Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009425

Physical Location & Seq

Genomic Coordinates Reverse (-)

9385216 .. 9390284

Gene Structure 5069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g15120.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGAGAGTGCTGGTGATCCTAGGCTACACCAGGTCATCAATTTCGACTCCGCCAAACCCAAACCCCAATGGCAACCACCGCTCCACCAAACCCTACAAACCCCCAATCCCCAAGCTCCTCTCCCCCTCCAAATCATCCTCCTCCTCCTCCGCCCCTCCAATAATCTCCACCCGCCCGCCGCCTCTCTTCGCCGGCACACGCTGGGACCCCCACCACACGCACCTCTCCTACTTCGCCGACCTCGCCTCCAAGCTCGCCCGCGACGGCAAGCTCCACGACTTCTCCATGCTCCTCGAGAGCGTCGTCCTCTCCGGCGTCAAGCCCTCGCAGTTCACGGCGGCGCTCCAGCTCGACATGGTCTCCAGGGGCATTTCCGGTATTTTGAAGGACGGCAAGGTCGGGGGGCTCGTCGAGGTGTTGGTGAAAGTCGCGGAGCTCGGGGTTCGGCCGGTGGAGCTGTTTGATGGCTACGCTATGGAGTTGCTCGGAGCACATTGTCTCCGGCTTTTGAAATTCAAGCAAGTTCAGGAGCTTGTTGAGCTCATGGAGGTTCTTTATGGTTTGCACTTCCCAATCAGAGAATTGGTGGACCCGTCTGAAGTCATCAAAGCATGTGTTGAGAAACGTAGGCCGAAATTGGCCATAAGGTATGCTTGTATCTTTCCACACTCGCATATGTTATTCTGTAACATTATGTATGAGTTTGGAAAGAAGAGGGCATTGGCATCTGCTTTGACAGCATATGAAGCATCCAAGGAAAAATTGAGTGGTTCTAACATGTACATCTACCGCACAATAATTGACGTCTGCGGTGTCTGTAAAGATTACATGAAATCTAGGTACATTTATGAGGACTTGCTCAAACAGAAGGTCATTCCAAATATTTATGTTTTCAACAGTCTGATGAATGTAAACTCACATGATCTGAGCTACACATTTCATGTATACAAGAGTATGCAGAATCTTGGTGTTACAGCAGATTTGGCATGTTACAATATTCTTTTGAAGGCATGCAGCCTTGCTGGAAGAGTTGATCTCGCACAAGATATCTACAAGGAAGTACAGCATTTGGAATCAACAGGAGTGTTGAAATTGGATGTTTTCACTTACAGCACTGTTGTAAAGGTCTTTTCAGATGCAAAAATGTGGCACATGGCTTTAAATGTCAAAGAAGATATGCAATCAGCAGGTGTTATACCAAATACAGTTACATGGTCATCATTCATCAGTGCCTGTGCAAATGCGGGTCTTGTTGATAAGGCAATCCAATTGTTCGAAGAGATGCTCTTGGCCAGCTGTGAGCCTAATTCACAGTGTTTTAACATCCTTCTACATGCTTGTGTGGAGGCTTGCCAATATGACAGGGCTTTTCGCCTTTTCCATTCTTTTAAGAGTAATAAACTCCAGGAGACTTTTGGCAAAAATTACAAAGGTAGTGCAGGGCTTTCTTTTAAACCCACAACTACGACATACAATACTTTGATGAAGGCCTGTGGGTCTGACTACTACCATGCAAAAGCACTGATGGATGAGATGAAAACAGTAGGTCTTTTGCCTAATCAAATAACGTGGTCGATTTTGGCTGATATCTGTGGAAGCTCAGGGAATGTTCAGGGTGCCTTGCAGATCTTGAAAAGTATGCGTGTAGCCGGTATCCAACCTGATGTTGTTGCCTATACAACAGCCATCAAGATTTGCGTAGAAAGTGAAAATTTGGACTTGGCATTGTTGCTGTTTGCAGAAATGAAAAAATATCAGATACACCCAAATTTGGTGACATATAATACACTTTTAAGGGCTCGTAGCAGATATGGTTCTGTAAGTGAAGTACAACAATGCCTGGCTATATATCAGGACATGCGGAAAGCAGGTTACAAGCCCAATGATTACTACCTTGAGCAACTAATTGAGGAATGGTGTGAAGGAGTTATACAAGACAGCTGCCCAAAACAAGGCGAGTTCAGTTACGGGGACAAAGCTGACATAGGGAGACCGGGGAGTCTGCTTCTTGAAAAAGTTGCAGAACACTTGCAACAGCATATTGCTGACACTTTAGCAGTTGACCTTCAAGGACTTACAAAGGTTGAAGCTCGGATCGTTGTTCTTGCGGTTCTGCGAATGATCAAAGAGAACTATATCTTAGGAGATTCAGTAAAAGATGACATGTTGATAATGGTAGGAGTCCATGATGAGGTTGATGGAGGCTCAACAGCTCACAATTTAGAGGTCAAAGATGCAATAACCAAGCTTCTGCAGGATGAATTGGGGCTCAAGGTTCTTTCAACAGTACCTAAAGTTGCACTTGATACTACAATAGTATCCCAGAACACTATAGATTCAGATCAAAATTTGGACGAAAAGCCATTGAGGAAGGAATTACAGCCAGAGTTGATTTATTCCACCAGAAGACCTGTGGTTCTGGAAAGGCTAAAGGTATCCAGGAAATCATTGCAACAATGGCTGCGAAAAAGAAGTTCCCTTAGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

830

Amino Acids

92.76

Weight (kDa)

8.54

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	55 - 180	3.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_long	PF17177	124 - 284	2.4e-13	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	148 - 281	4.6e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	184 - 232	5.2e-09	PPR repeat family
PPR_3	PF13812	207 - 267	7.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	215 - 246	1.1e-08	PPR repeat
PPR_2	PF13041	218 - 266	2.5e-13	PPR repeat family
PPR	PF01535	221 - 247	4.2e-07	PPR repeat
PPR_long	PF17177	312 - 453	6.5e-12	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	361 - 418	6.8e-14	Pentatricopeptide repeat domain
PPR_2	PF13041	372 - 418	3.2e-12	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02830
fragaria_vesca	FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120
malus_domestica	MD12G1126500.v1.1
prunus_persica	Prupe.6G243100_v2.0.a1
pyrus_communis	pycom12g12460
rosa_chinensis	RchiOBHm_Chr3g0468421
rosa_laevigata	RLG00000024430
rosa_multiflora	Rmu_sc0014003.1_g000015 Rmu_sc0020046.1_g000004
rosa_roxburghii	Rroxscaffold_6G00412780
rosa_rugosa	Rorug03G0095300 Rorug03G0095400
rosa_samantha	Rh3AG143100 Rh3BG165500 Rh3DG165100
rosa_wichuraiana	Rw0G014180 Rw3G013520 Rw3G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1178
AasI	GACNNNNNNGTC	2 cut(s)	395, 1998
AatII	GACGTC	1 cut(s)	807
Acc36I	ACCTGC	2 cut(s)	1178, 1859
AccB1I	GGYRCC	1 cut(s)	1616
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	945
AccII	CGCG	2 cut(s)	261, 431
AclWI	GGATC	2 cut(s)	10, 2102
AcoI	YGGCCR	3 cut(s)	446, 639, 1290
AcsI	RAATTY	4 cut(s)	512, 1711, 1768, 2347
AcuI	CTGAAG	1 cut(s)	618
AcyI	GRCGYC	2 cut(s)	315, 804
AfaI	GTAC	5 cut(s)	782, 842, 1062, 1830, 2289
AfiI	CCNNNNNNNGG	4 cut(s)	1771, 1952, 2191, 2484
AflIII	ACRYGT	2 cut(s)	777, 2163
AjnI	CCWGG	5 cut(s)	29, 362, 1404, 1839, 2438
AjuI	GAANNNNNNNTTGG	2 cut(s)	704, 736
Alw21I	GWGCWC	3 cut(s)	438, 493, 543
Alw26I	GTCTC	4 cut(s)	364, 503, 1403, 1984
AlwI	GGATC	2 cut(s)	10, 2102
AlwNI	CAGNNNCTG	1 cut(s)	1233
Ama87I	CYCGRG	2 cut(s)	293, 437
AoxI	GGCC	5 cut(s)	446, 629, 639, 1290, 1488
ApeKI	GCWGC	3 cut(s)	1014, 1941, 2461
ApoI	RAATTY	4 cut(s)	512, 1711, 1768, 2347
ArsI	GACNNNNNNTTYG	2 cut(s)	855, 887
AspA2I	CCTAGG	1 cut(s)	19
AspLEI	GCGC	1 cut(s)	343
AspS9I	GGNCC	2 cut(s)	205, 589
AsuC2I	CCSGG	1 cut(s)	1995
AsuHPI	GGTGA	3 cut(s)	25, 433, 1786
AsuII	TTCGAA	1 cut(s)	1275
AvaI	CYCGRG	2 cut(s)	293, 437
AvaII	GGWCC	2 cut(s)	205, 589
AvrII	CCTAGG	1 cut(s)	19
AxyI	CCTNAGG	1 cut(s)	2480
BaeI	ACNNNNGTAYC	2 cut(s)	2301, 2334
BalI	TGGCCA	2 cut(s)	641, 1292
BanI	GGYRCC	1 cut(s)	1616
BanII	GRGCYC	5 cut(s)	408, 438, 543, 1801, 2271
BarI	GAAGNNNNNNTAC	2 cut(s)	1914, 1946
BbsI	GAAGAC	1 cut(s)	2413
Bbv12I	GWGCWC	3 cut(s)	438, 493, 543
BbvI	GCAGC	3 cut(s)	1026, 1928, 2448
BccI	CCATC	4 cut(s)	458, 1519, 1694, 2192
BceAI	ACGGC	3 cut(s)	280, 351, 406
BciT130I	CCWGG	5 cut(s)	31, 364, 1406, 1841, 2440
BciVI	GTATCC	3 cut(s)	1664, 2329, 2446
BclI	TGATCA	1 cut(s)	2121
BcnI	CCSGG	1 cut(s)	1995
BcoDI	GTCTC	4 cut(s)	364, 503, 1403, 1984
BfaI	CTAG	2 cut(s)	20, 837
BfmI	CTRYAG	2 cut(s)	2252, 2331
BfoI	RGCGCY	1 cut(s)	344
BfuAI	ACCTGC	2 cut(s)	1178, 1859
BfuI	GTATCC	3 cut(s)	1664, 2329, 2446
BglII	AGATCT	1 cut(s)	1626
BisI	GCNGC	5 cut(s)	179, 339, 1015, 1942, 2462
BlnI	CCTAGG	1 cut(s)	19
BlsI	GCNGC	5 cut(s)	180, 340, 1016, 1943, 2463
Bme1390I	CCNGG	6 cut(s)	31, 364, 1406, 1841, 1995, 2440
Bme18I	GGWCC	2 cut(s)	205, 589
BmeT110I	CYCGRG	2 cut(s)	293, 437
BmgT120I	GGNCC	2 cut(s)	205, 589
BmiI	GGNNCC	4 cut(s)	206, 207, 591, 1618
BmrFI	CCNGG	6 cut(s)	31, 364, 1406, 1841, 1995, 2440
BmsI	GCATC	5 cut(s)	734, 758, 1126, 1272, 2224
BpiI	GAAGAC	1 cut(s)	2413
BplI	GAGNNNNNCTC	2 cut(s)	1020, 1052
BpmI	CTGGAG	3 cut(s)	329, 346, 1388
Bpu10I	CCTNAGC	1 cut(s)	1600
Bpu14I	TTCGAA	1 cut(s)	1275
BpuEI	CTTGAG	2 cut(s)	1916, 2255
BpuMI	CCSGG	1 cut(s)	1995
BsaBI	GATNNNNATC	1 cut(s)	2340
BsaHI	GRCGYC	2 cut(s)	315, 804
BsaI	GGTCTC	2 cut(s)	364, 1984
BsaJI	CCNNGG	4 cut(s)	19, 363, 753, 1994
BsaWI	WCCGGW	1 cut(s)	374
Bsc4I	CCNNNNNNNGG	4 cut(s)	1771, 1952, 2191, 2484
Bse118I	RCCGGY	3 cut(s)	191, 448, 1649
Bse21I	CCTNAGG	1 cut(s)	2480
Bse3DI	GCAATG	1 cut(s)	2447
Bse8I	GATNNNNATC	1 cut(s)	2340
BseBI	CCWGG	5 cut(s)	31, 364, 1406, 1841, 2440
BseDI	CCNNGG	4 cut(s)	19, 363, 753, 1994
BseGI	GGATG	6 cut(s)	134, 749, 1102, 1323, 1534, 2263
BseJI	GATNNNNATC	1 cut(s)	2340
BseLI	CCNNNNNNNGG	4 cut(s)	1771, 1952, 2191, 2484
BseMI	GCAATG	1 cut(s)	2447
BseMII	CTCAG	2 cut(s)	917, 1614
BseRI	GAGGAG	5 cut(s)	107, 130, 133, 136, 281
BseX3I	CGGCCG	1 cut(s)	446
BseXI	GCAGC	3 cut(s)	1026, 1928, 2448
BseYI	CCCAGC	1 cut(s)	201
BsgI	GTGCAG	1 cut(s)	1458
Bsh1236I	CGCG	2 cut(s)	261, 431
Bsh1285I	CGRYCG	1 cut(s)	449
BshFI	GGCC	5 cut(s)	448, 631, 641, 1292, 1490
BshNI	GGYRCC	1 cut(s)	1616
BsiEI	CGRYCG	1 cut(s)	449
BsiHKAI	GWGCWC	3 cut(s)	438, 493, 543
BsiHKCI	CYCGRG	2 cut(s)	293, 437
BsiSI	CCGG	7 cut(s)	192, 312, 375, 449, 502, 1650, 1994
BslFI	GGGAC	2 cut(s)	218, 1985
BslI	CCNNNNNNNGG	4 cut(s)	1771, 1952, 2191, 2484
BsmAI	GTCTC	4 cut(s)	364, 503, 1403, 1984
BsmFI	GGGAC	2 cut(s)	218, 1985
BsnI	GGCC	5 cut(s)	448, 631, 641, 1292, 1490
Bso31I	GGTCTC	2 cut(s)	364, 1984
BsoBI	CYCGRG	2 cut(s)	293, 437
Bsp119I	TTCGAA	1 cut(s)	1275
Bsp1286I	GDGCHC	6 cut(s)	408, 438, 493, 543, 1801, 2271
Bsp1407I	TGTACA	1 cut(s)	780
Bsp143I	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
BspANI	GGCC	5 cut(s)	448, 631, 641, 1292, 1490
BspCNI	CTCAG	2 cut(s)	918, 1613
BspFNI	CGCG	2 cut(s)	261, 431
BspLI	GGNNCC	4 cut(s)	206, 207, 591, 1618
BspMAI	CTGCAG	1 cut(s)	2256
BspMI	ACCTGC	2 cut(s)	1178, 1859
BspPI	GGATC	2 cut(s)	10, 2102
BspT104I	TTCGAA	1 cut(s)	1275
BspT107I	GGYRCC	1 cut(s)	1616
BspTNI	GGTCTC	2 cut(s)	364, 1984
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	2447
BsrFI	RCCGGY	3 cut(s)	191, 448, 1649
BsrGI	TGTACA	1 cut(s)	780
BssAI	RCCGGY	3 cut(s)	191, 448, 1649
BssECI	CCNNGG	4 cut(s)	19, 363, 753, 1994
BssMI	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
BssNAI	GTATAC	1 cut(s)	946
BssNI	GRCGYC	2 cut(s)	315, 804
BssT1I	CCWWGG	2 cut(s)	19, 753
Bst1107I	GTATAC	1 cut(s)	946
Bst2UI	CCWGG	5 cut(s)	31, 364, 1406, 1841, 2440
Bst4CI	ACNGT	6 cut(s)	899, 1117, 1207, 1314, 1543, 2287
Bst6I	CTCTTC	4 cut(s)	191, 707, 1021, 1272
BstACI	GRCGYC	2 cut(s)	315, 804
BstAUI	TGTACA	1 cut(s)	780
BstBI	TTCGAA	1 cut(s)	1275
BstC8I	GCNNGC	8 cut(s)	176, 193, 255, 259, 269, 1012, 1294, 1351
BstDEI	CTNAG	4 cut(s)	926, 1600, 2140, 2480
BstF5I	GGATG	6 cut(s)	134, 749, 1102, 1323, 1534, 2263
BstFNI	CGCG	2 cut(s)	261, 431
BstH2I	RGCGCY	1 cut(s)	344
BstHHI	GCGC	1 cut(s)	343
BstKTI	GATC	7 cut(s)	18, 925, 1036, 1629, 2097, 2124, 2344
BstMAI	GTCTC	4 cut(s)	364, 503, 1403, 1984
BstMBI	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
BstMCI	CGRYCG	1 cut(s)	449
BstMWI	GCNNNNNNNGC	8 cut(s)	78, 242, 454, 538, 737, 746, 983, 2458
BstNI	CCWGG	5 cut(s)	31, 364, 1406, 1841, 2440
BstNSI	RCATGY	7 cut(s)	615, 781, 990, 1014, 1337, 1861, 2167
BstSCI	CCNGG	6 cut(s)	29, 362, 1404, 1839, 1993, 2438
BstSFI	CTRYAG	2 cut(s)	2252, 2331
BstUI	CGCG	2 cut(s)	261, 431
BstV1I	GCAGC	3 cut(s)	1026, 1928, 2448
BstV2I	GAAGAC	1 cut(s)	2413
BstX2I	RGATCY	1 cut(s)	1626
BstYI	RGATCY	1 cut(s)	1626
BstZ17I	GTATAC	1 cut(s)	946
BstZI	CGGCCG	1 cut(s)	446
Bsu36I	CCTNAGG	1 cut(s)	2480
BsuI	GTATCC	3 cut(s)	1664, 2329, 2446
BsuRI	GGCC	5 cut(s)	448, 631, 641, 1292, 1490
BtsCI	GGATG	6 cut(s)	134, 749, 1102, 1323, 1534, 2263
BtsIMutI	CAGTG	4 cut(s)	1113, 1234, 1319, 1520
BveI	ACCTGC	2 cut(s)	1178, 1859
Cac8I	GCNNGC	8 cut(s)	176, 193, 255, 259, 269, 1012, 1294, 1351
CaiI	CAGNNNCTG	1 cut(s)	1233
CfoI	GCGC	1 cut(s)	343
Cfr10I	RCCGGY	3 cut(s)	191, 448, 1649
Cfr13I	GGNCC	2 cut(s)	205, 589
CseI	GACGC	2 cut(s)	289, 304
CsiI	ACCWGGT	1 cut(s)	29
Csp6I	GTAC	5 cut(s)	781, 841, 1061, 1829, 2288
CspCI	CAANNNNNGTGG	2 cut(s)	1550, 1585
CviQI	GTAC	5 cut(s)	781, 841, 1061, 1829, 2288
DdeI	CTNAG	4 cut(s)	926, 1600, 2140, 2480
DpnI	GATC	7 cut(s)	17, 924, 1035, 1628, 2096, 2123, 2343
DpnII	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
DraI	TTTAAA	2 cut(s)	1161, 1453
DrdI	GACNNNNNNGTC	2 cut(s)	395, 1998
DseDI	GACNNNNNNGTC	2 cut(s)	395, 1998
EaeI	YGGCCR	3 cut(s)	446, 639, 1290
EagI	CGGCCG	1 cut(s)	446
Eam1104I	CTCTTC	4 cut(s)	191, 707, 1021, 1272
EarI	CTCTTC	4 cut(s)	191, 707, 1021, 1272
EciI	GGCGGA	2 cut(s)	39, 139
Ecl136II	GAGCTC	2 cut(s)	436, 541
EclXI	CGGCCG	1 cut(s)	446
Eco130I	CCWWGG	2 cut(s)	19, 753
Eco147I	AGGCCT	1 cut(s)	1490
Eco24I	GRGCYC	5 cut(s)	408, 438, 543, 1801, 2271
Eco31I	GGTCTC	2 cut(s)	364, 1984
Eco32I	GATATC	2 cut(s)	1048, 1588
Eco47I	GGWCC	2 cut(s)	205, 589
Eco52I	CGGCCG	1 cut(s)	446
Eco53kI	GAGCTC	2 cut(s)	436, 541
Eco57I	CTGAAG	1 cut(s)	618
Eco81I	CCTNAGG	1 cut(s)	2480
Eco88I	CYCGRG	2 cut(s)	293, 437
EcoICRI	GAGCTC	2 cut(s)	436, 541
EcoO109I	RGGNCCY	1 cut(s)	205
EcoRII	CCWGG	5 cut(s)	29, 362, 1404, 1839, 2438
EcoRV	GATATC	2 cut(s)	1048, 1588
EcoT14I	CCWWGG	2 cut(s)	19, 753
EcoT38I	GRGCYC	5 cut(s)	408, 438, 543, 1801, 2271
ErhI	CCWWGG	2 cut(s)	19, 753
FalI	AAGNNNNNCTT	4 cut(s)	637, 669, 2286, 2318
FaqI	GGGAC	2 cut(s)	218, 1985
FauI	CCCGC	4 cut(s)	179, 183, 266, 1237
FauNDI	CATATG	2 cut(s)	675, 742
FbaI	TGATCA	1 cut(s)	2121
FblI	GTMKAC	1 cut(s)	945
Fnu4HI	GCNGC	5 cut(s)	179, 339, 1015, 1942, 2462
FokI	GGATG	6 cut(s)	121, 736, 1109, 1310, 1541, 2270
FriOI	GRGCYC	5 cut(s)	408, 438, 543, 1801, 2271
Fsp4HI	GCNGC	5 cut(s)	179, 339, 1015, 1942, 2462
FspBI	CTAG	2 cut(s)	20, 837
GlaI	GCGC	1 cut(s)	342
GluI	GCNGC	5 cut(s)	179, 339, 1015, 1942, 2462
GsaI	CCCAGC	1 cut(s)	205
GsuI	CTGGAG	3 cut(s)	329, 346, 1388
HaeII	RGCGCY	1 cut(s)	344
HaeIII	GGCC	5 cut(s)	448, 631, 641, 1292, 1490
HapII	CCGG	7 cut(s)	192, 312, 375, 449, 502, 1650, 1994
HgaI	GACGC	2 cut(s)	289, 304
HhaI	GCGC	1 cut(s)	343
Hin1I	GRCGYC	2 cut(s)	315, 804
Hin6I	GCGC	1 cut(s)	341
HinP1I	GCGC	1 cut(s)	341
HincII	GTYRAC	1 cut(s)	2062
HindII	GTYRAC	1 cut(s)	2062
HindIII	AAGCTT	1 cut(s)	2246
HinfI	GANTC	7 cut(s)	46, 961, 1073, 1999, 2147, 2181, 2336
HpaII	CCGG	7 cut(s)	192, 312, 375, 449, 502, 1650, 1994
HphI	GGTGA	3 cut(s)	25, 433, 1786
Hpy166II	GTNNAC	5 cut(s)	333, 589, 913, 946, 2062
Hpy188III	TCNNGA	7 cut(s)	295, 527, 1630, 1690, 1853, 2009, 2420
Hpy8I	GTNNAC	5 cut(s)	333, 589, 913, 946, 2062
Hpy99I	CGWCG	3 cut(s)	266, 305, 413
HpyAV	CCTTC	8 cut(s)	379, 862, 1000, 1337, 1480, 1916, 2075, 2365
HpyCH4III	ACNGT	6 cut(s)	899, 1117, 1207, 1314, 1543, 2287
HpyCH4IV	ACGT	3 cut(s)	625, 804, 1568
HpyF10VI	GCNNNNNNNGC	8 cut(s)	78, 242, 454, 538, 737, 746, 983, 2458
HpyF3I	CTNAG	4 cut(s)	926, 1600, 2140, 2480
HpySE526I	ACGT	3 cut(s)	625, 804, 1568
Hsp92I	GRCGYC	2 cut(s)	315, 804
HspAI	GCGC	1 cut(s)	341
KflI	GGGWCCC	1 cut(s)	205
KroI	GCCGGC	1 cut(s)	191
KroNI	GCCGGC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	2121
Kzo9I	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
LmnI	GCTCC	9 cut(s)	86, 120, 276, 294, 348, 433, 454, 488, 529
Lsp1109I	GCAGC	3 cut(s)	1026, 1928, 2448
LweI	GCATC	5 cut(s)	734, 758, 1126, 1272, 2224
MabI	ACCWGGT	1 cut(s)	29
MaeI	CTAG	2 cut(s)	20, 837
MaeII	ACGT	3 cut(s)	625, 804, 1568
MaeIII	GTNAC	7 cut(s)	686, 970, 989, 1207, 1774, 1871, 1964
MalI	GATC	7 cut(s)	17, 924, 1035, 1628, 2096, 2123, 2343
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
MboII	GAAGA	6 cut(s)	178, 724, 1038, 1184, 1289, 2418
MfeI	CAATTG	1 cut(s)	1268
MflI	RGATCY	1 cut(s)	1626
MhlI	GDGCHC	6 cut(s)	408, 438, 493, 543, 1801, 2271
MlsI	TGGCCA	2 cut(s)	641, 1292
MluNI	TGGCCA	2 cut(s)	641, 1292
MlyI	GAGTC	3 cut(s)	40, 2008, 2190
MmeI	TCCRAC	1 cut(s)	1681
Mox20I	TGGCCA	2 cut(s)	641, 1292
MroNI	GCCGGC	1 cut(s)	191
MscI	TGGCCA	2 cut(s)	641, 1292
MseI	TTAA	5 cut(s)	1160, 1320, 1389, 1452, 1793
MslI	CAYNNNNRTG	1 cut(s)	1338
Msp20I	TGGCCA	2 cut(s)	641, 1292
MspA1I	CMGCKG	2 cut(s)	1296, 1941
MspI	CCGG	7 cut(s)	192, 312, 375, 449, 502, 1650, 1994
MspR9I	CCNGG	6 cut(s)	31, 364, 1406, 1841, 1995, 2440
MunI	CAATTG	1 cut(s)	1268
MvaI	CCWGG	5 cut(s)	31, 364, 1406, 1841, 2440
MvnI	CGCG	2 cut(s)	261, 431
MwoI	GCNNNNNNNGC	8 cut(s)	78, 242, 454, 538, 737, 746, 983, 2458
NaeI	GCCGGC	1 cut(s)	193
NciI	CCSGG	1 cut(s)	1995
NdeI	CATATG	2 cut(s)	675, 742
NdeII	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
NgoMIV	GCCGGC	1 cut(s)	191
NlaIV	GGNNCC	4 cut(s)	206, 207, 591, 1618
NmuCI	GTSAC	1 cut(s)	1774
NspI	RCATGY	7 cut(s)	615, 781, 990, 1014, 1337, 1861, 2167
NspV	TTCGAA	1 cut(s)	1275
PaeI	GCATGC	1 cut(s)	1014
PaeR7I	CTCGAG	1 cut(s)	293
PaqCI	CACCTGC	1 cut(s)	1178
PceI	AGGCCT	1 cut(s)	1490
PciI	ACATGT	2 cut(s)	777, 2163
PcsI	WCGNNNNNNNCGW	2 cut(s)	300, 405
PdiI	GCCGGC	1 cut(s)	193
PfeI	GAWTC	4 cut(s)	961, 1073, 2147, 2336
PflFI	GACNNNGTC	1 cut(s)	356
PfoI	TCCNGGA	2 cut(s)	1404, 2438
PkrI	GCNGC	5 cut(s)	180, 340, 1016, 1943, 2463
PleI	GAGTC	3 cut(s)	40, 2007, 2189
PpsI	GAGTC	3 cut(s)	40, 2007, 2189
PpuMI	RGGWCCY	1 cut(s)	205
PscI	ACATGT	2 cut(s)	777, 2163
Psp124BI	GAGCTC	2 cut(s)	438, 543
Psp5II	RGGWCCY	1 cut(s)	205
Psp6I	CCWGG	5 cut(s)	29, 362, 1404, 1839, 2438
PspFI	CCCAGC	1 cut(s)	201
PspGI	CCWGG	5 cut(s)	29, 362, 1404, 1839, 2438
PspN4I	GGNNCC	4 cut(s)	206, 207, 591, 1618
PspPI	GGNCC	2 cut(s)	205, 589
PspPPI	RGGWCCY	1 cut(s)	205
PstI	CTGCAG	1 cut(s)	2256
PstNI	CAGNNNCTG	1 cut(s)	1233
PsuI	RGATCY	1 cut(s)	1626
PsyI	GACNNNGTC	1 cut(s)	356
PvuII	CAGCTG	2 cut(s)	1296, 1941
RsaI	GTAC	5 cut(s)	782, 842, 1062, 1830, 2289
RsaNI	GTAC	5 cut(s)	781, 841, 1061, 1829, 2288
RseI	CAYNNNNRTG	1 cut(s)	1338
SacI	GAGCTC	2 cut(s)	438, 543
SaqAI	TTAA	5 cut(s)	1160, 1320, 1389, 1452, 1793
SatI	GCNGC	5 cut(s)	179, 339, 1015, 1942, 2462
Sau3AI	GATC	7 cut(s)	15, 922, 1033, 1626, 2094, 2121, 2341
Sau96I	GGNCC	2 cut(s)	205, 589
SchI	GAGTC	3 cut(s)	40, 2008, 2190
ScrFI	CCNGG	6 cut(s)	31, 364, 1406, 1841, 1995, 2440
SduI	GDGCHC	6 cut(s)	408, 438, 493, 543, 1801, 2271
SexAI	ACCWGGT	1 cut(s)	29
SfaNI	GCATC	5 cut(s)	734, 758, 1126, 1272, 2224
SfcI	CTRYAG	2 cut(s)	2252, 2331
Sfr274I	CTCGAG	1 cut(s)	293
SfuI	TTCGAA	1 cut(s)	1275
SinI	GGWCC	2 cut(s)	205, 589
SlaI	CTCGAG	1 cut(s)	293
SmiMI	CAYNNNNRTG	1 cut(s)	1338
SmlI	CTYRAG	3 cut(s)	293, 1895, 2270
SmoI	CTYRAG	3 cut(s)	293, 1895, 2270
SphI	GCATGC	1 cut(s)	1014
SseBI	AGGCCT	1 cut(s)	1490
SspI	AATATT	2 cut(s)	883, 997
SspMI	CTAG	2 cut(s)	20, 837
SstI	GAGCTC	2 cut(s)	438, 543
StuI	AGGCCT	1 cut(s)	1490
StyD4I	CCNGG	6 cut(s)	29, 362, 1404, 1839, 1993, 2438
StyI	CCWWGG	2 cut(s)	19, 753
TaaI	ACNGT	6 cut(s)	899, 1117, 1207, 1314, 1543, 2287
TaiI	ACGT	3 cut(s)	628, 807, 1571
TaqI	TCGA	6 cut(s)	44, 294, 351, 411, 1275, 1574
TatI	WGTACW	3 cut(s)	780, 1060, 1828
TauI	GCSGC	2 cut(s)	181, 341
TfiI	GAWTC	4 cut(s)	961, 1073, 2147, 2336
Tru1I	TTAA	5 cut(s)	1160, 1320, 1389, 1452, 1793
Tru9I	TTAA	5 cut(s)	1160, 1320, 1389, 1452, 1793
TscAI	CASTG	4 cut(s)	1120, 1234, 1319, 1527
TseFI	GTSAC	1 cut(s)	1774
TseI	GCWGC	3 cut(s)	1014, 1941, 2461
Tsp45I	GTSAC	1 cut(s)	1774
TspDTI	ATGAA	9 cut(s)	759, 845, 920, 929, 1213, 1499, 1550, 1760, 2274
TspRI	CASTG	4 cut(s)	1120, 1234, 1319, 1527
Tth111I	GACNNNGTC	1 cut(s)	356
VpaK11BI	GGWCC	2 cut(s)	205, 589
XapI	RAATTY	4 cut(s)	512, 1711, 1768, 2347
XceI	RCATGY	7 cut(s)	615, 781, 990, 1014, 1337, 1861, 2167
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1412, 2410
XhoI	CTCGAG	1 cut(s)	293
XmaJI	CCTAGG	1 cut(s)	19
XmiI	GTMKAC	1 cut(s)	945
XspI	CTAG	2 cut(s)	20, 837
ZraI	GACGTC	1 cut(s)	805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.