AT5G03345

membrane magnesium

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
814004 .. 815659
1656 bp
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UTR
Exon/CDS
Intron
AT5G03345.2

Sequence Viewer

Length: 315 bp
ATGAATTTGGGGTTCTTAGTTGGAGTTTTCGGCGTTCTTATTCTTTCTCATGCCGCTTATTCAACAATCCAATATAGAGGATTGTTGAAGATTATGGAGGAAGAGTTTTCTCGACCACCGATTAATGTTATTCTGGAGTTGATCATTGGACTAGCTCTGTGTATGTGGGCTGCTTTGACTTTCCCTGGTAAATTTCTCTCGATCCATCCGGATTCTGATGAAAACAGGGCGGTGTTTTTACCAGATAATTCGGATTTCATGATATTCAATCACCGTGGCAGACTGTTCCCACCGCAGATCGACATGAAGTTTTGA

Protein Analysis

104

Amino Acids

11.83

Weight (kDa)

5.82

Isoelectric Point (pI)

30.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03345 AT5G03345
fragaria_vesca FvH4_6g16280
malus_domestica MD04G1094200.v1.1 MD12G1113800.v1.1
prunus_persica Prupe.6G232700_v2.0.a1
pyrus_communis pycom04g08920 pycom12g11270
rosa_chinensis RchiOBHm_Chr3g0470141
rosa_laevigata RLG00000024293
rosa_multiflora Rmu_sc0005600.1_g000014
rosa_roxburghii Rroxscaffold_6G00411130
rosa_rugosa Rorug03G0107400
rosa_samantha Rh3DG194500
rosa_wichuraiana Rw3G014730 Rw3G014820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 208
AciI CCGC 3 cut(s) 54, 230, 293
AclWI GGATC 1 cut(s) 196
AcsI RAATTY 2 cut(s) 4, 191
AgsI TTSAA 3 cut(s) 63, 88, 268
AjnI CCWGG 1 cut(s) 184
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
AlwI GGATC 1 cut(s) 196
Aor13HI TCCGGA 1 cut(s) 208
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 2 cut(s) 4, 191
AseI ATTAAT 1 cut(s) 123
AsuHPI GGTGA 1 cut(s) 263
BbvI GCAGC 1 cut(s) 157
BccI CCATC 1 cut(s) 213
BciT130I CCWGG 1 cut(s) 186
BclI TGATCA 1 cut(s) 141
BfaI CTAG 1 cut(s) 152
BisI GCNGC 2 cut(s) 54, 171
BlsI GCNGC 2 cut(s) 55, 172
Bme1390I CCNGG 1 cut(s) 186
BmrFI CCNGG 1 cut(s) 186
BpmI CTGGAG 1 cut(s) 155
BsaJI CCNNGG 2 cut(s) 184, 274
BsaWI WCCGGW 1 cut(s) 208
BsaXI ACNNNNNCTCC 2 cut(s) 89, 119
BseAI TCCGGA 1 cut(s) 208
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 2 cut(s) 184, 274
BseGI GGATG 1 cut(s) 205
BseXI GCAGC 1 cut(s) 157
BsiSI CCGG 1 cut(s) 209
Bsp13I TCCGGA 1 cut(s) 208
Bsp143I GATC 3 cut(s) 141, 201, 297
BspACI CCGC 3 cut(s) 54, 230, 293
BspEI TCCGGA 1 cut(s) 208
BspHI TCATGA 1 cut(s) 258
BspPI GGATC 1 cut(s) 196
BssECI CCNNGG 2 cut(s) 184, 274
BssMI GATC 3 cut(s) 141, 201, 297
Bst2UI CCWGG 1 cut(s) 186
Bst4CI ACNGT 2 cut(s) 275, 285
Bst6I CTCTTC 1 cut(s) 96
BstDEI CTNAG 1 cut(s) 16
BstDSI CCRYGG 1 cut(s) 274
BstF5I GGATG 1 cut(s) 205
BstKTI GATC 3 cut(s) 144, 204, 300
BstMBI GATC 3 cut(s) 141, 201, 297
BstNI CCWGG 1 cut(s) 186
BstSCI CCNGG 1 cut(s) 184
BstV1I GCAGC 1 cut(s) 157
BtgI CCRYGG 1 cut(s) 274
BtsCI GGATG 1 cut(s) 205
CciI TCATGA 1 cut(s) 258
CspCI CAANNNNNGTGG 2 cut(s) 256, 291
CviAII CATG 3 cut(s) 50, 259, 304
CviJI RGCY 2 cut(s) 155, 170
CviKI_1 RGCY 2 cut(s) 155, 170
DdeI CTNAG 1 cut(s) 16
DpnI GATC 3 cut(s) 143, 203, 299
DpnII GATC 3 cut(s) 141, 201, 297
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
EcoRII CCWGG 1 cut(s) 184
FaeI CATG 3 cut(s) 53, 262, 307
FaiI YATR 6 cut(s) 51, 75, 95, 164, 260, 305
FatI CATG 3 cut(s) 49, 258, 303
FbaI TGATCA 1 cut(s) 141
Fnu4HI GCNGC 2 cut(s) 54, 171
FokI GGATG 1 cut(s) 192
Fsp4HI GCNGC 2 cut(s) 54, 171
FspBI CTAG 1 cut(s) 152
GluI GCNGC 2 cut(s) 54, 171
GsuI CTGGAG 1 cut(s) 155
HapII CCGG 1 cut(s) 209
Hin1II CATG 3 cut(s) 53, 262, 307
HinfI GANTC 1 cut(s) 212
HpaII CCGG 1 cut(s) 209
HphI GGTGA 1 cut(s) 263
Hpy188I TCNGA 2 cut(s) 217, 253
Hpy188III TCNNGA 5 cut(s) 111, 134, 199, 209, 259
HpyCH4III ACNGT 2 cut(s) 275, 285
HpyF3I CTNAG 1 cut(s) 16
Hsp92II CATG 3 cut(s) 53, 262, 307
Kpn2I TCCGGA 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 141
Kzo9I GATC 3 cut(s) 141, 201, 297
LpnPI CCDG 6 cut(s) 119, 171, 198, 211, 222, 255
Lsp1109I GCAGC 1 cut(s) 157
MaeI CTAG 1 cut(s) 152
MalI GATC 3 cut(s) 143, 203, 299
MboI GATC 3 cut(s) 141, 201, 297
MboII GAAGA 2 cut(s) 100, 113
MluCI AATT 3 cut(s) 4, 191, 247
MnlI CCTC 2 cut(s) 71, 91
MroI TCCGGA 1 cut(s) 208
MseI TTAA 1 cut(s) 123
MspI CCGG 1 cut(s) 209
MspR9I CCNGG 1 cut(s) 186
MvaI CCWGG 1 cut(s) 186
NdeII GATC 3 cut(s) 141, 201, 297
NlaIII CATG 3 cut(s) 53, 262, 307
PagI TCATGA 1 cut(s) 258
PfeI GAWTC 1 cut(s) 212
PkrI GCNGC 2 cut(s) 55, 172
PshBI ATTAAT 1 cut(s) 123
Psp6I CCWGG 1 cut(s) 184
PspGI CCWGG 1 cut(s) 184
SaqAI TTAA 1 cut(s) 123
SatI GCNGC 2 cut(s) 54, 171
Sau3AI GATC 3 cut(s) 141, 201, 297
ScrFI CCNGG 1 cut(s) 186
SetI ASST 1 cut(s) 157
Sse9I AATT 3 cut(s) 4, 191, 247
SsiI CCGC 3 cut(s) 54, 230, 293
SspMI CTAG 1 cut(s) 152
StyD4I CCNGG 1 cut(s) 184
TaaI ACNGT 2 cut(s) 275, 285
TaqI TCGA 3 cut(s) 112, 200, 300
TasI AATT 3 cut(s) 4, 191, 247
TauI GCSGC 1 cut(s) 56
TfiI GAWTC 1 cut(s) 212
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TseI GCWGC 1 cut(s) 170
TspDTI ATGAA 3 cut(s) 17, 234, 247
VspI ATTAAT 1 cut(s) 123
XapI RAATTY 2 cut(s) 4, 191
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.