Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013869

Physical Location & Seq

Genomic Coordinates Reverse (-)

2196428 .. 2198539

Gene Structure 2112 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G07070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGAGAACAAACCAAGTGTATTAACTGAAAGATATGAAGTTGGGAGGTTATTGGGTCAAGGTACTTTTGCTAAAGTGTATTTTGGAAGGAGTAATCATACCAACGAGAGTGTAGCTATCAAGATGATTGACAAGGACAAAGTTATGAGAGTCGGGCTTAGCCAGCAAATCAAGCGAGAGATCTCTGTAATGAGGATCGCTAAACACCCGAATGTCGTTGAGTTATACGAGGTTATGGCTACAAAGTCAAGGATTTACTTTGTTATTGAGTATTGTAAAGGTGGTGAGCTTTTCAACAAGGTTGCAAAAGGAAAACTTAAAGAAGATGTTGCTTGGAAGTATTTTTATCAGCTTATTAGTGCGGTTGATTTTTGTCACAGCCGCGGAGTTTATCACCGCGACATTAAGCCGGAAAATCTTTTGTTGGATGACAATGATAATCTTAAGGTATCTGATTTTGGTTTAAGTGCGCTTGCTGATTGCAAGCGGCAAGATGGTCTTCTACATACAACTTGTGGTACACCTGCTTATGTTGCGCCCGAGGTTATTAACCGAAAAGGATACGAGGGTACGAAAGCGGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTCTTTTGGCTGGTTATCTTCCTTTCCATGACACTAATCTTATGGAGATGTATAGGAAGATAGGTAAAGCAGACTTCAAGTGTCCCAGCTGGTTTGCTCCTGAGGTAAAGAGACTATTGTGTAAGATGTTGGACCCTAACCATGAGACTAGAATCACTATTGCAAAAATCAAGGAGAGTTCTTGGTTCAGAAAGGGTTTGCATTTGAAGCAAAAAAAGATGGAAAAGATGGAGAAACAACAAGTCAGAGAGGCTACTAATCCCATGGAAGCTGGAGGTTCAGGCCAAAATGAAAACGGAGAAAACCACGAGCCGCCTCGACTTGCTACCTTGAATGCTTTCGATATCATCGCCTTGTCTACGGGGTTTGGTCTGGCAGGACTTTTTGGGGATGTATATGACAAGCGAGAATCTAGGTTCGCGTCGCAAAAACCTGCTTCAGAGATCATTTCTAAGCTAGTAGAGGTTGCCAAGTGCCTGAAGCTGAAGATAAGAAAGCAAGGCGCAGGCTTGTTCAAACTGGAAAGAGTAAAGGAAGGAAAAAACGGAATTTTGACGATGGATGCAGAGATATTCCAAGTGACGCCGACGTTTCACCTGGTGGAAGTGAAGAAATGTAATGGAGATACAATGGAGTATCAGAAGTTAGTGGAGGAGGATCTTAGGCCTGCTTTGGCAGATATTGTTTGGGTTTGGCAAGGCGAGAAGGAGAAAGAGGAGCAGTTACTGCAGGATGAACAAGGAGAGCAAGAACCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018107 GO:0018193 GO:0018209 GO:0018210 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

ko04068 ko04113 ko04138 ko04140 ko04150 ko04151 ko04152 ko04211 ko04213 ko04371 ko04530 ko04710 ko04714 ko04910 ko04920 ko04921 ko04922 ko04931 ko04932 ko05410 ko05418 map04068 map04113 map04138 map04140 map04150 map04151 map04152 map04211 map04213 map04371 map04530 map04710 map04714 map04910 map04920 map04921 map04922 map04931 map04932 map05410 map05418

Pfam Domains

Protein Families

NAF Pkinase

Protein Analysis

456

Amino Acids

51.87

Weight (kDa)

8.5

Isoelectric Point (pI)

29.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	12 - 266	5e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	14 - 262	2.5e-41	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	116 - 254	4.5e-06	Kinase-like
NAF	PF03822	313 - 369	1.5e-19	NAF domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07070 AT5G58380
fragaria_vesca	FvH4_3g40220 FvH4_3g40220
malus_domestica	MD03G1059600.v1.1 MD11G1061700.v1.1
prunus_persica	Prupe.6G043700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0072431
rosa_laevigata	RLG00000036298
rosa_multiflora	Rmu_sc0008676.1_g000003
rosa_roxburghii	Rroxscaffold_1G00008780
rosa_rugosa	Rorug05G0418100 Rorug05G0418200
rosa_samantha	Rh5AG474600 Rh5BG494700 Rh5CG518700
rosa_wichuraiana	Rw5G044070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	532
Acc36I	ACCTGC	2 cut(s)	532, 1051
AccI	GTMKAC	1 cut(s)	968
AccII	CGCG	3 cut(s)	384, 399, 1031
AciI	CCGC	7 cut(s)	362, 382, 384, 397, 487, 578, 923
AclWI	GGATC	2 cut(s)	203, 1275
AcsI	RAATTY	1 cut(s)	1158
AcuI	CTGAAG	3 cut(s)	1032, 1109, 1115
AcyI	GRCGYC	1 cut(s)	1193
AdeI	CACNNNGTG	1 cut(s)	1210
AfaI	GTAC	3 cut(s)	64, 520, 571
AflII	CTTAAG	1 cut(s)	443
AgsI	TTSAA	5 cut(s)	295, 688, 817, 943, 1126
AjnI	CCWGG	1 cut(s)	1206
AluBI	AGCT	7 cut(s)	116, 289, 352, 699, 881, 1066, 1093
AluI	AGCT	7 cut(s)	116, 289, 352, 699, 881, 1066, 1093
Alw26I	GTCTC	2 cut(s)	715, 749
AlwI	GGATC	2 cut(s)	203, 1275
AlwNI	CAGNNNCTG	1 cut(s)	1336
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	2 cut(s)	892, 1274
ApoI	RAATTY	1 cut(s)	1158
Asp700I	GAANNNNTTC	1 cut(s)	947
AspLEI	GCGC	3 cut(s)	472, 538, 1115
AspS9I	GGNCC	1 cut(s)	742
AsuHPI	GGTGA	3 cut(s)	296, 386, 1196
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	742
AxyI	CCTNAGG	1 cut(s)	711
BaeI	ACNNNNGTAYC	2 cut(s)	553, 586
BauI	CACGAG	1 cut(s)	917
BbsI	GAAGAC	1 cut(s)	491
BccI	CCATC	4 cut(s)	488, 823, 832, 1162
BciT130I	CCWGG	1 cut(s)	1208
BciVI	GTATCC	1 cut(s)	554
BcoDI	GTCTC	2 cut(s)	715, 749
BfaI	CTAG	3 cut(s)	759, 1023, 1067
BfmI	CTRYAG	1 cut(s)	1337
BfrI	CTTAAG	1 cut(s)	443
BfuAI	ACCTGC	2 cut(s)	532, 1051
BfuI	GTATCC	1 cut(s)	554
BglII	AGATCT	1 cut(s)	180
BisI	GCNGC	3 cut(s)	382, 488, 923
BlpI	GCTNAGC	1 cut(s)	158
BlsI	GCNGC	3 cut(s)	383, 489, 924
Bme1390I	CCNGG	1 cut(s)	1208
Bme18I	GGWCC	1 cut(s)	742
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	1 cut(s)	742
BmiI	GGNNCC	1 cut(s)	744
BmrFI	CCNGG	1 cut(s)	1208
BmsI	GCATC	1 cut(s)	1162
BpiI	GAAGAC	1 cut(s)	491
BpmI	CTGGAG	1 cut(s)	903
Bpu1102I	GCTNAGC	1 cut(s)	158
BsaHI	GRCGYC	1 cut(s)	1193
BsaJI	CCNNGG	3 cut(s)	382, 540, 873
Bse1I	ACTGG	1 cut(s)	1134
Bse21I	CCTNAGG	1 cut(s)	711
BseBI	CCWGG	1 cut(s)	1208
BseDI	CCNNGG	3 cut(s)	382, 540, 873
BseGI	GGATG	4 cut(s)	433, 1006, 1177, 1348
BseMII	CTCAG	1 cut(s)	702
BseNI	ACTGG	1 cut(s)	1134
BseRI	GAGGAG	2 cut(s)	1277, 1340
BseYI	CCCAGC	1 cut(s)	695
Bsh1236I	CGCG	3 cut(s)	384, 399, 1031
BshFI	GGCC	2 cut(s)	894, 1276
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	1 cut(s)	410
BslFI	GGGAC	1 cut(s)	678
BsmAI	GTCTC	2 cut(s)	715, 749
BsmFI	GGGAC	1 cut(s)	678
BsmI	GAATGC	1 cut(s)	949
BsnI	GGCC	2 cut(s)	894, 1276
BsoBI	CYCGRG	1 cut(s)	539
Bsp143I	GATC	4 cut(s)	180, 195, 1053, 1267
Bsp1720I	GCTNAGC	1 cut(s)	158
Bsp19I	CCATGG	1 cut(s)	873
BspACI	CCGC	7 cut(s)	362, 382, 384, 397, 487, 578, 923
BspANI	GGCC	2 cut(s)	894, 1276
BspCNI	CTCAG	1 cut(s)	703
BspFNI	CGCG	3 cut(s)	384, 399, 1031
BspLI	GGNNCC	1 cut(s)	744
BspMAI	CTGCAG	1 cut(s)	1341
BspMI	ACCTGC	2 cut(s)	532, 1051
BspPI	GGATC	2 cut(s)	203, 1275
BspTI	CTTAAG	1 cut(s)	443
BsrI	ACTGG	1 cut(s)	1134
BssECI	CCNNGG	3 cut(s)	382, 540, 873
BssMI	GATC	4 cut(s)	180, 195, 1053, 1267
BssNI	GRCGYC	1 cut(s)	1193
BssSI	CACGAG	1 cut(s)	917
BssT1I	CCWWGG	1 cut(s)	873
Bst2BI	CACGAG	1 cut(s)	917
Bst2UI	CCWGG	1 cut(s)	1208
BstACI	GRCGYC	1 cut(s)	1193
BstAFI	CTTAAG	1 cut(s)	443
BstAPI	GCANNNNNTGC	1 cut(s)	1336
BstC8I	GCNNGC	5 cut(s)	164, 474, 485, 1117, 1278
BstDEI	CTNAG	4 cut(s)	158, 711, 1062, 1271
BstDSI	CCRYGG	2 cut(s)	382, 873
BstF5I	GGATG	4 cut(s)	433, 1006, 1177, 1348
BstFNI	CGCG	3 cut(s)	384, 399, 1031
BstHHI	GCGC	3 cut(s)	472, 538, 1115
BstKTI	GATC	4 cut(s)	183, 198, 1056, 1270
BstMAI	GTCTC	2 cut(s)	715, 749
BstMBI	GATC	4 cut(s)	180, 195, 1053, 1267
BstMWI	GCNNNNNNNGC	5 cut(s)	163, 172, 533, 817, 1336
BstNI	CCWGG	1 cut(s)	1208
BstSCI	CCNGG	1 cut(s)	1206
BstSFI	CTRYAG	1 cut(s)	1337
BstUI	CGCG	3 cut(s)	384, 399, 1031
BstV2I	GAAGAC	1 cut(s)	491
BstX2I	RGATCY	2 cut(s)	180, 1267
BstYI	RGATCY	2 cut(s)	180, 1267
Bsu36I	CCTNAGG	1 cut(s)	711
BsuI	GTATCC	1 cut(s)	554
BsuRI	GGCC	2 cut(s)	894, 1276
BtgI	CCRYGG	2 cut(s)	382, 873
BtgZI	GCGATG	1 cut(s)	943
BtsCI	GGATG	4 cut(s)	433, 1006, 1177, 1348
BveI	ACCTGC	2 cut(s)	532, 1051
Cac8I	GCNNGC	5 cut(s)	164, 474, 485, 1117, 1278
CaiI	CAGNNNCTG	1 cut(s)	1336
CfoI	GCGC	3 cut(s)	472, 538, 1115
Cfr13I	GGNCC	1 cut(s)	742
Cfr42I	CCGCGG	1 cut(s)	385
CseI	GACGC	2 cut(s)	1020, 1201
CsiI	ACCWGGT	1 cut(s)	1206
Csp6I	GTAC	3 cut(s)	63, 519, 570
CviAII	CATG	3 cut(s)	638, 752, 874
CviQI	GTAC	3 cut(s)	63, 519, 570
DdeI	CTNAG	4 cut(s)	158, 711, 1062, 1271
DpnI	GATC	4 cut(s)	182, 197, 1055, 1269
DpnII	GATC	4 cut(s)	180, 195, 1053, 1267
DraIII	CACNNNGTG	1 cut(s)	1210
Eco130I	CCWWGG	1 cut(s)	873
Eco147I	AGGCCT	1 cut(s)	1276
Eco32I	GATATC	1 cut(s)	955
Eco47I	GGWCC	1 cut(s)	742
Eco57I	CTGAAG	3 cut(s)	1032, 1109, 1115
Eco81I	CCTNAGG	1 cut(s)	711
Eco88I	CYCGRG	1 cut(s)	539
EcoRII	CCWGG	1 cut(s)	1206
EcoRV	GATATC	1 cut(s)	955
EcoT14I	CCWWGG	1 cut(s)	873
ErhI	CCWWGG	1 cut(s)	873
FaeI	CATG	3 cut(s)	641, 755, 877
FalI	AAGNNNNNCTT	4 cut(s)	300, 332, 483, 515
FaqI	GGGAC	1 cut(s)	678
FatI	CATG	3 cut(s)	637, 751, 873
FblI	GTMKAC	1 cut(s)	968
Fnu4HI	GCNGC	3 cut(s)	382, 488, 923
FokI	GGATG	4 cut(s)	440, 1013, 1184, 1355
Fsp4HI	GCNGC	3 cut(s)	382, 488, 923
FspBI	CTAG	3 cut(s)	759, 1023, 1067
GlaI	GCGC	3 cut(s)	471, 537, 1114
GluI	GCNGC	3 cut(s)	382, 488, 923
GsaI	CCCAGC	1 cut(s)	699
GsuI	CTGGAG	1 cut(s)	903
HaeIII	GGCC	2 cut(s)	894, 1276
HapII	CCGG	1 cut(s)	410
HgaI	GACGC	2 cut(s)	1020, 1201
HhaI	GCGC	3 cut(s)	472, 538, 1115
Hin1I	GRCGYC	1 cut(s)	1193
Hin1II	CATG	3 cut(s)	641, 755, 877
Hin6I	GCGC	3 cut(s)	470, 536, 1113
HinP1I	GCGC	3 cut(s)	470, 536, 1113
HinfI	GANTC	3 cut(s)	150, 762, 1019
HpaII	CCGG	1 cut(s)	410
HphI	GGTGA	3 cut(s)	296, 386, 1196
Hpy166II	GTNNAC	2 cut(s)	521, 969
Hpy188I	TCNGA	5 cut(s)	454, 800, 857, 1051, 1251
Hpy188III	TCNNGA	2 cut(s)	121, 710
Hpy8I	GTNNAC	2 cut(s)	521, 969
Hpy99I	CGWCG	2 cut(s)	1036, 1201
HpyAV	CCTTC	3 cut(s)	81, 1139, 1309
HpyCH4IV	ACGT	1 cut(s)	1199
HpyCH4V	TGCA	6 cut(s)	305, 483, 773, 811, 1175, 1339
HpyF10VI	GCNNNNNNNGC	5 cut(s)	163, 172, 533, 817, 1336
HpyF3I	CTNAG	4 cut(s)	158, 711, 1062, 1271
HpySE526I	ACGT	1 cut(s)	1199
Hsp92I	GRCGYC	1 cut(s)	1193
Hsp92II	CATG	3 cut(s)	641, 755, 877
HspAI	GCGC	3 cut(s)	470, 536, 1113
KspI	CCGCGG	1 cut(s)	385
Kzo9I	GATC	4 cut(s)	180, 195, 1053, 1267
LmnI	GCTCC	2 cut(s)	712, 1327
LweI	GCATC	1 cut(s)	1162
MabI	ACCWGGT	1 cut(s)	1206
MaeI	CTAG	3 cut(s)	759, 1023, 1067
MaeII	ACGT	1 cut(s)	1199
MaeIII	GTNAC	3 cut(s)	374, 1189, 1332
MalI	GATC	4 cut(s)	182, 197, 1055, 1269
MboI	GATC	4 cut(s)	180, 195, 1053, 1267
MboII	GAAGA	6 cut(s)	335, 491, 620, 679, 1108, 1231
MflI	RGATCY	2 cut(s)	180, 1267
MluCI	AATT	1 cut(s)	1158
MlyI	GAGTC	1 cut(s)	159
MmeI	TCCRAC	2 cut(s)	405, 720
MroXI	GAANNNNTTC	1 cut(s)	947
MseI	TTAA	6 cut(s)	23, 318, 405, 444, 464, 549
MslI	CAYNNNNRTG	1 cut(s)	210
MspA1I	CMGCKG	2 cut(s)	384, 699
MspCI	CTTAAG	1 cut(s)	443
MspI	CCGG	1 cut(s)	410
MspR9I	CCNGG	1 cut(s)	1208
Mva1269I	GAATGC	1 cut(s)	949
MvaI	CCWGG	1 cut(s)	1208
MvnI	CGCG	3 cut(s)	384, 399, 1031
MwoI	GCNNNNNNNGC	5 cut(s)	163, 172, 533, 817, 1336
NcoI	CCATGG	1 cut(s)	873
NdeII	GATC	4 cut(s)	180, 195, 1053, 1267
NlaIII	CATG	3 cut(s)	641, 755, 877
NlaIV	GGNNCC	1 cut(s)	744
NmuCI	GTSAC	2 cut(s)	374, 1189
PaqCI	CACCTGC	1 cut(s)	532
PceI	AGGCCT	1 cut(s)	1276
PctI	GAATGC	1 cut(s)	949
PdmI	GAANNNNTTC	1 cut(s)	947
PfeI	GAWTC	2 cut(s)	762, 1019
PkrI	GCNGC	3 cut(s)	383, 489, 924
PleI	GAGTC	1 cut(s)	158
PpsI	GAGTC	1 cut(s)	158
Psp6I	CCWGG	1 cut(s)	1206
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	1 cut(s)	1206
PspN4I	GGNNCC	1 cut(s)	744
PspPI	GGNCC	1 cut(s)	742
PstI	CTGCAG	1 cut(s)	1341
PstNI	CAGNNNCTG	1 cut(s)	1336
PsuI	RGATCY	2 cut(s)	180, 1267
PvuII	CAGCTG	1 cut(s)	699
RsaI	GTAC	3 cut(s)	64, 520, 571
RsaNI	GTAC	3 cut(s)	63, 519, 570
RseI	CAYNNNNRTG	1 cut(s)	210
SacII	CCGCGG	1 cut(s)	385
SaqAI	TTAA	6 cut(s)	23, 318, 405, 444, 464, 549
SatI	GCNGC	3 cut(s)	382, 488, 923
Sau3AI	GATC	4 cut(s)	180, 195, 1053, 1267
Sau96I	GGNCC	1 cut(s)	742
SchI	GAGTC	1 cut(s)	159
ScrFI	CCNGG	1 cut(s)	1208
SexAI	ACCWGGT	1 cut(s)	1206
SfaNI	GCATC	1 cut(s)	1162
SfcI	CTRYAG	1 cut(s)	1337
Sfr303I	CCGCGG	1 cut(s)	385
SgrBI	CCGCGG	1 cut(s)	385
SinI	GGWCC	1 cut(s)	742
SmiMI	CAYNNNNRTG	1 cut(s)	210
SmlI	CTYRAG	1 cut(s)	443
SmoI	CTYRAG	1 cut(s)	443
Sse9I	AATT	1 cut(s)	1158
SseBI	AGGCCT	1 cut(s)	1276
SsiI	CCGC	7 cut(s)	362, 382, 384, 397, 487, 578, 923
SspMI	CTAG	3 cut(s)	759, 1023, 1067
StuI	AGGCCT	1 cut(s)	1276
StyD4I	CCNGG	1 cut(s)	1206
StyI	CCWWGG	1 cut(s)	873
TaiI	ACGT	1 cut(s)	1202
TaqI	TCGA	2 cut(s)	928, 951
TasI	AATT	1 cut(s)	1158
TauI	GCSGC	3 cut(s)	384, 490, 925
TfiI	GAWTC	2 cut(s)	762, 1019
Tru1I	TTAA	6 cut(s)	23, 318, 405, 444, 464, 549
Tru9I	TTAA	6 cut(s)	23, 318, 405, 444, 464, 549
TseFI	GTSAC	2 cut(s)	374, 1189
Tsp45I	GTSAC	2 cut(s)	374, 1189
TspDTI	ATGAA	3 cut(s)	51, 915, 1359
TspGWI	ACGGA	2 cut(s)	921, 1170
Vha464I	CTTAAG	1 cut(s)	443
VpaK11BI	GGWCC	1 cut(s)	742
XapI	RAATTY	1 cut(s)	1158
XmiI	GTMKAC	1 cut(s)	968
XmnI	GAANNNNTTC	1 cut(s)	947
XspI	CTAG	3 cut(s)	759, 1023, 1067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.