MD04G1129600.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
21590162 .. 21593357
3196 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1129600.v1.1.491

Sequence Viewer

Length: 1185 bp
ATGGGGGCTTGCTGGAGCAACAAAATCAAGGCTGAAAGTCCTTTGAATACAGGATTCAATTCGAAACAAGGGAGTGGTTCAAGTGGCAGGAACTCATCGACTTCCATGCCGGTGACTCCTCGGAGCGAGGGCGAGATCTTACAGTCTACTACTCTGAAGAGTATCAGCTTCAGTGAGCTTAAAACCGCCACCAGAAACTTCCGTCCTGACAGTGTGCTGGGAGATGGGGGTTTTGGTTCCGTTTTCAAAGGTTGGATTGACGAAAGTTCGCTTATAGCATCCAAGGCCGGGACTGGCATGGTGATCGCCGTGAAGAAACTCAACCAAGATGGGTTCCAGGGTCACAAGGAATGGCTGGCAGAAATCAACTATCTAGGAGAGCTGCATCATCCTAATCTTGTGAAACTTATTGGATATTGCTTAGAGGATGATCACCGGCTCTTAGTTTATGAGTTCATGCCTAAGGGCAGCATGGAAAACCATCTATTCAGGAGAAGTTCTCACTTTCATCCACTTTCTTGGAGCTTCCGAATGAAAATTGCCCTCGGTGCTGCAAAGGGACTTGCCTTTCTCCACAATGCTGAAACACAAATTATACACCGTGACTTCAAGTCAGCTAATATTTTGCTCGACGCGAACTACAACGCAAAGCTGTCTGATTTTGGGTTAGCCAGGGATGGGCCAACTGGTGACAAGAGCCACGTCTCTACTAGGGTCATTGGAACCCAGGGATATGCTGCTCCGGAGTATTTAGCCACAGGTCATCTTACTACCAAGAGTGACATATACAGTTTCGGAGTTGTTCTTCTAGAAATGTTATCTGGACAACGAGCTATAGATAAGAACAGGCCAACTGGAGAACACAATCTGGTGGAATGGGCAAAACCATACCTGAGAAACCAACGCCGAGTTTTTCGTGTCATTGATTCTCGCCTTGAAGGCCAGTACTCAGTCAGTTGTGCCCAAAAGGCTGCTGCCCTTGCGCTTCAATGTCTTGCTGTAGATCCCAAGGACAGACCTGACATGAATGAAGTAGTAACAGTACTGGATGAGCTTCAGGACGTCCCCAAGGGTACTCAGAAAGAGCATAATGCAACTAGTCCCAAGTCCAGCAAAAGGAGTGTTGACGATGCTGCCAACGTGACTGCTTATCCCCGGCCTTCTAGAGACCCACTTTTTGCTTGA

Protein Analysis

395

Amino Acids

43.4

Weight (kDa)

8.97

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 70 - 346 5.7e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 71 - 348 2.4e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014885)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G02290 AT5G02290
fragaria_vesca FvH4_6g13630 FvH4_6g13630
malus_domestica MD04G1129600.v1.1 MD12G1142600.v1.1
prunus_persica Prupe.6G255900_v2.0.a1
pyrus_communis pycom04g11800 pycom12g13750
rosa_chinensis RchiOBHm_Chr3g0466481
rosa_laevigata RLG00000024570
rosa_multiflora Rmu_sc0003332.1_g000021
rosa_roxburghii Rroxscaffold_6G00414430
rosa_rugosa Rorug03G0082300
rosa_samantha Rh3DG150900
rosa_wichuraiana Rw3G012190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1065
AccI GTMKAC 1 cut(s) 146
AccII CGCG 1 cut(s) 635
AccIII TCCGGA 1 cut(s) 742
AciI CCGC 1 cut(s) 186
AclWI GGATC 1 cut(s) 998
AcuI CTGAAG 3 cut(s) 154, 176, 1040
AcyI GRCGYC 1 cut(s) 1062
AfaI GTAC 3 cut(s) 947, 1044, 1075
AfiI CCNNNNNNNGG 3 cut(s) 288, 678, 1116
AgsI TTSAA 7 cut(s) 46, 58, 81, 247, 610, 938, 989
AhdI GACNNNNNGTC 1 cut(s) 610
AhlI ACTAGT 1 cut(s) 1097
AjiI CACGTC 1 cut(s) 703
AjnI CCWGG 3 cut(s) 336, 671, 726
AluBI AGCT 8 cut(s) 168, 178, 382, 525, 617, 652, 833, 1054
AluI AGCT 8 cut(s) 168, 178, 382, 525, 617, 652, 833, 1054
Alw26I GTCTC 2 cut(s) 709, 1161
AlwI GGATC 1 cut(s) 998
Aor13HI TCCGGA 1 cut(s) 742
AoxI GGCC 5 cut(s) 285, 680, 848, 940, 1157
ApeKI GCWGC 7 cut(s) 382, 468, 551, 737, 971, 974, 1133
ArsI GACNNNNNNTTYG 1 cut(s) 1160
AspLEI GCGC 1 cut(s) 985
AspS9I GGNCC 1 cut(s) 680
AsuC2I CCSGG 2 cut(s) 289, 1156
AsuHPI GGTGA 4 cut(s) 124, 313, 425, 701
AsuII TTCGAA 1 cut(s) 62
AxyI CCTNAGG 1 cut(s) 462
BaeGI GKGCMC 1 cut(s) 964
BbvI GCAGC 7 cut(s) 369, 480, 538, 724, 958, 961, 1120
BccI CCATC 4 cut(s) 218, 323, 489, 671
BceAI ACGGC 1 cut(s) 293
BcgI CGANNNNNNTGC 4 cut(s) 88, 122, 286, 320
BciT130I CCWGG 3 cut(s) 338, 673, 728
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 2 cut(s) 289, 1156
BcoDI GTCTC 2 cut(s) 709, 1161
BcuI ACTAGT 1 cut(s) 1097
BfaI CTAG 5 cut(s) 374, 711, 809, 1098, 1164
BfmI CTRYAG 2 cut(s) 834, 999
BglI GCCNNNNNGGC 2 cut(s) 939, 968
BglII AGATCT 1 cut(s) 135
BisI GCNGC 7 cut(s) 383, 469, 552, 738, 972, 975, 1134
BlsI GCNGC 7 cut(s) 384, 470, 553, 739, 973, 976, 1135
BmcAI AGTACT 2 cut(s) 947, 1044
Bme1390I CCNGG 5 cut(s) 289, 338, 673, 728, 1156
BmeRI GACNNNNNGTC 1 cut(s) 610
BmgBI CACGTC 1 cut(s) 703
BmgT120I GGNCC 1 cut(s) 680
BmiI GGNNCC 3 cut(s) 238, 335, 724
BmrFI CCNGG 5 cut(s) 289, 338, 673, 728, 1156
BmsI GCATC 3 cut(s) 287, 394, 1120
BplI GAGNNNNNCTC 2 cut(s) 484, 516
BpmI CTGGAG 2 cut(s) 34, 876
Bpu14I TTCGAA 1 cut(s) 62
BpuMI CCSGG 2 cut(s) 289, 1156
BsaHI GRCGYC 1 cut(s) 1062
BsaI GGTCTC 1 cut(s) 1161
BsaWI WCCGGW 1 cut(s) 742
Bsc4I CCNNNNNNNGG 3 cut(s) 288, 678, 1116
Bse118I RCCGGY 2 cut(s) 109, 435
Bse1I ACTGG 5 cut(s) 298, 691, 859, 943, 1050
Bse21I CCTNAGG 1 cut(s) 462
BseAI TCCGGA 1 cut(s) 742
BseBI CCWGG 3 cut(s) 338, 673, 728
BseGI GGATG 6 cut(s) 278, 388, 433, 508, 682, 1054
BseLI CCNNNNNNNGG 3 cut(s) 288, 678, 1116
BseMII CTCAG 3 cut(s) 884, 963, 1091
BseNI ACTGG 5 cut(s) 298, 691, 859, 943, 1050
BseRI GAGGAG 1 cut(s) 108
BseSI GKGCMC 1 cut(s) 964
BseXI GCAGC 7 cut(s) 369, 480, 538, 724, 958, 961, 1120
BseYI CCCAGC 1 cut(s) 217
Bsh1236I CGCG 1 cut(s) 635
BshFI GGCC 5 cut(s) 287, 682, 850, 942, 1159
BsiSI CCGG 5 cut(s) 110, 288, 436, 743, 1156
BslFI GGGAC 4 cut(s) 304, 573, 1049, 1086
BslI CCNNNNNNNGG 3 cut(s) 288, 678, 1116
BsmAI GTCTC 2 cut(s) 709, 1161
BsmBI CGTCTC 1 cut(s) 709
BsmFI GGGAC 4 cut(s) 304, 573, 1049, 1086
BsnI GGCC 5 cut(s) 287, 682, 850, 942, 1159
Bso31I GGTCTC 1 cut(s) 1161
Bsp119I TTCGAA 1 cut(s) 62
Bsp1286I GDGCHC 1 cut(s) 964
Bsp13I TCCGGA 1 cut(s) 742
Bsp143I GATC 4 cut(s) 135, 303, 430, 1003
BspACI CCGC 1 cut(s) 186
BspANI GGCC 5 cut(s) 287, 682, 850, 942, 1159
BspCNI CTCAG 3 cut(s) 885, 962, 1090
BspEI TCCGGA 1 cut(s) 742
BspFNI CGCG 1 cut(s) 635
BspLI GGNNCC 3 cut(s) 238, 335, 724
BspPI GGATC 1 cut(s) 998
BspT104I TTCGAA 1 cut(s) 62
BspTNI GGTCTC 1 cut(s) 1161
BsrFI RCCGGY 2 cut(s) 109, 435
BsrI ACTGG 5 cut(s) 298, 691, 859, 943, 1050
BssAI RCCGGY 2 cut(s) 109, 435
BssMI GATC 4 cut(s) 135, 303, 430, 1003
BssNI GRCGYC 1 cut(s) 1062
BssT1I CCWWGG 3 cut(s) 282, 1008, 1068
Bst2UI CCWGG 3 cut(s) 338, 673, 728
Bst4CI ACNGT 5 cut(s) 144, 212, 602, 791, 1042
Bst6I CTCTTC 1 cut(s) 152
BstACI GRCGYC 1 cut(s) 1062
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 2 cut(s) 10, 357
BstDEI CTNAG 6 cut(s) 421, 442, 462, 893, 949, 1077
BstF5I GGATG 6 cut(s) 278, 388, 433, 508, 682, 1054
BstFNI CGCG 1 cut(s) 635
BstHHI GCGC 1 cut(s) 985
BstKTI GATC 4 cut(s) 138, 306, 433, 1006
BstMAI GTCTC 2 cut(s) 709, 1161
BstMBI GATC 4 cut(s) 135, 303, 430, 1003
BstMWI GCNNNNNNNGC 5 cut(s) 284, 548, 939, 968, 980
BstNI CCWGG 3 cut(s) 338, 673, 728
BstSCI CCNGG 5 cut(s) 287, 336, 671, 726, 1154
BstSFI CTRYAG 2 cut(s) 834, 999
BstSLI GKGCMC 1 cut(s) 964
BstUI CGCG 1 cut(s) 635
BstV1I GCAGC 7 cut(s) 369, 480, 538, 724, 958, 961, 1120
BstX2I RGATCY 2 cut(s) 135, 1003
BstXI CCANNNNNNTGG 1 cut(s) 519
BstYI RGATCY 2 cut(s) 135, 1003
Bsu36I CCTNAGG 1 cut(s) 462
BsuRI GGCC 5 cut(s) 287, 682, 850, 942, 1159
BtrI CACGTC 1 cut(s) 703
BtsCI GGATG 6 cut(s) 278, 388, 433, 508, 682, 1054
BtsIMutI CAGTG 2 cut(s) 178, 217
Cac8I GCNNGC 2 cut(s) 10, 357
CfoI GCGC 1 cut(s) 985
Cfr10I RCCGGY 2 cut(s) 109, 435
Cfr13I GGNCC 1 cut(s) 680
CseI GACGC 1 cut(s) 641
Csp6I GTAC 3 cut(s) 946, 1043, 1074
CviAII CATG 5 cut(s) 106, 298, 457, 472, 1024
CviQI GTAC 3 cut(s) 946, 1043, 1074
DdeI CTNAG 6 cut(s) 421, 442, 462, 893, 949, 1077
DpnI GATC 4 cut(s) 137, 305, 432, 1005
DpnII GATC 4 cut(s) 135, 303, 430, 1003
DriI GACNNNNNGTC 1 cut(s) 610
Eam1104I CTCTTC 1 cut(s) 152
Eam1105I GACNNNNNGTC 1 cut(s) 610
EarI CTCTTC 1 cut(s) 152
Eco130I CCWWGG 3 cut(s) 282, 1008, 1068
Eco31I GGTCTC 1 cut(s) 1161
Eco57I CTGAAG 3 cut(s) 154, 176, 1040
Eco81I CCTNAGG 1 cut(s) 462
EcoRII CCWGG 3 cut(s) 336, 671, 726
EcoT14I CCWWGG 3 cut(s) 282, 1008, 1068
ErhI CCWWGG 3 cut(s) 282, 1008, 1068
Esp3I CGTCTC 1 cut(s) 709
FaeI CATG 5 cut(s) 109, 301, 460, 475, 1027
FaqI GGGAC 4 cut(s) 304, 573, 1049, 1086
FatI CATG 5 cut(s) 105, 297, 456, 471, 1023
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 7 cut(s) 383, 469, 552, 738, 972, 975, 1134
FokI GGATG 6 cut(s) 265, 375, 440, 495, 689, 1061
Fsp4HI GCNGC 7 cut(s) 383, 469, 552, 738, 972, 975, 1134
FspBI CTAG 5 cut(s) 374, 711, 809, 1098, 1164
GlaI GCGC 1 cut(s) 984
GluI GCNGC 7 cut(s) 383, 469, 552, 738, 972, 975, 1134
GsaI CCCAGC 1 cut(s) 221
GsuI CTGGAG 2 cut(s) 34, 876
HaeIII GGCC 5 cut(s) 287, 682, 850, 942, 1159
HapII CCGG 5 cut(s) 110, 288, 436, 743, 1156
HgaI GACGC 1 cut(s) 641
HhaI GCGC 1 cut(s) 985
Hin1I GRCGYC 1 cut(s) 1062
Hin1II CATG 5 cut(s) 109, 301, 460, 475, 1027
Hin6I GCGC 1 cut(s) 983
HinP1I GCGC 1 cut(s) 983
HincII GTYRAC 1 cut(s) 1126
HindII GTYRAC 1 cut(s) 1126
HinfI GANTC 3 cut(s) 54, 115, 926
HpaII CCGG 5 cut(s) 110, 288, 436, 743, 1156
HphI GGTGA 4 cut(s) 124, 313, 425, 701
Hpy166II GTNNAC 2 cut(s) 147, 1126
Hpy188I TCNGA 6 cut(s) 123, 156, 530, 658, 797, 1080
Hpy188III TCNNGA 7 cut(s) 206, 490, 743, 809, 822, 1058, 1164
Hpy8I GTNNAC 2 cut(s) 147, 1126
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 2 cut(s) 932, 1170
HpyCH4III ACNGT 5 cut(s) 144, 212, 602, 791, 1042
HpyCH4IV ACGT 3 cut(s) 702, 1062, 1140
HpyCH4V TGCA 3 cut(s) 385, 554, 1094
HpyF10VI GCNNNNNNNGC 5 cut(s) 284, 548, 939, 968, 980
HpyF3I CTNAG 6 cut(s) 421, 442, 462, 893, 949, 1077
HpySE526I ACGT 3 cut(s) 702, 1062, 1140
Hsp92I GRCGYC 1 cut(s) 1062
Hsp92II CATG 5 cut(s) 109, 301, 460, 475, 1027
HspAI GCGC 1 cut(s) 983
Kpn2I TCCGGA 1 cut(s) 742
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 4 cut(s) 135, 303, 430, 1003
LmnI GCTCC 4 cut(s) 15, 123, 522, 745
Lsp1109I GCAGC 7 cut(s) 369, 480, 538, 724, 958, 961, 1120
LweI GCATC 3 cut(s) 287, 394, 1120
MaeI CTAG 5 cut(s) 374, 711, 809, 1098, 1164
MaeII ACGT 3 cut(s) 702, 1062, 1140
MaeIII GTNAC 7 cut(s) 112, 341, 602, 689, 779, 1036, 1141
MalI GATC 4 cut(s) 137, 305, 432, 1005
MboI GATC 4 cut(s) 135, 303, 430, 1003
MboII GAAGA 3 cut(s) 169, 325, 797
MflI RGATCY 2 cut(s) 135, 1003
MhlI GDGCHC 1 cut(s) 964
MluCI AATT 3 cut(s) 58, 537, 591
MlyI GAGTC 1 cut(s) 109
MmeI TCCRAC 1 cut(s) 233
MnlI CCTC 4 cut(s) 121, 129, 418, 554
MroI TCCGGA 1 cut(s) 742
MseI TTAA 1 cut(s) 180
MslI CAYNNNNRTG 1 cut(s) 110
MspI CCGG 5 cut(s) 110, 288, 436, 743, 1156
MspR9I CCNGG 5 cut(s) 289, 338, 673, 728, 1156
MvaI CCWGG 3 cut(s) 338, 673, 728
MvnI CGCG 1 cut(s) 635
MwoI GCNNNNNNNGC 5 cut(s) 284, 548, 939, 968, 980
NciI CCSGG 2 cut(s) 289, 1156
NdeII GATC 4 cut(s) 135, 303, 430, 1003
NlaIII CATG 5 cut(s) 109, 301, 460, 475, 1027
NlaIV GGNNCC 3 cut(s) 238, 335, 724
NmeAIII GCCGAG 1 cut(s) 932
NmuCI GTSAC 6 cut(s) 112, 341, 602, 689, 779, 1141
NspV TTCGAA 1 cut(s) 62
PasI CCCWGGG 1 cut(s) 727
PfeI GAWTC 2 cut(s) 54, 926
PkrI GCNGC 7 cut(s) 384, 470, 553, 739, 973, 976, 1135
PleI GAGTC 1 cut(s) 109
PpsI GAGTC 1 cut(s) 109
Psp6I CCWGG 3 cut(s) 336, 671, 726
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 3 cut(s) 336, 671, 726
PspN4I GGNNCC 3 cut(s) 238, 335, 724
PspPI GGNCC 1 cut(s) 680
PsuI RGATCY 2 cut(s) 135, 1003
RsaI GTAC 3 cut(s) 947, 1044, 1075
RsaNI GTAC 3 cut(s) 946, 1043, 1074
RseI CAYNNNNRTG 1 cut(s) 110
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 7 cut(s) 383, 469, 552, 738, 972, 975, 1134
Sau3AI GATC 4 cut(s) 135, 303, 430, 1003
Sau96I GGNCC 1 cut(s) 680
ScaI AGTACT 2 cut(s) 947, 1044
SchI GAGTC 1 cut(s) 109
ScrFI CCNGG 5 cut(s) 289, 338, 673, 728, 1156
SduI GDGCHC 1 cut(s) 964
SfaNI GCATC 3 cut(s) 287, 394, 1120
SfcI CTRYAG 2 cut(s) 834, 999
SfuI TTCGAA 1 cut(s) 62
SmiMI CAYNNNNRTG 1 cut(s) 110
SpeI ACTAGT 1 cut(s) 1097
Sse9I AATT 3 cut(s) 58, 537, 591
SsiI CCGC 1 cut(s) 186
SspI AATATT 1 cut(s) 622
SspMI CTAG 5 cut(s) 374, 711, 809, 1098, 1164
StyD4I CCNGG 5 cut(s) 287, 336, 671, 726, 1154
StyI CCWWGG 3 cut(s) 282, 1008, 1068
TaaI ACNGT 5 cut(s) 144, 212, 602, 791, 1042
TaiI ACGT 3 cut(s) 705, 1065, 1143
TaqI TCGA 3 cut(s) 62, 98, 630
TasI AATT 3 cut(s) 58, 537, 591
TatI WGTACW 2 cut(s) 945, 1042
TfiI GAWTC 2 cut(s) 54, 926
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 2 cut(s) 178, 217
TseFI GTSAC 6 cut(s) 112, 341, 602, 689, 779, 1141
TseI GCWGC 7 cut(s) 382, 468, 551, 737, 971, 974, 1133
Tsp45I GTSAC 6 cut(s) 112, 341, 602, 689, 779, 1141
TspDTI ATGAA 5 cut(s) 445, 497, 548, 1040, 1044
TspGWI ACGGA 2 cut(s) 191, 229
TspRI CASTG 2 cut(s) 178, 217
XbaI TCTAGA 2 cut(s) 808, 1163
XmiI GTMKAC 1 cut(s) 146
XspI CTAG 5 cut(s) 374, 711, 809, 1098, 1164
ZraI GACGTC 1 cut(s) 1063
ZrmI AGTACT 2 cut(s) 947, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.