pycom14g17120

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0011359
Physical Location & Seq
Reverse (-)
19191812 .. 19195020
3209 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g17120.3

Sequence Viewer

Length: 1386 bp
ATGGCTTCTGAAATTTACCAATCCAAAAATGTATGCGTGATTGGAGCTGGACCCTCAGGACTTGTAGCTGCAAGGGAGCTGAGGAACGAAGGTCACAGGGTGGTGGTGCTGGAACAAAACCATGATGTGGGAGGGCAGTGGCTGTACGACCCAAATGTGGAGGGAGAGGATCCCTTAGGAAGGGCACCTACCCTGAAAGTGCATAGCAGTCTTTACACGTCTTTGAGGCTCATGCTTCCAAGAGAGATCGCGGGGTTCACTGACTTTCCATTTGCAGTCAAGAAAGGTAGGGACATGAGGAGGTTTCCTGGCCATACGGAGCTTCTTTTCTACCTCAAGGATTTTTGTGATTGGTTTGGGTTGAGGGAGTTGATAAGGTTCAATACGAGGGTTTCATATGTGGGGATGTTGGATGGAGATGCAGTTGGTTGCAAAGATTTGAAATGGGTTGTGAGGAGTGTGGAGAAGAAGACCGAGATTTTCGTGGAGGAGGTGTTTGATGCGGTGGTTGTGGCCTCCGGCCATTACTCTAAGCCAAGGTTGCCGTCCATTAAAGGAATGGATGCATGGAAGAGGAAGCAAATGCATAGTCACATCTACAGGGTTCCGGAGCCATTTTGTGATGAGGTTGTGGTGGTGGTTGGAAATTCAATAAGCGGACAAGATATATCAATGGAACTAATGGATGTGGCCAAGGCAATCTATCTCAGTGCCAAATCTCTTGACATATCTGAGGGCTTGTCCAAAGTCATTTCCAAACACGAAAACTTGCACCTTCGTCCCCAGATAGAGTCACTTCAAGAAGATGGGAATGTATTATTTGTGAACGGTTCTTGGGTCATTGCAGACACTATCATATACTGTACTGGGTATTCATACGCATTCCCCTTTCTTGACACCAAAGGAATAGTTGCCATAGATGATAACAGAGTGGGCCCTCTGTATGAGCACACCTTCCCTCCATCACTTGCACCCTCTTTATCCTTTATAGGCATTGCAACAAAGATCATAGGGTTCCCTTTCTTTGAGTCACAAGCAAAATGGATAGCTCAACTACTCTCTGGCAAAACATCATTGCCATCAAGGGATGATATGATGCATTCCATCAAGGAGTTCTACCACTCAAAGGAGATTGCTGGCATTCCAAAGCATAACACCCACGAGATCGGCAACTTCGAGTATTGTGACAGATATGGGGATCACATAGGATTCCCACGTTTGGAAGAATGGAGGAAAAAGATTTGCCTTTCGGCAATAAGAAATGCTGAGACTGACTTAGAAACATACAAGGATTCGTGGGACGATCATGAGCTAATTCAAGAGGCTCTTCAAAGTCCACATTTCACTCAACTTGGGCCTCAAGATTTAGATTTTCCTCTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like K_oxygenase

Protein Analysis

462

Amino Acids

52.18

Weight (kDa)

5.73

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G07800
fragaria_vesca FvH4_5g14390
malus_domestica MD06G1199100.v1.1 MD14G1206500.v1.1 MD14G1206800.v1.1 MD14G1207200.v1.1
prunus_persica Prupe.5G199900_v2.0.a1
pyrus_communis pycom14g17100 pycom14g17110 pycom14g17120
rosa_chinensis RchiOBHm_Chr7g0182301
rosa_laevigata RLG00000005134
rosa_multiflora Rmu_sc0000003.1_g000007
rosa_roxburghii Rroxscaffold_3G00271340
rosa_rugosa Rorug06G0446900
rosa_samantha Rh7AG049800 Rh7BG049900 Rh7CG051200 Rh7DG049100
rosa_wichuraiana Rw7G004090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 184
AccB7I CCANNNNNTGG 1 cut(s) 127
AccII CGCG 1 cut(s) 251
AccIII TCCGGA 1 cut(s) 607
AciI CCGC 3 cut(s) 251, 503, 657
AclWI GGATC 3 cut(s) 164, 177, 1206
AcoI YGGCCR 3 cut(s) 310, 520, 690
AcsI RAATTY 2 cut(s) 12, 646
AdeI CACNNNGTG 1 cut(s) 100
AfaI GTAC 2 cut(s) 146, 865
AfiI CCNNNNNNNGG 5 cut(s) 127, 157, 180, 1126, 1219
AflIII ACRYGT 1 cut(s) 216
AgsI TTSAA 6 cut(s) 382, 442, 651, 800, 1319, 1331
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 1 cut(s) 307
AluBI AGCT 6 cut(s) 47, 68, 79, 322, 1049, 1312
AluI AGCT 6 cut(s) 47, 68, 79, 322, 1049, 1312
Alw21I GWGCWC 1 cut(s) 951
Alw26I GTCTC 1 cut(s) 1262
AlwI GGATC 3 cut(s) 164, 177, 1206
AlwNI CAGNNNCTG 1 cut(s) 142
Aor13HI TCCGGA 1 cut(s) 607
AoxI GGCC 6 cut(s) 310, 513, 520, 690, 934, 1355
ApaI GGGCCC 1 cut(s) 938
ApeKI GCWGC 1 cut(s) 68
ApoI RAATTY 2 cut(s) 12, 646
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 574, 606
AspS9I GGNCC 4 cut(s) 50, 934, 935, 1355
AvaII GGWCC 1 cut(s) 50
AxyI CCTNAGG 2 cut(s) 55, 175
BaeGI GKGCMC 2 cut(s) 187, 938
BalI TGGCCA 2 cut(s) 312, 692
BamHI GGATCC 1 cut(s) 169
BanI GGYRCC 1 cut(s) 184
BanII GRGCYC 1 cut(s) 938
BarI GAAGNNNNNNTAC 2 cut(s) 172, 204
BauI CACGAG 1 cut(s) 1160
BbsI GAAGAC 1 cut(s) 476
Bbv12I GWGCWC 1 cut(s) 951
BbvCI CCTCAGC 1 cut(s) 80
BbvI GCAGC 1 cut(s) 55
BccI CCATC 5 cut(s) 407, 800, 970, 1087, 1112
BceAI ACGGC 1 cut(s) 529
BciT130I CCWGG 1 cut(s) 309
BcoDI GTCTC 1 cut(s) 1262
BfmI CTRYAG 1 cut(s) 598
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
Bme1390I CCNGG 1 cut(s) 309
Bme18I GGWCC 1 cut(s) 50
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 50, 934, 935, 1355
BmiI GGNNCC 7 cut(s) 52, 171, 186, 606, 612, 936, 1016
BmrFI CCNGG 1 cut(s) 309
BmrI ACTGGG 1 cut(s) 876
BmsI GCATC 4 cut(s) 409, 490, 553, 1086
BmuI ACTGGG 1 cut(s) 876
BpiI GAAGAC 1 cut(s) 476
Bpu10I CCTNAGC 1 cut(s) 80
BpuEI CTTGAG 2 cut(s) 320, 1344
BsaJI CCNNGG 2 cut(s) 536, 693
BsaWI WCCGGW 1 cut(s) 607
BsaXI ACNNNNNCTCC 6 cut(s) 408, 438, 479, 509, 943, 973
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 157, 180, 1126, 1219
Bse1I ACTGG 1 cut(s) 871
Bse21I CCTNAGG 2 cut(s) 55, 175
Bse3DI GCAATG 3 cut(s) 840, 993, 1073
BseAI TCCGGA 1 cut(s) 607
BseBI CCWGG 1 cut(s) 309
BseDI CCNNGG 2 cut(s) 536, 693
BseGI GGATG 5 cut(s) 411, 418, 568, 691, 1093
BseLI CCNNNNNNNGG 5 cut(s) 127, 157, 180, 1126, 1219
BseMI GCAATG 3 cut(s) 840, 993, 1073
BseMII CTCAG 5 cut(s) 69, 71, 721, 723, 1257
BseNI ACTGG 1 cut(s) 871
BseRI GAGGAG 3 cut(s) 313, 469, 503
BseSI GKGCMC 2 cut(s) 187, 938
BseXI GCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 251
BshFI GGCC 6 cut(s) 312, 515, 522, 692, 936, 1357
BshNI GGYRCC 1 cut(s) 184
BsiHKAI GWGCWC 1 cut(s) 951
BsiSI CCGG 2 cut(s) 519, 608
BslFI GGGAC 3 cut(s) 305, 765, 1313
BslI CCNNNNNNNGG 5 cut(s) 127, 157, 180, 1126, 1219
BsmAI GTCTC 1 cut(s) 1262
BsmFI GGGAC 3 cut(s) 305, 765, 1313
BsmI GAATGC 3 cut(s) 881, 1099, 1140
BsnI GGCC 6 cut(s) 312, 515, 522, 692, 936, 1357
Bsp120I GGGCCC 1 cut(s) 934
Bsp1286I GDGCHC 3 cut(s) 187, 938, 951
Bsp13I TCCGGA 1 cut(s) 607
Bsp143I GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
BspACI CCGC 3 cut(s) 251, 503, 657
BspANI GGCC 6 cut(s) 312, 515, 522, 692, 936, 1357
BspCNI CTCAG 5 cut(s) 68, 72, 720, 724, 1258
BspEI TCCGGA 1 cut(s) 607
BspFNI CGCG 1 cut(s) 251
BspHI TCATGA 1 cut(s) 1306
BspLI GGNNCC 7 cut(s) 52, 171, 186, 606, 612, 936, 1016
BspPI GGATC 3 cut(s) 164, 177, 1206
BspQI GCTCTTC 1 cut(s) 1332
BspT107I GGYRCC 1 cut(s) 184
BsrDI GCAATG 3 cut(s) 840, 993, 1073
BsrI ACTGG 1 cut(s) 871
BssECI CCNNGG 2 cut(s) 536, 693
BssMI GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
BssSI CACGAG 1 cut(s) 1160
BssT1I CCWWGG 2 cut(s) 536, 693
Bst2BI CACGAG 1 cut(s) 1160
Bst2UI CCWGG 1 cut(s) 309
Bst4CI ACNGT 2 cut(s) 830, 863
Bst6I CTCTTC 2 cut(s) 566, 1332
BstC8I GCNNGC 1 cut(s) 1138
BstDEI CTNAG 8 cut(s) 55, 80, 175, 531, 707, 732, 1266, 1276
BstENI CCTNNNNNAGG 1 cut(s) 178
BstF5I GGATG 5 cut(s) 411, 418, 568, 691, 1093
BstFNI CGCG 1 cut(s) 251
BstKTI GATC 6 cut(s) 172, 249, 1008, 1167, 1201, 1306
BstMAI GTCTC 1 cut(s) 1262
BstMBI GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
BstMWI GCNNNNNNNGC 1 cut(s) 541
BstNI CCWGG 1 cut(s) 309
BstSCI CCNGG 1 cut(s) 307
BstSFI CTRYAG 1 cut(s) 598
BstSLI GKGCMC 2 cut(s) 187, 938
BstUI CGCG 1 cut(s) 251
BstV1I GCAGC 1 cut(s) 55
BstV2I GAAGAC 1 cut(s) 476
BstX2I RGATCY 1 cut(s) 169
BstYI RGATCY 1 cut(s) 169
Bsu36I CCTNAGG 2 cut(s) 55, 175
BsuRI GGCC 6 cut(s) 312, 515, 522, 692, 936, 1357
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 5 cut(s) 411, 418, 568, 691, 1093
BtsI GCAGTG 1 cut(s) 143
BtsIMutI CAGTG 3 cut(s) 143, 258, 715
Cac8I GCNNGC 1 cut(s) 1138
CaiI CAGNNNCTG 1 cut(s) 142
CciI TCATGA 1 cut(s) 1306
Cfr13I GGNCC 4 cut(s) 50, 934, 935, 1355
Csp6I GTAC 2 cut(s) 145, 864
CviAII CATG 5 cut(s) 122, 232, 295, 567, 1307
CviQI GTAC 2 cut(s) 145, 864
DdeI CTNAG 8 cut(s) 55, 80, 175, 531, 707, 732, 1266, 1276
DpnI GATC 6 cut(s) 171, 248, 1007, 1166, 1200, 1305
DpnII GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
DraIII CACNNNGTG 1 cut(s) 100
EaeI YGGCCR 3 cut(s) 310, 520, 690
Eam1104I CTCTTC 2 cut(s) 566, 1332
EarI CTCTTC 2 cut(s) 566, 1332
Eco130I CCWWGG 2 cut(s) 536, 693
Eco24I GRGCYC 1 cut(s) 938
Eco47I GGWCC 1 cut(s) 50
Eco81I CCTNAGG 2 cut(s) 55, 175
EcoNI CCTNNNNNAGG 1 cut(s) 178
EcoO109I RGGNCCY 1 cut(s) 935
EcoRII CCWGG 1 cut(s) 307
EcoT14I CCWWGG 2 cut(s) 536, 693
EcoT22I ATGCAT 3 cut(s) 568, 588, 1101
EcoT38I GRGCYC 1 cut(s) 938
ErhI CCWWGG 2 cut(s) 536, 693
FaeI CATG 5 cut(s) 125, 235, 298, 570, 1310
FalI AAGNNNNNCTT 2 cut(s) 1311, 1343
FaqI GGGAC 3 cut(s) 305, 765, 1313
FatI CATG 5 cut(s) 121, 231, 294, 566, 1306
FauI CCCGC 1 cut(s) 244
FauNDI CATATG 1 cut(s) 397
Fnu4HI GCNGC 1 cut(s) 69
FokI GGATG 5 cut(s) 418, 425, 575, 698, 1100
FriOI GRGCYC 1 cut(s) 938
Fsp4HI GCNGC 1 cut(s) 69
GluI GCNGC 1 cut(s) 69
HaeIII GGCC 6 cut(s) 312, 515, 522, 692, 936, 1357
HapII CCGG 2 cut(s) 519, 608
Hin1II CATG 5 cut(s) 125, 235, 298, 570, 1310
HinfI GANTC 4 cut(s) 791, 1028, 1209, 1292
HpaII CCGG 2 cut(s) 519, 608
Hpy166II GTNNAC 3 cut(s) 258, 826, 1337
Hpy188I TCNGA 2 cut(s) 10, 733
Hpy188III TCNNGA 9 cut(s) 57, 280, 608, 722, 800, 893, 1307, 1319, 1361
Hpy8I GTNNAC 3 cut(s) 258, 826, 1337
HpyAV CCTTC 4 cut(s) 83, 174, 785, 964
HpyCH4III ACNGT 2 cut(s) 830, 863
HpyCH4IV ACGT 2 cut(s) 218, 1216
HpyF10VI GCNNNNNNNGC 1 cut(s) 541
HpyF3I CTNAG 8 cut(s) 55, 80, 175, 531, 707, 732, 1266, 1276
HpySE526I ACGT 2 cut(s) 218, 1216
Hsp92II CATG 5 cut(s) 125, 235, 298, 570, 1310
Kpn2I TCCGGA 1 cut(s) 607
Kzo9I GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
LguI GCTCTTC 1 cut(s) 1332
LmnI GCTCC 4 cut(s) 44, 76, 319, 610
Lsp1109I GCAGC 1 cut(s) 55
LweI GCATC 4 cut(s) 409, 490, 553, 1086
MaeII ACGT 2 cut(s) 218, 1216
MaeIII GTNAC 5 cut(s) 92, 590, 792, 1029, 1184
MalI GATC 6 cut(s) 171, 248, 1007, 1166, 1200, 1305
MboI GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
MboII GAAGA 6 cut(s) 478, 481, 583, 815, 1235, 1319
MflI RGATCY 1 cut(s) 169
MhlI GDGCHC 3 cut(s) 187, 938, 951
MlsI TGGCCA 2 cut(s) 312, 692
MluCI AATT 3 cut(s) 12, 646, 1314
MluNI TGGCCA 2 cut(s) 312, 692
MlyI GAGTC 2 cut(s) 800, 1037
MmeI TCCRAC 2 cut(s) 390, 622
Mox20I TGGCCA 2 cut(s) 312, 692
Mph1103I ATGCAT 3 cut(s) 568, 588, 1101
MroI TCCGGA 1 cut(s) 607
MscI TGGCCA 2 cut(s) 312, 692
MseI TTAA 1 cut(s) 552
Msp20I TGGCCA 2 cut(s) 312, 692
MspI CCGG 2 cut(s) 519, 608
MspR9I CCNGG 1 cut(s) 309
Mva1269I GAATGC 3 cut(s) 881, 1099, 1140
MvaI CCWGG 1 cut(s) 309
MvnI CGCG 1 cut(s) 251
MwoI GCNNNNNNNGC 1 cut(s) 541
NdeI CATATG 1 cut(s) 397
NdeII GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
NlaIII CATG 5 cut(s) 125, 235, 298, 570, 1310
NlaIV GGNNCC 7 cut(s) 52, 171, 186, 606, 612, 936, 1016
NmuCI GTSAC 5 cut(s) 92, 590, 792, 1029, 1184
NsiI ATGCAT 3 cut(s) 568, 588, 1101
PagI TCATGA 1 cut(s) 1306
PciSI GCTCTTC 1 cut(s) 1332
PcsI WCGNNNNNNNCGW 1 cut(s) 1173
PctI GAATGC 3 cut(s) 881, 1099, 1140
PfeI GAWTC 2 cut(s) 1209, 1292
PflMI CCANNNNNTGG 1 cut(s) 127
PkrI GCNGC 1 cut(s) 70
PleI GAGTC 2 cut(s) 799, 1036
PpsI GAGTC 2 cut(s) 799, 1036
Psp6I CCWGG 1 cut(s) 307
PspGI CCWGG 1 cut(s) 307
PspN4I GGNNCC 7 cut(s) 52, 171, 186, 606, 612, 936, 1016
PspOMI GGGCCC 1 cut(s) 934
PspPI GGNCC 4 cut(s) 50, 934, 935, 1355
PstNI CAGNNNCTG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 169
RsaI GTAC 2 cut(s) 146, 865
RsaNI GTAC 2 cut(s) 145, 864
SapI GCTCTTC 1 cut(s) 1332
SaqAI TTAA 1 cut(s) 552
SatI GCNGC 1 cut(s) 69
Sau3AI GATC 6 cut(s) 169, 246, 1005, 1164, 1198, 1303
Sau96I GGNCC 4 cut(s) 50, 934, 935, 1355
SchI GAGTC 2 cut(s) 800, 1037
ScrFI CCNGG 1 cut(s) 309
SduI GDGCHC 3 cut(s) 187, 938, 951
SfaNI GCATC 4 cut(s) 409, 490, 553, 1086
SfcI CTRYAG 1 cut(s) 598
SinI GGWCC 1 cut(s) 50
SmlI CTYRAG 2 cut(s) 335, 1359
SmoI CTYRAG 2 cut(s) 335, 1359
Sse9I AATT 3 cut(s) 12, 646, 1314
SsiI CCGC 3 cut(s) 251, 503, 657
StyD4I CCNGG 1 cut(s) 307
StyI CCWWGG 2 cut(s) 536, 693
TaaI ACNGT 2 cut(s) 830, 863
TaiI ACGT 2 cut(s) 221, 1219
TaqI TCGA 1 cut(s) 1176
TaqII GACCGA 1 cut(s) 488
TasI AATT 3 cut(s) 12, 646, 1314
TatI WGTACW 1 cut(s) 863
TfiI GAWTC 2 cut(s) 1209, 1292
Tru1I TTAA 1 cut(s) 552
Tru9I TTAA 1 cut(s) 552
TscAI CASTG 3 cut(s) 143, 265, 715
TseFI GTSAC 5 cut(s) 92, 590, 792, 1029, 1184
TseI GCWGC 1 cut(s) 68
Tsp45I GTSAC 5 cut(s) 92, 590, 792, 1029, 1184
TspDTI ATGAA 2 cut(s) 384, 864
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 3 cut(s) 143, 265, 715
Van91I CCANNNNNTGG 1 cut(s) 127
VpaK11BI GGWCC 1 cut(s) 50
XagI CCTNNNNNAGG 1 cut(s) 178
XapI RAATTY 2 cut(s) 12, 646
XcmI CCANNNNNNNNNTGG 1 cut(s) 556
Zsp2I ATGCAT 3 cut(s) 568, 588, 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.