MD04G1094200.v1.1

membrane magnesium

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
17139368 .. 17141418
2051 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1094200.v1.1.491

Sequence Viewer

Length: 327 bp
ATGGCGATGAGTTTGGGCTTCGTTGTTGGCATCTTGGGAGTTGTAATTCTCTCTCACGCTGCTTATTCAACCGTTCAATACAGGGGATTGTTGAAGATTATGGAGGAACAGTTTTCAGGACCTCCATTAACTGTGGTGGCTGAATTGCTTCTAGGGTTAGCGTTCTGTATGTGGGCGGCACTTACTGTCCCGGGCACGTTTCTTTCGATTCATCCCTATTCTGAAGAGAACAGGATTGTTTCTCTACCAGACAACCTTGACTTTATGATCTTCAACCATCGTGCCAGAGTGTTTCCCGTGGAGTTGGATTTGAAGTTCAAACACTGA

Protein Analysis

109

Amino Acids

12.05

Weight (kDa)

6.02

Isoelectric Point (pI)

28.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G03345 AT5G03345
fragaria_vesca FvH4_6g16280
malus_domestica MD04G1094200.v1.1 MD12G1113800.v1.1
prunus_persica Prupe.6G232700_v2.0.a1
pyrus_communis pycom04g08920 pycom12g11270
rosa_chinensis RchiOBHm_Chr3g0470141
rosa_laevigata RLG00000024293
rosa_multiflora Rmu_sc0005600.1_g000014
rosa_roxburghii Rroxscaffold_6G00411130
rosa_rugosa Rorug03G0107400
rosa_samantha Rh3DG194500
rosa_wichuraiana Rw3G014730 Rw3G014820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 176
AcuI CTGAAG 1 cut(s) 243
AgsI TTSAA 6 cut(s) 69, 77, 94, 274, 313, 319
AloI GAACNNNNNNTCC 1 cut(s) 299
Ama87I CYCGRG 1 cut(s) 190
ApeKI GCWGC 1 cut(s) 59
Asp700I GAANNNNTTC 1 cut(s) 147
AspS9I GGNCC 1 cut(s) 119
AsuC2I CCSGG 2 cut(s) 191, 192
AvaI CYCGRG 1 cut(s) 190
AvaII GGWCC 1 cut(s) 119
BaeGI GKGCMC 1 cut(s) 197
BbvI GCAGC 1 cut(s) 46
BccI CCATC 1 cut(s) 285
BcnI CCSGG 2 cut(s) 191, 192
BfaI CTAG 1 cut(s) 152
BisI GCNGC 2 cut(s) 60, 177
BlsI GCNGC 2 cut(s) 61, 178
Bme1390I CCNGG 2 cut(s) 191, 192
Bme18I GGWCC 1 cut(s) 119
BmeT110I CYCGRG 1 cut(s) 190
BmgT120I GGNCC 1 cut(s) 119
BmrFI CCNGG 2 cut(s) 191, 192
BmsI GCATC 1 cut(s) 39
BpuMI CCSGG 2 cut(s) 191, 192
BsaJI CCNNGG 2 cut(s) 190, 297
BsaXI ACNNNNNCTCC 2 cut(s) 95, 125
BseDI CCNNGG 2 cut(s) 190, 297
BseGI GGATG 1 cut(s) 211
BseSI GKGCMC 1 cut(s) 197
BseXI GCAGC 1 cut(s) 46
BsiHKCI CYCGRG 1 cut(s) 190
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 173
BsoBI CYCGRG 1 cut(s) 190
Bsp1286I GDGCHC 1 cut(s) 197
Bsp143I GATC 1 cut(s) 267
BspACI CCGC 1 cut(s) 176
BssECI CCNNGG 2 cut(s) 190, 297
BssMI GATC 1 cut(s) 267
Bst4CI ACNGT 4 cut(s) 73, 111, 133, 187
Bst6I CTCTTC 1 cut(s) 219
BstDSI CCRYGG 1 cut(s) 297
BstF5I GGATG 1 cut(s) 211
BstKTI GATC 1 cut(s) 270
BstMBI GATC 1 cut(s) 267
BstSCI CCNGG 2 cut(s) 189, 190
BstSLI GKGCMC 1 cut(s) 197
BstV1I GCAGC 1 cut(s) 46
BtgI CCRYGG 1 cut(s) 297
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 1 cut(s) 211
BtsIMutI CAGTG 1 cut(s) 322
Cfr13I GGNCC 1 cut(s) 119
Cfr9I CCCGGG 1 cut(s) 190
CviJI RGCY 2 cut(s) 18, 140
CviKI_1 RGCY 2 cut(s) 18, 140
DpnI GATC 1 cut(s) 269
DpnII GATC 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 243
Eco88I CYCGRG 1 cut(s) 190
EcoO109I RGGNCCY 1 cut(s) 119
FaiI YATR 3 cut(s) 101, 170, 266
FaqI GGGAC 1 cut(s) 173
Fnu4HI GCNGC 2 cut(s) 60, 177
FokI GGATG 1 cut(s) 198
Fsp4HI GCNGC 2 cut(s) 60, 177
FspBI CTAG 1 cut(s) 152
GluI GCNGC 2 cut(s) 60, 177
HapII CCGG 1 cut(s) 191
HinfI GANTC 1 cut(s) 208
HpaII CCGG 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 223
Hpy188III TCNNGA 1 cut(s) 117
HpyCH4III ACNGT 4 cut(s) 73, 111, 133, 187
HpyCH4IV ACGT 1 cut(s) 197
HpySE526I ACGT 1 cut(s) 197
Kzo9I GATC 1 cut(s) 267
LpnPI CCDG 6 cut(s) 67, 102, 204, 217, 261, 298
Lsp1109I GCAGC 1 cut(s) 46
LweI GCATC 1 cut(s) 39
MaeI CTAG 1 cut(s) 152
MaeII ACGT 1 cut(s) 197
MalI GATC 1 cut(s) 269
MboI GATC 1 cut(s) 267
MboII GAAGA 3 cut(s) 106, 236, 262
MhlI GDGCHC 1 cut(s) 197
MluCI AATT 2 cut(s) 45, 143
MmeI TCCRAC 1 cut(s) 285
MnlI CCTC 2 cut(s) 97, 132
MroXI GAANNNNTTC 1 cut(s) 147
MseI TTAA 1 cut(s) 128
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 2 cut(s) 191, 192
NciI CCSGG 2 cut(s) 191, 192
NdeII GATC 1 cut(s) 267
PcsI WCGNNNNNNNCGW 1 cut(s) 203
PdmI GAANNNNTTC 1 cut(s) 147
PfeI GAWTC 1 cut(s) 208
PkrI GCNGC 2 cut(s) 61, 178
PpuMI RGGWCCY 1 cut(s) 119
Psp5II RGGWCCY 1 cut(s) 119
PspPI GGNCC 1 cut(s) 119
PspPPI RGGWCCY 1 cut(s) 119
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 2 cut(s) 60, 177
Sau3AI GATC 1 cut(s) 267
Sau96I GGNCC 1 cut(s) 119
ScrFI CCNGG 2 cut(s) 191, 192
SduI GDGCHC 1 cut(s) 197
SetI ASST 3 cut(s) 124, 200, 258
SfaNI GCATC 1 cut(s) 39
SinI GGWCC 1 cut(s) 119
SmaI CCCGGG 1 cut(s) 192
Sse9I AATT 2 cut(s) 45, 143
SsiI CCGC 1 cut(s) 176
SspMI CTAG 1 cut(s) 152
StyD4I CCNGG 2 cut(s) 189, 190
TaaI ACNGT 4 cut(s) 73, 111, 133, 187
TaiI ACGT 1 cut(s) 200
TaqI TCGA 1 cut(s) 206
TasI AATT 2 cut(s) 45, 143
TauI GCSGC 1 cut(s) 179
TfiI GAWTC 1 cut(s) 208
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TseI GCWGC 1 cut(s) 59
TspDTI ATGAA 1 cut(s) 200
TspMI CCCGGG 1 cut(s) 190
VpaK11BI GGWCC 1 cut(s) 119
XmaI CCCGGG 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 147
XspI CTAG 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.