Prupe.5G199900_v2.0.a1

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0011359
Physical Location & Seq
Reverse (-)
16083742 .. 16086702
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G199900.1

Sequence Viewer

Length: 1395 bp
ATGGTTTCTGAGACTTACCAATCCAAAAAAGTTTGTGTAATTGGAGCTGGACCCTCAGGGCTTGTAGCTGCAAGGGAGTTGAGGAAAGAAGGTCACAGAGTGGTGGTTCTGGAACAAAACCATGATGTAGGAGGGCAATGGCTGTATGACCCTAATGTGGAGGGAGAGGATCCCTTAGGAAGGAGACCTTCTCTAAAAGTGCATAGCAGTCTTTACACCTCTTTAAGGCTCATATCTCCCAGAGAGATCATGGGCTTCACTGACTTTCCATTCTCAGTGAAGAAGGGTAGGGACATGAGAAGGTTTCCTGGCCATAGGGAACTTCTTTTGTATCTTAAGGATTTCTGTGACTGGTTTGGATTAAGGGATTTGATAAGGTTCAATACTAGGGTGGCATATGTGGGGATGTTGGATTATTATGCTACTAGTACTGATGATGTAGTTGGCTGCGAAGATTTGAAATGGGTTGTTAGGAGTGTAGATAAGAAGACTCAGATTGTCATGGAAGAGGTGTTTGATGCTGTGATTGTGGCCACTGGCCATTACTCTCAGCCAAGGCTGCCTTCCATTAAAGGAATGGATGCATGGAAGAGGAAGCAAATGCATAGTCACATCTACAGGGTTCCTGAGCCGTTTGCCGATGAGGTTGTGGTGGTGGTTGGAACTTCACTAAGTGGACAAGATATATCAATGGAACTAGTGGAAGAGGCAAAGGCAGTCTACCTCAGTGGCAAATCTCTTGACATATCTGAGGGCTTGTCCAAAGTCATTTCCAAGCATGAGAACTTGCACCTTCGTCCGCAGATAGACTGCCTTCAAGAAGATGGGAAGGTATTATTTGTGGATGGTTCTTGGGTCATTGCAGACACCATCATGTACTGCACTGGGTATTCATACACATTCCCCTTTCTTGACACCAAAGGAATAGTAGCTGTGGATGATGACAGAGTGGGCCCTTTGTATGAGCACACCTTCCCTCCATCACTTGCTCCCTCTTTATCTTTTATAGGCATTCCTAGAAAGATCATAGGGTTCCCATTCTTTGAGTCACAAGCAAAATGGATAGCTCAACTACTCTCTGGGAAAAGAACATTGCCATCAAGGGATGACATGATGCAGTCCATTAAGGAACTCTATCACTCAAGGGATGTTGCTGGCATTCCAAAGCATAATACCCATGATATCGCAGAGTTCGAGTATTGTGATAGATATGGAGATCATATTGGGTTCCCACGTTTAGAAGAATGGAGGAAAGAGCTTTGCCTTTCGGCCCTGAGAAATGCTGACACCGACTTAGAAACATATAGGGATTCGTGGGATGATCATGAGCTGCTTCAAGAGGCTCTTCAAAGTCCACATTTCACTCAACATGGGGCTCAAGATTTTCCTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like K_oxygenase

Protein Analysis

465

Amino Acids

52.9

Weight (kDa)

5.67

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07800
fragaria_vesca FvH4_5g14390
malus_domestica MD06G1199100.v1.1 MD14G1206500.v1.1 MD14G1206800.v1.1 MD14G1207200.v1.1
prunus_persica Prupe.5G199900_v2.0.a1
pyrus_communis pycom14g17100 pycom14g17110 pycom14g17120
rosa_chinensis RchiOBHm_Chr7g0182301
rosa_laevigata RLG00000005134
rosa_multiflora Rmu_sc0000003.1_g000007
rosa_roxburghii Rroxscaffold_3G00271340
rosa_rugosa Rorug06G0446900
rosa_samantha Rh7AG049800 Rh7BG049900 Rh7CG051200 Rh7DG049100
rosa_wichuraiana Rw7G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 720
AciI CCGC 1 cut(s) 800
AclWI GGATC 2 cut(s) 164, 177
AcoI YGGCCR 3 cut(s) 310, 531, 538
AdeI CACNNNGTG 2 cut(s) 100, 674
AfaI GTAC 2 cut(s) 430, 878
AfiI CCNNNNNNNGG 3 cut(s) 157, 180, 225
AflII CTTAAG 1 cut(s) 335
AgsI TTSAA 5 cut(s) 382, 460, 818, 1337, 1349
AhlI ACTAGT 2 cut(s) 425, 697
AjnI CCWGG 1 cut(s) 307
AjuI GAANNNNNNNTTGG 2 cut(s) 547, 579
AluBI AGCT 6 cut(s) 47, 68, 932, 1067, 1258, 1330
AluI AGCT 6 cut(s) 47, 68, 932, 1067, 1258, 1330
Alw21I GWGCWC 1 cut(s) 969
Alw26I GTCTC 2 cut(s) 5, 178
AlwI GGATC 2 cut(s) 164, 177
AoxI GGCC 5 cut(s) 310, 531, 538, 952, 1269
ApaI GGGCCC 1 cut(s) 956
ApeKI GCWGC 4 cut(s) 68, 447, 559, 1330
ArsI GACNNNNNNTTYG 2 cut(s) 592, 624
AspS9I GGNCC 4 cut(s) 50, 952, 953, 1270
AvaII GGWCC 1 cut(s) 50
AxyI CCTNAGG 2 cut(s) 55, 175
BaeGI GKGCMC 1 cut(s) 956
BalI TGGCCA 3 cut(s) 312, 533, 540
BamHI GGATCC 1 cut(s) 169
BanII GRGCYC 2 cut(s) 956, 1378
BbsI GAAGAC 1 cut(s) 494
Bbv12I GWGCWC 1 cut(s) 969
BbvI GCAGC 4 cut(s) 55, 434, 546, 1317
BccI CCATC 5 cut(s) 818, 839, 878, 988, 1105
BceAI ACGGC 1 cut(s) 616
BciT130I CCWGG 1 cut(s) 309
BclI TGATCA 1 cut(s) 1321
BcoDI GTCTC 2 cut(s) 5, 178
BcuI ACTAGT 2 cut(s) 425, 697
BfaI CTAG 4 cut(s) 387, 426, 698, 1017
BfmI CTRYAG 1 cut(s) 616
BfrI CTTAAG 1 cut(s) 335
BisI GCNGC 4 cut(s) 69, 448, 560, 1331
BlsI GCNGC 4 cut(s) 70, 449, 561, 1332
BmcAI AGTACT 1 cut(s) 430
Bme1390I CCNGG 1 cut(s) 309
Bme18I GGWCC 1 cut(s) 50
BmgT120I GGNCC 4 cut(s) 50, 952, 953, 1270
BmiI GGNNCC 6 cut(s) 52, 171, 624, 954, 1034, 1229
BmrFI CCNGG 1 cut(s) 309
BmrI ACTGGG 1 cut(s) 894
BmsI GCATC 3 cut(s) 508, 571, 1104
BmuI ACTGGG 1 cut(s) 894
BpiI GAAGAC 1 cut(s) 494
BplI GAGNNNNNCTC 2 cut(s) 175, 207
Bpu10I CCTNAGC 1 cut(s) 627
BpuEI CTTGAG 2 cut(s) 1126, 1362
BsaI GGTCTC 1 cut(s) 178
BsaJI CCNNGG 1 cut(s) 554
BsaXI ACNNNNNCTCC 2 cut(s) 961, 991
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 180, 225
Bse1I ACTGG 3 cut(s) 356, 541, 889
Bse21I CCTNAGG 2 cut(s) 55, 175
Bse3DI GCAATG 3 cut(s) 143, 858, 1091
BseBI CCWGG 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 554
BseGI GGATG 7 cut(s) 411, 586, 850, 943, 1111, 1153, 1324
BseLI CCNNNNNNNGG 3 cut(s) 157, 180, 225
BseMI GCAATG 3 cut(s) 143, 858, 1091
BseMII CTCAG 8 cut(s) 69, 288, 506, 563, 618, 739, 741, 1265
BseNI ACTGG 3 cut(s) 356, 541, 889
BseSI GKGCMC 1 cut(s) 956
BseXI GCAGC 4 cut(s) 55, 434, 546, 1317
BsgI GTGCAG 1 cut(s) 865
BshFI GGCC 5 cut(s) 312, 533, 540, 954, 1271
BsiHKAI GWGCWC 1 cut(s) 969
BslFI GGGAC 1 cut(s) 305
BslI CCNNNNNNNGG 3 cut(s) 157, 180, 225
BsmAI GTCTC 2 cut(s) 5, 178
BsmFI GGGAC 1 cut(s) 305
BsmI GAATGC 2 cut(s) 1011, 1158
BsnI GGCC 5 cut(s) 312, 533, 540, 954, 1271
Bso31I GGTCTC 1 cut(s) 178
Bsp120I GGGCCC 1 cut(s) 952
Bsp1286I GDGCHC 3 cut(s) 956, 969, 1378
Bsp143I GATC 5 cut(s) 169, 246, 1023, 1216, 1321
BspACI CCGC 1 cut(s) 800
BspANI GGCC 5 cut(s) 312, 533, 540, 954, 1271
BspCNI CTCAG 8 cut(s) 68, 287, 505, 562, 619, 738, 742, 1266
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 6 cut(s) 52, 171, 624, 954, 1034, 1229
BspPI GGATC 2 cut(s) 164, 177
BspQI GCTCTTC 1 cut(s) 1350
BspTI CTTAAG 1 cut(s) 335
BspTNI GGTCTC 1 cut(s) 178
BsrDI GCAATG 3 cut(s) 143, 858, 1091
BsrI ACTGG 3 cut(s) 356, 541, 889
BssECI CCNNGG 1 cut(s) 554
BssMI GATC 5 cut(s) 169, 246, 1023, 1216, 1321
BssT1I CCWWGG 1 cut(s) 554
Bst2UI CCWGG 1 cut(s) 309
Bst6I CTCTTC 4 cut(s) 501, 584, 699, 1350
BstAFI CTTAAG 1 cut(s) 335
BstC8I GCNNGC 1 cut(s) 1156
BstENI CCTNNNNNAGG 2 cut(s) 178, 223
BstF5I GGATG 7 cut(s) 411, 586, 850, 943, 1111, 1153, 1324
BstKTI GATC 5 cut(s) 172, 249, 1026, 1219, 1324
BstMAI GTCTC 2 cut(s) 5, 178
BstMBI GATC 5 cut(s) 169, 246, 1023, 1216, 1321
BstMWI GCNNNNNNNGC 1 cut(s) 559
BstNI CCWGG 1 cut(s) 309
BstSCI CCNGG 1 cut(s) 307
BstSFI CTRYAG 1 cut(s) 616
BstSLI GKGCMC 1 cut(s) 956
BstV1I GCAGC 4 cut(s) 55, 434, 546, 1317
BstV2I GAAGAC 1 cut(s) 494
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
Bsu36I CCTNAGG 2 cut(s) 55, 175
BsuRI GGCC 5 cut(s) 312, 533, 540, 954, 1271
BtsCI GGATG 7 cut(s) 411, 586, 850, 943, 1111, 1153, 1324
BtsIMutI CAGTG 5 cut(s) 258, 282, 534, 733, 882
Cac8I GCNNGC 1 cut(s) 1156
CciI TCATGA 1 cut(s) 1324
Cfr13I GGNCC 4 cut(s) 50, 952, 953, 1270
Csp6I GTAC 2 cut(s) 429, 877
CviQI GTAC 2 cut(s) 429, 877
DpnI GATC 5 cut(s) 171, 248, 1025, 1218, 1323
DpnII GATC 5 cut(s) 169, 246, 1023, 1216, 1321
DraIII CACNNNGTG 2 cut(s) 100, 674
EaeI YGGCCR 3 cut(s) 310, 531, 538
Eam1104I CTCTTC 4 cut(s) 501, 584, 699, 1350
EarI CTCTTC 4 cut(s) 501, 584, 699, 1350
Eco130I CCWWGG 1 cut(s) 554
Eco24I GRGCYC 2 cut(s) 956, 1378
Eco31I GGTCTC 1 cut(s) 178
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 1 cut(s) 50
Eco81I CCTNAGG 2 cut(s) 55, 175
EcoNI CCTNNNNNAGG 2 cut(s) 178, 223
EcoO109I RGGNCCY 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 307
EcoRV GATATC 1 cut(s) 1183
EcoT14I CCWWGG 1 cut(s) 554
EcoT22I ATGCAT 2 cut(s) 586, 606
EcoT38I GRGCYC 2 cut(s) 956, 1378
ErhI CCWWGG 1 cut(s) 554
FalI AAGNNNNNCTT 6 cut(s) 172, 204, 547, 579, 1329, 1361
FaqI GGGAC 1 cut(s) 305
FauNDI CATATG 1 cut(s) 397
FbaI TGATCA 1 cut(s) 1321
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 4 cut(s) 69, 448, 560, 1331
FokI GGATG 7 cut(s) 418, 593, 857, 950, 1118, 1160, 1331
FriOI GRGCYC 2 cut(s) 956, 1378
Fsp4HI GCNGC 4 cut(s) 69, 448, 560, 1331
FspBI CTAG 4 cut(s) 387, 426, 698, 1017
GluI GCNGC 4 cut(s) 69, 448, 560, 1331
HaeIII GGCC 5 cut(s) 312, 533, 540, 954, 1271
HinfI GANTC 3 cut(s) 490, 1046, 1310
Hpy166II GTNNAC 3 cut(s) 677, 721, 1355
Hpy188I TCNGA 3 cut(s) 10, 495, 751
Hpy188III TCNNGA 8 cut(s) 110, 626, 740, 818, 911, 1325, 1337, 1379
Hpy8I GTNNAC 3 cut(s) 677, 721, 1355
HpyCH4IV ACGT 1 cut(s) 1234
HpyCH4V TGCA 8 cut(s) 71, 202, 584, 604, 790, 863, 882, 1117
HpyF10VI GCNNNNNNNGC 1 cut(s) 559
HpySE526I ACGT 1 cut(s) 1234
Ksp22I TGATCA 1 cut(s) 1321
Kzo9I GATC 5 cut(s) 169, 246, 1023, 1216, 1321
LguI GCTCTTC 1 cut(s) 1350
LmnI GCTCC 2 cut(s) 44, 994
Lsp1109I GCAGC 4 cut(s) 55, 434, 546, 1317
LweI GCATC 3 cut(s) 508, 571, 1104
MaeI CTAG 4 cut(s) 387, 426, 698, 1017
MaeII ACGT 1 cut(s) 1234
MaeIII GTNAC 4 cut(s) 92, 347, 608, 1047
MalI GATC 5 cut(s) 171, 248, 1025, 1218, 1323
MboI GATC 5 cut(s) 169, 246, 1023, 1216, 1321
MboII GAAGA 9 cut(s) 292, 464, 499, 518, 601, 716, 833, 1253, 1337
MflI RGATCY 1 cut(s) 169
MhlI GDGCHC 3 cut(s) 956, 969, 1378
MlsI TGGCCA 3 cut(s) 312, 533, 540
MluCI AATT 1 cut(s) 39
MluNI TGGCCA 3 cut(s) 312, 533, 540
MlyI GAGTC 2 cut(s) 484, 1055
MmeI TCCRAC 2 cut(s) 390, 640
Mox20I TGGCCA 3 cut(s) 312, 533, 540
Mph1103I ATGCAT 2 cut(s) 586, 606
MscI TGGCCA 3 cut(s) 312, 533, 540
MseI TTAA 5 cut(s) 224, 336, 362, 570, 1125
MslI CAYNNNNRTG 1 cut(s) 872
Msp20I TGGCCA 3 cut(s) 312, 533, 540
MspCI CTTAAG 1 cut(s) 335
MspR9I CCNGG 1 cut(s) 309
Mva1269I GAATGC 2 cut(s) 1011, 1158
MvaI CCWGG 1 cut(s) 309
MwoI GCNNNNNNNGC 1 cut(s) 559
NdeI CATATG 1 cut(s) 397
NdeII GATC 5 cut(s) 169, 246, 1023, 1216, 1321
NlaIV GGNNCC 6 cut(s) 52, 171, 624, 954, 1034, 1229
NmuCI GTSAC 4 cut(s) 92, 347, 608, 1047
NsiI ATGCAT 2 cut(s) 586, 606
PagI TCATGA 1 cut(s) 1324
PciSI GCTCTTC 1 cut(s) 1350
PcsI WCGNNNNNNNCGW 1 cut(s) 1191
PctI GAATGC 2 cut(s) 1011, 1158
PfeI GAWTC 1 cut(s) 1310
PkrI GCNGC 4 cut(s) 70, 449, 561, 1332
PleI GAGTC 2 cut(s) 484, 1054
PpsI GAGTC 2 cut(s) 484, 1054
Psp6I CCWGG 1 cut(s) 307
PspGI CCWGG 1 cut(s) 307
PspN4I GGNNCC 6 cut(s) 52, 171, 624, 954, 1034, 1229
PspOMI GGGCCC 1 cut(s) 952
PspPI GGNCC 4 cut(s) 50, 952, 953, 1270
PsuI RGATCY 1 cut(s) 169
RsaI GTAC 2 cut(s) 430, 878
RsaNI GTAC 2 cut(s) 429, 877
RseI CAYNNNNRTG 1 cut(s) 872
SapI GCTCTTC 1 cut(s) 1350
SaqAI TTAA 5 cut(s) 224, 336, 362, 570, 1125
SatI GCNGC 4 cut(s) 69, 448, 560, 1331
Sau3AI GATC 5 cut(s) 169, 246, 1023, 1216, 1321
Sau96I GGNCC 4 cut(s) 50, 952, 953, 1270
ScaI AGTACT 1 cut(s) 430
SchI GAGTC 2 cut(s) 484, 1055
ScrFI CCNGG 1 cut(s) 309
SduI GDGCHC 3 cut(s) 956, 969, 1378
SfaNI GCATC 3 cut(s) 508, 571, 1104
SfcI CTRYAG 1 cut(s) 616
SinI GGWCC 1 cut(s) 50
SmiMI CAYNNNNRTG 1 cut(s) 872
SmlI CTYRAG 3 cut(s) 335, 1141, 1377
SmoI CTYRAG 3 cut(s) 335, 1141, 1377
SpeI ACTAGT 2 cut(s) 425, 697
Sse9I AATT 1 cut(s) 39
SsiI CCGC 1 cut(s) 800
SspMI CTAG 4 cut(s) 387, 426, 698, 1017
StyD4I CCNGG 1 cut(s) 307
StyI CCWWGG 1 cut(s) 554
TaiI ACGT 1 cut(s) 1237
TaqI TCGA 1 cut(s) 1194
TasI AATT 1 cut(s) 39
TatI WGTACW 2 cut(s) 428, 876
TfiI GAWTC 1 cut(s) 1310
Tru1I TTAA 5 cut(s) 224, 336, 362, 570, 1125
Tru9I TTAA 5 cut(s) 224, 336, 362, 570, 1125
TscAI CASTG 5 cut(s) 265, 282, 541, 733, 889
TseFI GTSAC 4 cut(s) 92, 347, 608, 1047
TseI GCWGC 4 cut(s) 68, 447, 559, 1330
Tsp45I GTSAC 4 cut(s) 92, 347, 608, 1047
TspDTI ATGAA 1 cut(s) 882
TspRI CASTG 5 cut(s) 265, 282, 541, 733, 889
Vha464I CTTAAG 1 cut(s) 335
VpaK11BI GGWCC 1 cut(s) 50
XagI CCTNNNNNAGG 2 cut(s) 178, 223
XcmI CCANNNNNNNNNTGG 2 cut(s) 247, 574
XmiI GTMKAC 1 cut(s) 720
XspI CTAG 4 cut(s) 387, 426, 698, 1017
ZrmI AGTACT 1 cut(s) 430
Zsp2I ATGCAT 2 cut(s) 586, 606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.