AT5G07800

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011359
Physical Location & Seq
Reverse (-)
2486540 .. 2489408
2869 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07800.1

Sequence Viewer

Length: 1383 bp
ATGGTTACGTTCACATCAGAAGCATCAAGGAGCCGATCAAAGAAGGTATGTGTGATCGGAGCTGGACCGGCGGGGTTAGTCTCGGCAAGGGAGCTAAGAAAAGAAGGACACAAAGTGGTGGTGTTGGAGCAAAACGAAGACGTAGGAGGTCAATGGTTCTATCAACCAAACGTAGAAGAAGAAGATCCCTTAGGAAGAAGTAGTGGTTCCATTAATGGTGAACTGAAGGTCCATAGCAGCATTTACTCTTCCTTGAGGCTAACCTCACCGAGAGAGATAATGGGTTATTCGGATTTTCCGTTTTTGGCGAAGAAAGGGAGAGATATGAGGAGGTTTCCAGGGCATAAGGAGCTTTGGTTGTATCTTAAGGACTTTAGTGAAGCTTTTGGGTTAAGAGAGATGATTAGGTTTAATGTTAGGGTTGAGTTTGTAGGAGAAAAAGAAGAAGAGGATGATGTGAAGAAGTGGATTGTGAGAAGTAGAGAGAAATTTAGTGGTAAGGTTATGGAAGAGATCTTTGATGCTGTTGTTGTTGCTACTGGTCATTACTCTCACCCTAGATTGCCCTCTATTAAAGGAATGGATTCTTGGAAAAGGAAGCAAATTCATAGCCATGTTTACAGGGTGCCTGATCCATTTCGTAATGAGGTGGTGGTGGTGGTTGGGAACTCAATGAGTGGACAAGACATATCAATGGAGCTTGTGGAAGTGGCAAAGGAAGTTCATTTAAGTGCCAAGACACTTGATATATCTTCTGGCCTTTCAAAAGTCATTTCCAAACACCCAAACCTTCTTATTCACCCACAGATTGAATCTTTAGAGGATGATGGGAAAGTCATTTTTGTGGATGGTTCTTGGGTCGTCGCTGATACAATTTTATATTGCACCGGGTACTCGTACAAGTTTCCATTTCTTGAGAGTAAAGGAAGAATAGAAGTGGATGATGATAGAGTTGGTCCACTCTTCGAACACACTTTCCCTCCTTGTCTCTCCCCTTCTCTCTCCTTTGTCGGTATCCCCAGAAAGTTGATAGGATTCCCATTCTTTGAAGCACAAGCAAAATGGATAGCACAAGTTTTGTCAGGAAAGTCATCTCTTCCTTCTCCTGACCAAATGTTACAATCAGTAGACGAGTTTTACCGGTCAAGAGATCTAGCCGGAGTCCCTAAACACAACACTCACGACATTGCCGATTTCACGTATTGCGATAAGTACGCGGATTATGTTGGGTTTCCGCATTTAGAAGATTGGAGAAAGCTACTATGTTTGTCTGCTCTCAATAATTCACAAGAAAATCTTGAGACTTATCGCGATTCTTGGGATGATCATGAACTCCTACAAGAAGCTCTTCAAAGCTCTCATTTCACAAACTTCAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like K_oxygenase

Protein Analysis

460

Amino Acids

52.34

Weight (kDa)

5.85

Isoelectric Point (pI)

47.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 14 - 247 2.5e-35 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 14 - 314 1.7e-20 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 15 - 50 1.7e-07 FAD dependent oxidoreductase
HI0933_like PF03486 15 - 49 5.8e-06 HI0933-like protein Rossmann domain
FAD_binding_3 PF01494 15 - 46 2.3e-06 FAD binding domain
FAD_binding_2 PF00890 16 - 52 4.6e-06 FAD binding domain
NAD_binding_8 PF13450 18 - 54 4.9e-10 NAD(P)-binding Rossmann-like domain
Pyr_redox_3 PF13738 91 - 317 2.6e-14 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 266 - 410 2.5e-14 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07800
fragaria_vesca FvH4_5g14390
malus_domestica MD06G1199100.v1.1 MD14G1206500.v1.1 MD14G1206800.v1.1 MD14G1207200.v1.1
prunus_persica Prupe.5G199900_v2.0.a1
pyrus_communis pycom14g17100 pycom14g17110 pycom14g17120
rosa_chinensis RchiOBHm_Chr7g0182301
rosa_laevigata RLG00000005134
rosa_multiflora Rmu_sc0000003.1_g000007
rosa_roxburghii Rroxscaffold_3G00271340
rosa_rugosa Rorug06G0446900
rosa_samantha Rh7AG049800 Rh7BG049900 Rh7CG051200 Rh7DG049100
rosa_wichuraiana Rw7G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 625
AccI GTMKAC 1 cut(s) 1128
AccII CGCG 2 cut(s) 1217, 1311
AciI CCGC 3 cut(s) 71, 1217, 1235
AclWI GGATC 2 cut(s) 179, 626
AcsI RAATTY 2 cut(s) 488, 603
AcuI CTGAAG 1 cut(s) 245
AdeI CACNNNGTG 1 cut(s) 115
AfaI GTAC 3 cut(s) 893, 899, 1214
AflII CTTAAG 1 cut(s) 365
AgeI ACCGGT 1 cut(s) 1140
AgsI TTSAA 5 cut(s) 765, 812, 1049, 1352, 1375
AjnI CCWGG 1 cut(s) 337
AjuI GAANNNNNNNTTGG 2 cut(s) 571, 603
AloI GAACNNNNNNTCC 4 cut(s) 213, 245, 960, 992
AluBI AGCT 8 cut(s) 62, 94, 352, 383, 700, 1258, 1346, 1356
AluI AGCT 8 cut(s) 62, 94, 352, 383, 700, 1258, 1346, 1356
Alw26I GTCTC 3 cut(s) 85, 992, 1295
AlwI GGATC 2 cut(s) 179, 626
AoxI GGCC 1 cut(s) 757
ApeKI GCWGC 1 cut(s) 237
ApoI RAATTY 2 cut(s) 488, 603
AseI ATTAAT 1 cut(s) 213
AsiGI ACCGGT 1 cut(s) 1140
Asp700I GAANNNNTTC 2 cut(s) 583, 1347
AspS9I GGNCC 3 cut(s) 65, 229, 956
AsuC2I CCSGG 1 cut(s) 889
AsuHPI GGTGA 4 cut(s) 230, 258, 545, 791
AsuII TTCGAA 1 cut(s) 966
AvaII GGWCC 3 cut(s) 65, 229, 956
AxyI CCTNAGG 1 cut(s) 190
BanI GGYRCC 1 cut(s) 625
BbsI GAAGAC 1 cut(s) 144
BbvI GCAGC 1 cut(s) 249
BccI CCATC 2 cut(s) 821, 842
BciT130I CCWGG 1 cut(s) 339
BciVI GTATCC 1 cut(s) 1025
BclI TGATCA 1 cut(s) 1324
BcnI CCSGG 1 cut(s) 889
BcoDI GTCTC 3 cut(s) 85, 992, 1295
BfaI CTAG 2 cut(s) 558, 1154
BfrI CTTAAG 1 cut(s) 365
BfuI GTATCC 1 cut(s) 1025
BglII AGATCT 2 cut(s) 513, 1150
BisI GCNGC 1 cut(s) 238
BlsI GCNGC 1 cut(s) 239
Bme1390I CCNGG 2 cut(s) 339, 889
Bme18I GGWCC 3 cut(s) 65, 229, 956
BmgT120I GGNCC 3 cut(s) 65, 229, 956
BmiI GGNNCC 3 cut(s) 32, 208, 627
BmrFI CCNGG 2 cut(s) 339, 889
BmsI GCATC 2 cut(s) 32, 511
BpiI GAAGAC 1 cut(s) 144
Bpu14I TTCGAA 1 cut(s) 966
BpuEI CTTGAG 3 cut(s) 274, 935, 1319
BpuMI CCSGG 1 cut(s) 889
BsaAI YACGTR 1 cut(s) 1200
BsaJI CCNNGG 1 cut(s) 338
BsaWI WCCGGW 1 cut(s) 1140
BsaXI ACNNNNNCTCC 4 cut(s) 341, 371, 964, 994
Bse118I RCCGGY 2 cut(s) 67, 1140
Bse1I ACTGG 1 cut(s) 544
Bse21I CCTNAGG 1 cut(s) 190
Bse3DI GCAATG 1 cut(s) 1185
BseBI CCWGG 1 cut(s) 339
BseDI CCNNGG 1 cut(s) 338
BseGI GGATG 5 cut(s) 457, 829, 853, 946, 1327
BseMI GCAATG 1 cut(s) 1185
BseNI ACTGG 1 cut(s) 544
BseRI GAGGAG 1 cut(s) 343
BseXI GCAGC 1 cut(s) 249
Bsh1236I CGCG 2 cut(s) 1217, 1311
BshFI GGCC 1 cut(s) 759
BshNI GGYRCC 1 cut(s) 625
BshTI ACCGGT 1 cut(s) 1140
BsiSI CCGG 4 cut(s) 68, 888, 1141, 1158
BslFI GGGAC 1 cut(s) 1148
BsmAI GTCTC 3 cut(s) 85, 992, 1295
BsmFI GGGAC 1 cut(s) 1148
BsnI GGCC 1 cut(s) 759
Bsp119I TTCGAA 1 cut(s) 966
Bsp143I GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
Bsp68I TCGCGA 1 cut(s) 1311
BspACI CCGC 3 cut(s) 71, 1217, 1235
BspANI GGCC 1 cut(s) 759
BspFNI CGCG 2 cut(s) 1217, 1311
BspHI TCATGA 1 cut(s) 1327
BspLI GGNNCC 3 cut(s) 32, 208, 627
BspPI GGATC 2 cut(s) 179, 626
BspQI GCTCTTC 1 cut(s) 1353
BspT104I TTCGAA 1 cut(s) 966
BspT107I GGYRCC 1 cut(s) 625
BspTI CTTAAG 1 cut(s) 365
BsrDI GCAATG 1 cut(s) 1185
BsrFI RCCGGY 2 cut(s) 67, 1140
BsrI ACTGG 1 cut(s) 544
BssAI RCCGGY 2 cut(s) 67, 1140
BssECI CCNNGG 1 cut(s) 338
BssMI GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
Bst2UI CCWGG 1 cut(s) 339
Bst6I CTCTTC 6 cut(s) 253, 441, 504, 968, 1101, 1353
BstAFI CTTAAG 1 cut(s) 365
BstBAI YACGTR 1 cut(s) 1200
BstBI TTCGAA 1 cut(s) 966
BstDEI CTNAG 2 cut(s) 95, 190
BstF5I GGATG 5 cut(s) 457, 829, 853, 946, 1327
BstFNI CGCG 2 cut(s) 1217, 1311
BstKTI GATC 7 cut(s) 38, 57, 187, 516, 634, 1153, 1327
BstMAI GTCTC 3 cut(s) 85, 992, 1295
BstMBI GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
BstMWI GCNNNNNNNGC 2 cut(s) 68, 349
BstNI CCWGG 1 cut(s) 339
BstSCI CCNGG 2 cut(s) 337, 887
BstUI CGCG 2 cut(s) 1217, 1311
BstV1I GCAGC 1 cut(s) 249
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 3 cut(s) 184, 513, 1150
BstYI RGATCY 3 cut(s) 184, 513, 1150
Bsu36I CCTNAGG 1 cut(s) 190
BsuI GTATCC 1 cut(s) 1025
BsuRI GGCC 1 cut(s) 759
BtsCI GGATG 5 cut(s) 457, 829, 853, 946, 1327
BtuMI TCGCGA 1 cut(s) 1311
CciI TCATGA 1 cut(s) 1327
Cfr10I RCCGGY 2 cut(s) 67, 1140
Cfr13I GGNCC 3 cut(s) 65, 229, 956
Csp6I GTAC 3 cut(s) 892, 898, 1213
CspAI ACCGGT 1 cut(s) 1140
CviAII CATG 2 cut(s) 614, 1328
CviQI GTAC 3 cut(s) 892, 898, 1213
DdeI CTNAG 2 cut(s) 95, 190
DpnI GATC 7 cut(s) 37, 56, 186, 515, 633, 1152, 1326
DpnII GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
DraIII CACNNNGTG 1 cut(s) 115
Eam1104I CTCTTC 6 cut(s) 253, 441, 504, 968, 1101, 1353
EarI CTCTTC 6 cut(s) 253, 441, 504, 968, 1101, 1353
Eco47I GGWCC 3 cut(s) 65, 229, 956
Eco57I CTGAAG 1 cut(s) 245
Eco81I CCTNAGG 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 337
FaeI CATG 2 cut(s) 617, 1331
FalI AAGNNNNNCTT 4 cut(s) 1281, 1313, 1332, 1364
FaqI GGGAC 1 cut(s) 1148
FatI CATG 2 cut(s) 613, 1327
FauI CCCGC 1 cut(s) 64
FbaI TGATCA 1 cut(s) 1324
FblI GTMKAC 1 cut(s) 1128
Fnu4HI GCNGC 1 cut(s) 238
FokI GGATG 5 cut(s) 464, 836, 860, 953, 1334
Fsp4HI GCNGC 1 cut(s) 238
FspBI CTAG 2 cut(s) 558, 1154
GluI GCNGC 1 cut(s) 238
HaeIII GGCC 1 cut(s) 759
HapII CCGG 4 cut(s) 68, 888, 1141, 1158
Hin1II CATG 2 cut(s) 617, 1331
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 5 cut(s) 584, 812, 1035, 1161, 1313
HpaII CCGG 4 cut(s) 68, 888, 1141, 1158
HphI GGTGA 4 cut(s) 230, 258, 545, 791
Hpy166II GTNNAC 6 cut(s) 12, 221, 619, 680, 959, 1129
Hpy188I TCNGA 3 cut(s) 19, 59, 292
Hpy188III TCNNGA 9 cut(s) 914, 1083, 1106, 1146, 1181, 1298, 1310, 1328, 1380
Hpy8I GTNNAC 6 cut(s) 12, 221, 619, 680, 959, 1129
Hpy99I CGWCG 1 cut(s) 866
HpyAV CCTTC 6 cut(s) 37, 98, 220, 800, 1005, 1110
HpyCH4IV ACGT 4 cut(s) 8, 141, 171, 1199
HpyCH4V TGCA 1 cut(s) 885
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 349
HpyF3I CTNAG 2 cut(s) 95, 190
HpySE526I ACGT 4 cut(s) 8, 141, 171, 1199
Hsp92II CATG 2 cut(s) 617, 1331
Ksp22I TGATCA 1 cut(s) 1324
Kzo9I GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
LguI GCTCTTC 1 cut(s) 1353
LmnI GCTCC 6 cut(s) 30, 59, 91, 127, 349, 697
Lsp1109I GCAGC 1 cut(s) 249
LweI GCATC 2 cut(s) 32, 511
MaeI CTAG 2 cut(s) 558, 1154
MaeII ACGT 4 cut(s) 8, 141, 171, 1199
MaeIII GTNAC 2 cut(s) 4, 1116
MalI GATC 7 cut(s) 37, 56, 186, 515, 633, 1152, 1326
MboI GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
MflI RGATCY 3 cut(s) 184, 513, 1150
MluCI AATT 5 cut(s) 488, 603, 873, 1282, 1375
MlyI GAGTC 1 cut(s) 1170
MmeI TCCRAC 1 cut(s) 105
MroXI GAANNNNTTC 2 cut(s) 583, 1347
MseI TTAA 6 cut(s) 213, 366, 392, 411, 573, 728
MslI CAYNNNNRTG 4 cut(s) 612, 692, 729, 842
MspCI CTTAAG 1 cut(s) 365
MspI CCGG 4 cut(s) 68, 888, 1141, 1158
MspR9I CCNGG 2 cut(s) 339, 889
MvaI CCWGG 1 cut(s) 339
MvnI CGCG 2 cut(s) 1217, 1311
MwoI GCNNNNNNNGC 2 cut(s) 68, 349
NciI CCSGG 1 cut(s) 889
NdeII GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
NlaIII CATG 2 cut(s) 617, 1331
NlaIV GGNNCC 3 cut(s) 32, 208, 627
NmeAIII GCCGAG 1 cut(s) 62
NruI TCGCGA 1 cut(s) 1311
NspV TTCGAA 1 cut(s) 966
PagI TCATGA 1 cut(s) 1327
PciSI GCTCTTC 1 cut(s) 1353
PcsI WCGNNNNNNNCGW 2 cut(s) 296, 1188
PdmI GAANNNNTTC 2 cut(s) 583, 1347
PfeI GAWTC 4 cut(s) 584, 812, 1035, 1313
PinAI ACCGGT 1 cut(s) 1140
PkrI GCNGC 1 cut(s) 239
PleI GAGTC 1 cut(s) 1169
PpsI GAGTC 1 cut(s) 1169
Ppu21I YACGTR 1 cut(s) 1200
PshBI ATTAAT 1 cut(s) 213
Psp6I CCWGG 1 cut(s) 337
PspGI CCWGG 1 cut(s) 337
PspN4I GGNNCC 3 cut(s) 32, 208, 627
PspPI GGNCC 3 cut(s) 65, 229, 956
PsuI RGATCY 3 cut(s) 184, 513, 1150
RruI TCGCGA 1 cut(s) 1311
RsaI GTAC 3 cut(s) 893, 899, 1214
RsaNI GTAC 3 cut(s) 892, 898, 1213
RseI CAYNNNNRTG 4 cut(s) 612, 692, 729, 842
SapI GCTCTTC 1 cut(s) 1353
SaqAI TTAA 6 cut(s) 213, 366, 392, 411, 573, 728
SatI GCNGC 1 cut(s) 238
Sau3AI GATC 7 cut(s) 35, 54, 184, 513, 631, 1150, 1324
Sau96I GGNCC 3 cut(s) 65, 229, 956
SchI GAGTC 1 cut(s) 1170
ScrFI CCNGG 2 cut(s) 339, 889
SfaNI GCATC 2 cut(s) 32, 511
SfuI TTCGAA 1 cut(s) 966
SinI GGWCC 3 cut(s) 65, 229, 956
SmiMI CAYNNNNRTG 4 cut(s) 612, 692, 729, 842
SmlI CTYRAG 4 cut(s) 253, 365, 914, 1298
SmoI CTYRAG 4 cut(s) 253, 365, 914, 1298
Sse9I AATT 5 cut(s) 488, 603, 873, 1282, 1375
SsiI CCGC 3 cut(s) 71, 1217, 1235
SspMI CTAG 2 cut(s) 558, 1154
StyD4I CCNGG 2 cut(s) 337, 887
TaiI ACGT 4 cut(s) 11, 144, 174, 1202
TaqI TCGA 1 cut(s) 966
TasI AATT 5 cut(s) 488, 603, 873, 1282, 1375
TfiI GAWTC 4 cut(s) 584, 812, 1035, 1313
Tru1I TTAA 6 cut(s) 213, 366, 392, 411, 573, 728
Tru9I TTAA 6 cut(s) 213, 366, 392, 411, 573, 728
TseI GCWGC 1 cut(s) 237
TspDTI ATGAA 3 cut(s) 596, 713, 1344
TspGWI ACGGA 1 cut(s) 288
Vha464I CTTAAG 1 cut(s) 365
VpaK11BI GGWCC 3 cut(s) 65, 229, 956
VspI ATTAAT 1 cut(s) 213
XapI RAATTY 2 cut(s) 488, 603
XmiI GTMKAC 1 cut(s) 1128
XmnI GAANNNNTTC 2 cut(s) 583, 1347
XspI CTAG 2 cut(s) 558, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.