cut(s)	465, 872
BbsI	GAAGAC	2 cut(s)	835, 916
Bbv12I	GWGCWC	1 cut(s)	438
BbvI	GCAGC	3 cut(s)	566, 727, 1099
BccI	CCATC	3 cut(s)	74, 674, 919
BcgI	CGANNNNNNTGC	2 cut(s)	639, 673
BciVI	GTATCC	2 cut(s)	410, 728
BcnI	CCSGG	2 cut(s)	291, 298
BcoDI	GTCTC	3 cut(s)	176, 600, 941
BfaI	CTAG	6 cut(s)	195, 558, 632, 675, 755, 1152
BfmI	CTRYAG	2 cut(s)	759, 1002
BfuI	GTATCC	2 cut(s)	410, 728
BglII	AGATCT	1 cut(s)	138
BisI	GCNGC	3 cut(s)	555, 741, 1088
BlnI	CCTAGG	1 cut(s)	1151
BlsI	GCNGC	3 cut(s)	556, 742, 1089
Bme1390I	CCNGG	2 cut(s)	291, 298
Bme18I	GGWCC	2 cut(s)	294, 683
BmeT110I	CYCGRG	1 cut(s)	960
BmgT120I	GGNCC	2 cut(s)	294, 683
BmiI	GGNNCC	2 cut(s)	295, 930
BmrFI	CCNGG	2 cut(s)	291, 298
BmsI	GCATC	3 cut(s)	626, 997, 1085
BpiI	GAAGAC	2 cut(s)	835, 916
BpmI	CTGGAG	2 cut(s)	729, 833
Bpu14I	TTCGAA	2 cut(s)	62, 638
BpuEI	CTTGAG	3 cut(s)	91, 143, 497
BpuMI	CCSGG	2 cut(s)	291, 298
Bsa29I	ATCGAT	1 cut(s)	261
BsaJI	CCNNGG	3 cut(s)	290, 940, 1151
Bsc4I	CCNNNNNNNGG	2 cut(s)	51, 296
Bse1I	ACTGG	3 cut(s)	45, 816, 854
Bse3DI	GCAATG	1 cut(s)	306
BseCI	ATCGAT	1 cut(s)	261
BseDI	CCNNGG	3 cut(s)	290, 940, 1151
BseGI	GGATG	1 cut(s)	391
BseLI	CCNNNNNNNGG	2 cut(s)	51, 296
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	3 cut(s)	187, 354, 743
BseNI	ACTGG	3 cut(s)	45, 816, 854
BseRI	GAGGAG	1 cut(s)	446
BseXI	GCAGC	3 cut(s)	566, 727, 1099
BsgI	GTGCAG	1 cut(s)	573
Bsh1236I	CGCG	1 cut(s)	532
Bsh1285I	CGRYCG	1 cut(s)	102
BshFI	GGCC	3 cut(s)	208, 381, 1156
BshVI	ATCGAT	1 cut(s)	261
BsiEI	CGRYCG	1 cut(s)	102
BsiHKAI	GWGCWC	1 cut(s)	438
BsiHKCI	CYCGRG	1 cut(s)	960
BsiSI	CCGG	3 cut(s)	205, 290, 297
BslFI	GGGAC	1 cut(s)	307
BslI	CCNNNNNNNGG	2 cut(s)	51, 296
BsmAI	GTCTC	3 cut(s)	176, 600, 941
BsmBI	CGTCTC	1 cut(s)	941
BsmFI	GGGAC	1 cut(s)	307
BsnI	GGCC	3 cut(s)	208, 381, 1156
BsoBI	CYCGRG	1 cut(s)	960
Bsp119I	TTCGAA	2 cut(s)	62, 638
Bsp1286I	GDGCHC	2 cut(s)	95, 438
Bsp143I	GATC	5 cut(s)	138, 258, 366, 388, 928
BspACI	CCGC	3 cut(s)	102, 532, 590
BspANI	GGCC	3 cut(s)	208, 381, 1156
BspCNI	CTCAG	3 cut(s)	186, 355, 742
BspDI	ATCGAT	1 cut(s)	261
BspFNI	CGCG	1 cut(s)	532
BspLI	GGNNCC	2 cut(s)	295, 930
BspPI	GGATC	4 cut(s)	266, 396, 923, 936
BspQI	GCTCTTC	1 cut(s)	773
BspT104I	TTCGAA	2 cut(s)	62, 638
BsrDI	GCAATG	1 cut(s)	306
BsrI	ACTGG	3 cut(s)	45, 816, 854
BssECI	CCNNGG	3 cut(s)	290, 940, 1151
BssMI	GATC	5 cut(s)	138, 258, 366, 388, 928
BssNAI	GTATAC	1 cut(s)	790
BssSI	CACGAG	2 cut(s)	465, 872
BssT1I	CCWWGG	2 cut(s)	940, 1151
Bst1107I	GTATAC	1 cut(s)	790
Bst2BI	CACGAG	2 cut(s)	465, 872
Bst4CI	ACNGT	1 cut(s)	794
Bst6I	CTCTTC	3 cut(s)	423, 490, 773
BstAPI	GCANNNNNTGC	1 cut(s)	983
BstBI	TTCGAA	2 cut(s)	62, 638
BstC8I	GCNNGC	2 cut(s)	360, 383
BstDEI	CTNAG	4 cut(s)	56, 173, 363, 729
BstF5I	GGATG	1 cut(s)	391
BstFNI	CGCG	1 cut(s)	532
BstKTI	GATC	5 cut(s)	141, 261, 369, 391, 931
BstMAI	GTCTC	3 cut(s)	176, 600, 941
BstMBI	GATC	5 cut(s)	138, 258, 366, 388, 928
BstMCI	CGRYCG	1 cut(s)	102
BstMWI	GCNNNNNNNGC	2 cut(s)	551, 983
BstSCI	CCNGG	2 cut(s)	289, 296
BstSFI	CTRYAG	2 cut(s)	759, 1002
BstUI	CGCG	1 cut(s)	532
BstV1I	GCAGC	3 cut(s)	566, 727, 1099
BstV2I	GAAGAC	2 cut(s)	835, 916
BstX2I	RGATCY	2 cut(s)	138, 928
BstXI	CCANNNNNNTGG	2 cut(s)	522, 721
BstYI	RGATCY	2 cut(s)	138, 928
BstZ17I	GTATAC	1 cut(s)	790
Bsu15I	ATCGAT	1 cut(s)	261
BsuI	GTATCC	2 cut(s)	410, 728
BsuRI	GGCC	3 cut(s)	208, 381, 1156
BsuTUI	ATCGAT	1 cut(s)	261
BtgZI	GCGATG	1 cut(s)	798
BtsCI	GGATG	1 cut(s)	391
BtsIMutI	CAGTG	1 cut(s)	181
Cac8I	GCNNGC	2 cut(s)	360, 383
Cfr13I	GGNCC	2 cut(s)	294, 683
ClaI	ATCGAT	1 cut(s)	261
Csp6I	GTAC	1 cut(s)	48
CviAII	CATG	5 cut(s)	51, 522, 704, 721, 1027
CviQI	GTAC	1 cut(s)	48
DdeI	CTNAG	4 cut(s)	56, 173, 363, 729
DpnI	GATC	5 cut(s)	140, 260, 368, 390, 930
DpnII	GATC	5 cut(s)	138, 258, 366, 388, 928
Eam1104I	CTCTTC	3 cut(s)	423, 490, 773
EarI	CTCTTC	3 cut(s)	423, 490, 773
Eco130I	CCWWGG	2 cut(s)	940, 1151
Eco147I	AGGCCT	1 cut(s)	1156
Eco24I	GRGCYC	1 cut(s)	95
Eco47I	GGWCC	2 cut(s)	294, 683
Eco88I	CYCGRG	1 cut(s)	960
EcoT14I	CCWWGG	2 cut(s)	940, 1151
EcoT38I	GRGCYC	1 cut(s)	95
ErhI	CCWWGG	2 cut(s)	940, 1151
Esp3I	CGTCTC	1 cut(s)	941
FaeI	CATG	5 cut(s)	54, 525, 707, 724, 1030
FaqI	GGGAC	1 cut(s)	307
FatI	CATG	5 cut(s)	50, 521, 703, 720, 1026
FauI	CCCGC	1 cut(s)	525
FblI	GTMKAC	3 cut(s)	98, 789, 1018
Fnu4HI	GCNGC	3 cut(s)	555, 741, 1088
FokI	GGATG	1 cut(s)	378
FriOI	GRGCYC	1 cut(s)	95
Fsp4HI	GCNGC	3 cut(s)	555, 741, 1088
FspBI	CTAG	6 cut(s)	195, 558, 632, 675, 755, 1152
GluI	GCNGC	3 cut(s)	555, 741, 1088
GsuI	CTGGAG	2 cut(s)	729, 833
HaeIII	GGCC	3 cut(s)	208, 381, 1156
HapII	CCGG	3 cut(s)	205, 290, 297
Hin1II	CATG	5 cut(s)	54, 525, 707, 724, 1030
HincII	GTYRAC	1 cut(s)	99
HindII	GTYRAC	1 cut(s)	99
HindIII	AAGCTT	1 cut(s)	653
HinfI	GANTC	7 cut(s)	266, 463, 481, 635, 717, 847, 1093
HpaII	CCGG	3 cut(s)	205, 290, 297
HphI	GGTGA	3 cut(s)	236, 704, 787
Hpy166II	GTNNAC	5 cut(s)	99, 179, 451, 790, 1019
Hpy188I	TCNGA	3 cut(s)	24, 494, 661
Hpy188III	TCNNGA	8 cut(s)	70, 160, 350, 476, 746, 825, 1042, 1066
Hpy8I	GTNNAC	5 cut(s)	99, 179, 451, 790, 1019
Hpy99I	CGWCG	1 cut(s)	100
HpyAV	CCTTC	7 cut(s)	118, 125, 221, 291, 326, 1063, 1167
HpyCH4III	ACNGT	1 cut(s)	794
HpyCH4V	TGCA	6 cut(s)	145, 191, 554, 977, 986, 996
HpyF10VI	GCNNNNNNNGC	2 cut(s)	551, 983
HpyF3I	CTNAG	4 cut(s)	56, 173, 363, 729
Hsp92II	CATG	5 cut(s)	54, 525, 707, 724, 1030
Kzo9I	GATC	5 cut(s)	138, 258, 366, 388, 928
LguI	GCTCTTC	1 cut(s)	773
LmnI	GCTCC	4 cut(s)	84, 283, 433, 748
Lsp1109I	GCAGC	3 cut(s)	566, 727, 1099
LweI	GCATC	3 cut(s)	626, 997, 1085
MaeI	CTAG	6 cut(s)	195, 558, 632, 675, 755, 1152
MaeIII	GTNAC	2 cut(s)	692, 807
MalI	GATC	5 cut(s)	140, 260, 368, 390, 930
MboI	GATC	5 cut(s)	138, 258, 366, 388, 928
MboII	GAAGA	7 cut(s)	440, 507, 566, 790, 840, 921, 1064
MfeI	CAATTG	1 cut(s)	837
MflI	RGATCY	2 cut(s)	138, 928
MhlI	GDGCHC	2 cut(s)	95, 438
MluCI	AATT	7 cut(s)	65, 199, 370, 837, 972, 1144, 1161
MlyI	GAGTC	3 cut(s)	275, 457, 726
MnlI	CCTC	7 cut(s)	132, 280, 424, 491, 554, 942, 1107
MroXI	GAANNNNTTC	2 cut(s)	336, 1056
MseI	TTAA	3 cut(s)	27, 324, 896
MslI	CAYNNNNRTG	2 cut(s)	311, 520
MspA1I	CMGCKG	1 cut(s)	385
MspI	CCGG	3 cut(s)	205, 290, 297
MspR9I	CCNGG	2 cut(s)	291, 298
MunI	CAATTG	1 cut(s)	837
MvnI	CGCG	1 cut(s)	532
MwoI	GCNNNNNNNGC	2 cut(s)	551, 983
NciI	CCSGG	2 cut(s)	291, 298
NdeII	GATC	5 cut(s)	138, 258, 366, 388, 928
NlaIII	CATG	5 cut(s)	54, 525, 707, 724, 1030
NlaIV	GGNNCC	2 cut(s)	295, 930
NmuCI	GTSAC	1 cut(s)	692
NspV	TTCGAA	2 cut(s)	62, 638
PceI	AGGCCT	1 cut(s)	1156
PciSI	GCTCTTC	1 cut(s)	773
PdmI	GAANNNNTTC	2 cut(s)	336, 1056
PfeI	GAWTC	4 cut(s)	481, 635, 847, 1093
PflMI	CCANNNNNTGG	1 cut(s)	51
PkrI	GCNGC	3 cut(s)	556, 742, 1089
PleI	GAGTC	3 cut(s)	274, 457, 725
PpsI	GAGTC	3 cut(s)	274, 457, 725
PspN4I	GGNNCC	2 cut(s)	295, 930
PspPI	GGNCC	2 cut(s)	294, 683
PsuI	RGATCY	2 cut(s)	138, 928
PvuII	CAGCTG	1 cut(s)	385
RsaI	GTAC	1 cut(s)	49
RsaNI	GTAC	1 cut(s)	48
RseI	CAYNNNNRTG	2 cut(s)	311, 520
SalI	GTCGAC	1 cut(s)	97
SapI	GCTCTTC	1 cut(s)	773
SaqAI	TTAA	3 cut(s)	27, 324, 896
SatI	GCNGC	3 cut(s)	555, 741, 1088
Sau3AI	GATC	5 cut(s)	138, 258, 366, 388, 928
Sau96I	GGNCC	2 cut(s)	294, 683
SchI	GAGTC	3 cut(s)	275, 457, 726
ScrFI	CCNGG	2 cut(s)	291, 298
SduI	GDGCHC	2 cut(s)	95, 438
SfaNI	GCATC	3 cut(s)	626, 997, 1085
SfcI	CTRYAG	2 cut(s)	759, 1002
SfuI	TTCGAA	2 cut(s)	62, 638
SinI	GGWCC	2 cut(s)	294, 683
SmiMI	CAYNNNNRTG	2 cut(s)	311, 520
SmlI	CTYRAG	3 cut(s)	70, 158, 476
SmoI	CTYRAG	3 cut(s)	70, 158, 476
Sse9I	AATT	7 cut(s)	65, 199, 370, 837, 972, 1144, 1161
SseBI	AGGCCT	1 cut(s)	1156
SsiI	CCGC	3 cut(s)	102, 532, 590
SspMI	CTAG	6 cut(s)	195, 558, 632, 675, 755, 1152
StuI	AGGCCT	1 cut(s)	1156
StyD4I	CCNGG	2 cut(s)	289, 296
StyI	CCWWGG	2 cut(s)	940, 1151
TaaI	ACNGT	1 cut(s)	794
TaqI	TCGA	7 cut(s)	62, 98, 124, 261, 349, 638, 990
TaqII	GACCGA	1 cut(s)	1036
TasI	AATT	7 cut(s)	65, 199, 370, 837, 972, 1144, 1161
TatI	WGTACW	1 cut(s)	47
TfiI	GAWTC	4 cut(s)	481, 635, 847, 1093
Tru1I	TTAA	3 cut(s)	27, 324, 896
Tru9I	TTAA	3 cut(s)	27, 324, 896
TscAI	CASTG	1 cut(s)	181
TseFI	GTSAC	1 cut(s)	692
TseI	GCWGC	3 cut(s)	554, 740, 1087
Tsp45I	GTSAC	1 cut(s)	692
TspDTI	ATGAA	3 cut(s)	510, 1043, 1049
TspRI	CASTG	1 cut(s)	181
Van91I	CCANNNNNTGG	1 cut(s)	51
VpaK11BI	GGWCC	2 cut(s)	294, 683
XapI	RAATTY	2 cut(s)	65, 199
XmaJI	CCTAGG	1 cut(s)	1151
XmiI	GTMKAC	3 cut(s)	98, 789, 1018
XmnI	GAANNNNTTC	2 cut(s)	336, 1056
XspI	CTAG	6 cut(s)	195, 558, 632, 675, 755, 1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.