Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00634

Orthogroup ID

OG0009425

Physical Location & Seq

Genomic Coordinates Reverse (-)

65539 .. 68534

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G014180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGCAACCGCTCCACCAAACCCTACAAGCCCCCAATCCCCAAGCTCTCCCCCTCCAAATCCTCCCCTCCAATCCTCCACCCTCCATTCCCGGCCGCCGCCTCTCTTCGCCGGCCGCTGGGACCCCCACAACACCCACCTCTCCTACTTCGCCGACCTCGCCTCCAAGCTCGCCCGCGACGGCAAGCTCGACGACTTCGCCATGATCGCCGAGAGCGTCGTCCTCTCCGGCGTCAAGCCCTCGCAGTTCGCCGCCGCGCTCAAGGTCGACATGGTCGCCAGGGGCATTTCCGGGTTTTTGAAGGAGGGGAAGGTCAGGCGCGTCGTGGAGGTGTTGACCAAAGTTGACGAGCTTGGGGTTCGGCCGCTGGAGCTGTTTGATGGCTACCCTATGGAGTTGCTGGCAGGACATTGTCAGCGCCTTTTGAAATTCAAGCAAGTTCAGGAACTTGTTGAGCTTATGGAGGTTCTTTCAGGTTTGCATTTCCCAATCAAAGAACTGGTGGAGCCATCTGAAGTCATCAAAACATGTGTCGATAAACGAAGCCCGAAATTGGCCATAAGGTATGCTTGTATTTTTCCACATGCGCATATCTTATTCTGTAACATTATGAATGAGTTTGGAAAGAGGAGGGCATTGGCGTCTGCTTTGGCAGCATATGAAGCATCTAAGGAAAAATTGAGTGGTTCTAATATGTACATCTACCGCACAATAATTGACGTCTGTGGTGTCTGCAAAGACTACATGAAATCTAGGTACATTTATGAGGACTTGCTCAAACAGAAGGTCATTCCGAATATATATGTTTTCAACAGTCTGATGAATGTGAACTCACATGATCTGAGCTACACATTTCATGTATACAAGAGTATGCAGAATCTTGGTGTCAAAGCAGATATGTTACAATATTCTTTTGAGGCATGCTGTCTTGCTGGAAGAGTTGATCTGGCACAAGATATTTATAGGGAAGTACAGCATTTGGAATCGACAGGAGTGATGAAATTGGATGTCTTCACTTACAGCACTATTGTAAAGGTCTTTTCAGATGCAAAAATGTGGCACATGGCTTTAAATGTCAAAGAAGATATGCTAGCAGCAGGTGTTATGCCAAATACAATTACATGGTCATCATTGATCAGTGCCTGTGCAAATGCAGGTCTTGTGGATAAGGCAATTCAATTGTTTGAAGAGATGCTCTTGACCGGCTGTGAACCTAATTCACAGTGTTTTAACATCCTTCTGCATGCTTGTGTTGAGGCTTGCCAGTATGACAGGGCTTTTCGCCTTTTCCATTCTTTTAAGAGTAATAAGGTCCAGGAGACTTTTGGCAAAAACTACAAAGGGCTTTCTTTTAAACCCACAACTACAACTACAATACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

460

Amino Acids

51.54

Weight (kDa)

8.3

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	301 - 439	9.1e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	310 - 433	1.6e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	333 - 384	2.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	336 - 384	2.1e-09	PPR repeat family
PPR_3	PF13812	359 - 419	2.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	367 - 398	5.4e-10	PPR repeat
PPR_2	PF13041	370 - 418	2.1e-14	PPR repeat family
PPR	PF01535	373 - 402	4.9e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02830
fragaria_vesca	FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120 FvH4_6g15120
malus_domestica	MD12G1126500.v1.1
prunus_persica	Prupe.6G243100_v2.0.a1
pyrus_communis	pycom12g12460
rosa_chinensis	RchiOBHm_Chr3g0468421
rosa_laevigata	RLG00000024430
rosa_multiflora	Rmu_sc0014003.1_g000015 Rmu_sc0020046.1_g000004
rosa_roxburghii	Rroxscaffold_6G00412780
rosa_rugosa	Rorug03G0095300 Rorug03G0095400
rosa_samantha	Rh3AG143100 Rh3BG165500 Rh3DG165100
rosa_wichuraiana	Rw0G014180 Rw3G013520 Rw3G013550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1088
AatII	GACGTC	1 cut(s)	723
Acc16I	TGCGCA	1 cut(s)	588
Acc36I	ACCTGC	2 cut(s)	1088, 1145
AccBSI	CCGCTC	1 cut(s)	11
AccI	GTMKAC	2 cut(s)	267, 861
AccII	CGCG	3 cut(s)	177, 257, 321
AciI	CCGC	9 cut(s)	9, 95, 98, 115, 175, 252, 255, 365, 706
AcoI	YGGCCR	4 cut(s)	92, 112, 362, 555
AcsI	RAATTY	1 cut(s)	428
AcuI	CTGAAG	1 cut(s)	534
AcyI	GRCGYC	3 cut(s)	231, 641, 720
AfaI	GTAC	3 cut(s)	698, 758, 972
AfiI	CCNNNNNNNGG	2 cut(s)	117, 553
AflIII	ACRYGT	1 cut(s)	527
AgsI	TTSAA	6 cut(s)	301, 427, 433, 811, 1178, 1187
AjnI	CCWGG	2 cut(s)	278, 1314
AluBI	AGCT	7 cut(s)	45, 169, 187, 352, 373, 457, 846
AluI	AGCT	7 cut(s)	45, 169, 187, 352, 373, 457, 846
Alw26I	GTCTC	1 cut(s)	1313
AlwNI	CAGNNNCTG	1 cut(s)	1143
AoxI	GGCC	4 cut(s)	92, 112, 362, 555
ApeKI	GCWGC	2 cut(s)	653, 1094
ApoI	RAATTY	1 cut(s)	428
ArsI	GACNNNNNNTTYG	4 cut(s)	516, 548, 771, 803
AspLEI	GCGC	4 cut(s)	259, 321, 420, 589
AspS9I	GGNCC	2 cut(s)	121, 1312
AsuC2I	CCSGG	2 cut(s)	91, 292
AsuNHI	GCTAGC	1 cut(s)	1090
AvaII	GGWCC	2 cut(s)	121, 1312
BalI	TGGCCA	1 cut(s)	557
BbsI	GAAGAC	1 cut(s)	1003
BbvI	GCAGC	2 cut(s)	665, 1106
BccI	CCATC	2 cut(s)	374, 517
BceAI	ACGGC	1 cut(s)	196
BciT130I	CCWGG	2 cut(s)	280, 1316
BclI	TGATCA	1 cut(s)	1134
BcnI	CCSGG	2 cut(s)	91, 292
BcoDI	GTCTC	1 cut(s)	1313
BfaI	CTAG	2 cut(s)	753, 1091
BfoI	RGCGCY	1 cut(s)	421
BfuAI	ACCTGC	2 cut(s)	1088, 1145
BisI	GCNGC	8 cut(s)	95, 98, 115, 252, 255, 365, 654, 1095
BlsI	GCNGC	8 cut(s)	96, 99, 116, 253, 256, 366, 655, 1096
Bme1390I	CCNGG	4 cut(s)	91, 280, 292, 1316
Bme18I	GGWCC	2 cut(s)	121, 1312
BmgT120I	GGNCC	2 cut(s)	121, 1312
BmiI	GGNNCC	3 cut(s)	122, 123, 507
BmrFI	CCNGG	4 cut(s)	91, 280, 292, 1316
BmsI	GCATC	3 cut(s)	674, 1036, 1182
BmtI	GCTAGC	1 cut(s)	1094
BpiI	GAAGAC	1 cut(s)	1003
BpmI	CTGGAG	1 cut(s)	389
BpuEI	CTTGAG	1 cut(s)	245
BpuMI	CCSGG	2 cut(s)	91, 292
BsaHI	GRCGYC	3 cut(s)	231, 641, 720
BsaJI	CCNNGG	1 cut(s)	279
BsaXI	ACNNNNNCTCC	2 cut(s)	146, 176
Bsc4I	CCNNNNNNNGG	2 cut(s)	117, 553
Bse118I	RCCGGY	2 cut(s)	110, 1202
Bse1I	ACTGG	2 cut(s)	504, 1264
BseBI	CCWGG	2 cut(s)	280, 1316
BseDI	CCNNGG	1 cut(s)	279
BseGI	GGATG	2 cut(s)	1012, 1233
BseLI	CCNNNNNNNGG	2 cut(s)	117, 553
BseMII	CTCAG	1 cut(s)	833
BseNI	ACTGG	2 cut(s)	504, 1264
BseRI	GAGGAG	1 cut(s)	643
BseX3I	CGGCCG	3 cut(s)	92, 112, 362
BseXI	GCAGC	2 cut(s)	665, 1106
BseYI	CCCAGC	1 cut(s)	117
Bsh1236I	CGCG	3 cut(s)	177, 257, 321
Bsh1285I	CGRYCG	3 cut(s)	95, 115, 365
BshFI	GGCC	4 cut(s)	94, 114, 364, 557
BsiEI	CGRYCG	3 cut(s)	95, 115, 365
BsiSI	CCGG	5 cut(s)	91, 111, 228, 291, 1203
BslFI	GGGAC	1 cut(s)	134
BslI	CCNNNNNNNGG	2 cut(s)	117, 553
BsmAI	GTCTC	1 cut(s)	1313
BsmFI	GGGAC	1 cut(s)	134
BsnI	GGCC	4 cut(s)	94, 114, 364, 557
Bsp1407I	TGTACA	1 cut(s)	696
Bsp143I	GATC	4 cut(s)	204, 838, 943, 1134
BspACI	CCGC	9 cut(s)	9, 95, 98, 115, 175, 252, 255, 365, 706
BspANI	GGCC	4 cut(s)	94, 114, 364, 557
BspCNI	CTCAG	1 cut(s)	834
BspFNI	CGCG	3 cut(s)	177, 257, 321
BspLI	GGNNCC	3 cut(s)	122, 123, 507
BspMI	ACCTGC	2 cut(s)	1088, 1145
BspOI	GCTAGC	1 cut(s)	1094
BsrBI	CCGCTC	1 cut(s)	11
BsrFI	RCCGGY	2 cut(s)	110, 1202
BsrGI	TGTACA	1 cut(s)	696
BsrI	ACTGG	2 cut(s)	504, 1264
BssAI	RCCGGY	2 cut(s)	110, 1202
BssECI	CCNNGG	1 cut(s)	279
BssMI	GATC	4 cut(s)	204, 838, 943, 1134
BssNAI	GTATAC	1 cut(s)	862
BssNI	GRCGYC	3 cut(s)	231, 641, 720
Bst1107I	GTATAC	1 cut(s)	862
Bst2UI	CCWGG	2 cut(s)	280, 1316
Bst4CI	ACNGT	2 cut(s)	815, 1224
Bst6I	CTCTTC	3 cut(s)	110, 931, 1182
BstACI	GRCGYC	3 cut(s)	231, 641, 720
BstAUI	TGTACA	1 cut(s)	696
BstC8I	GCNNGC	9 cut(s)	112, 171, 175, 185, 402, 922, 1092, 1245, 1261
BstDEI	CTNAG	2 cut(s)	669, 842
BstF5I	GGATG	2 cut(s)	1012, 1233
BstFNI	CGCG	3 cut(s)	177, 257, 321
BstH2I	RGCGCY	1 cut(s)	421
BstHHI	GCGC	4 cut(s)	259, 321, 420, 589
BstKTI	GATC	4 cut(s)	207, 841, 946, 1137
BstMAI	GTCTC	1 cut(s)	1313
BstMBI	GATC	4 cut(s)	204, 838, 943, 1134
BstMCI	CGRYCG	3 cut(s)	95, 115, 365
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 206, 370, 653, 662
BstNI	CCWGG	2 cut(s)	280, 1316
BstNSI	RCATGY	4 cut(s)	531, 587, 924, 1247
BstSCI	CCNGG	4 cut(s)	89, 278, 290, 1314
BstUI	CGCG	3 cut(s)	177, 257, 321
BstV1I	GCAGC	2 cut(s)	665, 1106
BstV2I	GAAGAC	1 cut(s)	1003
BstZ17I	GTATAC	1 cut(s)	862
BstZI	CGGCCG	3 cut(s)	92, 112, 362
BsuRI	GGCC	4 cut(s)	94, 114, 364, 557
BtsCI	GGATG	2 cut(s)	1012, 1233
BtsIMutI	CAGTG	2 cut(s)	1144, 1229
BveI	ACCTGC	2 cut(s)	1088, 1145
Cac8I	GCNNGC	9 cut(s)	112, 171, 175, 185, 402, 922, 1092, 1245, 1261
CaiI	CAGNNNCTG	1 cut(s)	1143
CfoI	GCGC	4 cut(s)	259, 321, 420, 589
Cfr10I	RCCGGY	2 cut(s)	110, 1202
Cfr13I	GGNCC	2 cut(s)	121, 1312
CseI	GACGC	4 cut(s)	205, 220, 310, 630
Csp6I	GTAC	3 cut(s)	697, 757, 971
CviQI	GTAC	3 cut(s)	697, 757, 971
DdeI	CTNAG	2 cut(s)	669, 842
DpnI	GATC	4 cut(s)	206, 840, 945, 1136
DpnII	GATC	4 cut(s)	204, 838, 943, 1134
DraI	TTTAAA	2 cut(s)	1071, 1354
EaeI	YGGCCR	4 cut(s)	92, 112, 362, 555
EagI	CGGCCG	3 cut(s)	92, 112, 362
Eam1104I	CTCTTC	3 cut(s)	110, 931, 1182
EarI	CTCTTC	3 cut(s)	110, 931, 1182
EclXI	CGGCCG	3 cut(s)	92, 112, 362
Eco47I	GGWCC	2 cut(s)	121, 1312
Eco52I	CGGCCG	3 cut(s)	92, 112, 362
Eco57I	CTGAAG	1 cut(s)	534
EcoO109I	RGGNCCY	1 cut(s)	121
EcoRII	CCWGG	2 cut(s)	278, 1314
FalI	AAGNNNNNCTT	2 cut(s)	553, 585
FaqI	GGGAC	1 cut(s)	134
FauI	CCCGC	1 cut(s)	182
FauNDI	CATATG	1 cut(s)	658
FbaI	TGATCA	1 cut(s)	1134
FblI	GTMKAC	2 cut(s)	267, 861
Fnu4HI	GCNGC	8 cut(s)	95, 98, 115, 252, 255, 365, 654, 1095
FokI	GGATG	2 cut(s)	1019, 1220
Fsp4HI	GCNGC	8 cut(s)	95, 98, 115, 252, 255, 365, 654, 1095
FspAI	RTGCGCAY	1 cut(s)	588
FspBI	CTAG	2 cut(s)	753, 1091
FspI	TGCGCA	1 cut(s)	588
GlaI	GCGC	4 cut(s)	258, 320, 419, 588
GluI	GCNGC	8 cut(s)	95, 98, 115, 252, 255, 365, 654, 1095
GsaI	CCCAGC	1 cut(s)	121
GsuI	CTGGAG	1 cut(s)	389
HaeII	RGCGCY	1 cut(s)	421
HaeIII	GGCC	4 cut(s)	94, 114, 364, 557
HapII	CCGG	5 cut(s)	91, 111, 228, 291, 1203
HgaI	GACGC	4 cut(s)	205, 220, 310, 630
HhaI	GCGC	4 cut(s)	259, 321, 420, 589
Hin1I	GRCGYC	3 cut(s)	231, 641, 720
Hin6I	GCGC	4 cut(s)	257, 319, 418, 587
HinP1I	GCGC	4 cut(s)	257, 319, 418, 587
HincII	GTYRAC	3 cut(s)	268, 336, 346
HindII	GTYRAC	3 cut(s)	268, 336, 346
HinfI	GANTC	2 cut(s)	877, 983
HpaII	CCGG	5 cut(s)	91, 111, 228, 291, 1203
Hpy166II	GTNNAC	6 cut(s)	268, 336, 346, 829, 862, 1211
Hpy188I	TCNGA	5 cut(s)	514, 795, 819, 843, 1045
Hpy188III	TCNNGA	2 cut(s)	443, 1198
Hpy8I	GTNNAC	6 cut(s)	268, 336, 346, 829, 862, 1211
Hpy99I	CGWCG	4 cut(s)	182, 194, 221, 326
HpyAV	CCTTC	4 cut(s)	295, 304, 778, 1247
HpyCH4III	ACNGT	2 cut(s)	815, 1224
HpyCH4IV	ACGT	1 cut(s)	720
HpyCH4V	TGCA	7 cut(s)	481, 735, 874, 1049, 1148, 1154, 1243
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 206, 370, 653, 662
HpyF3I	CTNAG	2 cut(s)	669, 842
HpySE526I	ACGT	1 cut(s)	720
Hsp92I	GRCGYC	3 cut(s)	231, 641, 720
HspAI	GCGC	4 cut(s)	257, 319, 418, 587
KflI	GGGWCCC	1 cut(s)	121
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Ksp22I	TGATCA	1 cut(s)	1134
Kzo9I	GATC	4 cut(s)	204, 838, 943, 1134
LmnI	GCTCC	3 cut(s)	16, 370, 505
Lsp1109I	GCAGC	2 cut(s)	665, 1106
LweI	GCATC	3 cut(s)	674, 1036, 1182
MaeI	CTAG	2 cut(s)	753, 1091
MaeII	ACGT	1 cut(s)	720
MaeIII	GTNAC	2 cut(s)	602, 900
MalI	GATC	4 cut(s)	206, 840, 945, 1136
MbiI	CCGCTC	1 cut(s)	11
MboI	GATC	4 cut(s)	204, 838, 943, 1134
MboII	GAAGA	5 cut(s)	97, 948, 1003, 1094, 1199
MfeI	CAATTG	1 cut(s)	1178
MlsI	TGGCCA	1 cut(s)	557
MluCI	AATT	9 cut(s)	428, 551, 677, 714, 1001, 1116, 1173, 1178, 1216
MluNI	TGGCCA	1 cut(s)	557
Mox20I	TGGCCA	1 cut(s)	557
MroNI	GCCGGC	1 cut(s)	110
MscI	TGGCCA	1 cut(s)	557
MseI	TTAA	4 cut(s)	1070, 1230, 1299, 1353
MslI	CAYNNNNRTG	1 cut(s)	1248
Msp20I	TGGCCA	1 cut(s)	557
MspA1I	CMGCKG	2 cut(s)	117, 367
MspI	CCGG	5 cut(s)	91, 111, 228, 291, 1203
MspR9I	CCNGG	4 cut(s)	91, 280, 292, 1316
MunI	CAATTG	1 cut(s)	1178
MvaI	CCWGG	2 cut(s)	280, 1316
MvnI	CGCG	3 cut(s)	177, 257, 321
MwoI	GCNNNNNNNGC	5 cut(s)	158, 206, 370, 653, 662
NaeI	GCCGGC	1 cut(s)	112
NciI	CCSGG	2 cut(s)	91, 292
NdeI	CATATG	1 cut(s)	658
NdeII	GATC	4 cut(s)	204, 838, 943, 1134
NgoMIV	GCCGGC	1 cut(s)	110
NheI	GCTAGC	1 cut(s)	1090
NlaIV	GGNNCC	3 cut(s)	122, 123, 507
NmeAIII	GCCGAG	1 cut(s)	235
NsbI	TGCGCA	1 cut(s)	588
NspI	RCATGY	4 cut(s)	531, 587, 924, 1247
PaeI	GCATGC	2 cut(s)	924, 1247
PaqCI	CACCTGC	1 cut(s)	1088
PciI	ACATGT	1 cut(s)	527
PcsI	WCGNNNNNNNCGW	2 cut(s)	186, 213
PdiI	GCCGGC	1 cut(s)	112
PfeI	GAWTC	2 cut(s)	877, 983
PflFI	GACNNNGTC	2 cut(s)	272, 411
PfoI	TCCNGGA	1 cut(s)	1314
PkrI	GCNGC	8 cut(s)	96, 99, 116, 253, 256, 366, 655, 1096
PpuMI	RGGWCCY	1 cut(s)	121
PscI	ACATGT	1 cut(s)	527
Psp5II	RGGWCCY	1 cut(s)	121
Psp6I	CCWGG	2 cut(s)	278, 1314
PspFI	CCCAGC	1 cut(s)	117
PspGI	CCWGG	2 cut(s)	278, 1314
PspN4I	GGNNCC	3 cut(s)	122, 123, 507
PspPI	GGNCC	2 cut(s)	121, 1312
PspPPI	RGGWCCY	1 cut(s)	121
PstNI	CAGNNNCTG	1 cut(s)	1143
PsyI	GACNNNGTC	2 cut(s)	272, 411
RsaI	GTAC	3 cut(s)	698, 758, 972
RsaNI	GTAC	3 cut(s)	697, 757, 971
RseI	CAYNNNNRTG	1 cut(s)	1248
SalI	GTCGAC	1 cut(s)	266
SaqAI	TTAA	4 cut(s)	1070, 1230, 1299, 1353
SatI	GCNGC	8 cut(s)	95, 98, 115, 252, 255, 365, 654, 1095
Sau3AI	GATC	4 cut(s)	204, 838, 943, 1134
Sau96I	GGNCC	2 cut(s)	121, 1312
ScrFI	CCNGG	4 cut(s)	91, 280, 292, 1316
SfaNI	GCATC	3 cut(s)	674, 1036, 1182
SinI	GGWCC	2 cut(s)	121, 1312
SmiMI	CAYNNNNRTG	1 cut(s)	1248
SmlI	CTYRAG	1 cut(s)	260
SmoI	CTYRAG	1 cut(s)	260
SphI	GCATGC	2 cut(s)	924, 1247
Sse9I	AATT	9 cut(s)	428, 551, 677, 714, 1001, 1116, 1173, 1178, 1216
SsiI	CCGC	9 cut(s)	9, 95, 98, 115, 175, 252, 255, 365, 706
SspI	AATATT	1 cut(s)	908
SspMI	CTAG	2 cut(s)	753, 1091
StyD4I	CCNGG	4 cut(s)	89, 278, 290, 1314
TaaI	ACNGT	2 cut(s)	815, 1224
TaiI	ACGT	1 cut(s)	723
TaqI	TCGA	4 cut(s)	189, 267, 534, 986
TasI	AATT	9 cut(s)	428, 551, 677, 714, 1001, 1116, 1173, 1178, 1216
TatI	WGTACW	2 cut(s)	696, 970
TauI	GCSGC	6 cut(s)	97, 100, 117, 254, 257, 367
TfiI	GAWTC	2 cut(s)	877, 983
Tru1I	TTAA	4 cut(s)	1070, 1230, 1299, 1353
Tru9I	TTAA	4 cut(s)	1070, 1230, 1299, 1353
TscAI	CASTG	2 cut(s)	1144, 1229
TseI	GCWGC	2 cut(s)	653, 1094
TspDTI	ATGAA	6 cut(s)	626, 675, 761, 836, 845, 1013
TspRI	CASTG	2 cut(s)	1144, 1229
Tth111I	GACNNNGTC	2 cut(s)	272, 411
VpaK11BI	GGWCC	2 cut(s)	121, 1312
XapI	RAATTY	1 cut(s)	428
XceI	RCATGY	4 cut(s)	531, 587, 924, 1247
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1322
XmiI	GTMKAC	2 cut(s)	267, 861
XspI	CTAG	2 cut(s)	753, 1091
ZraI	GACGTC	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.