AT5G08450

Histone deacetylation protein Rxt3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005647
Physical Location & Seq
Reverse (-)
2727613 .. 2732925
5313 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08450.2

Sequence Viewer

Length: 2757 bp
ATGAGTGGTGTTCCAAAGAGATCTCACGAAGAGGGTGTTACTCATCCATCTTCTTCTTCATCAGTAGCAAAATACCCTCACGAGGATTCTGGATCTTACCCTAAATCGCCGCATCAGCCTGTGACGCCACCACCGGCTCAGGTTCATCATAACCATCAACAGCCCCATCAGCATCCCCAATCTCAATCTCAATCTCAGCCTCAACCTCACCTCCAGGCGCTTCCTCACCCTCATTCTCATTCTCACTCCCATTCACCACTTGCTGCTGCTGCTTCTGCTTCTGCTCCTTATGAGGTTGAATCTAGAACGGTGGTTAAGGTTGCGAGAAGCGAGCCTAGAGATGGAGAGAGACGCTCTCCTCTGCCTCTTGTCTATCGGTCTCCGTCGCTGCCCACAACTGTTTCTTCTAGTGATCCTCATTTGACTCACGCCCCTGTGCCGATGGAGCCGAGAGATGGTGCTAAGGATGGCAGGGAAATTAGGGTTGAGAGTAGAGAAAATAGGAGTGATGGGAGAGAGATATATGGTGAGACAAAGAGGGAGATTCAGGGTCCTAAGGGAGACAGAGATGTGAAATTTGAGAGATCAGTAGATGACTTTAGCGGAAAAGGTAATACCGGAAGCTATACTAGGAATGATGGGAGAGAGATGTATGGTGAGACTAAGAGGGAGATTCAGGGTCCTAAGAGTGACAGGGATGCCAAGTTTGAGCGTCCAGGGGATGATTTTAGCGGGAAAAGTAATGCCGGTAGCTATACTAGGGATACAAAATTTGATAGGGAGAATCAAAATTATAATGAACAAAAGGGGGAGATTAAGATGGAAAAGGAAGGGCATGCTCACTTGGCTTGGAAAGAGCAGAAGGATTACCATAGAGGGAAGAGAGTTGCTGAAGGTTCGACTGCAAATGTGGACCCGTGGGTTGTATCCCGCGGTAATCCGCAAGGCCCAACTGAGGTTGGGCCTAAAGATCTCTCTGCGCCTGTGGAGGGGTCTCATTTGGAAGGACGTGAAACCGTCGGAGAAAACAAGGTTGATGCCAAAAACGAAGATAGATTTAAGGAAAAAGATAAGAAAAGAAAAGAGTTAAAGCATCGAGAATGGGGGGACCGAGACAAGGATAGAAATGACCGTCGAGTATCTGTGCTTGTTGGTAGTGTCATGAGTGAACCCAAAGAGATTGGAAGAGAAGAAAGGGAATCCGATAGGTGGGAACGGGAGAGGATGGAGCAGAAAGATCGAGAAAGAAATAAAGAGAAAGATAAAGATCATATCAAAAGAGAGCCAAGGACTGGTGCTGAGAAAGAGATCTCGCAGAACGAGAAAGAGCTGGGAGAAGCATCTGCCAAACCCTCAGAGCAGGAATATGTGGCACCAGAGCAGAAGAAGCAGAACGAACCGGATAATTGTGAAAAAGACGAAAGAGAAACAAAGGAAAAAAGGAGAGAGAGGGATGGTGATTCAGAGGCAGAAAGAGCTGAAAAGCGCAGCAGAATCAGTGAAAAAGAATCTGAAGATGGGTGTTTAGAGGGTGAAGGAGCTACCGAGAGGGAAAAGGATGCCTTCAATTATGGGGTTCAGCAGAGGAAGAGAGCGCTGAGACCGAGAGGCAGCCCACAAACCACTAATCGCGACAATGTCCGCTCACGGAGTCAGGACAACGAAGGAGTACAAGGCAAGTCAGAGGTGTCGATTGTTGTTTACAAAGTTGGCGAATGTATGCAAGAACTGATTAAGTTGTGGAAAGAATATGATTTGTCTCATCCTGATAAAAGCGGTGATTTCGCTAATAATGGCCCCACTCTTGAAGTTAGGATTCCAGCTGAGCATGTTACTGCTACAAATCGCCAAGTAAGAGGTGGCCAACTATGGGGAACAGATATATACACAGACGATTCCGATCTTGTTGCTGTTCTCATGCATACAGGTTACTGTCGTCCCACAGCTTCTCCTCCTCCACCGACAATGCAAGAGCTGCGCACTACTATTAGAGTCTTGCCGTCACAAGATTACTACACCTCCAAGCTAAGGAACAATGTCCGTTCTCGAGCATGGGGAGCTGGAATCGGATGCAGTTATAGAGTTGAGCGGTGCTATATACTGAAGAAAGGAGGTGGGACTATTGAACTGGAACCTTCCCTTACACACTCCTCAACTGTGGAGCCAACTCTTGCACCAATGGCTGTTGAAAGATCTATGACCACCAGAGCTGCAGCTTCGAATGCTCTGCGGCAACAAAGGTTTGTACGAGAAGTCACAATACAATACAATCTCTGCAATGAACCTTGGATTAAATATAGCATAAGCATTGTTGCTGATAAAGGTCTCAAGAAGCCTCTTTTCACCTCTGCCCGCTTGAAGAAAGGGGAAGTTTTGTACTTAGAAACTCATTCATGCAGGTATGAGCTCTGTTTCGCAGGAGAGAAGACCATCAAAGCAATCCAAGCCTCACAACAACAATCATCACATGAAGCTATGGAGACAGATAATAATAATAACAAGTCACAGAACCATCTGACAAACGGTGACAAAACAGATTCAGACAACAGTTTAATTGATGTTTTCCGCTGGTCACGATGTAAGAAACCTCTCCCACAGAAGCTTATGCGGTCTATCGGGTTTCCACTCCCAGCAGATCATATCGAGGTGTTGGAGGAGAATCTTGATTGGGAAGATGTACAGTGGTCACAAACTGGTGTTTGGATTGCTGGAAAAGAGTACACTCTTGCTCGTGTTCATTTTCTCTCCCCCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rxt3

Protein Analysis

918

Amino Acids

104.15

Weight (kDa)

7.06

Isoelectric Point (pI)

50.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rxt3 PF08642 603 - 646 1.6e-11 Histone deacetylation protein Rxt3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc16I TGCGCA 1 cut(s) 1979
Acc36I ACCTGC 1 cut(s) 2388
AccB1I GGYRCC 1 cut(s) 1372
AccB7I CCANNNNNTGG 1 cut(s) 1292
AccBSI CCGCTC 2 cut(s) 1644, 2089
AccII CGCG 2 cut(s) 933, 1632
AclWI GGATC 2 cut(s) 100, 407
AcoI YGGCCR 1 cut(s) 1861
AcsI RAATTY 2 cut(s) 575, 770
AcuI CTGAAG 3 cut(s) 912, 1533, 2123
AcyI GRCGYC 1 cut(s) 125
AfaI GTAC 5 cut(s) 1671, 2247, 2378, 2679, 2720
AfeI AGCGCT 1 cut(s) 1596
AgsI TTSAA 6 cut(s) 299, 1567, 1808, 2126, 2189, 2359
AjiI CACGTC 1 cut(s) 1010
AjnI CCWGG 2 cut(s) 213, 715
Alw21I GWGCWC 1 cut(s) 2409
AlwI GGATC 2 cut(s) 100, 407
Ama87I CYCGRG 1 cut(s) 2046
Aor51HI AGCGCT 1 cut(s) 1596
AoxI GGCC 4 cut(s) 946, 962, 1795, 1861
ApeKI GCWGC 9 cut(s) 263, 266, 269, 388, 1488, 1611, 1975, 2210, 2213
ApoI RAATTY 2 cut(s) 575, 770
AspLEI GCGC 5 cut(s) 220, 982, 1488, 1597, 1980
AspS9I GGNCC 7 cut(s) 551, 680, 913, 947, 962, 1108, 1796
AsuII TTCGAA 1 cut(s) 2219
AvaI CYCGRG 1 cut(s) 2046
AvaII GGWCC 4 cut(s) 551, 680, 913, 1108
AxyI CCTNAGG 1 cut(s) 555
BalI TGGCCA 1 cut(s) 1863
BanI GGYRCC 1 cut(s) 1372
BanII GRGCYC 1 cut(s) 2409
BarI GAAGNNNNNNTAC 2 cut(s) 2244, 2276
BauI CACGAG 2 cut(s) 80, 2730
BbsI GAAGAC 1 cut(s) 2432
Bbv12I GWGCWC 1 cut(s) 2409
BbvI GCAGC 9 cut(s) 250, 253, 256, 375, 1500, 1623, 1962, 2197, 2225
BceAI ACGGC 1 cut(s) 1984
BcgI CGANNNNNNTGC 6 cut(s) 1220, 1254, 1889, 1923, 2209, 2243
BciT130I CCWGG 2 cut(s) 215, 717
BciVI GTATCC 2 cut(s) 757, 937
BfaI CTAG 5 cut(s) 303, 336, 408, 630, 759
BfmI CTRYAG 1 cut(s) 2211
BfoI RGCGCY 2 cut(s) 221, 1598
BfuAI ACCTGC 1 cut(s) 2388
BfuI GTATCC 2 cut(s) 757, 937
BglII AGATCT 4 cut(s) 20, 970, 1308, 2192
BlpI GCTNAGC 1 cut(s) 1824
Bme1390I CCNGG 2 cut(s) 215, 717
Bme18I GGWCC 4 cut(s) 551, 680, 913, 1108
BmeT110I CYCGRG 1 cut(s) 2046
BmgBI CACGTC 1 cut(s) 1010
BmgT120I GGNCC 7 cut(s) 551, 680, 913, 947, 962, 1108, 1796
BmiI GGNNCC 9 cut(s) 447, 552, 681, 915, 1109, 1374, 1798, 2133, 2163
BmrFI CCNGG 2 cut(s) 215, 717
BmsI GCATC 8 cut(s) 121, 181, 688, 1027, 1102, 1349, 1549, 2060
BpiI GAAGAC 1 cut(s) 2432
BplI GAGNNNNNCTC 4 cut(s) 338, 370, 340, 372
BpmI CTGGAG 1 cut(s) 197
Bpu10I CCTNAGC 3 cut(s) 138, 462, 2027
Bpu1102I GCTNAGC 1 cut(s) 1824
Bpu14I TTCGAA 1 cut(s) 2219
BpuEI CTTGAG 1 cut(s) 2312
BsaBI GATNNNNATC 2 cut(s) 1266, 1899
BsaHI GRCGYC 1 cut(s) 125
BsaI GGTCTC 4 cut(s) 384, 999, 1594, 2330
BsaJI CCNNGG 5 cut(s) 716, 917, 931, 1286, 2285
BsaWI WCCGGW 2 cut(s) 617, 1399
BsaXI ACNNNNNCTCC 6 cut(s) 195, 225, 1933, 1963, 2003, 2033
Bse118I RCCGGY 2 cut(s) 133, 746
Bse1I ACTGG 3 cut(s) 1297, 2133, 2698
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 1 cut(s) 2284
Bse8I GATNNNNATC 2 cut(s) 1266, 1899
BseBI CCWGG 2 cut(s) 215, 717
BseDI CCNNGG 5 cut(s) 716, 917, 931, 1286, 2285
BseJI GATNNNNATC 2 cut(s) 1266, 1899
BseMI GCAATG 1 cut(s) 2284
BseMII CTCAG 7 cut(s) 152, 209, 945, 1290, 1368, 1589, 1815
BseNI ACTGG 3 cut(s) 1297, 2133, 2698
BseRI GAGGAG 5 cut(s) 348, 1941, 1944, 2140, 2669
BseXI GCAGC 9 cut(s) 250, 253, 256, 375, 1500, 1623, 1962, 2197, 2225
BseYI CCCAGC 2 cut(s) 1330, 2629
Bsh1236I CGCG 2 cut(s) 933, 1632
BshFI GGCC 4 cut(s) 948, 964, 1797, 1863
BshNI GGYRCC 1 cut(s) 1372
BsiHKAI GWGCWC 1 cut(s) 2409
BsiHKCI CYCGRG 1 cut(s) 2046
BsiSI CCGG 4 cut(s) 134, 618, 747, 1400
BslFI GGGAC 3 cut(s) 1121, 1923, 2131
BsmBI CGTCTC 1 cut(s) 343
BsmFI GGGAC 3 cut(s) 1121, 1923, 2131
BsmI GAATGC 1 cut(s) 2227
BsnI GGCC 4 cut(s) 948, 964, 1797, 1863
Bso31I GGTCTC 4 cut(s) 384, 999, 1594, 2330
BsoBI CYCGRG 1 cut(s) 2046
Bsp119I TTCGAA 1 cut(s) 2219
Bsp1286I GDGCHC 1 cut(s) 2409
Bsp1407I TGTACA 1 cut(s) 2677
Bsp1720I GCTNAGC 1 cut(s) 1824
Bsp68I TCGCGA 1 cut(s) 1632
BspANI GGCC 4 cut(s) 948, 964, 1797, 1863
BspCNI CTCAG 7 cut(s) 151, 208, 946, 1291, 1367, 1590, 1816
BspFNI CGCG 2 cut(s) 933, 1632
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 9 cut(s) 447, 552, 681, 915, 1109, 1374, 1798, 2133, 2163
BspMAI CTGCAG 1 cut(s) 2215
BspMI ACCTGC 1 cut(s) 2388
BspPI GGATC 2 cut(s) 100, 407
BspT104I TTCGAA 1 cut(s) 2219
BspT107I GGYRCC 1 cut(s) 1372
BspTNI GGTCTC 4 cut(s) 384, 999, 1594, 2330
BsrBI CCGCTC 2 cut(s) 1644, 2089
BsrDI GCAATG 1 cut(s) 2284
BsrFI RCCGGY 2 cut(s) 133, 746
BsrGI TGTACA 1 cut(s) 2677
BsrI ACTGG 3 cut(s) 1297, 2133, 2698
BssAI RCCGGY 2 cut(s) 133, 746
BssECI CCNNGG 5 cut(s) 716, 917, 931, 1286, 2285
BssNI GRCGYC 1 cut(s) 125
BssSI CACGAG 2 cut(s) 80, 2730
BssT1I CCWWGG 2 cut(s) 1286, 2285
Bst2BI CACGAG 2 cut(s) 80, 2730
Bst2UI CCWGG 2 cut(s) 215, 717
Bst4CI ACNGT 9 cut(s) 310, 400, 1018, 1133, 1934, 2158, 2525, 2549, 2682
Bst6I CTCTTC 4 cut(s) 24, 875, 1180, 1583
BstACI GRCGYC 1 cut(s) 125
BstAPI GCANNNNNTGC 1 cut(s) 1975
BstAUI TGTACA 1 cut(s) 2677
BstBI TTCGAA 1 cut(s) 2219
BstC8I GCNNGC 3 cut(s) 332, 837, 2353
BstDSI CCRYGG 2 cut(s) 917, 931
BstFNI CGCG 2 cut(s) 933, 1632
BstH2I RGCGCY 2 cut(s) 221, 1598
BstHHI GCGC 5 cut(s) 220, 982, 1488, 1597, 1980
BstNI CCWGG 2 cut(s) 215, 717
BstNSI RCATGY 2 cut(s) 839, 1832
BstSCI CCNGG 2 cut(s) 213, 715
BstSFI CTRYAG 1 cut(s) 2211
BstUI CGCG 2 cut(s) 933, 1632
BstV1I GCAGC 9 cut(s) 250, 253, 256, 375, 1500, 1623, 1962, 2197, 2225
BstV2I GAAGAC 1 cut(s) 2432
BstX2I RGATCY 5 cut(s) 20, 92, 970, 1308, 2192
BstYI RGATCY 5 cut(s) 20, 92, 970, 1308, 2192
Bsu36I CCTNAGG 1 cut(s) 555
BsuI GTATCC 2 cut(s) 757, 937
BsuRI GGCC 4 cut(s) 948, 964, 1797, 1863
BtgI CCRYGG 2 cut(s) 917, 931
BtrI CACGTC 1 cut(s) 1010
BtsIMutI CAGTG 2 cut(s) 1504, 2687
BtuMI TCGCGA 1 cut(s) 1632
BveI ACCTGC 1 cut(s) 2388
Cac8I GCNNGC 3 cut(s) 332, 837, 2353
CciI TCATGA 1 cut(s) 1161
CfoI GCGC 5 cut(s) 220, 982, 1488, 1597, 1980
Cfr10I RCCGGY 2 cut(s) 133, 746
Cfr13I GGNCC 7 cut(s) 551, 680, 913, 947, 962, 1108, 1796
Cfr42I CCGCGG 1 cut(s) 934
CseI GACGC 3 cut(s) 133, 360, 701
Csp6I GTAC 5 cut(s) 1670, 2246, 2377, 2678, 2719
CviAII CATG 7 cut(s) 836, 1162, 1829, 1918, 2052, 2394, 2468
CviQI GTAC 5 cut(s) 1670, 2246, 2377, 2678, 2719
EaeI YGGCCR 1 cut(s) 1861
Eam1104I CTCTTC 4 cut(s) 24, 875, 1180, 1583
EarI CTCTTC 4 cut(s) 24, 875, 1180, 1583
Ecl136II GAGCTC 1 cut(s) 2407
Eco130I CCWWGG 2 cut(s) 1286, 2285
Eco24I GRGCYC 1 cut(s) 2409
Eco31I GGTCTC 4 cut(s) 384, 999, 1594, 2330
Eco47I GGWCC 4 cut(s) 551, 680, 913, 1108
Eco47III AGCGCT 1 cut(s) 1596
Eco53kI GAGCTC 1 cut(s) 2407
Eco57I CTGAAG 3 cut(s) 912, 1533, 2123
Eco81I CCTNAGG 1 cut(s) 555
Eco88I CYCGRG 1 cut(s) 2046
EcoICRI GAGCTC 1 cut(s) 2407
EcoO109I RGGNCCY 2 cut(s) 551, 680
EcoRII CCWGG 2 cut(s) 213, 715
EcoT14I CCWWGG 2 cut(s) 1286, 2285
EcoT22I ATGCAT 1 cut(s) 1923
EcoT38I GRGCYC 1 cut(s) 2409
ErhI CCWWGG 2 cut(s) 1286, 2285
Esp3I CGTCTC 1 cut(s) 343
FaeI CATG 7 cut(s) 839, 1165, 1832, 1921, 2055, 2397, 2471
FalI AAGNNNNNCTT 2 cut(s) 1547, 1579
FaqI GGGAC 3 cut(s) 1121, 1923, 2131
FatI CATG 7 cut(s) 835, 1161, 1828, 1917, 2051, 2393, 2467
FauI CCCGC 3 cut(s) 725, 938, 2360
FriOI GRGCYC 1 cut(s) 2409
FspBI CTAG 5 cut(s) 303, 336, 408, 630, 759
FspI TGCGCA 1 cut(s) 1979
GlaI GCGC 5 cut(s) 219, 981, 1487, 1596, 1979
GsaI CCCAGC 2 cut(s) 1334, 2633
GsuI CTGGAG 1 cut(s) 197
HaeII RGCGCY 2 cut(s) 221, 1598
HaeIII GGCC 4 cut(s) 948, 964, 1797, 1863
HapII CCGG 4 cut(s) 134, 618, 747, 1400
HgaI GACGC 3 cut(s) 133, 360, 701
HhaI GCGC 5 cut(s) 220, 982, 1488, 1597, 1980
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 7 cut(s) 839, 1165, 1832, 1921, 2055, 2397, 2471
Hin6I GCGC 5 cut(s) 218, 980, 1486, 1595, 1978
HinP1I GCGC 5 cut(s) 218, 980, 1486, 1595, 1978
HindIII AAGCTT 1 cut(s) 2600
HpaII CCGG 4 cut(s) 134, 618, 747, 1400
Hpy166II GTNNAC 4 cut(s) 913, 1169, 1702, 2721
Hpy8I GTNNAC 4 cut(s) 913, 1169, 1702, 2721
Hpy99I CGWCG 3 cut(s) 388, 1022, 1137
HpyAV CCTTC 8 cut(s) 824, 856, 887, 998, 1529, 1573, 1658, 2145
HpyCH4III ACNGT 9 cut(s) 310, 400, 1018, 1133, 1934, 2158, 2525, 2549, 2682
HpyCH4IV ACGT 1 cut(s) 1009
HpyCH4V TGCA 9 cut(s) 905, 1723, 1921, 1969, 2073, 2174, 2213, 2277, 2397
HpySE526I ACGT 1 cut(s) 1009
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 7 cut(s) 839, 1165, 1832, 1921, 2055, 2397, 2471
HspAI GCGC 5 cut(s) 218, 980, 1486, 1595, 1978
KspI CCGCGG 1 cut(s) 934
LmnI GCTCC 6 cut(s) 289, 445, 1228, 1538, 2057, 2161
Lsp1109I GCAGC 9 cut(s) 250, 253, 256, 375, 1500, 1623, 1962, 2197, 2225
LweI GCATC 8 cut(s) 121, 181, 688, 1027, 1102, 1349, 1549, 2060
MaeI CTAG 5 cut(s) 303, 336, 408, 630, 759
MaeII ACGT 1 cut(s) 1009
MbiI CCGCTC 2 cut(s) 1644, 2089
MflI RGATCY 5 cut(s) 20, 92, 970, 1308, 2192
MhlI GDGCHC 1 cut(s) 2409
MlsI TGGCCA 1 cut(s) 1863
MluCI AATT 7 cut(s) 477, 575, 770, 790, 1405, 1567, 2553
MluNI TGGCCA 1 cut(s) 1863
MlyI GAGTC 3 cut(s) 418, 1660, 2001
MmeI TCCRAC 2 cut(s) 1000, 2631
Mox20I TGGCCA 1 cut(s) 1863
Mph1103I ATGCAT 1 cut(s) 1923
MscI TGGCCA 1 cut(s) 1863
MseI TTAA 7 cut(s) 315, 816, 1059, 1088, 1734, 2292, 2552
Msp20I TGGCCA 1 cut(s) 1863
MspA1I CMGCKG 3 cut(s) 933, 1823, 2568
MspI CCGG 4 cut(s) 134, 618, 747, 1400
MspR9I CCNGG 2 cut(s) 215, 717
Mva1269I GAATGC 1 cut(s) 2227
MvaI CCWGG 2 cut(s) 215, 717
MvnI CGCG 2 cut(s) 933, 1632
NlaIII CATG 7 cut(s) 839, 1165, 1832, 1921, 2055, 2397, 2471
NlaIV GGNNCC 9 cut(s) 447, 552, 681, 915, 1109, 1374, 1798, 2133, 2163
NmeAIII GCCGAG 1 cut(s) 474
NmuCI GTSAC 8 cut(s) 121, 689, 2001, 2254, 2502, 2525, 2571, 2685
NruI TCGCGA 1 cut(s) 1632
NsbI TGCGCA 1 cut(s) 1979
NsiI ATGCAT 1 cut(s) 1923
NspI RCATGY 2 cut(s) 839, 1832
NspV TTCGAA 1 cut(s) 2219
PaeI GCATGC 1 cut(s) 839
PaeR7I CTCGAG 1 cut(s) 2046
PagI TCATGA 1 cut(s) 1161
PctI GAATGC 1 cut(s) 2227
PflFI GACNNNGTC 1 cut(s) 1637
PflMI CCANNNNNTGG 1 cut(s) 1292
PleI GAGTC 3 cut(s) 418, 1659, 2000
PpsI GAGTC 3 cut(s) 418, 1659, 2000
PpuMI RGGWCCY 2 cut(s) 551, 680
PsiI TTATAA 1 cut(s) 795
Psp124BI GAGCTC 1 cut(s) 2409
Psp5II RGGWCCY 2 cut(s) 551, 680
Psp6I CCWGG 2 cut(s) 213, 715
PspFI CCCAGC 2 cut(s) 1330, 2629
PspGI CCWGG 2 cut(s) 213, 715
PspN4I GGNNCC 9 cut(s) 447, 552, 681, 915, 1109, 1374, 1798, 2133, 2163
PspPI GGNCC 7 cut(s) 551, 680, 913, 947, 962, 1108, 1796
PspPPI RGGWCCY 2 cut(s) 551, 680
PstI CTGCAG 1 cut(s) 2215
PsuI RGATCY 5 cut(s) 20, 92, 970, 1308, 2192
PsyI GACNNNGTC 1 cut(s) 1637
PvuII CAGCTG 1 cut(s) 1823
RruI TCGCGA 1 cut(s) 1632
RsaI GTAC 5 cut(s) 1671, 2247, 2378, 2679, 2720
RsaNI GTAC 5 cut(s) 1670, 2246, 2377, 2678, 2719
SacI GAGCTC 1 cut(s) 2409
SacII CCGCGG 1 cut(s) 934
SaqAI TTAA 7 cut(s) 315, 816, 1059, 1088, 1734, 2292, 2552
Sau96I GGNCC 7 cut(s) 551, 680, 913, 947, 962, 1108, 1796
SchI GAGTC 3 cut(s) 418, 1660, 2001
ScrFI CCNGG 2 cut(s) 215, 717
SduI GDGCHC 1 cut(s) 2409
SfaNI GCATC 8 cut(s) 121, 181, 688, 1027, 1102, 1349, 1549, 2060
SfcI CTRYAG 1 cut(s) 2211
Sfr274I CTCGAG 1 cut(s) 2046
Sfr303I CCGCGG 1 cut(s) 934
SfuI TTCGAA 1 cut(s) 2219
SgrBI CCGCGG 1 cut(s) 934
SinI GGWCC 4 cut(s) 551, 680, 913, 1108
SlaI CTCGAG 1 cut(s) 2046
SmlI CTYRAG 2 cut(s) 2046, 2327
SmoI CTYRAG 2 cut(s) 2046, 2327
SphI GCATGC 1 cut(s) 839
Sse9I AATT 7 cut(s) 477, 575, 770, 790, 1405, 1567, 2553
SspMI CTAG 5 cut(s) 303, 336, 408, 630, 759
SstI GAGCTC 1 cut(s) 2409
StyD4I CCNGG 2 cut(s) 213, 715
StyI CCWWGG 2 cut(s) 1286, 2285
TaaI ACNGT 9 cut(s) 310, 400, 1018, 1133, 1934, 2158, 2525, 2549, 2682
TaiI ACGT 1 cut(s) 1012
TaqI TCGA 8 cut(s) 899, 1096, 1135, 1240, 1691, 2047, 2219, 2643
TaqII GACCGA 3 cut(s) 366, 1125, 1618
TasI AATT 7 cut(s) 477, 575, 770, 790, 1405, 1567, 2553
TatI WGTACW 4 cut(s) 1669, 2376, 2677, 2718
TauI GCSGC 2 cut(s) 112, 2233
Tru1I TTAA 7 cut(s) 315, 816, 1059, 1088, 1734, 2292, 2552
Tru9I TTAA 7 cut(s) 315, 816, 1059, 1088, 1734, 2292, 2552
TscAI CASTG 2 cut(s) 1504, 2687
TseFI GTSAC 8 cut(s) 121, 689, 2001, 2254, 2502, 2525, 2571, 2685
TseI GCWGC 9 cut(s) 263, 266, 269, 388, 1488, 1611, 1975, 2210, 2213
Tsp45I GTSAC 8 cut(s) 121, 689, 2001, 2254, 2502, 2525, 2571, 2685
TspDTI ATGAA 7 cut(s) 48, 134, 813, 2295, 2382, 2484, 2726
TspGWI ACGGA 3 cut(s) 372, 1663, 2030
TspRI CASTG 2 cut(s) 1504, 2687
Tth111I GACNNNGTC 1 cut(s) 1637
Van91I CCANNNNNTGG 1 cut(s) 1292
VpaK11BI GGWCC 4 cut(s) 551, 680, 913, 1108
XapI RAATTY 2 cut(s) 575, 770
XbaI TCTAGA 1 cut(s) 302
XceI RCATGY 2 cut(s) 839, 1832
XcmI CCANNNNNNNNNTGG 1 cut(s) 1856
XhoI CTCGAG 1 cut(s) 2046
XspI CTAG 5 cut(s) 303, 336, 408, 630, 759
Zsp2I ATGCAT 1 cut(s) 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.