Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014003.1

Orthogroup ID

OG0009425

Physical Location & Seq

Genomic Coordinates Reverse (-)

41961 .. 47164

Gene Structure 5204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014003.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

atgagagtgttggtcatccttggctacactagctcttcaatctccactcccccaaatcccaatggcaaccgctccaccaaaccctacaagcccccaatccccaagctctccccctccaaatcctcccctccaatctccaccctccattcccggccgccgcctctcttcgccggccgctgggacccccacaacacccacctctcctacttcgccgacctcgcctccaagctcgcccgcgacggcaagctcgacgacttcgccatgatcgccgagagcgtcgtcctctccggcgtcaagccctcgcagttcgccgccgcgctcaaggtcgacatggtcgccaggggcatttccgggtttttgaaggaggggaaggtcaggcgcgtcgtggaggtgttgaccaaagttgacgagcttggggttcggccgctggagctgtttgatggctacgctatggagttgctggcaggacattgtcagcgccttttgaaattcaagcaagttcaggaacttgttgagcttatggaggttctttcaggtttgcatttcccaatcaaagaactggtggagccatctgaagtcatcaaaacatgtgtcgataaacgtagcccgaaattggccataaggtatgcttgtatttttccacatgcacatatcttattctgtaacattatgaatgagtttggaaagaggagggcattggcgtctgctttgacagcatatgaagcatcaaaggaaaaattgagtggttctaatatgtacatctaccgcacaataattgacgtctgtggtgtctgcaaagactacatgaaatctaggtacatttatgaggacttgctcaaacagaaggtcattccgaatatatatgttttcaacagtctgatgaatgtgaactcacatgatctgagctacacatttcatgtatacaagagtatgcagaatcttggtgtcaaagcagatttggcatgttacaatattcttttgaaggcatgctgtctcgctggaagagttgatctggcacatgatatttacagggaagtacagcatttggaatcgacaggaatgttgaaattggatgtcttcacttacagcactattgtaaaggtcttttcagatgcaaaaatgtggcacatggctttaaatgtcaaagaagatatgctagcagcaggtgttatgccaaatacaattacatggtcatcattgatcagtgcctgtgcaaatgcaggtcttgtggataaggcaattcaattgtttgaagagatgctcttgaccggctgtgaacctaattcacagtgttttaacatccttctgcatgcttgtgttgaggcttgccagtatgacagggcttttcgccttttccattcttttaagagtaataaggtccaggagacttttggcaaaaactacaaagggctttcttttaaacccacaactacaacatacaatactttgatgaaggcctgtgggtctgactactaccacgcaagagcactgatggatgagatgaaaacagtaggtctttttcctaatcaaataacatggtcgattttggctgatatctgtggaagctcggggaatgttgagggtgccttgcagatcttgaaaagtatgcgtgtagctgggatccaacctgatgttgttgcctatacaacagccatcaagatctgcgtggaaagtgaaaatctggacttagcattgtcgctttttgcagaaatgaaaaagtatcagatacacccaaatttggtgacatataatacacttttaagggctcgtagcagatatggttctgtaagtgaagtacaacaatgcctggctatatatcaggacatgcggaaagcaggttacaagcccaatgattattaccttaagcaactaattgaggagtggtgtgaaggagttatacaaggcagcagcccgaaacaaggtgagttcagttactgggacaaagctgacatagggagacctggaagtctgcttcttgaaaaagttgcagaacacctacaacagcatattgctgacactttagcagttgaccttcaaggacttacaaaggttgaagctcggatcgttgttcttgctgttctgcgaatgatcaaagagaactataccttaggagattcggtaaaagatgacatgttgatcatggtaggagtccatgatgaggttgatggaggctcaacagctcaaaatttagaggtcatagatgcaataaccaagcttctacaggatgaattggggctcaaggttctttcaacagtacctaaagttgcacttgatactacaatagtatccgagaacaatatagattcggatcaaaatttggaagaaaagccagtaaggaatgaattacactcagagttgatttattccactagaagacccgtggttctggaaaggctaaaggtatccaggaaatcattgcaacaatggctgcgaaaaagaagttcccttaggaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

818

Amino Acids

91.8

Weight (kDa)

8.48

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02830
fragaria_vesca	FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120
malus_domestica	MD12G1126500.v1.1
prunus_persica	Prupe.6G243100_v2.0.a1
pyrus_communis	pycom12g12460
rosa_chinensis	RchiOBHm_Chr3g0468421
rosa_laevigata	RLG00000024430
rosa_multiflora	Rmu_sc0014003.1_g000015 Rmu_sc0020046.1_g000004
rosa_roxburghii	Rroxscaffold_6G00412780
rosa_rugosa	Rorug03G0095300 Rorug03G0095400
rosa_samantha	Rh3AG143100 Rh3BG165500 Rh3DG165100
rosa_wichuraiana	Rw0G014180 Rw3G013520 Rw3G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1154
AasI	GACNNNNNNGTC	1 cut(s)	1965
AatII	GACGTC	1 cut(s)	783
Acc36I	ACCTGC	3 cut(s)	1154, 1211, 1826
AccB1I	GGYRCC	1 cut(s)	1583
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	2 cut(s)	327, 921
AccII	CGCG	3 cut(s)	237, 317, 381
AclWI	GGATC	4 cut(s)	1615, 1628, 2069, 2316
AcoI	YGGCCR	4 cut(s)	152, 172, 422, 615
AcsI	RAATTY	4 cut(s)	488, 1735, 2185, 2314
AcuI	CTGAAG	1 cut(s)	594
AcyI	GRCGYC	3 cut(s)	291, 701, 780
AfaI	GTAC	5 cut(s)	758, 818, 1038, 1797, 2256
AfiI	CCNNNNNNNGG	6 cut(s)	177, 613, 1738, 1919, 2158, 2451
AflII	CTTAAG	1 cut(s)	1862
AflIII	ACRYGT	2 cut(s)	587, 2130
AjnI	CCWGG	5 cut(s)	338, 1380, 1806, 1960, 2405
Alw21I	GWGCWC	1 cut(s)	1489
Alw26I	GTCTC	3 cut(s)	998, 1379, 1951
AlwI	GGATC	4 cut(s)	1615, 1628, 2069, 2316
AlwNI	CAGNNNCTG	2 cut(s)	1209, 1935
Ama87I	CYCGRG	1 cut(s)	1567
AoxI	GGCC	5 cut(s)	152, 172, 422, 615, 1455
ApeKI	GCWGC	4 cut(s)	1160, 1905, 1908, 2428
ApoI	RAATTY	4 cut(s)	488, 1735, 2185, 2314
ArsI	GACNNNNNNTTYG	4 cut(s)	576, 608, 831, 863
AspLEI	GCGC	3 cut(s)	319, 381, 480
AspS9I	GGNCC	2 cut(s)	181, 1378
AsuC2I	CCSGG	2 cut(s)	151, 352
AsuHPI	GGTGA	2 cut(s)	1753, 1934
AsuNHI	GCTAGC	1 cut(s)	1156
AvaI	CYCGRG	1 cut(s)	1567
AvaII	GGWCC	2 cut(s)	181, 1378
AxyI	CCTNAGG	2 cut(s)	2107, 2447
BaeI	ACNNNNGTAYC	2 cut(s)	2268, 2301
BalI	TGGCCA	1 cut(s)	617
BamHI	GGATCC	1 cut(s)	1620
BanI	GGYRCC	1 cut(s)	1583
BanII	GRGCYC	2 cut(s)	1768, 2238
BarI	GAAGNNNNNNTAC	2 cut(s)	1881, 1913
BbsI	GAAGAC	2 cut(s)	1069, 2380
Bbv12I	GWGCWC	1 cut(s)	1489
BbvI	GCAGC	4 cut(s)	1172, 1917, 1920, 2415
BccI	CCATC	5 cut(s)	434, 577, 1486, 1661, 2159
BceAI	ACGGC	1 cut(s)	256
BciT130I	CCWGG	5 cut(s)	340, 1382, 1808, 1962, 2407
BciVI	GTATCC	2 cut(s)	2296, 2413
BclI	TGATCA	3 cut(s)	1200, 2088, 2136
BcnI	CCSGG	2 cut(s)	151, 352
BcoDI	GTCTC	3 cut(s)	998, 1379, 1951
BfaI	CTAG	4 cut(s)	30, 813, 1157, 2370
BfmI	CTRYAG	1 cut(s)	2219
BfoI	RGCGCY	1 cut(s)	481
BfrI	CTTAAG	1 cut(s)	1862
BfuAI	ACCTGC	3 cut(s)	1154, 1211, 1826
BfuI	GTATCC	2 cut(s)	2296, 2413
BglII	AGATCT	2 cut(s)	1593, 1659
Bme1390I	CCNGG	7 cut(s)	151, 340, 352, 1382, 1808, 1962, 2407
Bme18I	GGWCC	2 cut(s)	181, 1378
BmeT110I	CYCGRG	1 cut(s)	1567
BmgT120I	GGNCC	2 cut(s)	181, 1378
BmiI	GGNNCC	5 cut(s)	182, 183, 567, 1585, 1622
BmrFI	CCNGG	7 cut(s)	151, 340, 352, 1382, 1808, 1962, 2407
BmrI	ACTGGG	1 cut(s)	1945
BmsI	GCATC	4 cut(s)	734, 1102, 1248, 2191
BmtI	GCTAGC	1 cut(s)	1160
BmuI	ACTGGG	1 cut(s)	1945
BpiI	GAAGAC	2 cut(s)	1069, 2380
BpmI	CTGGAG	1 cut(s)	449
BpuEI	CTTGAG	2 cut(s)	305, 2222
BpuMI	CCSGG	2 cut(s)	151, 352
BsaBI	GATNNNNATC	1 cut(s)	2307
BsaHI	GRCGYC	3 cut(s)	291, 701, 780
BsaI	GGTCTC	1 cut(s)	1951
BsaJI	CCNNGG	3 cut(s)	19, 339, 2379
BsaXI	ACNNNNNCTCC	4 cut(s)	206, 236, 2103, 2133
Bsc4I	CCNNNNNNNGG	6 cut(s)	177, 613, 1738, 1919, 2158, 2451
Bse118I	RCCGGY	2 cut(s)	170, 1268
Bse1I	ACTGG	4 cut(s)	564, 1330, 1940, 2330
Bse21I	CCTNAGG	2 cut(s)	2107, 2447
Bse3DI	GCAATG	1 cut(s)	2414
Bse8I	GATNNNNATC	1 cut(s)	2307
BseBI	CCWGG	5 cut(s)	340, 1382, 1808, 1962, 2407
BseDI	CCNNGG	3 cut(s)	19, 339, 2379
BseGI	GGATG	5 cut(s)	15, 1078, 1299, 1501, 2230
BseJI	GATNNNNATC	1 cut(s)	2307
BseLI	CCNNNNNNNGG	6 cut(s)	177, 613, 1738, 1919, 2158, 2451
BseMI	GCAATG	1 cut(s)	2414
BseMII	CTCAG	2 cut(s)	893, 2364
BseNI	ACTGG	4 cut(s)	564, 1330, 1940, 2330
BseRI	GAGGAG	2 cut(s)	703, 1892
BseX3I	CGGCCG	3 cut(s)	152, 172, 422
BseXI	GCAGC	4 cut(s)	1172, 1917, 1920, 2415
BseYI	CCCAGC	2 cut(s)	177, 1616
Bsh1236I	CGCG	3 cut(s)	237, 317, 381
Bsh1285I	CGRYCG	3 cut(s)	155, 175, 425
BshFI	GGCC	5 cut(s)	154, 174, 424, 617, 1457
BshNI	GGYRCC	1 cut(s)	1583
BsiEI	CGRYCG	3 cut(s)	155, 175, 425
BsiHKAI	GWGCWC	1 cut(s)	1489
BsiHKCI	CYCGRG	1 cut(s)	1567
BsiSI	CCGG	5 cut(s)	151, 171, 288, 351, 1269
BslFI	GGGAC	2 cut(s)	194, 1952
BslI	CCNNNNNNNGG	6 cut(s)	177, 613, 1738, 1919, 2158, 2451
BsmAI	GTCTC	3 cut(s)	998, 1379, 1951
BsmFI	GGGAC	2 cut(s)	194, 1952
BsnI	GGCC	5 cut(s)	154, 174, 424, 617, 1457
Bso31I	GGTCTC	1 cut(s)	1951
BsoBI	CYCGRG	1 cut(s)	1567
Bsp1286I	GDGCHC	3 cut(s)	1489, 1768, 2238
Bsp1407I	TGTACA	1 cut(s)	756
BspANI	GGCC	5 cut(s)	154, 174, 424, 617, 1457
BspCNI	CTCAG	2 cut(s)	894, 2363
BspFNI	CGCG	3 cut(s)	237, 317, 381
BspLI	GGNNCC	5 cut(s)	182, 183, 567, 1585, 1622
BspMI	ACCTGC	3 cut(s)	1154, 1211, 1826
BspOI	GCTAGC	1 cut(s)	1160
BspPI	GGATC	4 cut(s)	1615, 1628, 2069, 2316
BspQI	GCTCTTC	1 cut(s)	40
BspT107I	GGYRCC	1 cut(s)	1583
BspTI	CTTAAG	1 cut(s)	1862
BspTNI	GGTCTC	1 cut(s)	1951
BsrBI	CCGCTC	1 cut(s)	72
BsrDI	GCAATG	1 cut(s)	2414
BsrFI	RCCGGY	2 cut(s)	170, 1268
BsrGI	TGTACA	1 cut(s)	756
BsrI	ACTGG	4 cut(s)	564, 1330, 1940, 2330
BssAI	RCCGGY	2 cut(s)	170, 1268
BssECI	CCNNGG	3 cut(s)	19, 339, 2379
BssNAI	GTATAC	1 cut(s)	922
BssNI	GRCGYC	3 cut(s)	291, 701, 780
BssT1I	CCWWGG	1 cut(s)	19
Bst1107I	GTATAC	1 cut(s)	922
Bst2UI	CCWGG	5 cut(s)	340, 1382, 1808, 1962, 2407
Bst4CI	ACNGT	4 cut(s)	875, 1290, 1510, 2254
Bst6I	CTCTTC	4 cut(s)	40, 170, 997, 1248
BstACI	GRCGYC	3 cut(s)	291, 701, 780
BstAFI	CTTAAG	1 cut(s)	1862
BstAUI	TGTACA	1 cut(s)	756
BstC8I	GCNNGC	9 cut(s)	172, 231, 235, 245, 462, 988, 1158, 1311, 1327
BstDEI	CTNAG	5 cut(s)	902, 1687, 2107, 2350, 2447
BstDSI	CCRYGG	1 cut(s)	2379
BstF5I	GGATG	5 cut(s)	15, 1078, 1299, 1501, 2230
BstFNI	CGCG	3 cut(s)	237, 317, 381
BstH2I	RGCGCY	1 cut(s)	481
BstHHI	GCGC	3 cut(s)	319, 381, 480
BstMAI	GTCTC	3 cut(s)	998, 1379, 1951
BstMCI	CGRYCG	3 cut(s)	155, 175, 425
BstMWI	GCNNNNNNNGC	8 cut(s)	30, 218, 266, 430, 713, 722, 959, 2425
BstNI	CCWGG	5 cut(s)	340, 1382, 1808, 1962, 2407
BstNSI	RCATGY	7 cut(s)	591, 647, 966, 990, 1313, 1828, 2134
BstSCI	CCNGG	7 cut(s)	149, 338, 350, 1380, 1806, 1960, 2405
BstSFI	CTRYAG	1 cut(s)	2219
BstUI	CGCG	3 cut(s)	237, 317, 381
BstV1I	GCAGC	4 cut(s)	1172, 1917, 1920, 2415
BstV2I	GAAGAC	2 cut(s)	1069, 2380
BstX2I	RGATCY	3 cut(s)	1593, 1620, 1659
BstYI	RGATCY	3 cut(s)	1593, 1620, 1659
BstZ17I	GTATAC	1 cut(s)	922
BstZI	CGGCCG	3 cut(s)	152, 172, 422
Bsu36I	CCTNAGG	2 cut(s)	2107, 2447
BsuI	GTATCC	2 cut(s)	2296, 2413
BsuRI	GGCC	5 cut(s)	154, 174, 424, 617, 1457
BtgI	CCRYGG	1 cut(s)	2379
BtsCI	GGATG	5 cut(s)	15, 1078, 1299, 1501, 2230
BtsIMutI	CAGTG	3 cut(s)	1210, 1295, 1487
BveI	ACCTGC	3 cut(s)	1154, 1211, 1826
Cac8I	GCNNGC	9 cut(s)	172, 231, 235, 245, 462, 988, 1158, 1311, 1327
CaiI	CAGNNNCTG	2 cut(s)	1209, 1935
CfoI	GCGC	3 cut(s)	319, 381, 480
Cfr10I	RCCGGY	2 cut(s)	170, 1268
Cfr13I	GGNCC	2 cut(s)	181, 1378
CseI	GACGC	4 cut(s)	265, 280, 370, 690
Csp6I	GTAC	5 cut(s)	757, 817, 1037, 1796, 2255
CviQI	GTAC	5 cut(s)	757, 817, 1037, 1796, 2255
DdeI	CTNAG	5 cut(s)	902, 1687, 2107, 2350, 2447
DraI	TTTAAA	2 cut(s)	1137, 1420
DrdI	GACNNNNNNGTC	1 cut(s)	1965
DseDI	GACNNNNNNGTC	1 cut(s)	1965
EaeI	YGGCCR	4 cut(s)	152, 172, 422, 615
EagI	CGGCCG	3 cut(s)	152, 172, 422
Eam1104I	CTCTTC	4 cut(s)	40, 170, 997, 1248
EarI	CTCTTC	4 cut(s)	40, 170, 997, 1248
EclXI	CGGCCG	3 cut(s)	152, 172, 422
Eco130I	CCWWGG	1 cut(s)	19
Eco147I	AGGCCT	1 cut(s)	1457
Eco24I	GRGCYC	2 cut(s)	1768, 2238
Eco31I	GGTCTC	1 cut(s)	1951
Eco32I	GATATC	1 cut(s)	1555
Eco47I	GGWCC	2 cut(s)	181, 1378
Eco52I	CGGCCG	3 cut(s)	152, 172, 422
Eco57I	CTGAAG	1 cut(s)	594
Eco81I	CCTNAGG	2 cut(s)	2107, 2447
Eco88I	CYCGRG	1 cut(s)	1567
EcoO109I	RGGNCCY	1 cut(s)	181
EcoRII	CCWGG	5 cut(s)	338, 1380, 1806, 1960, 2405
EcoRV	GATATC	1 cut(s)	1555
EcoT14I	CCWWGG	1 cut(s)	19
EcoT38I	GRGCYC	2 cut(s)	1768, 2238
ErhI	CCWWGG	1 cut(s)	19
FalI	AAGNNNNNCTT	4 cut(s)	613, 645, 2253, 2285
FaqI	GGGAC	2 cut(s)	194, 1952
FauI	CCCGC	1 cut(s)	242
FauNDI	CATATG	1 cut(s)	718
FbaI	TGATCA	3 cut(s)	1200, 2088, 2136
FblI	GTMKAC	2 cut(s)	327, 921
FokI	GGATG	5 cut(s)	2, 1085, 1286, 1508, 2237
FriOI	GRGCYC	2 cut(s)	1768, 2238
FspBI	CTAG	4 cut(s)	30, 813, 1157, 2370
GlaI	GCGC	3 cut(s)	318, 380, 479
GsaI	CCCAGC	2 cut(s)	181, 1620
GsuI	CTGGAG	1 cut(s)	449
HaeII	RGCGCY	1 cut(s)	481
HaeIII	GGCC	5 cut(s)	154, 174, 424, 617, 1457
HapII	CCGG	5 cut(s)	151, 171, 288, 351, 1269
HgaI	GACGC	4 cut(s)	265, 280, 370, 690
HhaI	GCGC	3 cut(s)	319, 381, 480
Hin1I	GRCGYC	3 cut(s)	291, 701, 780
Hin6I	GCGC	3 cut(s)	317, 379, 478
HinP1I	GCGC	3 cut(s)	317, 379, 478
HincII	GTYRAC	4 cut(s)	328, 396, 406, 2029
HindII	GTYRAC	4 cut(s)	328, 396, 406, 2029
HindIII	AAGCTT	1 cut(s)	2213
HinfI	GANTC	5 cut(s)	937, 1049, 2114, 2148, 2303
HpaII	CCGG	5 cut(s)	151, 171, 288, 351, 1269
HphI	GGTGA	2 cut(s)	1753, 1934
Hpy166II	GTNNAC	7 cut(s)	328, 396, 406, 889, 922, 1277, 2029
Hpy188III	TCNNGA	8 cut(s)	503, 1264, 1597, 1657, 1682, 1820, 1976, 2387
Hpy8I	GTNNAC	7 cut(s)	328, 396, 406, 889, 922, 1277, 2029
Hpy99I	CGWCG	4 cut(s)	242, 254, 281, 386
HpyAV	CCTTC	8 cut(s)	355, 364, 838, 976, 1313, 1447, 1883, 2042
HpyCH4III	ACNGT	4 cut(s)	875, 1290, 1510, 2254
HpyCH4IV	ACGT	2 cut(s)	601, 780
HpyF10VI	GCNNNNNNNGC	8 cut(s)	30, 218, 266, 430, 713, 722, 959, 2425
HpyF3I	CTNAG	5 cut(s)	902, 1687, 2107, 2350, 2447
HpySE526I	ACGT	2 cut(s)	601, 780
Hsp92I	GRCGYC	3 cut(s)	291, 701, 780
HspAI	GCGC	3 cut(s)	317, 379, 478
KflI	GGGWCCC	1 cut(s)	181
KroI	GCCGGC	1 cut(s)	170
KroNI	GCCGGC	1 cut(s)	172
Ksp22I	TGATCA	3 cut(s)	1200, 2088, 2136
LguI	GCTCTTC	1 cut(s)	40
LmnI	GCTCC	3 cut(s)	77, 430, 565
Lsp1109I	GCAGC	4 cut(s)	1172, 1917, 1920, 2415
LweI	GCATC	4 cut(s)	734, 1102, 1248, 2191
MaeI	CTAG	4 cut(s)	30, 813, 1157, 2370
MaeII	ACGT	2 cut(s)	601, 780
MaeIII	GTNAC	5 cut(s)	662, 965, 1741, 1838, 1931
MbiI	CCGCTC	1 cut(s)	72
MboII	GAAGA	8 cut(s)	27, 157, 1014, 1069, 1160, 1265, 2333, 2385
MfeI	CAATTG	1 cut(s)	1244
MflI	RGATCY	3 cut(s)	1593, 1620, 1659
MhlI	GDGCHC	3 cut(s)	1489, 1768, 2238
MlsI	TGGCCA	1 cut(s)	617
MluNI	TGGCCA	1 cut(s)	617
MlyI	GAGTC	1 cut(s)	2157
MmeI	TCCRAC	1 cut(s)	1648
Mox20I	TGGCCA	1 cut(s)	617
MroNI	GCCGGC	1 cut(s)	170
MscI	TGGCCA	1 cut(s)	617
MseI	TTAA	6 cut(s)	1136, 1296, 1365, 1419, 1760, 1863
MslI	CAYNNNNRTG	1 cut(s)	1314
Msp20I	TGGCCA	1 cut(s)	617
MspA1I	CMGCKG	2 cut(s)	177, 427
MspCI	CTTAAG	1 cut(s)	1862
MspI	CCGG	5 cut(s)	151, 171, 288, 351, 1269
MspR9I	CCNGG	7 cut(s)	151, 340, 352, 1382, 1808, 1962, 2407
MunI	CAATTG	1 cut(s)	1244
MvaI	CCWGG	5 cut(s)	340, 1382, 1808, 1962, 2407
MvnI	CGCG	3 cut(s)	237, 317, 381
MwoI	GCNNNNNNNGC	8 cut(s)	30, 218, 266, 430, 713, 722, 959, 2425
NaeI	GCCGGC	1 cut(s)	172
NciI	CCSGG	2 cut(s)	151, 352
NdeI	CATATG	1 cut(s)	718
NgoMIV	GCCGGC	1 cut(s)	170
NheI	GCTAGC	1 cut(s)	1156
NlaIV	GGNNCC	5 cut(s)	182, 183, 567, 1585, 1622
NmeAIII	GCCGAG	1 cut(s)	295
NmuCI	GTSAC	1 cut(s)	1741
NspI	RCATGY	7 cut(s)	591, 647, 966, 990, 1313, 1828, 2134
PaeI	GCATGC	2 cut(s)	990, 1313
PaqCI	CACCTGC	1 cut(s)	1154
PceI	AGGCCT	1 cut(s)	1457
PciI	ACATGT	2 cut(s)	587, 2130
PciSI	GCTCTTC	1 cut(s)	40
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 273
PdiI	GCCGGC	1 cut(s)	172
PfeI	GAWTC	4 cut(s)	937, 1049, 2114, 2303
PflFI	GACNNNGTC	2 cut(s)	332, 471
PfoI	TCCNGGA	2 cut(s)	1380, 2405
PleI	GAGTC	1 cut(s)	2156
PpsI	GAGTC	1 cut(s)	2156
PpuMI	RGGWCCY	1 cut(s)	181
PscI	ACATGT	2 cut(s)	587, 2130
Psp5II	RGGWCCY	1 cut(s)	181
Psp6I	CCWGG	5 cut(s)	338, 1380, 1806, 1960, 2405
PspFI	CCCAGC	2 cut(s)	177, 1616
PspGI	CCWGG	5 cut(s)	338, 1380, 1806, 1960, 2405
PspN4I	GGNNCC	5 cut(s)	182, 183, 567, 1585, 1622
PspPI	GGNCC	2 cut(s)	181, 1378
PspPPI	RGGWCCY	1 cut(s)	181
PstNI	CAGNNNCTG	2 cut(s)	1209, 1935
PsuI	RGATCY	3 cut(s)	1593, 1620, 1659
PsyI	GACNNNGTC	2 cut(s)	332, 471
RsaI	GTAC	5 cut(s)	758, 818, 1038, 1797, 2256
RsaNI	GTAC	5 cut(s)	757, 817, 1037, 1796, 2255
RseI	CAYNNNNRTG	1 cut(s)	1314
SalI	GTCGAC	1 cut(s)	326
SapI	GCTCTTC	1 cut(s)	40
SaqAI	TTAA	6 cut(s)	1136, 1296, 1365, 1419, 1760, 1863
Sau96I	GGNCC	2 cut(s)	181, 1378
SchI	GAGTC	1 cut(s)	2157
ScrFI	CCNGG	7 cut(s)	151, 340, 352, 1382, 1808, 1962, 2407
SduI	GDGCHC	3 cut(s)	1489, 1768, 2238
SfaNI	GCATC	4 cut(s)	734, 1102, 1248, 2191
SfcI	CTRYAG	1 cut(s)	2219
SinI	GGWCC	2 cut(s)	181, 1378
SmiMI	CAYNNNNRTG	1 cut(s)	1314
SmlI	CTYRAG	3 cut(s)	320, 1862, 2237
SmoI	CTYRAG	3 cut(s)	320, 1862, 2237
SphI	GCATGC	2 cut(s)	990, 1313
SseBI	AGGCCT	1 cut(s)	1457
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	4 cut(s)	30, 813, 1157, 2370
StuI	AGGCCT	1 cut(s)	1457
StyD4I	CCNGG	7 cut(s)	149, 338, 350, 1380, 1806, 1960, 2405
StyI	CCWWGG	1 cut(s)	19
TaaI	ACNGT	4 cut(s)	875, 1290, 1510, 2254
TaiI	ACGT	2 cut(s)	604, 783
TaqI	TCGA	5 cut(s)	249, 327, 594, 1052, 1541
TatI	WGTACW	3 cut(s)	756, 1036, 1795
TauI	GCSGC	6 cut(s)	157, 160, 177, 314, 317, 427
TfiI	GAWTC	4 cut(s)	937, 1049, 2114, 2303
Tru1I	TTAA	6 cut(s)	1136, 1296, 1365, 1419, 1760, 1863
Tru9I	TTAA	6 cut(s)	1136, 1296, 1365, 1419, 1760, 1863
TscAI	CASTG	3 cut(s)	1210, 1295, 1494
TseFI	GTSAC	1 cut(s)	1741
TseI	GCWGC	4 cut(s)	1160, 1905, 1908, 2428
Tsp45I	GTSAC	1 cut(s)	1741
TspRI	CASTG	3 cut(s)	1210, 1295, 1494
Tth111I	GACNNNGTC	2 cut(s)	332, 471
Vha464I	CTTAAG	1 cut(s)	1862
VpaK11BI	GGWCC	2 cut(s)	181, 1378
XapI	RAATTY	4 cut(s)	488, 1735, 2185, 2314
XceI	RCATGY	7 cut(s)	591, 647, 966, 990, 1313, 1828, 2134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1388
XmiI	GTMKAC	2 cut(s)	327, 921
XspI	CTAG	4 cut(s)	30, 813, 1157, 2370
ZraI	GACGTC	1 cut(s)	781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.