Rh3DG165100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0009425
Physical Location & Seq
Reverse (-)
14344408 .. 14349754
5347 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG165100.1

Sequence Viewer

Length: 1758 bp
ATGAGAGTGTTGGTCATCCTTGGCTACACTAGCTCTTCAATTTCCACTCCCCCAAATCCCAATGGTAACCGCTCCACCAAACCCTACAAGCCCCCAATCCCCAAGCTCTCCCCCTCCAAATCCTCCCCTCCAATCTCCACCCTCCATTCCCGGCCGCCGCCTCTCTTCGCCGGCCGCTGGGACCCCCACAACACCCACCTCTCCTACTTCGCCGACCTCGCCTCCAAGCTCGCCCGCGACGGCAAGCTCGACGACTTCGCCATGATCGCCGAGAGCGTCGTCCTCTCCGGCGTCAAGCCCTCGCAGTTCGCCGCCGCGCTCAAGGTCGACATGGTCGCCAGGGGCATTTCCGGGTTTTTGAAGGAGGGGAAGGTCAGGCGCGTCCTGGAGGTGTTGACCAAAGTTGACGAGCTTGGGGTTCGGCCGCTGGAGCTGTTTGATGGTTACGCTATGGAGTTGCTGGGAGGACATTGTCACCGCCTTTTGAAATTCAAGCGAGTTCAGGAACTTGTTGAGCTTATGGAGGTTCTTTCAGGTTTGCATTTCCCAATCAAAGAACTGGTGGAGCCATCTGAAGTCATCAAAACATGTGTCGATAAACGTAGCCCGAAATTGGCCATAAGGTATGCTTGTATTTTTCCACATGCGCATATCTTATTCTGTAACATTATGAATGAGTTTGGAAAGAGGAGGGCATTGGCGTCTGCTTTGACAGCATATGAAGCATCTAAGGAAAAATTGAGTGGTTCTAATATGTACATCTACCGCACAATAATTGACGTCTGTGGTGTCTGCAAAGACTACATGAAATCTAGGTACATTTATGAGGACTTGCTCAAACAGAAGGTCATTCCGAATATATATGTTTTCAACAGTCTGATGAATGTGAACTCACATGATCTGAGCTACACATTTCATGTATACAAGAGTATGCAGAATCTTGGTGTCAAAGCAGATTTGGCATGTTACAATATTCTTTTGAAGGCATGCTGTCTCGCTGGAAGAGTTGATCTGGCACAAGATATTTATAGGGAAGTACAGCATTTGGAATCGACAGGAGTGTTGAAATTGGATGTCTTCACTTACAGCACTATTGTAAAGGTCTTTTCAGATGCAAAAATGTGGCACATGGCTTTAAATGTCAAAGAAGATATGCTAGCAGCAGGGGTTATGCCAAATACAATTACATGGTCATCATTGATCAGTGCCTGTGCAAATGCAGGTCTTGTGGATAAGGCAATTCAATTGTTTGAAGAGATGCTCTTGGTCGGCTGTGAACCTAATTCACAGTGCTTTAACATCCTTCTGCATGCTTGTGTTGAGGCTTGCCAGTATGACAGGGCTTTTCGCCTTTTCCATTCTTTTAAGAGTAATAAGGTCCAGGAGACTTTTGGCAAAAACTACAAAGGGCTTTCTTTTAAACCCACAACTACAACATACAATACTTTGATGAAGGCCTGTGGGTCTGACTACTACCATGCAAGAGCACTGATGGATGAGATGAAAACAGTAGGTCTTTTTCCTAATCAAATAACATGGTCGATTTTGGCTGATATATGTGGAAGCTCGGGGAATGTTGAGGGTGCCTTGCAGATCTTGAAAAGTATGCGTGTAGCTGGGATCCAACCTGATGTTGTTGCCTATACAACAGCCATCAAGATCTGCGTGGAAAGTGAAAATTTGGACTTAGCATTGTCGCTGTTTGCAGAAATGAAAAAATATCAGATACACCCAAATTTGGTAAGTGCTACGAATTGA

Protein Analysis

585

Amino Acids

65.27

Weight (kDa)

8.77

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 225 - 354 6.4e-08 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 298 - 458 1.2e-13 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 322 - 455 7.1e-08 Fungal tetratrico peptide repeats
PPR_3 PF13812 355 - 406 2.7e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 358 - 406 3e-09 PPR repeat family
PPR_3 PF13812 381 - 441 1.5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 389 - 420 7.2e-10 PPR repeat
PPR_2 PF13041 392 - 440 6e-14 PPR repeat family
PPR PF01535 395 - 425 4.4e-08 PPR repeat
PPR_long PF17177 482 - 580 1.3e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 532 - 581 6e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 543 - 582 3.4e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 783
Acc16I TGCGCA 1 cut(s) 648
Acc36I ACCTGC 1 cut(s) 1211
AccB1I GGYRCC 1 cut(s) 1583
AccBSI CCGCTC 1 cut(s) 72
AccI GTMKAC 2 cut(s) 327, 921
AccII CGCG 3 cut(s) 237, 317, 381
AclWI GGATC 2 cut(s) 1615, 1628
AcoI YGGCCR 4 cut(s) 152, 172, 422, 615
AcsI RAATTY 3 cut(s) 488, 1678, 1735
AcuI CTGAAG 1 cut(s) 594
AcyI GRCGYC 3 cut(s) 291, 701, 780
AfaI GTAC 3 cut(s) 758, 818, 1038
AfiI CCNNNNNNNGG 3 cut(s) 177, 613, 1738
AflIII ACRYGT 1 cut(s) 587
AjnI CCWGG 3 cut(s) 338, 384, 1380
Alw21I GWGCWC 1 cut(s) 1489
Alw26I GTCTC 2 cut(s) 998, 1379
AlwI GGATC 2 cut(s) 1615, 1628
AlwNI CAGNNNCTG 1 cut(s) 1209
Ama87I CYCGRG 1 cut(s) 1567
AoxI GGCC 5 cut(s) 152, 172, 422, 615, 1455
ApeKI GCWGC 1 cut(s) 1160
ApoI RAATTY 3 cut(s) 488, 1678, 1735
ArsI GACNNNNNNTTYG 4 cut(s) 576, 608, 831, 863
AspLEI GCGC 3 cut(s) 319, 381, 649
AspS9I GGNCC 2 cut(s) 181, 1378
AsuC2I CCSGG 2 cut(s) 151, 352
AsuHPI GGTGA 1 cut(s) 467
AsuNHI GCTAGC 1 cut(s) 1156
AvaI CYCGRG 1 cut(s) 1567
AvaII GGWCC 2 cut(s) 181, 1378
BalI TGGCCA 1 cut(s) 617
BamHI GGATCC 1 cut(s) 1620
BanI GGYRCC 1 cut(s) 1583
BbsI GAAGAC 1 cut(s) 1069
Bbv12I GWGCWC 1 cut(s) 1489
BbvI GCAGC 1 cut(s) 1172
BccI CCATC 4 cut(s) 434, 577, 1486, 1661
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 3 cut(s) 340, 386, 1382
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 151, 352
BcoDI GTCTC 2 cut(s) 998, 1379
BfaI CTAG 3 cut(s) 30, 813, 1157
BfuAI ACCTGC 1 cut(s) 1211
BglII AGATCT 2 cut(s) 1593, 1659
BisI GCNGC 7 cut(s) 155, 158, 175, 312, 315, 425, 1161
BlsI GCNGC 7 cut(s) 156, 159, 176, 313, 316, 426, 1162
Bme1390I CCNGG 5 cut(s) 151, 340, 352, 386, 1382
Bme18I GGWCC 2 cut(s) 181, 1378
BmeT110I CYCGRG 1 cut(s) 1567
BmgT120I GGNCC 2 cut(s) 181, 1378
BmiI GGNNCC 5 cut(s) 182, 183, 567, 1585, 1622
BmrFI CCNGG 5 cut(s) 151, 340, 352, 386, 1382
BmsI GCATC 3 cut(s) 734, 1102, 1248
BmtI GCTAGC 1 cut(s) 1160
BpiI GAAGAC 1 cut(s) 1069
BpmI CTGGAG 2 cut(s) 407, 449
BpuEI CTTGAG 1 cut(s) 305
BpuMI CCSGG 2 cut(s) 151, 352
BsaHI GRCGYC 3 cut(s) 291, 701, 780
BsaJI CCNNGG 2 cut(s) 19, 339
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 3 cut(s) 177, 613, 1738
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 2 cut(s) 564, 1330
BseBI CCWGG 3 cut(s) 340, 386, 1382
BseDI CCNNGG 2 cut(s) 19, 339
BseGI GGATG 4 cut(s) 15, 1078, 1299, 1501
BseLI CCNNNNNNNGG 3 cut(s) 177, 613, 1738
BseMII CTCAG 1 cut(s) 893
BseNI ACTGG 2 cut(s) 564, 1330
BseRI GAGGAG 1 cut(s) 703
BseX3I CGGCCG 3 cut(s) 152, 172, 422
BseXI GCAGC 1 cut(s) 1172
BseYI CCCAGC 3 cut(s) 177, 460, 1616
Bsh1236I CGCG 3 cut(s) 237, 317, 381
Bsh1285I CGRYCG 3 cut(s) 155, 175, 425
BshFI GGCC 5 cut(s) 154, 174, 424, 617, 1457
BshNI GGYRCC 1 cut(s) 1583
BsiEI CGRYCG 3 cut(s) 155, 175, 425
BsiHKAI GWGCWC 1 cut(s) 1489
BsiHKCI CYCGRG 1 cut(s) 1567
BsiSI CCGG 4 cut(s) 151, 171, 288, 351
BslFI GGGAC 1 cut(s) 194
BslI CCNNNNNNNGG 3 cut(s) 177, 613, 1738
BsmAI GTCTC 2 cut(s) 998, 1379
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 5 cut(s) 154, 174, 424, 617, 1457
BsoBI CYCGRG 1 cut(s) 1567
Bsp1286I GDGCHC 1 cut(s) 1489
Bsp1407I TGTACA 1 cut(s) 756
Bsp143I GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
BspANI GGCC 5 cut(s) 154, 174, 424, 617, 1457
BspCNI CTCAG 1 cut(s) 894
BspFNI CGCG 3 cut(s) 237, 317, 381
BspLI GGNNCC 5 cut(s) 182, 183, 567, 1585, 1622
BspMI ACCTGC 1 cut(s) 1211
BspOI GCTAGC 1 cut(s) 1160
BspPI GGATC 2 cut(s) 1615, 1628
BspQI GCTCTTC 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 1583
BsrBI CCGCTC 1 cut(s) 72
BsrFI RCCGGY 1 cut(s) 170
BsrGI TGTACA 1 cut(s) 756
BsrI ACTGG 2 cut(s) 564, 1330
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 2 cut(s) 19, 339
BssMI GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
BssNAI GTATAC 1 cut(s) 922
BssNI GRCGYC 3 cut(s) 291, 701, 780
BssT1I CCWWGG 1 cut(s) 19
Bst1107I GTATAC 1 cut(s) 922
Bst2UI CCWGG 3 cut(s) 340, 386, 1382
Bst4CI ACNGT 3 cut(s) 875, 1290, 1510
Bst6I CTCTTC 4 cut(s) 40, 170, 997, 1248
BstACI GRCGYC 3 cut(s) 291, 701, 780
BstAUI TGTACA 1 cut(s) 756
BstC8I GCNNGC 8 cut(s) 172, 231, 235, 245, 988, 1158, 1311, 1327
BstDEI CTNAG 3 cut(s) 729, 902, 1687
BstEII GGTNACC 1 cut(s) 65
BstF5I GGATG 4 cut(s) 15, 1078, 1299, 1501
BstFNI CGCG 3 cut(s) 237, 317, 381
BstHHI GCGC 3 cut(s) 319, 381, 649
BstKTI GATC 7 cut(s) 267, 901, 1012, 1203, 1596, 1623, 1662
BstMAI GTCTC 2 cut(s) 998, 1379
BstMBI GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
BstMCI CGRYCG 3 cut(s) 155, 175, 425
BstMWI GCNNNNNNNGC 7 cut(s) 30, 218, 266, 430, 713, 722, 959
BstNI CCWGG 3 cut(s) 340, 386, 1382
BstNSI RCATGY 5 cut(s) 591, 647, 966, 990, 1313
BstPI GGTNACC 1 cut(s) 65
BstSCI CCNGG 5 cut(s) 149, 338, 350, 384, 1380
BstUI CGCG 3 cut(s) 237, 317, 381
BstV1I GCAGC 1 cut(s) 1172
BstV2I GAAGAC 1 cut(s) 1069
BstX2I RGATCY 3 cut(s) 1593, 1620, 1659
BstYI RGATCY 3 cut(s) 1593, 1620, 1659
BstZ17I GTATAC 1 cut(s) 922
BstZI CGGCCG 3 cut(s) 152, 172, 422
BsuRI GGCC 5 cut(s) 154, 174, 424, 617, 1457
BtsCI GGATG 4 cut(s) 15, 1078, 1299, 1501
BtsIMutI CAGTG 3 cut(s) 1210, 1295, 1487
BveI ACCTGC 1 cut(s) 1211
Cac8I GCNNGC 8 cut(s) 172, 231, 235, 245, 988, 1158, 1311, 1327
CaiI CAGNNNCTG 1 cut(s) 1209
CfoI GCGC 3 cut(s) 319, 381, 649
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 2 cut(s) 181, 1378
CseI GACGC 4 cut(s) 265, 280, 370, 690
Csp6I GTAC 3 cut(s) 757, 817, 1037
CviQI GTAC 3 cut(s) 757, 817, 1037
DdeI CTNAG 3 cut(s) 729, 902, 1687
DpnI GATC 7 cut(s) 266, 900, 1011, 1202, 1595, 1622, 1661
DpnII GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
DraI TTTAAA 2 cut(s) 1137, 1420
EaeI YGGCCR 4 cut(s) 152, 172, 422, 615
EagI CGGCCG 3 cut(s) 152, 172, 422
Eam1104I CTCTTC 4 cut(s) 40, 170, 997, 1248
EarI CTCTTC 4 cut(s) 40, 170, 997, 1248
EclXI CGGCCG 3 cut(s) 152, 172, 422
Eco130I CCWWGG 1 cut(s) 19
Eco147I AGGCCT 1 cut(s) 1457
Eco47I GGWCC 2 cut(s) 181, 1378
Eco52I CGGCCG 3 cut(s) 152, 172, 422
Eco57I CTGAAG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 1567
Eco91I GGTNACC 1 cut(s) 65
EcoO109I RGGNCCY 1 cut(s) 181
EcoO65I GGTNACC 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 338, 384, 1380
EcoT14I CCWWGG 1 cut(s) 19
ErhI CCWWGG 1 cut(s) 19
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 1 cut(s) 194
FauI CCCGC 1 cut(s) 242
FauNDI CATATG 1 cut(s) 718
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 2 cut(s) 327, 921
Fnu4HI GCNGC 7 cut(s) 155, 158, 175, 312, 315, 425, 1161
FokI GGATG 4 cut(s) 2, 1085, 1286, 1508
Fsp4HI GCNGC 7 cut(s) 155, 158, 175, 312, 315, 425, 1161
FspAI RTGCGCAY 1 cut(s) 648
FspBI CTAG 3 cut(s) 30, 813, 1157
FspI TGCGCA 1 cut(s) 648
GlaI GCGC 3 cut(s) 318, 380, 648
GluI GCNGC 7 cut(s) 155, 158, 175, 312, 315, 425, 1161
GsaI CCCAGC 3 cut(s) 181, 464, 1620
GsuI CTGGAG 2 cut(s) 407, 449
HaeIII GGCC 5 cut(s) 154, 174, 424, 617, 1457
HapII CCGG 4 cut(s) 151, 171, 288, 351
HgaI GACGC 4 cut(s) 265, 280, 370, 690
HhaI GCGC 3 cut(s) 319, 381, 649
Hin1I GRCGYC 3 cut(s) 291, 701, 780
Hin6I GCGC 3 cut(s) 317, 379, 647
HinP1I GCGC 3 cut(s) 317, 379, 647
HincII GTYRAC 3 cut(s) 328, 396, 406
HindII GTYRAC 3 cut(s) 328, 396, 406
HinfI GANTC 2 cut(s) 937, 1049
HpaII CCGG 4 cut(s) 151, 171, 288, 351
HphI GGTGA 1 cut(s) 467
Hpy166II GTNNAC 6 cut(s) 328, 396, 406, 889, 922, 1277
Hpy188I TCNGA 7 cut(s) 574, 855, 879, 903, 1111, 1468, 1725
Hpy188III TCNNGA 3 cut(s) 503, 1597, 1657
Hpy8I GTNNAC 6 cut(s) 328, 396, 406, 889, 922, 1277
Hpy99I CGWCG 3 cut(s) 242, 254, 281
HpyAV CCTTC 6 cut(s) 355, 364, 838, 976, 1313, 1447
HpyCH4III ACNGT 3 cut(s) 875, 1290, 1510
HpyCH4IV ACGT 2 cut(s) 601, 780
HpyF10VI GCNNNNNNNGC 7 cut(s) 30, 218, 266, 430, 713, 722, 959
HpyF3I CTNAG 3 cut(s) 729, 902, 1687
HpySE526I ACGT 2 cut(s) 601, 780
Hsp92I GRCGYC 3 cut(s) 291, 701, 780
HspAI GCGC 3 cut(s) 317, 379, 647
KflI GGGWCCC 1 cut(s) 181
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 1200
Kzo9I GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
LguI GCTCTTC 1 cut(s) 40
LmnI GCTCC 3 cut(s) 77, 430, 565
Lsp1109I GCAGC 1 cut(s) 1172
LweI GCATC 3 cut(s) 734, 1102, 1248
MaeI CTAG 3 cut(s) 30, 813, 1157
MaeII ACGT 2 cut(s) 601, 780
MaeIII GTNAC 5 cut(s) 65, 443, 473, 662, 965
MalI GATC 7 cut(s) 266, 900, 1011, 1202, 1595, 1622, 1661
MbiI CCGCTC 1 cut(s) 72
MboI GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
MboII GAAGA 6 cut(s) 27, 157, 1014, 1069, 1160, 1265
MfeI CAATTG 1 cut(s) 1244
MflI RGATCY 3 cut(s) 1593, 1620, 1659
MhlI GDGCHC 1 cut(s) 1489
MlsI TGGCCA 1 cut(s) 617
MluNI TGGCCA 1 cut(s) 617
MmeI TCCRAC 1 cut(s) 1648
Mox20I TGGCCA 1 cut(s) 617
MroNI GCCGGC 1 cut(s) 170
MscI TGGCCA 1 cut(s) 617
MseI TTAA 4 cut(s) 1136, 1296, 1365, 1419
MslI CAYNNNNRTG 1 cut(s) 1314
Msp20I TGGCCA 1 cut(s) 617
MspA1I CMGCKG 2 cut(s) 177, 427
MspI CCGG 4 cut(s) 151, 171, 288, 351
MspR9I CCNGG 5 cut(s) 151, 340, 352, 386, 1382
MunI CAATTG 1 cut(s) 1244
MvaI CCWGG 3 cut(s) 340, 386, 1382
MvnI CGCG 3 cut(s) 237, 317, 381
MwoI GCNNNNNNNGC 7 cut(s) 30, 218, 266, 430, 713, 722, 959
NaeI GCCGGC 1 cut(s) 172
NciI CCSGG 2 cut(s) 151, 352
NdeI CATATG 1 cut(s) 718
NdeII GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
NgoMIV GCCGGC 1 cut(s) 170
NheI GCTAGC 1 cut(s) 1156
NlaIV GGNNCC 5 cut(s) 182, 183, 567, 1585, 1622
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 1 cut(s) 473
NsbI TGCGCA 1 cut(s) 648
NspI RCATGY 5 cut(s) 591, 647, 966, 990, 1313
PaeI GCATGC 2 cut(s) 990, 1313
PceI AGGCCT 1 cut(s) 1457
PciI ACATGT 1 cut(s) 587
PciSI GCTCTTC 1 cut(s) 40
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 273
PdiI GCCGGC 1 cut(s) 172
PfeI GAWTC 2 cut(s) 937, 1049
PflFI GACNNNGTC 2 cut(s) 332, 471
PfoI TCCNGGA 2 cut(s) 384, 1380
PkrI GCNGC 7 cut(s) 156, 159, 176, 313, 316, 426, 1162
PpuMI RGGWCCY 1 cut(s) 181
PscI ACATGT 1 cut(s) 587
Psp5II RGGWCCY 1 cut(s) 181
Psp6I CCWGG 3 cut(s) 338, 384, 1380
PspEI GGTNACC 1 cut(s) 65
PspFI CCCAGC 3 cut(s) 177, 460, 1616
PspGI CCWGG 3 cut(s) 338, 384, 1380
PspN4I GGNNCC 5 cut(s) 182, 183, 567, 1585, 1622
PspPI GGNCC 2 cut(s) 181, 1378
PspPPI RGGWCCY 1 cut(s) 181
PstNI CAGNNNCTG 1 cut(s) 1209
PsuI RGATCY 3 cut(s) 1593, 1620, 1659
PsyI GACNNNGTC 2 cut(s) 332, 471
RsaI GTAC 3 cut(s) 758, 818, 1038
RsaNI GTAC 3 cut(s) 757, 817, 1037
RseI CAYNNNNRTG 1 cut(s) 1314
SalI GTCGAC 1 cut(s) 326
SapI GCTCTTC 1 cut(s) 40
SaqAI TTAA 4 cut(s) 1136, 1296, 1365, 1419
SatI GCNGC 7 cut(s) 155, 158, 175, 312, 315, 425, 1161
Sau3AI GATC 7 cut(s) 264, 898, 1009, 1200, 1593, 1620, 1659
Sau96I GGNCC 2 cut(s) 181, 1378
ScrFI CCNGG 5 cut(s) 151, 340, 352, 386, 1382
SduI GDGCHC 1 cut(s) 1489
SfaNI GCATC 3 cut(s) 734, 1102, 1248
SinI GGWCC 2 cut(s) 181, 1378
SmiMI CAYNNNNRTG 1 cut(s) 1314
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
SphI GCATGC 2 cut(s) 990, 1313
SseBI AGGCCT 1 cut(s) 1457
SspI AATATT 1 cut(s) 973
SspMI CTAG 3 cut(s) 30, 813, 1157
StuI AGGCCT 1 cut(s) 1457
StyD4I CCNGG 5 cut(s) 149, 338, 350, 384, 1380
StyI CCWWGG 1 cut(s) 19
TaaI ACNGT 3 cut(s) 875, 1290, 1510
TaiI ACGT 2 cut(s) 604, 783
TaqI TCGA 5 cut(s) 249, 327, 594, 1052, 1541
TatI WGTACW 2 cut(s) 756, 1036
TauI GCSGC 6 cut(s) 157, 160, 177, 314, 317, 427
TfiI GAWTC 2 cut(s) 937, 1049
Tru1I TTAA 4 cut(s) 1136, 1296, 1365, 1419
Tru9I TTAA 4 cut(s) 1136, 1296, 1365, 1419
TscAI CASTG 3 cut(s) 1210, 1295, 1494
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 1 cut(s) 1160
Tsp45I GTSAC 1 cut(s) 473
TspDTI ATGAA 8 cut(s) 686, 735, 821, 896, 905, 1466, 1517, 1727
TspRI CASTG 3 cut(s) 1210, 1295, 1494
Tth111I GACNNNGTC 2 cut(s) 332, 471
VpaK11BI GGWCC 2 cut(s) 181, 1378
XapI RAATTY 3 cut(s) 488, 1678, 1735
XceI RCATGY 5 cut(s) 591, 647, 966, 990, 1313
XcmI CCANNNNNNNNNTGG 1 cut(s) 1388
XmiI GTMKAC 2 cut(s) 327, 921
XspI CTAG 3 cut(s) 30, 813, 1157
ZraI GACGTC 1 cut(s) 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.