Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009425

Physical Location & Seq

Genomic Coordinates Reverse (-)

644279 .. 648538

Gene Structure 4260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G02830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGAGAGACTTTGTTATTGTCTTTGGCTCCTCCTCCGCCATAACCAATCCTCACCATCACCACCGTCGCTGTTACGCCACAGCACCAGAGTCCAACCGGAAAACTAAATCCAATTCTTCTTTCACCAAGCTACTTCCGTCACTACCGCAGCAACATTCACCTTCTCCTGCTTCAGTCTCCGCGACTCATTCTCTCTCTAGCCACTTCTCCAATGTCGTAAGATGGATTCCAGATGGCTCGCTTGAGTATTACGCTGATTTTGCCTCGAAGCTAGCTGAGGATGGTCGAATTGAGGACGTCGCTCTCATCGCCGAGACTTTGGCTGCAGAGTCCGGAGCTAATGTGGCTCGTTTCGCTTCCATGGTTGATTATGATCTCTTATCGAAAGGGATTTCGTCGAATCTTCGACAAGGTAAGATTGAGAGCGTCGTTTACACTTTGAAGAGAATTGAGAAGGTAGGAATTGCTCCATTGGACCTTGTCGATGATTCGTCTGTGAAATTAATGAGGAAACAGTTTCGAGCAATGGCTAACTCTGTGCAAGTGGAGAAAGCTATTGATCTAATGGAGATACTTGCCGGTCTCGGATTCAAAATCAAAGAGTTGGTGGATCCTTTTGATGTTGTAAAGAGTTGTGTTGAAATTTCCAATCCTCAATTAGCTATTAGATACGCATGTCTTTTGCCGCATACAGAGTTATTGCTTTGTAGAATTATTCATGGTTTCGGAAAGAAAGGAGATATGGTCTCTGTTATGACAGCATATGAAGCCTGCAAACAGATTTTGGATACTCCTAACATGTATATATGCCGAACGATGATAGATGTTTGTGGCCTGTGTGGTGATTACGTTAAATCGAGGTACATATATGAGGATCTTCTCAAAGAAAACATTAAGCCAAATATTTATGTTATTAACAGTCTAATGAATGTTAATTCCCATGATCTTGGGTACACACTAAAAGTATACAAGAATATGCAGATACTTGATGTTACAGCTGACATGACATCCTACAACATACTACTGAAAACATGTTGCCTGGCTGGACGGGTTGATCTTGCCCAGGATATATACAAAGAAGCAAAACGAATGGAATCTTCCGGATTGTTGAAGTTGGACGCCTTTACATATTGTACTATTATAAAGGTTTTTGCAGATGCAAAGATGTGGAAATGGGCACTCAAAGTCAAAGATGATATGAAATCTGTTGGTGTAACCCCAAATACTCATACATGGTCATCATTAATCAGTGCATGTGCCAATGCAGGTTTAGTAGAGCAGGCAAATCACCTATTTGAAGAAATGCTTGCATCTGGCTGCGAGCCTAATTCTCAATGTTTCAACATCCTACTGCATGCTTGCGTTGAAGCTTGCCAGTATGACAGAGCTTTTCGTCTTTTTCAATCTTGGAAAGGAAGCTCCGTTAATGAATCCTTATATGCAGATGACATAGTTAGTAAAGGTCGCACTTCCAGCCCAAATATATTGAAAAATAATGGTCCTGGGTCTTTGGTGAATCGCAATTCTAATTCACCTTATATCCAAGCTTCAAAGAGATTTTGCTTCAAGCCAACAACTGCTACATATAATATACTCTTGAAAGCCTGTGGTACTGATTACTATCGAGGAAAAGAATTGATGGATGAGATGAAGAGCCTAGGTCTTTCACCTAATCAAATAACATGGTCGACTTTGATTGATATGTGTGGAGGTTCAGGCGATGTAGAAGGTGCTGTACGGATTTTGAGAACTATGCATTCGGCTGGAACCAGACCTGATGTTGTTGCATACACAACAGCAATCAAGATTTGTGCGGAAAATAAATGTTTGAAGTTGGCATTTTCTTTGTTTGAGGAGATGAGGAGATATCAGATTAAGCCAAACTGGGTGACATATAATACACTTCTTAAAGCACGAAGCAAATATGGTTCTTTACTTGAAGTGCGGCAATGCTTGGCTATATATCAGGACATGCGAAATGCAGGGTACAAACCTAACGATCACTTTCTCAAGGAACTTATTGAGGAGTGGTGCGAAGGAGTCATACAGGAAAACGGTCAGAGCCAAGATAAAATAAGCGACCAAGAAGGAGATAACGCAGGGAGACCTGTAAGCCTACTCATTGAAAAAGTAGCTACACACATGCAAGAGAGAACAGCTGGAAACCTTGCAATTGACCTTCAAGGACTTACCAAGATTGAGGCTCGACTTGTTGTTCTAGCAGTTTTGCGAATGATCAAGGAAGACTATATGCGAGGTGACGTTGTAATAGATGATGTGTTGATTATCATAGGAACCGATGAAGCAAATACCGTTTCAGGAAAGCAAGAGATTACTGTGCAAGAAGCGCTAGTGAAGCTTCTACGAGATGAATTGTCTCTTGTGGTTCTTCCTGCTGGACAAAGAAATATCATACAGGATGCACACTGTGTAGATGATGCAGACCAAGAGAACACTAAGTCATTTGTTAGTATATCCTCAACGAGGAGACCTGCGATTCTGGAGAGGTTGATGGTTACAAAGGCGTCTCTGTATCAGTGGTTGCAGCGCAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

852

Amino Acids

95.22

Weight (kDa)

7.69

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	313 - 471	9.9e-13	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	342 - 469	1.9e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	370 - 421	5.5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	373 - 421	6.2e-10	PPR repeat family
PPR_1	PF12854	404 - 435	5.4e-06	PPR repeat
PPR_2	PF13041	411 - 455	1.6e-11	PPR repeat family
PPR_3	PF13812	411 - 456	2.5e-06	Pentatricopeptide repeat domain
PPR	PF01535	411 - 440	8.2e-07	PPR repeat
PPR_long	PF17177	531 - 671	1.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	560 - 605	1.9e-07	PPR repeat family
PPR_3	PF13812	580 - 638	5.4e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	592 - 638	1.6e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02830
fragaria_vesca	FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120
malus_domestica	MD12G1126500.v1.1
prunus_persica	Prupe.6G243100_v2.0.a1
pyrus_communis	pycom12g12460
rosa_chinensis	RchiOBHm_Chr3g0468421
rosa_laevigata	RLG00000024430
rosa_multiflora	Rmu_sc0014003.1_g000015 Rmu_sc0020046.1_g000004
rosa_roxburghii	Rroxscaffold_6G00412780
rosa_rugosa	Rorug03G0095300 Rorug03G0095400
rosa_samantha	Rh3AG143100 Rh3BG165500 Rh3DG165100
rosa_wichuraiana	Rw0G014180 Rw3G013520 Rw3G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1142
AatII	GACGTC	1 cut(s)	300
Acc36I	ACCTGC	2 cut(s)	1256, 2500
AccI	GTMKAC	2 cut(s)	966, 1688
AccII	CGCG	1 cut(s)	182
AccIII	TCCGGA	2 cut(s)	332, 1100
AciI	CCGC	6 cut(s)	36, 146, 180, 686, 1814, 1945
AclWI	GGATC	3 cut(s)	605, 618, 882
AcsI	RAATTY	1 cut(s)	642
AcuI	CTGAAG	1 cut(s)	156
AcyI	GRCGYC	3 cut(s)	297, 1119, 2525
AdeI	CACNNNGTG	1 cut(s)	2429
AfaI	GTAC	6 cut(s)	863, 953, 1135, 1612, 1737, 1988
AfeI	AGCGCT	1 cut(s)	2349
AfiI	CCNNNNNNNGG	1 cut(s)	2484
AflIII	ACRYGT	2 cut(s)	798, 1031
AjnI	CCWGG	3 cut(s)	1038, 1062, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	104, 136
Alw26I	GTCTC	8 cut(s)	181, 308, 587, 751, 2098, 2382, 2482, 2532
AlwI	GGATC	3 cut(s)	605, 618, 882
Aor13HI	TCCGGA	2 cut(s)	332, 1100
Aor51HI	AGCGCT	1 cut(s)	2349
AoxI	GGCC	1 cut(s)	832
ApeKI	GCWGC	4 cut(s)	148, 323, 1317, 2545
ApoI	RAATTY	1 cut(s)	642
AseI	ATTAAT	2 cut(s)	503, 1244
AspA2I	CCTAGG	1 cut(s)	1657
AspLEI	GCGC	2 cut(s)	2350, 2550
AspS9I	GGNCC	2 cut(s)	475, 1499
AsuNHI	GCTAGC	1 cut(s)	271
AvaII	GGWCC	2 cut(s)	475, 1499
AvrII	CCTAGG	1 cut(s)	1657
BaeGI	GKGCMC	1 cut(s)	1180
BaeI	ACNNNNGTAYC	2 cut(s)	661, 694
BamHI	GGATCC	1 cut(s)	610
BarI	GAAGNNNNNNTAC	4 cut(s)	1719, 1751, 2028, 2060
BbsI	GAAGAC	1 cut(s)	2250
BbvCI	CCTCAGC	1 cut(s)	276
BbvI	GCAGC	3 cut(s)	160, 310, 1304
BccI	CCATC	6 cut(s)	63, 216, 227, 275, 1633, 2506
BciT130I	CCWGG	3 cut(s)	1040, 1064, 1503
BciVI	GTATCC	1 cut(s)	781
BclI	TGATCA	1 cut(s)	2235
BcoDI	GTCTC	8 cut(s)	181, 308, 587, 751, 2098, 2382, 2482, 2532
BfaI	CTAG	5 cut(s)	198, 272, 1658, 2219, 2351
BfmI	CTRYAG	1 cut(s)	324
BfoI	RGCGCY	1 cut(s)	2351
BfuAI	ACCTGC	2 cut(s)	1256, 2500
BfuI	GTATCC	1 cut(s)	781
BisI	GCNGC	6 cut(s)	149, 324, 686, 1318, 1946, 2546
BlnI	CCTAGG	1 cut(s)	1657
BlsI	GCNGC	6 cut(s)	150, 325, 687, 1319, 1947, 2547
Bme1390I	CCNGG	3 cut(s)	1040, 1064, 1503
Bme18I	GGWCC	2 cut(s)	475, 1499
BmgT120I	GGNCC	2 cut(s)	475, 1499
BmiI	GGNNCC	4 cut(s)	28, 612, 1768, 2296
BmrFI	CCNGG	3 cut(s)	1040, 1064, 1503
BmrI	ACTGGG	1 cut(s)	1894
BmsI	GCATC	4 cut(s)	1147, 1319, 2410, 2428
BmtI	GCTAGC	1 cut(s)	275
BmuI	ACTGGG	1 cut(s)	1894
BpiI	GAAGAC	1 cut(s)	2250
BpmI	CTGGAG	1 cut(s)	2522
Bpu10I	CCTNAGC	1 cut(s)	276
BpuEI	CTTGAG	2 cut(s)	263, 1994
BsaBI	GATNNNNATC	2 cut(s)	372, 1620
BsaHI	GRCGYC	3 cut(s)	297, 1119, 2525
BsaI	GGTCTC	4 cut(s)	587, 751, 2098, 2482
BsaJI	CCNNGG	4 cut(s)	360, 1062, 1502, 1657
BsaWI	WCCGGW	3 cut(s)	96, 332, 1100
BsaXI	ACNNNNNCTCC	4 cut(s)	327, 357, 729, 759
Bsc4I	CCNNNNNNNGG	1 cut(s)	2484
Bse118I	RCCGGY	1 cut(s)	578
Bse1I	ACTGG	2 cut(s)	1375, 1889
Bse3DI	GCAATG	2 cut(s)	531, 1955
Bse8I	GATNNNNATC	2 cut(s)	372, 1620
BseAI	TCCGGA	2 cut(s)	332, 1100
BseBI	CCWGG	3 cut(s)	1040, 1064, 1503
BseDI	CCNNGG	4 cut(s)	360, 1062, 1502, 1657
BseGI	GGATG	5 cut(s)	286, 1007, 1344, 1648, 2425
BseJI	GATNNNNATC	2 cut(s)	372, 1620
BseLI	CCNNNNNNNGG	1 cut(s)	2484
BseMI	GCAATG	2 cut(s)	531, 1955
BseMII	CTCAG	1 cut(s)	267
BseNI	ACTGG	2 cut(s)	1375, 1889
BseRI	GAGGAG	6 cut(s)	19, 22, 1868, 1876, 2039, 2500
BseSI	GKGCMC	1 cut(s)	1180
BseXI	GCAGC	3 cut(s)	160, 310, 1304
Bsh1236I	CGCG	1 cut(s)	182
BshFI	GGCC	1 cut(s)	834
BsiSI	CCGG	4 cut(s)	97, 333, 579, 1101
BslI	CCNNNNNNNGG	1 cut(s)	2484
BsmAI	GTCTC	8 cut(s)	181, 308, 587, 751, 2098, 2382, 2482, 2532
BsmBI	CGTCTC	1 cut(s)	2532
BsmI	GAATGC	1 cut(s)	1756
BsnI	GGCC	1 cut(s)	834
Bso31I	GGTCTC	4 cut(s)	587, 751, 2098, 2482
Bsp1286I	GDGCHC	1 cut(s)	1180
Bsp13I	TCCGGA	2 cut(s)	332, 1100
Bsp143I	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
Bsp19I	CCATGG	1 cut(s)	360
BspACI	CCGC	6 cut(s)	36, 146, 180, 686, 1814, 1945
BspANI	GGCC	1 cut(s)	834
BspCNI	CTCAG	1 cut(s)	268
BspEI	TCCGGA	2 cut(s)	332, 1100
BspFNI	CGCG	1 cut(s)	182
BspLI	GGNNCC	4 cut(s)	28, 612, 1768, 2296
BspMAI	CTGCAG	1 cut(s)	328
BspMI	ACCTGC	2 cut(s)	1256, 2500
BspOI	GCTAGC	1 cut(s)	275
BspPI	GGATC	3 cut(s)	605, 618, 882
BspQI	GCTCTTC	1 cut(s)	1646
BspTNI	GGTCTC	4 cut(s)	587, 751, 2098, 2482
BsrDI	GCAATG	2 cut(s)	531, 1955
BsrFI	RCCGGY	1 cut(s)	578
BsrI	ACTGG	2 cut(s)	1375, 1889
BssAI	RCCGGY	1 cut(s)	578
BssECI	CCNNGG	4 cut(s)	360, 1062, 1502, 1657
BssMI	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
BssNAI	GTATAC	1 cut(s)	967
BssNI	GRCGYC	3 cut(s)	297, 1119, 2525
BssT1I	CCWWGG	2 cut(s)	360, 1657
Bst1107I	GTATAC	1 cut(s)	967
Bst2UI	CCWGG	3 cut(s)	1040, 1064, 1503
Bst4CI	ACNGT	7 cut(s)	65, 516, 920, 2057, 2314, 2338, 2429
Bst6I	CTCTTC	2 cut(s)	437, 1646
BstACI	GRCGYC	3 cut(s)	297, 1119, 2525
BstC8I	GCNNGC	9 cut(s)	239, 273, 772, 1281, 1308, 1322, 1356, 1360, 1372
BstDEI	CTNAG	2 cut(s)	276, 2457
BstDSI	CCRYGG	1 cut(s)	360
BstENI	CCTNNNNNAGG	1 cut(s)	2482
BstF5I	GGATG	5 cut(s)	286, 1007, 1344, 1648, 2425
BstFNI	CGCG	1 cut(s)	182
BstH2I	RGCGCY	1 cut(s)	2351
BstHHI	GCGC	2 cut(s)	2350, 2550
BstKTI	GATC	8 cut(s)	376, 562, 613, 877, 946, 1057, 2002, 2238
BstMAI	GTCTC	8 cut(s)	181, 308, 587, 751, 2098, 2382, 2482, 2532
BstMBI	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
BstMWI	GCNNNNNNNGC	8 cut(s)	260, 308, 344, 353, 767, 1473, 2347, 2356
BstNI	CCWGG	3 cut(s)	1040, 1064, 1503
BstNSI	RCATGY	7 cut(s)	678, 802, 1035, 1257, 1358, 1975, 2146
BstSCI	CCNGG	3 cut(s)	1038, 1062, 1501
BstSFI	CTRYAG	1 cut(s)	324
BstSLI	GKGCMC	1 cut(s)	1180
BstUI	CGCG	1 cut(s)	182
BstV1I	GCAGC	3 cut(s)	160, 310, 1304
BstV2I	GAAGAC	1 cut(s)	2250
BstX2I	RGATCY	2 cut(s)	610, 874
BstXI	CCANNNNNNTGG	1 cut(s)	947
BstYI	RGATCY	2 cut(s)	610, 874
BstZ17I	GTATAC	1 cut(s)	967
BsuI	GTATCC	1 cut(s)	781
BsuRI	GGCC	1 cut(s)	834
BtgI	CCRYGG	1 cut(s)	360
BtgZI	GCGATG	2 cut(s)	292, 1734
BtsCI	GGATG	5 cut(s)	286, 1007, 1344, 1648, 2425
BtsIMutI	CAGTG	3 cut(s)	1255, 2425, 2543
BveI	ACCTGC	2 cut(s)	1256, 2500
Cac8I	GCNNGC	9 cut(s)	239, 273, 772, 1281, 1308, 1322, 1356, 1360, 1372
CfoI	GCGC	2 cut(s)	2350, 2550
Cfr10I	RCCGGY	1 cut(s)	578
Cfr13I	GGNCC	2 cut(s)	475, 1499
CseI	GACGC	3 cut(s)	415, 1127, 2514
Csp6I	GTAC	6 cut(s)	862, 952, 1134, 1611, 1736, 1987
CviQI	GTAC	6 cut(s)	862, 952, 1134, 1611, 1736, 1987
DdeI	CTNAG	2 cut(s)	276, 2457
DpnI	GATC	8 cut(s)	375, 561, 612, 876, 945, 1056, 2001, 2237
DpnII	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
DraIII	CACNNNGTG	1 cut(s)	2429
Eam1104I	CTCTTC	2 cut(s)	437, 1646
EarI	CTCTTC	2 cut(s)	437, 1646
EciI	GGCGGA	1 cut(s)	25
Eco130I	CCWWGG	2 cut(s)	360, 1657
Eco31I	GGTCTC	4 cut(s)	587, 751, 2098, 2482
Eco32I	GATATC	1 cut(s)	1868
Eco47I	GGWCC	2 cut(s)	475, 1499
Eco47III	AGCGCT	1 cut(s)	2349
Eco57I	CTGAAG	1 cut(s)	156
EcoNI	CCTNNNNNAGG	1 cut(s)	2482
EcoRII	CCWGG	3 cut(s)	1038, 1062, 1501
EcoRV	GATATC	1 cut(s)	1868
EcoT14I	CCWWGG	2 cut(s)	360, 1657
EcoT22I	ATGCAT	1 cut(s)	1758
ErhI	CCWWGG	2 cut(s)	360, 1657
Esp3I	CGTCTC	1 cut(s)	2532
FalI	AAGNNNNNCTT	2 cut(s)	1290, 1322
FauNDI	CATATG	1 cut(s)	763
FbaI	TGATCA	1 cut(s)	2235
FblI	GTMKAC	2 cut(s)	966, 1688
Fnu4HI	GCNGC	6 cut(s)	149, 324, 686, 1318, 1946, 2546
FokI	GGATG	5 cut(s)	293, 994, 1331, 1655, 2432
Fsp4HI	GCNGC	6 cut(s)	149, 324, 686, 1318, 1946, 2546
FspBI	CTAG	5 cut(s)	198, 272, 1658, 2219, 2351
GlaI	GCGC	2 cut(s)	2349, 2549
GluI	GCNGC	6 cut(s)	149, 324, 686, 1318, 1946, 2546
GsuI	CTGGAG	1 cut(s)	2522
HaeII	RGCGCY	1 cut(s)	2351
HaeIII	GGCC	1 cut(s)	834
HapII	CCGG	4 cut(s)	97, 333, 579, 1101
HgaI	GACGC	3 cut(s)	415, 1127, 2514
HhaI	GCGC	2 cut(s)	2350, 2550
Hin1I	GRCGYC	3 cut(s)	297, 1119, 2525
Hin6I	GCGC	2 cut(s)	2348, 2548
HinP1I	GCGC	2 cut(s)	2348, 2548
HincII	GTYRAC	1 cut(s)	1689
HindII	GTYRAC	1 cut(s)	1689
HindIII	AAGCTT	3 cut(s)	1368, 1545, 2357
HpaII	CCGG	4 cut(s)	97, 333, 579, 1101
Hpy166II	GTNNAC	4 cut(s)	433, 954, 967, 1689
Hpy188I	TCNGA	4 cut(s)	587, 728, 1872, 2061
Hpy188III	TCNNGA	8 cut(s)	230, 333, 1101, 1597, 1804, 1967, 2319, 2501
Hpy8I	GTNNAC	4 cut(s)	433, 954, 967, 1689
Hpy99I	CGWCG	4 cut(s)	69, 302, 400, 431
HpyAV	CCTTC	6 cut(s)	171, 448, 1721, 2030, 2081, 2189
HpyCH4III	ACNGT	7 cut(s)	65, 516, 920, 2057, 2314, 2338, 2429
HpyCH4IV	ACGT	3 cut(s)	297, 849, 2262
HpyF10VI	GCNNNNNNNGC	8 cut(s)	260, 308, 344, 353, 767, 1473, 2347, 2356
HpyF3I	CTNAG	2 cut(s)	276, 2457
HpySE526I	ACGT	3 cut(s)	297, 849, 2262
Hsp92I	GRCGYC	3 cut(s)	297, 1119, 2525
HspAI	GCGC	2 cut(s)	2348, 2548
Kpn2I	TCCGGA	2 cut(s)	332, 1100
Ksp22I	TGATCA	1 cut(s)	2235
Kzo9I	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
LguI	GCTCTTC	1 cut(s)	1646
LmnI	GCTCC	4 cut(s)	32, 335, 472, 1424
Lsp1109I	GCAGC	3 cut(s)	160, 310, 1304
LweI	GCATC	4 cut(s)	1147, 1319, 2410, 2428
MaeI	CTAG	5 cut(s)	198, 272, 1658, 2219, 2351
MaeII	ACGT	3 cut(s)	297, 849, 2262
MaeIII	GTNAC	7 cut(s)	71, 138, 991, 1213, 1888, 2258, 2515
MalI	GATC	8 cut(s)	375, 561, 612, 876, 945, 1056, 2001, 2237
MboI	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
MboII	GAAGA	9 cut(s)	108, 395, 454, 869, 1089, 1310, 1663, 2255, 2381
MfeI	CAATTG	1 cut(s)	2172
MflI	RGATCY	2 cut(s)	610, 874
MhlI	GDGCHC	1 cut(s)	1180
MlyI	GAGTC	4 cut(s)	98, 178, 338, 2049
MmeI	TCCRAC	2 cut(s)	117, 1095
Mph1103I	ATGCAT	1 cut(s)	1758
MroI	TCCGGA	2 cut(s)	332, 1100
MseI	TTAA	9 cut(s)	503, 852, 894, 915, 933, 1244, 1425, 1875, 1908
MspA1I	CMGCKG	2 cut(s)	998, 2159
MspI	CCGG	4 cut(s)	97, 333, 579, 1101
MspR9I	CCNGG	3 cut(s)	1040, 1064, 1503
MunI	CAATTG	1 cut(s)	2172
Mva1269I	GAATGC	1 cut(s)	1756
MvaI	CCWGG	3 cut(s)	1040, 1064, 1503
MvnI	CGCG	1 cut(s)	182
MwoI	GCNNNNNNNGC	8 cut(s)	260, 308, 344, 353, 767, 1473, 2347, 2356
NcoI	CCATGG	1 cut(s)	360
NdeI	CATATG	1 cut(s)	763
NdeII	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
NheI	GCTAGC	1 cut(s)	271
NlaIV	GGNNCC	4 cut(s)	28, 612, 1768, 2296
NmeAIII	GCCGAG	1 cut(s)	337
NmuCI	GTSAC	3 cut(s)	138, 1888, 2258
NsiI	ATGCAT	1 cut(s)	1758
NspI	RCATGY	7 cut(s)	678, 802, 1035, 1257, 1358, 1975, 2146
PaeI	GCATGC	1 cut(s)	1358
PciI	ACATGT	2 cut(s)	798, 1031
PciSI	GCTCTTC	1 cut(s)	1646
PctI	GAATGC	1 cut(s)	1756
PfeI	GAWTC	8 cut(s)	226, 400, 488, 588, 1094, 1430, 1516, 2497
PflFI	GACNNNGTC	1 cut(s)	479
PkrI	GCNGC	6 cut(s)	150, 325, 687, 1319, 1947, 2547
PleI	GAGTC	4 cut(s)	97, 178, 337, 2048
PpsI	GAGTC	4 cut(s)	97, 178, 337, 2048
PscI	ACATGT	2 cut(s)	798, 1031
PshBI	ATTAAT	2 cut(s)	503, 1244
PsiI	TTATAA	1 cut(s)	1142
Psp6I	CCWGG	3 cut(s)	1038, 1062, 1501
PspGI	CCWGG	3 cut(s)	1038, 1062, 1501
PspN4I	GGNNCC	4 cut(s)	28, 612, 1768, 2296
PspPI	GGNCC	2 cut(s)	475, 1499
PstI	CTGCAG	1 cut(s)	328
PsuI	RGATCY	2 cut(s)	610, 874
PsyI	GACNNNGTC	1 cut(s)	479
PvuII	CAGCTG	2 cut(s)	998, 2159
RsaI	GTAC	6 cut(s)	863, 953, 1135, 1612, 1737, 1988
RsaNI	GTAC	6 cut(s)	862, 952, 1134, 1611, 1736, 1987
SalI	GTCGAC	1 cut(s)	1687
SapI	GCTCTTC	1 cut(s)	1646
SaqAI	TTAA	9 cut(s)	503, 852, 894, 915, 933, 1244, 1425, 1875, 1908
SatI	GCNGC	6 cut(s)	149, 324, 686, 1318, 1946, 2546
Sau3AI	GATC	8 cut(s)	373, 559, 610, 874, 943, 1054, 1999, 2235
Sau96I	GGNCC	2 cut(s)	475, 1499
SchI	GAGTC	4 cut(s)	98, 178, 338, 2049
ScrFI	CCNGG	3 cut(s)	1040, 1064, 1503
SduI	GDGCHC	1 cut(s)	1180
SfaNI	GCATC	4 cut(s)	1147, 1319, 2410, 2428
SfcI	CTRYAG	1 cut(s)	324
SinI	GGWCC	2 cut(s)	475, 1499
SmlI	CTYRAG	2 cut(s)	242, 2009
SmoI	CTYRAG	2 cut(s)	242, 2009
SphI	GCATGC	1 cut(s)	1358
SsiI	CCGC	6 cut(s)	36, 146, 180, 686, 1814, 1945
SspI	AATATT	1 cut(s)	904
SspMI	CTAG	5 cut(s)	198, 272, 1658, 2219, 2351
StyD4I	CCNGG	3 cut(s)	1038, 1062, 1501
StyI	CCWWGG	2 cut(s)	360, 1657
TaaI	ACNGT	7 cut(s)	65, 516, 920, 2057, 2314, 2338, 2429
TaiI	ACGT	3 cut(s)	300, 852, 2265
TatI	WGTACW	1 cut(s)	1133
TauI	GCSGC	2 cut(s)	688, 1948
TfiI	GAWTC	8 cut(s)	226, 400, 488, 588, 1094, 1430, 1516, 2497
Tru1I	TTAA	9 cut(s)	503, 852, 894, 915, 933, 1244, 1425, 1875, 1908
Tru9I	TTAA	9 cut(s)	503, 852, 894, 915, 933, 1244, 1425, 1875, 1908
TscAI	CASTG	3 cut(s)	1255, 2432, 2543
TseFI	GTSAC	3 cut(s)	138, 1888, 2258
TseI	GCWGC	4 cut(s)	148, 323, 1317, 2545
Tsp45I	GTSAC	3 cut(s)	138, 1888, 2258
TspDTI	ATGAA	8 cut(s)	707, 780, 941, 1214, 1443, 1664, 2316, 2385
TspGWI	ACGGA	3 cut(s)	126, 1411, 1753
TspRI	CASTG	3 cut(s)	1255, 2432, 2543
Tth111I	GACNNNGTC	1 cut(s)	479
VpaK11BI	GGWCC	2 cut(s)	475, 1499
VspI	ATTAAT	2 cut(s)	503, 1244
XagI	CCTNNNNNAGG	1 cut(s)	2482
XapI	RAATTY	1 cut(s)	642
XceI	RCATGY	7 cut(s)	678, 802, 1035, 1257, 1358, 1975, 2146
XmaJI	CCTAGG	1 cut(s)	1657
XmiI	GTMKAC	2 cut(s)	966, 1688
XspI	CTAG	5 cut(s)	198, 272, 1658, 2219, 2351
ZraI	GACGTC	1 cut(s)	298
Zsp2I	ATGCAT	1 cut(s)	1758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.