Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014885

Physical Location & Seq

Genomic Coordinates Forward (+)

24874564 .. 24878175

Gene Structure 3612 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G255900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGGGGGTTTGCTGGAGCAACAAAATCAAGGCTGAAACTCCTTCTCATACAGGATTCAATTCTAAAAATGGGAGTGCTTCAAATAGCAAGGCGTCATCAGGTTCCATGCCTGTCACTCCTCGGAGTGAGGGTGAGATCTTACAATCTACTAAATTGAAGAGTATCGGCTTCAGTGAGCTCAAAAATGCCACAAGAAACTTCCGTCCTGACAGTGTACTAGGAGATGGCGGTTTTGGTTCTGTTTTCAAAGGTTGGATTGATGAAAGTTCTTTCATAGCTACCAAGGCCGGTACTGGCATGGTGATTGCCGTGAAGAGGCTCAACCAAGATGGAATCCAGGGTCACAAGGAATGGTTGACAGAAATCAACTATCTTGGGGAGCTGCATCACCCTAATCTTGTGAAATTAATTGGTTATTGCTTAGAGGATGATCATCGGCTCTTAGTTTACGAGTTCATGCCTAAGGGTAGCATGGAAAATCATCTATTCAGGAGAAGTTCTCACTTTCAGCCACTATCTTGGAGCCTTAGAATGAAAATCGCCCTTGGTGCTGCAAGGGGACTTGCTTTTCTCCACAATGCTGAAACACAAGTCATACATCGTGACTTCAAGTCGGCTAACATTTTGCTCGACTCGAACTACAATGCAAAGCTGTCTGATTTTGGATTAGCCAGGGATGGCCCAACTGGTGACAAGAGCCATGTCTCTACTAGGGTCATTGGAACTCAAGGATATGCTGCTCCTGAGTATTTAGCCACAGGTCATCTTACTGCCAAGAGTGACATATACAGTTTTGGAGTTGTTCTACTAGAAATGTTATCCGGACGACGAGCTATAGATAAGAACAGACCAACTGGAGAACACAACCTGGTGGAGTGGGCAAAACCATACCTGAGAAACAAACGCCGGGTTTTTCGTGTTATTGATTCTCGACTTGAAGGCCAGTACTCACTCAATCGGGCCCAAAAGGCTGCCAACCTTGCACTTCAATGTCTTTCTATAGATCCTAAGTACAGACCCGACGTGAACGAAGTGGTAACAACACTGGAGGAGCTTCAGGAGACAAAGGACATGCAGAAAAGTACTCAGAAAGAGAACCATGTAACTAGTCATGGCCATTCTAACGGTGCTCCTAATGCTTCCAGAGTGACTGCTTATCCCAGGCCTTCTGCATCCCCACTTTTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

397

Amino Acids

43.84

Weight (kDa)

9.42

Isoelectric Point (pI)

35.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014885)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02290 AT5G02290
fragaria_vesca	FvH4_6g13630 FvH4_6g13630
malus_domestica	MD04G1129600.v1.1 MD12G1142600.v1.1
prunus_persica	Prupe.6G255900_v2.0.a1
pyrus_communis	pycom04g11800 pycom12g13750
rosa_chinensis	RchiOBHm_Chr3g0466481
rosa_laevigata	RLG00000024570
rosa_multiflora	Rmu_sc0003332.1_g000021
rosa_roxburghii	Rroxscaffold_6G00414430
rosa_rugosa	Rorug03G0082300
rosa_samantha	Rh3DG150900
rosa_wichuraiana	Rw3G012190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	821
AciI	CCGC	1 cut(s)	228
AclWI	GGATC	1 cut(s)	998
AcoI	YGGCCR	1 cut(s)	1114
AcuI	CTGAAG	2 cut(s)	154, 1040
AcyI	GRCGYC	1 cut(s)	92
AfaI	GTAC	5 cut(s)	216, 292, 947, 1013, 1084
AfiI	CCNNNNNNNGG	1 cut(s)	315
AgsI	TTSAA	7 cut(s)	58, 81, 157, 247, 610, 938, 989
AhdI	GACNNNNNGTC	1 cut(s)	610
AhlI	ACTAGT	1 cut(s)	1106
AjiI	CACGTC	1 cut(s)	1024
AjnI	CCWGG	4 cut(s)	336, 671, 867, 1160
AluBI	AGCT	6 cut(s)	178, 278, 382, 652, 833, 1054
AluI	AGCT	6 cut(s)	178, 278, 382, 652, 833, 1054
Alw21I	GWGCWC	2 cut(s)	180, 1132
Alw26I	GTCTC	2 cut(s)	709, 1055
AlwI	GGATC	1 cut(s)	998
Aor13HI	TCCGGA	1 cut(s)	821
AoxI	GGCC	6 cut(s)	285, 679, 940, 960, 1114, 1163
ApaI	GGGCCC	1 cut(s)	964
ApeKI	GCWGC	4 cut(s)	382, 551, 737, 971
AseI	ATTAAT	1 cut(s)	407
AspS9I	GGNCC	3 cut(s)	680, 960, 961
AsuC2I	CCSGG	1 cut(s)	908
AsuHPI	GGTGA	4 cut(s)	143, 313, 380, 701
AxyI	CCTNAGG	1 cut(s)	462
BaeGI	GKGCMC	1 cut(s)	964
BalI	TGGCCA	1 cut(s)	1116
BanII	GRGCYC	2 cut(s)	180, 964
Bbv12I	GWGCWC	2 cut(s)	180, 1132
BbvI	GCAGC	4 cut(s)	369, 538, 724, 958
BccI	CCATC	3 cut(s)	218, 323, 671
BceAI	ACGGC	1 cut(s)	293
BciT130I	CCWGG	4 cut(s)	338, 673, 869, 1162
BclI	TGATCA	1 cut(s)	430
BcnI	CCSGG	1 cut(s)	908
BcoDI	GTCTC	2 cut(s)	709, 1055
BcuI	ACTAGT	1 cut(s)	1106
BfaI	CTAG	4 cut(s)	218, 711, 809, 1107
BfmI	CTRYAG	2 cut(s)	834, 999
BglI	GCCNNNNNGGC	1 cut(s)	968
BglII	AGATCT	1 cut(s)	135
BisI	GCNGC	4 cut(s)	383, 552, 738, 972
BlsI	GCNGC	4 cut(s)	384, 553, 739, 973
BmcAI	AGTACT	2 cut(s)	947, 1084
Bme1390I	CCNGG	5 cut(s)	338, 673, 869, 908, 1162
BmeRI	GACNNNNNGTC	1 cut(s)	610
BmgBI	CACGTC	1 cut(s)	1024
BmgT120I	GGNCC	3 cut(s)	680, 960, 961
BmiI	GGNNCC	3 cut(s)	103, 524, 962
BmrFI	CCNGG	5 cut(s)	338, 673, 869, 908, 1162
BmsI	GCATC	2 cut(s)	394, 1181
BplI	GAGNNNNNCTC	2 cut(s)	484, 516
BpmI	CTGGAG	3 cut(s)	34, 876, 1067
BpuEI	CTTGAG	1 cut(s)	711
BpuMI	CCSGG	1 cut(s)	908
BsaBI	GATNNNNATC	1 cut(s)	432
BsaHI	GRCGYC	1 cut(s)	92
BsaJI	CCNNGG	6 cut(s)	119, 282, 337, 544, 672, 1160
BsaWI	WCCGGW	1 cut(s)	821
BsaXI	ACNNNNNCTCC	2 cut(s)	115, 145
Bsc4I	CCNNNNNNNGG	1 cut(s)	315
Bse118I	RCCGGY	1 cut(s)	287
Bse1I	ACTGG	5 cut(s)	298, 691, 859, 943, 1050
Bse21I	CCTNAGG	1 cut(s)	462
Bse8I	GATNNNNATC	1 cut(s)	432
BseAI	TCCGGA	1 cut(s)	821
BseBI	CCWGG	4 cut(s)	338, 673, 869, 1162
BseDI	CCNNGG	6 cut(s)	119, 282, 337, 544, 672, 1160
BseGI	GGATG	3 cut(s)	433, 682, 1172
BseJI	GATNNNNATC	1 cut(s)	432
BseLI	CCNNNNNNNGG	1 cut(s)	315
BseMII	CTCAG	3 cut(s)	735, 884, 1100
BseNI	ACTGG	5 cut(s)	298, 691, 859, 943, 1050
BseRI	GAGGAG	2 cut(s)	108, 1064
BseSI	GKGCMC	1 cut(s)	964
BseXI	GCAGC	4 cut(s)	369, 538, 724, 958
BshFI	GGCC	6 cut(s)	287, 681, 942, 962, 1116, 1165
BsiHKAI	GWGCWC	2 cut(s)	180, 1132
BsiSI	CCGG	3 cut(s)	288, 822, 907
BslFI	GGGAC	1 cut(s)	573
BslI	CCNNNNNNNGG	1 cut(s)	315
BsmAI	GTCTC	2 cut(s)	709, 1055
BsmFI	GGGAC	1 cut(s)	573
BsnI	GGCC	6 cut(s)	287, 681, 942, 962, 1116, 1165
Bsp120I	GGGCCC	1 cut(s)	960
Bsp1286I	GDGCHC	3 cut(s)	180, 964, 1132
Bsp13I	TCCGGA	1 cut(s)	821
Bsp143I	GATC	3 cut(s)	135, 430, 1003
BspACI	CCGC	1 cut(s)	228
BspANI	GGCC	6 cut(s)	287, 681, 942, 962, 1116, 1165
BspCNI	CTCAG	3 cut(s)	736, 885, 1099
BspEI	TCCGGA	1 cut(s)	821
BspLI	GGNNCC	3 cut(s)	103, 524, 962
BspPI	GGATC	1 cut(s)	998
BsrFI	RCCGGY	1 cut(s)	287
BsrI	ACTGG	5 cut(s)	298, 691, 859, 943, 1050
BssAI	RCCGGY	1 cut(s)	287
BssECI	CCNNGG	6 cut(s)	119, 282, 337, 544, 672, 1160
BssMI	GATC	3 cut(s)	135, 430, 1003
BssNI	GRCGYC	1 cut(s)	92
BssT1I	CCWWGG	2 cut(s)	282, 544
Bst2UI	CCWGG	4 cut(s)	338, 673, 869, 1162
Bst4CI	ACNGT	3 cut(s)	212, 791, 1127
Bst6I	CTCTTC	2 cut(s)	152, 308
BstACI	GRCGYC	1 cut(s)	92
BstDEI	CTNAG	8 cut(s)	421, 442, 462, 527, 744, 893, 1008, 1086
BstF5I	GGATG	3 cut(s)	433, 682, 1172
BstKTI	GATC	3 cut(s)	138, 433, 1006
BstMAI	GTCTC	2 cut(s)	709, 1055
BstMBI	GATC	3 cut(s)	135, 430, 1003
BstMWI	GCNNNNNNNGC	5 cut(s)	284, 548, 968, 980, 1136
BstNI	CCWGG	4 cut(s)	338, 673, 869, 1162
BstNSI	RCATGY	1 cut(s)	1075
BstSCI	CCNGG	5 cut(s)	336, 671, 867, 906, 1160
BstSFI	CTRYAG	2 cut(s)	834, 999
BstSLI	GKGCMC	1 cut(s)	964
BstV1I	GCAGC	4 cut(s)	369, 538, 724, 958
BstX2I	RGATCY	2 cut(s)	135, 1003
BstXI	CCANNNNNNTGG	1 cut(s)	519
BstYI	RGATCY	2 cut(s)	135, 1003
Bsu36I	CCTNAGG	1 cut(s)	462
BsuRI	GGCC	6 cut(s)	287, 681, 942, 962, 1116, 1165
BtrI	CACGTC	1 cut(s)	1024
BtsCI	GGATG	3 cut(s)	433, 682, 1172
BtsIMutI	CAGTG	3 cut(s)	178, 217, 1043
Cfr10I	RCCGGY	1 cut(s)	287
Cfr13I	GGNCC	3 cut(s)	680, 960, 961
CseI	GACGC	1 cut(s)	81
CsiI	ACCWGGT	1 cut(s)	867
Csp6I	GTAC	5 cut(s)	215, 291, 946, 1012, 1083
CviAII	CATG	8 cut(s)	106, 298, 457, 472, 701, 1072, 1100, 1112
CviQI	GTAC	5 cut(s)	215, 291, 946, 1012, 1083
DdeI	CTNAG	8 cut(s)	421, 442, 462, 527, 744, 893, 1008, 1086
DpnI	GATC	3 cut(s)	137, 432, 1005
DpnII	GATC	3 cut(s)	135, 430, 1003
DriI	GACNNNNNGTC	1 cut(s)	610
EaeI	YGGCCR	1 cut(s)	1114
Eam1104I	CTCTTC	2 cut(s)	152, 308
Eam1105I	GACNNNNNGTC	1 cut(s)	610
EarI	CTCTTC	2 cut(s)	152, 308
Ecl136II	GAGCTC	1 cut(s)	178
Eco130I	CCWWGG	2 cut(s)	282, 544
Eco147I	AGGCCT	1 cut(s)	1165
Eco24I	GRGCYC	2 cut(s)	180, 964
Eco53kI	GAGCTC	1 cut(s)	178
Eco57I	CTGAAG	2 cut(s)	154, 1040
Eco81I	CCTNAGG	1 cut(s)	462
EcoICRI	GAGCTC	1 cut(s)	178
EcoRII	CCWGG	4 cut(s)	336, 671, 867, 1160
EcoT14I	CCWWGG	2 cut(s)	282, 544
EcoT38I	GRGCYC	2 cut(s)	180, 964
ErhI	CCWWGG	2 cut(s)	282, 544
FaeI	CATG	8 cut(s)	109, 301, 460, 475, 704, 1075, 1103, 1115
FaqI	GGGAC	1 cut(s)	573
FatI	CATG	8 cut(s)	105, 297, 456, 471, 700, 1071, 1099, 1111
FbaI	TGATCA	1 cut(s)	430
Fnu4HI	GCNGC	4 cut(s)	383, 552, 738, 972
FokI	GGATG	3 cut(s)	440, 689, 1159
FriOI	GRGCYC	2 cut(s)	180, 964
Fsp4HI	GCNGC	4 cut(s)	383, 552, 738, 972
FspBI	CTAG	4 cut(s)	218, 711, 809, 1107
GluI	GCNGC	4 cut(s)	383, 552, 738, 972
GsuI	CTGGAG	3 cut(s)	34, 876, 1067
HaeIII	GGCC	6 cut(s)	287, 681, 942, 962, 1116, 1165
HapII	CCGG	3 cut(s)	288, 822, 907
HgaI	GACGC	1 cut(s)	81
Hin1I	GRCGYC	1 cut(s)	92
Hin1II	CATG	8 cut(s)	109, 301, 460, 475, 704, 1075, 1103, 1115
HincII	GTYRAC	1 cut(s)	357
HindII	GTYRAC	1 cut(s)	357
HinfI	GANTC	4 cut(s)	54, 333, 632, 926
HpaII	CCGG	3 cut(s)	288, 822, 907
HphI	GGTGA	4 cut(s)	143, 313, 380, 701
Hpy166II	GTNNAC	4 cut(s)	215, 357, 448, 1027
Hpy188I	TCNGA	3 cut(s)	123, 658, 1089
Hpy188III	TCNNGA	8 cut(s)	206, 490, 602, 743, 822, 930, 1058, 1143
Hpy8I	GTNNAC	4 cut(s)	215, 357, 448, 1027
Hpy99I	CGWCG	2 cut(s)	831, 1025
HpyAV	CCTTC	3 cut(s)	51, 932, 1176
HpyCH4III	ACNGT	3 cut(s)	212, 791, 1127
HpyCH4IV	ACGT	1 cut(s)	1023
HpyCH4V	TGCA	6 cut(s)	385, 554, 647, 983, 1075, 1172
HpyF10VI	GCNNNNNNNGC	5 cut(s)	284, 548, 968, 980, 1136
HpyF3I	CTNAG	8 cut(s)	421, 442, 462, 527, 744, 893, 1008, 1086
HpySE526I	ACGT	1 cut(s)	1023
Hsp92I	GRCGYC	1 cut(s)	92
Hsp92II	CATG	8 cut(s)	109, 301, 460, 475, 704, 1075, 1103, 1115
Kpn2I	TCCGGA	1 cut(s)	821
Ksp22I	TGATCA	1 cut(s)	430
Kzo9I	GATC	3 cut(s)	135, 430, 1003
LmnI	GCTCC	6 cut(s)	15, 379, 522, 745, 1051, 1135
Lsp1109I	GCAGC	4 cut(s)	369, 538, 724, 958
LweI	GCATC	2 cut(s)	394, 1181
MabI	ACCWGGT	1 cut(s)	867
MaeI	CTAG	4 cut(s)	218, 711, 809, 1107
MaeII	ACGT	1 cut(s)	1023
MaeIII	GTNAC	8 cut(s)	112, 341, 602, 689, 779, 1036, 1102, 1147
MalI	GATC	3 cut(s)	137, 432, 1005
MboI	GATC	3 cut(s)	135, 430, 1003
MboII	GAAGA	2 cut(s)	169, 325
MflI	RGATCY	2 cut(s)	135, 1003
MhlI	GDGCHC	3 cut(s)	180, 964, 1132
MlsI	TGGCCA	1 cut(s)	1116
MluCI	AATT	4 cut(s)	58, 152, 404, 408
MluNI	TGGCCA	1 cut(s)	1116
MlyI	GAGTC	1 cut(s)	626
MmeI	TCCRAC	1 cut(s)	233
MnlI	CCTC	5 cut(s)	121, 129, 309, 418, 1042
Mox20I	TGGCCA	1 cut(s)	1116
MroI	TCCGGA	1 cut(s)	821
MscI	TGGCCA	1 cut(s)	1116
MseI	TTAA	1 cut(s)	407
MslI	CAYNNNNRTG	1 cut(s)	988
Msp20I	TGGCCA	1 cut(s)	1116
MspI	CCGG	3 cut(s)	288, 822, 907
MspR9I	CCNGG	5 cut(s)	338, 673, 869, 908, 1162
MvaI	CCWGG	4 cut(s)	338, 673, 869, 1162
MwoI	GCNNNNNNNGC	5 cut(s)	284, 548, 968, 980, 1136
NciI	CCSGG	1 cut(s)	908
NdeII	GATC	3 cut(s)	135, 430, 1003
NlaIII	CATG	8 cut(s)	109, 301, 460, 475, 704, 1075, 1103, 1115
NlaIV	GGNNCC	3 cut(s)	103, 524, 962
NmuCI	GTSAC	6 cut(s)	112, 341, 602, 689, 779, 1147
NspI	RCATGY	1 cut(s)	1075
PceI	AGGCCT	1 cut(s)	1165
PfeI	GAWTC	3 cut(s)	54, 333, 926
PkrI	GCNGC	4 cut(s)	384, 553, 739, 973
PleI	GAGTC	1 cut(s)	626
PpsI	GAGTC	1 cut(s)	626
PshBI	ATTAAT	1 cut(s)	407
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	4 cut(s)	336, 671, 867, 1160
PspGI	CCWGG	4 cut(s)	336, 671, 867, 1160
PspN4I	GGNNCC	3 cut(s)	103, 524, 962
PspOMI	GGGCCC	1 cut(s)	960
PspPI	GGNCC	3 cut(s)	680, 960, 961
PsuI	RGATCY	2 cut(s)	135, 1003
RsaI	GTAC	5 cut(s)	216, 292, 947, 1013, 1084
RsaNI	GTAC	5 cut(s)	215, 291, 946, 1012, 1083
RseI	CAYNNNNRTG	1 cut(s)	988
SacI	GAGCTC	1 cut(s)	180
SaqAI	TTAA	1 cut(s)	407
SatI	GCNGC	4 cut(s)	383, 552, 738, 972
Sau3AI	GATC	3 cut(s)	135, 430, 1003
Sau96I	GGNCC	3 cut(s)	680, 960, 961
ScaI	AGTACT	2 cut(s)	947, 1084
SchI	GAGTC	1 cut(s)	626
ScrFI	CCNGG	5 cut(s)	338, 673, 869, 908, 1162
SduI	GDGCHC	3 cut(s)	180, 964, 1132
SexAI	ACCWGGT	1 cut(s)	867
SfaNI	GCATC	2 cut(s)	394, 1181
SfcI	CTRYAG	2 cut(s)	834, 999
SmiMI	CAYNNNNRTG	1 cut(s)	988
SmlI	CTYRAG	1 cut(s)	726
SmoI	CTYRAG	1 cut(s)	726
SpeI	ACTAGT	1 cut(s)	1106
Sse9I	AATT	4 cut(s)	58, 152, 404, 408
SseBI	AGGCCT	1 cut(s)	1165
SsiI	CCGC	1 cut(s)	228
SspMI	CTAG	4 cut(s)	218, 711, 809, 1107
SstI	GAGCTC	1 cut(s)	180
StuI	AGGCCT	1 cut(s)	1165
StyD4I	CCNGG	5 cut(s)	336, 671, 867, 906, 1160
StyI	CCWWGG	2 cut(s)	282, 544
TaaI	ACNGT	3 cut(s)	212, 791, 1127
TaiI	ACGT	1 cut(s)	1026
TaqI	TCGA	3 cut(s)	630, 635, 931
TasI	AATT	4 cut(s)	58, 152, 404, 408
TatI	WGTACW	4 cut(s)	214, 945, 1011, 1082
TfiI	GAWTC	3 cut(s)	54, 333, 926
Tru1I	TTAA	1 cut(s)	407
Tru9I	TTAA	1 cut(s)	407
TscAI	CASTG	3 cut(s)	178, 217, 1050
TseFI	GTSAC	6 cut(s)	112, 341, 602, 689, 779, 1147
TseI	GCWGC	4 cut(s)	382, 551, 737, 971
Tsp45I	GTSAC	6 cut(s)	112, 341, 602, 689, 779, 1147
TspDTI	ATGAA	4 cut(s)	262, 276, 445, 548
TspGWI	ACGGA	1 cut(s)	191
TspRI	CASTG	3 cut(s)	178, 217, 1050
VspI	ATTAAT	1 cut(s)	407
XceI	RCATGY	1 cut(s)	1075
XspI	CTAG	4 cut(s)	218, 711, 809, 1107
ZrmI	AGTACT	2 cut(s)	947, 1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.