Prupe.6G232700_v2.0.a1

membrane magnesium

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
23498361 .. 23500801
2441 bp
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UTR
Exon/CDS
Intron
Prupe.6G232700.1

Sequence Viewer

Length: 327 bp
ATGGCTTTGAATTTGGGATTCGTGGTTGGCATCCTTGGAGTTGTAATTCTCTCCCATGCCGCTTATTCAACCGTTCAATACAGGGGATTGTTGAAGATTATGGAGGAAGAGTTTTCAGGACCTCCATTGAATGTGGTTGTTGAATTGCTTCTAGGGTTAGTGTTATGTATGTGGGCAGCTCTTACTGTCCCCGGCACGTTTCTTTCAATACATCCCCATTCTGAAGAGAATAGGATTGTTTCTCTACCAGCCAACCTTGACTTTATGATCTTCAACCATCGTGCCAGAGTGTTCCCCGTGGAGATGGATTTGAACTTGAAACATTGA

Protein Analysis

109

Amino Acids

12.0

Weight (kDa)

5.88

Isoelectric Point (pI)

30.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03345 AT5G03345
fragaria_vesca FvH4_6g16280
malus_domestica MD04G1094200.v1.1 MD12G1113800.v1.1
prunus_persica Prupe.6G232700_v2.0.a1
pyrus_communis pycom04g08920 pycom12g11270
rosa_chinensis RchiOBHm_Chr3g0470141
rosa_laevigata RLG00000024293
rosa_multiflora Rmu_sc0005600.1_g000014
rosa_roxburghii Rroxscaffold_6G00411130
rosa_rugosa Rorug03G0107400
rosa_samantha Rh3DG194500
rosa_wichuraiana Rw3G014730 Rw3G014820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 60
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 1 cut(s) 243
AluBI AGCT 1 cut(s) 179
AluI AGCT 1 cut(s) 179
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 1 cut(s) 10
Asp700I GAANNNNTTC 1 cut(s) 147
AspS9I GGNCC 1 cut(s) 119
AsuC2I CCSGG 1 cut(s) 192
AvaII GGWCC 1 cut(s) 119
BbvI GCAGC 1 cut(s) 188
BccI CCATC 2 cut(s) 285, 298
BcnI CCSGG 1 cut(s) 192
BfaI CTAG 1 cut(s) 152
BisI GCNGC 2 cut(s) 60, 177
BlsI GCNGC 2 cut(s) 61, 178
Bme1390I CCNGG 1 cut(s) 192
Bme18I GGWCC 1 cut(s) 119
BmgT120I GGNCC 1 cut(s) 119
BmrFI CCNGG 1 cut(s) 192
BmsI GCATC 1 cut(s) 39
BpuMI CCSGG 1 cut(s) 192
BsaJI CCNNGG 3 cut(s) 34, 190, 297
BsaXI ACNNNNNCTCC 2 cut(s) 95, 125
BseDI CCNNGG 3 cut(s) 34, 190, 297
BseGI GGATG 2 cut(s) 30, 211
BseXI GCAGC 1 cut(s) 188
BsiSI CCGG 1 cut(s) 192
BslFI GGGAC 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 173
Bsp143I GATC 1 cut(s) 267
BspACI CCGC 1 cut(s) 60
BssECI CCNNGG 3 cut(s) 34, 190, 297
BssMI GATC 1 cut(s) 267
BssT1I CCWWGG 1 cut(s) 34
Bst4CI ACNGT 2 cut(s) 73, 187
Bst6I CTCTTC 2 cut(s) 102, 219
BstDSI CCRYGG 1 cut(s) 297
BstF5I GGATG 2 cut(s) 30, 211
BstKTI GATC 1 cut(s) 270
BstMBI GATC 1 cut(s) 267
BstSCI CCNGG 1 cut(s) 190
BstV1I GCAGC 1 cut(s) 188
BtgI CCRYGG 1 cut(s) 297
BtsCI GGATG 2 cut(s) 30, 211
Cfr13I GGNCC 1 cut(s) 119
CviAII CATG 1 cut(s) 56
CviJI RGCY 3 cut(s) 5, 179, 251
CviKI_1 RGCY 3 cut(s) 5, 179, 251
DpnI GATC 1 cut(s) 269
DpnII GATC 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 102, 219
EarI CTCTTC 2 cut(s) 102, 219
Eco130I CCWWGG 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 243
EcoO109I RGGNCCY 1 cut(s) 119
EcoT14I CCWWGG 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 34
FaeI CATG 1 cut(s) 59
FaiI YATR 5 cut(s) 57, 101, 166, 170, 266
FaqI GGGAC 1 cut(s) 173
FatI CATG 1 cut(s) 55
Fnu4HI GCNGC 2 cut(s) 60, 177
FokI GGATG 2 cut(s) 17, 198
Fsp4HI GCNGC 2 cut(s) 60, 177
FspBI CTAG 1 cut(s) 152
GluI GCNGC 2 cut(s) 60, 177
HapII CCGG 1 cut(s) 192
Hin1II CATG 1 cut(s) 59
HinfI GANTC 1 cut(s) 18
HpaII CCGG 1 cut(s) 192
Hpy188I TCNGA 1 cut(s) 223
Hpy188III TCNNGA 1 cut(s) 117
HpyCH4III ACNGT 2 cut(s) 73, 187
HpyCH4IV ACGT 1 cut(s) 197
HpySE526I ACGT 1 cut(s) 197
Hsp92II CATG 1 cut(s) 59
Kzo9I GATC 1 cut(s) 267
LpnPI CCDG 5 cut(s) 67, 102, 205, 261, 298
Lsp1109I GCAGC 1 cut(s) 188
LweI GCATC 1 cut(s) 39
MaeI CTAG 1 cut(s) 152
MaeII ACGT 1 cut(s) 197
MalI GATC 1 cut(s) 269
MboI GATC 1 cut(s) 267
MboII GAAGA 4 cut(s) 106, 119, 236, 262
MluCI AATT 3 cut(s) 10, 45, 143
MnlI CCTC 2 cut(s) 97, 132
MroXI GAANNNNTTC 1 cut(s) 147
MspI CCGG 1 cut(s) 192
MspR9I CCNGG 1 cut(s) 192
NciI CCSGG 1 cut(s) 192
NdeII GATC 1 cut(s) 267
NlaIII CATG 1 cut(s) 59
PdmI GAANNNNTTC 1 cut(s) 147
PfeI GAWTC 1 cut(s) 18
PkrI GCNGC 2 cut(s) 61, 178
PpuMI RGGWCCY 1 cut(s) 119
Psp5II RGGWCCY 1 cut(s) 119
PspPI GGNCC 1 cut(s) 119
PspPPI RGGWCCY 1 cut(s) 119
SatI GCNGC 2 cut(s) 60, 177
Sau3AI GATC 1 cut(s) 267
Sau96I GGNCC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 192
SetI ASST 4 cut(s) 124, 181, 200, 258
SfaNI GCATC 1 cut(s) 39
SinI GGWCC 1 cut(s) 119
Sse9I AATT 3 cut(s) 10, 45, 143
SsiI CCGC 1 cut(s) 60
SspMI CTAG 1 cut(s) 152
StyD4I CCNGG 1 cut(s) 190
StyI CCWWGG 1 cut(s) 34
TaaI ACNGT 2 cut(s) 73, 187
TaiI ACGT 1 cut(s) 200
TasI AATT 3 cut(s) 10, 45, 143
TauI GCSGC 1 cut(s) 62
TfiI GAWTC 1 cut(s) 18
TseI GCWGC 1 cut(s) 176
VpaK11BI GGWCC 1 cut(s) 119
XapI RAATTY 1 cut(s) 10
XmnI GAANNNNTTC 1 cut(s) 147
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.