Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006575

Physical Location & Seq

Genomic Coordinates Forward (+)

6417985 .. 6425836

Gene Structure 7852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0082300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3156 bp

ATGGGGACTGAAAATCCTGGTCGACCAAATTTTACTCCAAGACCTACCACTACACCTTTTGCTGCTCCTCCTCGGACCATGACGCCTTTTACATCTTCAGGTCCTGTGGTTGGACAAGAGGCATCTGGTTTTAGACCACCTCCACAGACACCTTTCTCTTCGTCTGGGCCTGTGGTTGGATCAGATGTTTCTACCTTCAGACCTACTCCACCAGCTCCTCCACAGGCTACCATGCCTTTCTCATCTTTTGGGCCTGCAGGTGGACCACAGACCTCTCCCTTTAGGCCTAGCACACCAGCTAGGTTTAATGATCCATCCGTGCCTCCTCCACCAACAGCAAATGCTCCACCGACTGCTGGACCTTTCTCCCGTTTCCCGACTCCACCATTTTCTTCAACACCTCAGTTTCCTTCGACAGCGCCACCACCCCCTTCCCGTCCTCCACCTATGGGCCAACTACCTTTTCAACCTCCAGGAGGTCAAGCTCCATTTCAACGACCACAGCAGCAGATGCCTTCTGTACAAATGGGATCTCCACCTCAAACTATAAATTCTGCTCCACCAGGTATGAGTCTTCATCAGTCTCCATCAGATTCGTCCTTCCCAGCTCCCCAGCCAAGGGCTCAGACATCTTTCCCTGGATATGCACGGGGAAATCCACAAGCCCCACCAGCTCAGTCTCCATTTCTTACTCATCAAGGAGGCTTTCCCGCTCCACCTGCAGCATCTTCCCCTTTCGCTGCTCAGCAAGTGGGTTATGGAGTACCTCCACCAGTGGCAGCTCCACTGGGTCTGCAGTCGCAACATCCTGGCTCCGGACCCCCACTTGGTGGTGTCCAAGCCTTGACAGAGGACTTCAGCTCATTATCTGTTGGATCTGTTCCCGGATCAATTGAACCTGGAATTGACCCTAAAGCTCTGCCGAGGCCTTTGTGTGGTGATGTGGAGCCAAAACCACTTGCTGAGATGTTCCCCTTGAACTGCAATCCTAGATTTTTAAGGCTTACAACGGGTGCAATACCAAGTTCCCAGTCTTTGTCGTCAAGGTGGCATCTACCTCTGGGTGCTGTTGTTTGTCCACTTGCCGAATCACCTGATGGGGAGGAAGTGCCAGTGGTTAATTTTGGTGCTGCTGGGATTATTCGCTGTAGAAGATGTCGGACATATGTAAACCCATATGTGACATTTACAGATGCTGGAAGAAAGTGGCGTTGCAATATCTGTGCTCTACTTAATGATGTTCCAGGCGATTACTTTGCCAATTTGGATGCCACTGGCAGAAGAATTGATATGGACCAGCGACCTGAGCTTACACATGGTAGTGTGGAATTTGTTGCTCCAACTGAATATATGGTGCGGGCTCCTATGCCGCCACTGTATTTTTTCCTCATCGACGTTTCTTCATCTGCAGTGAGAAGTGGTATGATTGAGGTTGTGGCCCAAACTATTCGGTCATGCTTGGATGACCTGCCTGGCCACCCCAGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAATATGAAGTCTTCTTTAACTCAGCCTCAAATGATGGTGGTCTCAGATTTGGATGACGTATTTGTCCCATTGCCAGATGATCTTCTGGTCAACTTATCTGAATCAAGAAGTGTTGTGGAGACCTTCCTAGATAGCTTGCCGTCTATGTTCCAGGACAACTCAAATGTGGAGTCTGCTTTTGGTCCAGCTCTTAAAGCCTCACTTATGCTTATGAGTCAACTTGGTGGAAAATTGTTGATTTTTCAAAATACACTTCCATCTCTTGGTGTTGGCCGCTTGAAATTGCGTGGAGATGATCTTCGTGTCTATGGAACAGATAAAGAACATCCTCTAAGACTACCAGAAGATCCTTTCTACAAGCAGATGGCTGCAGAATTTACCAAGTTCCAGATAGGAGTAAACGTATATGCCTTCAGTGACAAGTACACTGATATAGCCTCATTAGGTACTCTGGCAAAATATACCGGGGGTCAGGTGTACTATTACCCAAATTTCCAATCTACCATTCATGGAGAGAAGTTGAGACATGAGTTAGCCAGAGATCTTACTAGGGAAACTGCCTGGGAGGCAGTCATGCGCATAAGATGTGGAAAAGGAGTCCGCTTTACATCTTATCACGGGAATTTTATGCTGAGGTCCACCGATTTATTAGCACTTCCAGCTGTAGATTGTGATAAAGCATTTGCGATGCAGCTCTCACTTGAAGAGACATTACTAACTATTCAGACAGTATACTTCCAAGTAGCTTTACTATACACTGCATCCTGCGGAGAAAGGCGTATTAGAGTACATACAGCAGCAGTACCTGTTGTTACAGATCTGGGAGAGATGTATCGCCAGGCTGACACTGGTGCTATTGTCACCTTGCTTTCCAGGCTAGCAATAGAAAAGACTTTGTCGAGTAAGTTGGAAGATGCTCGGAACTCTTTGCAGCTTAGAATTGTCAAAGCCCTTAAAGAATTTAGAAATCTTTATGCTGTACAACACCGTTTGGGAGGGAAGATGATATATCCAGAGTCTCTGAAGTTCTTACCCATGTATGGATTAGCACTTTGTAAGTCAGCACCTCTCCGTGGGGGGTATGCAGATGTATCACTTGATGAACGGTGTGCAGCAGGCCACACAATGATGACTCTACCAGTTAAAAAATTGTTGAAGCTTCTATACCCTAGTTTAATACGGCTCGATGAGTATCTTTTGAAGCCTTCTGCTGATGCTGATGACTTCAACAGCATAGAGAATAGATTACCACTAGTAGCTGAGAACTTAGATTCCAGAGGCCTTTACATATATGATGATGGGTTTCGCTTTGTTCTATGGTTTGGTAGAGTTCTTCCACCTGATATAGCGAAGAATCTTCTTGGGGCTGACTTTGCAGCCGAGTTATCAAAGGTCACCCTTTGTGAGCGTGATAATGAAATGTCAAAGAAGCTAATGAGGATACTTAAGAAATTTAGAGAAAGTGATCCTTCATATCATCAGTTGTGTTATCTTGTAAGACAAGGAGAGCAGCCACGAGAAGGTCATCTTCTCCTTGCCAATCTTGTTGAGGAACAGATGGGGGGGACCAACAGTTATGTTGATTGGATACTTCAGGTACACCGGCAAGTCCAGCAAAATCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

1051

Amino Acids

114.89

Weight (kDa)

7.54

Isoelectric Point (pI)

57.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Sec23_Sec24	PF04810	380 - 418	1.2e-17	Sec23/Sec24 zinc finger
Sec23_trunk	PF04811	455 - 691	3.2e-83	Sec23/Sec24 trunk domain
Sec23_BS	PF08033	697 - 781	8.1e-25	Sec23/Sec24 beta-sandwich domain
Sec23_helical	PF04815	792 - 895	1.4e-24	Sec23/Sec24 helical domain
Gelsolin	PF00626	927 - 992	7.6e-06	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006575)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37630
fragaria_vesca	FvH4_2g38350 FvH4_2g38350 FvH4_6g13640 FvH4_6g13640 FvH4_6g13640
malus_domestica	MD04G1129500.v1.1 MD12G1142500.v1.1
prunus_persica	Prupe.6G255800_v2.0.a1 Prupe.6G255800_v2.0.a1 Prupe.6G255800_v2.0.a1 Prupe.6G255800_v2.0.a1
pyrus_communis	pycom04g11760 pycom12g13740
rosa_chinensis	RchiOBHm_Chr3g0466491
rosa_laevigata	RLG00000024567
rosa_multiflora	Rmu_co8432707.1_g000001 Rmu_sc0003332.1_g000018 Rmu_sc0022726.1_g000008
rosa_roxburghii	Rroxscaffold_6G00414420
rosa_rugosa	Rorug03G0082300 Rorug03G0082300
rosa_samantha	Rh3AG129000 Rh3BG150400 Rh3DG151000
rosa_wichuraiana	Rw3G012200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1530
AarI	CACCTGC	2 cut(s)	248, 727
AasI	GACNNNNNNGTC	1 cut(s)	1592
Acc16I	TGCGCA	1 cut(s)	2108
Acc36I	ACCTGC	3 cut(s)	248, 727, 1476
AccB7I	CCANNNNNTGG	2 cut(s)	830, 1793
AccBSI	CCGCTC	1 cut(s)	713
AccI	GTMKAC	2 cut(s)	22, 2262
AccIII	TCCGGA	1 cut(s)	815
AciI	CCGC	6 cut(s)	711, 1357, 1370, 1804, 2131, 2298
AclWI	GGATC	7 cut(s)	187, 305, 538, 883, 895, 1871, 2990
AcoI	YGGCCR	2 cut(s)	1474, 1801
AcsI	RAATTY	8 cut(s)	28, 550, 1328, 1904, 2020, 2152, 2489, 2981
AcuI	CTGAAG	6 cut(s)	81, 181, 841, 1927, 2573, 3107
AcyI	GRCGYC	1 cut(s)	83
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	9 cut(s)	522, 765, 1955, 1978, 2009, 2319, 2334, 2511, 3129
AflII	CTTAAG	1 cut(s)	2975
AhlI	ACTAGT	1 cut(s)	2782
AjuI	GAANNNNNNNTTGG	4 cut(s)	447, 479, 2019, 2051
AloI	GAACNNNNNNTCC	2 cut(s)	2786, 2818
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
AlwI	GGATC	7 cut(s)	187, 305, 538, 883, 895, 1871, 2990
AlwNI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
Aor13HI	TCCGGA	1 cut(s)	815
ApoI	RAATTY	8 cut(s)	28, 550, 1328, 1904, 2020, 2152, 2489, 2981
ArsI	GACNNNNNNTTYG	2 cut(s)	1685, 1717
AspLEI	GCGC	2 cut(s)	421, 2109
AsuC2I	CCSGG	2 cut(s)	885, 1996
AsuHPI	GGTGA	4 cut(s)	950, 1083, 2383, 2917
AsuNHI	GCTAGC	1 cut(s)	2407
AvaII	GGWCC	9 cut(s)	75, 101, 263, 359, 818, 1294, 1712, 2166, 3096
BalI	TGGCCA	1 cut(s)	1476
BanII	GRGCYC	2 cut(s)	625, 1363
BarI	GAAGNNNNNNTAC	4 cut(s)	2226, 2258, 2678, 2710
BauI	CACGAG	1 cut(s)	3045
BbsI	GAAGAC	2 cut(s)	566, 1533
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	2162
BccI	CCATC	8 cut(s)	322, 595, 1091, 1558, 1795, 1888, 2822, 3082
BceAI	ACGGC	2 cut(s)	1654, 2726
BcgI	CGANNNNNNTGC	2 cut(s)	1238, 1272
BciVI	GTATCC	2 cut(s)	2964, 3111
BcnI	CCSGG	2 cut(s)	885, 1996
BcoDI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BcuI	ACTAGT	1 cut(s)	2782
BfaI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
BfmI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
BfoI	RGCGCY	1 cut(s)	422
BfrI	CTTAAG	1 cut(s)	2975
BfuAI	ACCTGC	3 cut(s)	248, 727, 1476
BfuI	GTATCC	2 cut(s)	2964, 3111
BglI	GCCNNNNNGGC	1 cut(s)	2096
BglII	AGATCT	2 cut(s)	2071, 2347
BlpI	GCTNAGC	1 cut(s)	744
Bme18I	GGWCC	9 cut(s)	75, 101, 263, 359, 818, 1294, 1712, 2166, 3096
BmiI	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
BmrI	ACTGGG	2 cut(s)	797, 1024
BmtI	GCTAGC	1 cut(s)	2411
BmuI	ACTGGG	2 cut(s)	797, 1024
BpiI	GAAGAC	2 cut(s)	566, 1533
BpmI	CTGGAG	1 cut(s)	456
Bpu10I	CCTNAGC	2 cut(s)	1305, 2162
Bpu1102I	GCTNAGC	1 cut(s)	744
BpuMI	CCSGG	2 cut(s)	885, 1996
BsaBI	GATNNNNATC	1 cut(s)	2721
BsaHI	GRCGYC	1 cut(s)	83
BsaI	GGTCTC	2 cut(s)	1576, 1643
BsaJI	CCNNGG	7 cut(s)	71, 617, 637, 923, 1995, 2091, 2602
BsaWI	WCCGGW	1 cut(s)	815
BsaXI	ACNNNNNCTCC	2 cut(s)	1917, 1947
Bse118I	RCCGGY	1 cut(s)	3132
Bse1I	ACTGG	7 cut(s)	773, 792, 1030, 1112, 1279, 2383, 2669
Bse3DI	GCAATG	1 cut(s)	1598
Bse8I	GATNNNNATC	1 cut(s)	2721
BseAI	TCCGGA	1 cut(s)	815
BseDI	CCNNGG	7 cut(s)	71, 617, 637, 923, 1995, 2091, 2602
BseGI	GGATG	7 cut(s)	314, 805, 1273, 1468, 1588, 1855, 2291
BseJI	GATNNNNATC	1 cut(s)	2721
BseMI	GCAATG	1 cut(s)	1598
BseNI	ACTGG	7 cut(s)	773, 792, 1030, 1112, 1279, 2383, 2669
BseRI	GAGGAG	4 cut(s)	57, 60, 207, 315
BseYI	CCCAGC	3 cut(s)	604, 612, 1133
BsgI	GTGCAG	1 cut(s)	2661
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiSI	CCGG	4 cut(s)	816, 885, 1995, 3133
BslFI	GGGAC	3 cut(s)	19, 1580, 3109
BsmAI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BsmFI	GGGAC	3 cut(s)	19, 1580, 3109
Bso31I	GGTCTC	2 cut(s)	1576, 1643
Bsp1286I	GDGCHC	3 cut(s)	625, 1228, 1363
Bsp13I	TCCGGA	1 cut(s)	815
Bsp1407I	TGTACA	2 cut(s)	520, 2509
Bsp1720I	GCTNAGC	1 cut(s)	744
BspACI	CCGC	6 cut(s)	711, 1357, 1370, 1804, 2131, 2298
BspEI	TCCGGA	1 cut(s)	815
BspLI	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
BspMAI	CTGCAG	5 cut(s)	259, 724, 798, 1411, 1903
BspMI	ACCTGC	3 cut(s)	248, 727, 1476
BspOI	GCTAGC	1 cut(s)	2411
BspPI	GGATC	7 cut(s)	187, 305, 538, 883, 895, 1871, 2990
BspTI	CTTAAG	1 cut(s)	2975
BspTNI	GGTCTC	2 cut(s)	1576, 1643
BsrBI	CCGCTC	1 cut(s)	713
BsrDI	GCAATG	1 cut(s)	1598
BsrFI	RCCGGY	1 cut(s)	3132
BsrGI	TGTACA	2 cut(s)	520, 2509
BsrI	ACTGG	7 cut(s)	773, 792, 1030, 1112, 1279, 2383, 2669
BssAI	RCCGGY	1 cut(s)	3132
BssECI	CCNNGG	7 cut(s)	71, 617, 637, 923, 1995, 2091, 2602
BssNAI	GTATAC	1 cut(s)	2263
BssNI	GRCGYC	1 cut(s)	83
BssSI	CACGAG	1 cut(s)	3045
BssT1I	CCWWGG	1 cut(s)	617
Bst1107I	GTATAC	1 cut(s)	2263
Bst2BI	CACGAG	1 cut(s)	3045
Bst4CI	ACNGT	5 cut(s)	1377, 2260, 2519, 2637, 3104
Bst6I	CTCTTC	2 cut(s)	163, 2229
BstACI	GRCGYC	1 cut(s)	83
BstAFI	CTTAAG	1 cut(s)	2975
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstAUI	TGTACA	2 cut(s)	520, 2509
BstC8I	GCNNGC	5 cut(s)	255, 1359, 1667, 2409, 2647
BstDSI	CCRYGG	1 cut(s)	2602
BstEII	GGTNACC	1 cut(s)	2923
BstENI	CCTNNNNNAGG	1 cut(s)	474
BstF5I	GGATG	7 cut(s)	314, 805, 1273, 1468, 1588, 1855, 2291
BstH2I	RGCGCY	1 cut(s)	422
BstHHI	GCGC	2 cut(s)	421, 2109
BstMAI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BstPI	GGTNACC	1 cut(s)	2923
BstSFI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
BstV2I	GAAGAC	2 cut(s)	566, 1533
BstX2I	RGATCY	5 cut(s)	530, 875, 1876, 2071, 2347
BstYI	RGATCY	5 cut(s)	530, 875, 1876, 2071, 2347
BstZ17I	GTATAC	1 cut(s)	2263
BsuI	GTATCC	2 cut(s)	2964, 3111
BtgI	CCRYGG	1 cut(s)	2602
BtgZI	GCGATG	1 cut(s)	2231
BtsCI	GGATG	7 cut(s)	314, 805, 1273, 1468, 1588, 1855, 2291
BtsI	GCAGTG	2 cut(s)	1416, 2286
BveI	ACCTGC	3 cut(s)	248, 727, 1476
Cac8I	GCNNGC	5 cut(s)	255, 1359, 1667, 2409, 2647
CaiI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
CfoI	GCGC	2 cut(s)	421, 2109
Cfr10I	RCCGGY	1 cut(s)	3132
CseI	GACGC	1 cut(s)	91
CsiI	ACCWGGT	1 cut(s)	562
Csp6I	GTAC	9 cut(s)	521, 764, 1954, 1977, 2008, 2318, 2333, 2510, 3128
CviAII	CATG	8 cut(s)	79, 232, 1316, 1455, 2039, 2057, 2104, 2566
CviQI	GTAC	9 cut(s)	521, 764, 1954, 1977, 2008, 2318, 2333, 2510, 3128
DraIII	CACNNNGTG	1 cut(s)	830
DrdI	GACNNNNNNGTC	1 cut(s)	1592
DseDI	GACNNNNNNGTC	1 cut(s)	1592
EaeI	YGGCCR	2 cut(s)	1474, 1801
Eam1104I	CTCTTC	2 cut(s)	163, 2229
EarI	CTCTTC	2 cut(s)	163, 2229
Eco130I	CCWWGG	1 cut(s)	617
Eco147I	AGGCCT	3 cut(s)	286, 928, 2811
Eco24I	GRGCYC	2 cut(s)	625, 1363
Eco31I	GGTCTC	2 cut(s)	1576, 1643
Eco47I	GGWCC	9 cut(s)	75, 101, 263, 359, 818, 1294, 1712, 2166, 3096
Eco57I	CTGAAG	6 cut(s)	81, 181, 841, 1927, 2573, 3107
Eco91I	GGTNACC	1 cut(s)	2923
EcoNI	CCTNNNNNAGG	1 cut(s)	474
EcoO109I	RGGNCCY	1 cut(s)	101
EcoO65I	GGTNACC	1 cut(s)	2923
EcoT14I	CCWWGG	1 cut(s)	617
EcoT38I	GRGCYC	2 cut(s)	625, 1363
ErhI	CCWWGG	1 cut(s)	617
FaeI	CATG	8 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107, 2569
FalI	AAGNNNNNCTT	6 cut(s)	1716, 1748, 2983, 3015, 3042, 3074
FaqI	GGGAC	3 cut(s)	19, 1580, 3109
FatI	CATG	8 cut(s)	78, 231, 1315, 1454, 2038, 2056, 2103, 2565
FauI	CCCGC	2 cut(s)	718, 1350
FauNDI	CATATG	2 cut(s)	1165, 1177
FblI	GTMKAC	2 cut(s)	22, 2262
FokI	GGATG	7 cut(s)	301, 792, 1280, 1475, 1595, 1842, 2278
FriOI	GRGCYC	2 cut(s)	625, 1363
FspAI	RTGCGCAY	1 cut(s)	2108
FspBI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
FspI	TGCGCA	1 cut(s)	2108
GlaI	GCGC	2 cut(s)	420, 2108
GsaI	CCCAGC	3 cut(s)	608, 616, 1137
GsuI	CTGGAG	1 cut(s)	456
HaeII	RGCGCY	1 cut(s)	422
HapII	CCGG	4 cut(s)	816, 885, 1995, 3133
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	2 cut(s)	421, 2109
Hin1I	GRCGYC	1 cut(s)	83
Hin1II	CATG	8 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107, 2569
Hin6I	GCGC	2 cut(s)	419, 2107
HinP1I	GCGC	2 cut(s)	419, 2107
HincII	GTYRAC	3 cut(s)	23, 1621, 1748
HindII	GTYRAC	3 cut(s)	23, 1621, 1748
HindIII	AAGCTT	1 cut(s)	2687
HpaII	CCGG	4 cut(s)	816, 885, 1995, 3133
HphI	GGTGA	4 cut(s)	950, 1083, 2383, 2917
Hpy188III	TCNNGA	6 cut(s)	376, 816, 1635, 1918, 2543, 2805
Hpy99I	CGWCG	1 cut(s)	1397
HpyCH4III	ACNGT	5 cut(s)	1377, 2260, 2519, 2637, 3104
HpyCH4IV	ACGT	3 cut(s)	1395, 1587, 1932
HpySE526I	ACGT	3 cut(s)	1395, 1587, 1932
Hsp92I	GRCGYC	1 cut(s)	83
Hsp92II	CATG	8 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107, 2569
HspAI	GCGC	2 cut(s)	419, 2107
Kpn2I	TCCGGA	1 cut(s)	815
MabI	ACCWGGT	1 cut(s)	562
MaeI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
MaeII	ACGT	3 cut(s)	1395, 1587, 1932
MaeIII	GTNAC	5 cut(s)	1180, 1946, 2341, 2389, 2923
MbiI	CCGCTC	1 cut(s)	713
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	5 cut(s)	530, 875, 1876, 2071, 2347
MhlI	GDGCHC	3 cut(s)	625, 1228, 1363
MlsI	TGGCCA	1 cut(s)	1476
MluNI	TGGCCA	1 cut(s)	1476
MlyI	GAGTC	7 cut(s)	373, 580, 1709, 1753, 2136, 2555, 2656
MmeI	TCCRAC	6 cut(s)	91, 157, 853, 1139, 1364, 2418
Mox20I	TGGCCA	1 cut(s)	1476
MroI	TCCGGA	1 cut(s)	815
MscI	TGGCCA	1 cut(s)	1476
MslI	CAYNNNNRTG	2 cut(s)	1320, 2657
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	1 cut(s)	2192
MspCI	CTTAAG	1 cut(s)	2975
MspI	CCGG	4 cut(s)	816, 885, 1995, 3133
MunI	CAATTG	1 cut(s)	891
NciI	CCSGG	2 cut(s)	885, 1996
NdeI	CATATG	2 cut(s)	1165, 1177
NheI	GCTAGC	1 cut(s)	2407
NlaIII	CATG	8 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107, 2569
NlaIV	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
NmeAIII	GCCGAG	2 cut(s)	948, 2935
NmuCI	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
NsbI	TGCGCA	1 cut(s)	2108
PaqCI	CACCTGC	2 cut(s)	248, 727
PceI	AGGCCT	3 cut(s)	286, 928, 2811
PfeI	GAWTC	5 cut(s)	593, 1088, 1631, 2801, 2884
PflFI	GACNNNGTC	1 cut(s)	2425
PflMI	CCANNNNNTGG	2 cut(s)	830, 1793
PfoI	TCCNGGA	3 cut(s)	472, 883, 1680
PleI	GAGTC	7 cut(s)	373, 579, 1708, 1752, 2135, 2554, 2656
PpsI	GAGTC	7 cut(s)	373, 579, 1708, 1752, 2135, 2554, 2656
PpuMI	RGGWCCY	1 cut(s)	101
PsiI	TTATAA	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	101
PspEI	GGTNACC	1 cut(s)	2923
PspFI	CCCAGC	3 cut(s)	604, 612, 1133
PspN4I	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
PspPPI	RGGWCCY	1 cut(s)	101
PstI	CTGCAG	5 cut(s)	259, 724, 798, 1411, 1903
PstNI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
PsuI	RGATCY	5 cut(s)	530, 875, 1876, 2071, 2347
PsyI	GACNNNGTC	1 cut(s)	2425
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	9 cut(s)	522, 765, 1955, 1978, 2009, 2319, 2334, 2511, 3129
RsaNI	GTAC	9 cut(s)	521, 764, 1954, 1977, 2008, 2318, 2333, 2510, 3128
RseI	CAYNNNNRTG	2 cut(s)	1320, 2657
SalI	GTCGAC	1 cut(s)	21
SbfI	CCTGCAGG	1 cut(s)	259
SchI	GAGTC	7 cut(s)	373, 580, 1709, 1753, 2136, 2555, 2656
SdaI	CCTGCAGG	1 cut(s)	259
SduI	GDGCHC	3 cut(s)	625, 1228, 1363
SexAI	ACCWGGT	1 cut(s)	562
SfcI	CTRYAG	7 cut(s)	255, 720, 794, 1147, 1407, 1899, 2193
SinI	GGWCC	9 cut(s)	75, 101, 263, 359, 818, 1294, 1712, 2166, 3096
SmiMI	CAYNNNNRTG	2 cut(s)	1320, 2657
SmlI	CTYRAG	1 cut(s)	2975
SmoI	CTYRAG	1 cut(s)	2975
SpeI	ACTAGT	1 cut(s)	2782
Sse8387I	CCTGCAGG	1 cut(s)	259
SseBI	AGGCCT	3 cut(s)	286, 928, 2811
SsiI	CCGC	6 cut(s)	711, 1357, 1370, 1804, 2131, 2298
SspMI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
StuI	AGGCCT	3 cut(s)	286, 928, 2811
StyI	CCWWGG	1 cut(s)	617
TaaI	ACNGT	5 cut(s)	1377, 2260, 2519, 2637, 3104
TaiI	ACGT	3 cut(s)	1398, 1590, 1935
TaqI	TCGA	5 cut(s)	22, 413, 1392, 2429, 2715
TaqII	GACCGA	1 cut(s)	1440
TatI	WGTACW	5 cut(s)	520, 1953, 2007, 2317, 2509
TauI	GCSGC	2 cut(s)	1372, 1806
TfiI	GAWTC	5 cut(s)	593, 1088, 1631, 2801, 2884
TseFI	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
Tsp45I	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
TspDTI	ATGAA	7 cut(s)	566, 1392, 1550, 2027, 2646, 2961, 2991
TspGWI	ACGGA	3 cut(s)	307, 2591, 3141
Tth111I	GACNNNGTC	1 cut(s)	2425
Van91I	CCANNNNNTGG	2 cut(s)	830, 1793
Vha464I	CTTAAG	1 cut(s)	2975
VpaK11BI	GGWCC	9 cut(s)	75, 101, 263, 359, 818, 1294, 1712, 2166, 3096
XagI	CCTNNNNNAGG	1 cut(s)	474
XapI	RAATTY	8 cut(s)	28, 550, 1328, 1904, 2020, 2152, 2489, 2981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2375
XmiI	GTMKAC	2 cut(s)	22, 2262
XspI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.