Rroxscaffold_6G00397250

Histone deacetylation protein Rxt3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0005647
Physical Location & Seq
Reverse (-)
18903917 .. 18913561
9645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00397250.1

Sequence Viewer

Length: 2406 bp
ATGAGTGGTGCACCAAAGAGATCTCATGAAGAGAGCGGCCATTCCTCCTCTTCGAAGTACCCACATGAAGATTCAGGAACATACCCCAAGCTGCCGCCATCGGTTTCAAATGAGTATCATCAACCCTATGAGATGGGTCAAGATTCTCGACTCACGAAGATTCCCCGTACAGAATCCCGCGATGCGGATAGAAGATCTCCCCTGCATTCAATATATCGAATGCCATCAGCTTCAAATGATTTGCATGTAGATCACCCTCCTGCTTCTGAAAACAGGTTGGAGTCCAGAGATTCCAAGGATACTCGAGATCTTCGGTTTGAGAACCGAGACAAAAAGACTGAGACAAGGGAACCATACAGTGAGGTAAGAAGGGATACTCCAAATGCTAAGGTTGAAAAGGATTTAAGACATGACAGTAGAGGGGATGATAATAAGGAGGTGAAATCTGAAAGGGAGAATTATAGTGATGCTAAGGCTGACCTCAAAGCAGAAGGTTATGGTGTGGCAAGTAGTCACTTAAATTATAAAGAATCAAAAGAGTACCATAGAGGCAAACGATATTCTGATGCGCCAGTAGGAAGTACAGATACATGGCATCGCAGTACTTCACAAGGCCATGTTGAGGTTGGAAAGGAAGTCCCCACTACTGAGGAGCGAGATCATGTAGAGGCACATGAGGCTGTTGGGGAGAACAGATATGATTCTAAAGGTGATGATAAGTTCAAAGACAAGGATAGAAAAAGGAAAGACATAAAGCATCGGGATTGGGGAGAAAGGGACAAGGAAAGAAGTGACCGTAGGAGCAATGTGCAAGTAGCTAACAGCAGTAGTGATTGCAAAGACTCAGCAAAGGAAGAAAGAGATGCAGAGAGGTGGGAGCGTGAGCGGAGGGACACTGCAAAAGATAAGGAAATACTAAAAGAGAGGGAAAGGGATCATACCAAGAGAGATACATGGAGTGGAGTAGAGAAAGATAGTTCAAATACTGAGAAGGAAGTGGGGGATGGGTCTATCAGAATGCCAGAGCATGAAACTCTGCCACCAGAGCAGAAGAAACAGAAAGATTTTGAAAGTTGGAGAACTGCTGATAGGGAATCGAGAGATAGGAGGAAAGAAAGAGATGTTGACGCTGAGGGAGATAGACCTGAAAAGCGCATTAGGGGTTATGACAAAGAATCAGATGATGGAGGTGCAGATGGTGAAGCGGCCACAGACAAAGAAAGGGAAGTTTATAATTATGGAGTTCAGCAGCGTAAAAGGATGCAACGGTCAAGGGCTGCCCCAGCAAATCGGGAGCTGCGTTTTAGATCACATACACAAGACAATGAAGGATCCCAAGGTAAAGCTGAAGTATCTTCTGTTGTTTATAAAGTCGGTGAATGCATGCAAGAATTGATAAAGTTATGGAAGGAACATGAAGCATCTCCGGGTGAAAAAAATGGTGAAACCTCTGTTACTGGTCCGACACTTGAAATTCGGATACCTTCCGAGCATGTTACAGCAACAAATCGCCAAGTTAGAGGTGGTCAACTGTGGGGAACAGATATATACACAGATGATTCAGATCTTGTTGCTGTCCTCATGCATACAGGGTATTGCCGACCCACAGCGTCTCCTCCACCTTCTGCTATCCAGGAGTTGCGTGCTACAGTTCGAATACTACCCCCACAAGACTGTTACATTTCTACCCTGAGAAATAATGTTCGTTCTCGTGCGTGGGGAGCTGCTATTGGTTGTAGCTATCGTGTTGAGCGCTGCTGCATAGTGAAGAAAGCAGGAGGAAGTATCGATCTTGAACCCTGTCTAACACATACTTCTACAGTGGAGCCTACTCTTGCTCCAGTTGTTGTTGAGCGTACAATGACTACAAGGGCTGCAGCTTCGAATGCATTGCGACAACAAAGATTTGTACGAGAAGTTACTATACAGTACAACCTCTGCAATGAGCCTTGGATCAAATACAGCATAAGCATTGTTGCTGACAAGGGTTTGAAGAAAACCCTTTATACTTCTGCACGTTTAAAGAAGGGAGAAGTTCTCTATTTAGAAACACATTCATGCAGGTATGAGCTCTGTTTTAATGGGGAGAAGATCATCAAAGCCAGTCAATTATCTCAGATGCATGAAGGTGAGAATGAGAAGAATCAGAATCATGCTTCGCATTCCACAAATGGTGAAAGAAATGATTCTGAAAACATTATAGTAGATGTATTTCGATGGTCCCGATGTAAAACACCTCTTCCCCAGAAGGTCATGCGGTCAGTTGGGATCCCTTTGCCCCTTGAACATGTGGAGGTGTTGGAGGAAAATCTTGACTGGGAGGATGTGCAATGGTCACAGACTGGCGTTTGGATTGCTGGAAAAGAGTATTCACTTGCACGGGTGCATTTTCTGTCTGTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rxt3

Protein Analysis

801

Amino Acids

91.82

Weight (kDa)

6.59

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rxt3 PF08642 491 - 534 1.1e-11 Histone deacetylation protein Rxt3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 525, 1233, 1368
Acc36I ACCTGC 1 cut(s) 2052
AccBSI CCGCTC 2 cut(s) 36, 886
AccII CGCG 1 cut(s) 180
AciI CCGC 7 cut(s) 36, 95, 178, 185, 886, 1205, 2257
AclWI GGATC 6 cut(s) 942, 1326, 1339, 1961, 2263, 2276
AcoI YGGCCR 2 cut(s) 37, 1206
AcsI RAATTY 1 cut(s) 1473
AcuI CTGAAG 1 cut(s) 1368
AfaI GTAC 8 cut(s) 59, 169, 542, 583, 604, 1858, 1911, 1931
AfeI AGCGCT 1 cut(s) 1754
AfiI CCNNNNNNNGG 2 cut(s) 184, 622
AflIII ACRYGT 1 cut(s) 2287
AjnI CCWGG 1 cut(s) 1632
AluBI AGCT 9 cut(s) 91, 230, 818, 1297, 1346, 1724, 1740, 1880, 2071
AluI AGCT 9 cut(s) 91, 230, 818, 1297, 1346, 1724, 1740, 1880, 2071
Alw21I GWGCWC 2 cut(s) 13, 2073
Alw26I GTCTC 3 cut(s) 321, 335, 1617
Alw44I GTGCAC 1 cut(s) 9
AlwI GGATC 6 cut(s) 942, 1326, 1339, 1961, 2263, 2276
Ama87I CYCGRG 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 1754
AoxI GGCC 3 cut(s) 37, 613, 1206
ApaLI GTGCAC 1 cut(s) 9
ApeKI GCWGC 9 cut(s) 91, 1249, 1277, 1297, 1724, 1755, 1758, 1874, 1877
ApoI RAATTY 1 cut(s) 1473
Asp700I GAANNNNTTC 1 cut(s) 2185
AspLEI GCGC 3 cut(s) 571, 1155, 1755
AspS9I GGNCC 2 cut(s) 1460, 2220
AsuC2I CCSGG 1 cut(s) 1428
AsuHPI GGTGA 9 cut(s) 245, 451, 722, 1211, 1388, 1442, 1454, 2141, 2186
AsuII TTCGAA 3 cut(s) 53, 1654, 1883
AvaI CYCGRG 1 cut(s) 303
AvaII GGWCC 2 cut(s) 1460, 2220
BaeGI GKGCMC 1 cut(s) 13
BamHI GGATCC 2 cut(s) 1331, 2268
BanII GRGCYC 1 cut(s) 2073
BarI GAAGNNNNNNTAC 4 cut(s) 571, 603, 1908, 1940
BauI CACGAG 1 cut(s) 1710
Bbv12I GWGCWC 2 cut(s) 13, 2073
BbvCI CCTCAGC 1 cut(s) 1131
BbvI GCAGC 9 cut(s) 78, 1261, 1264, 1284, 1711, 1742, 1745, 1861, 1889
BccI CCATC 7 cut(s) 106, 127, 232, 998, 1178, 1190, 2211
BcgI CGANNNNNNTGC 2 cut(s) 1873, 1907
BciT130I CCWGG 1 cut(s) 1634
BciVI GTATCC 3 cut(s) 292, 367, 1473
BcnI CCSGG 1 cut(s) 1428
BcoDI GTCTC 3 cut(s) 321, 335, 1617
BfmI CTRYAG 3 cut(s) 1647, 1818, 1875
BfoI RGCGCY 1 cut(s) 1756
BfuAI ACCTGC 1 cut(s) 2052
BfuI GTATCC 3 cut(s) 292, 367, 1473
BglII AGATCT 4 cut(s) 20, 194, 307, 1564
BmcAI AGTACT 1 cut(s) 604
Bme1390I CCNGG 2 cut(s) 1428, 1634
Bme18I GGWCC 2 cut(s) 1460, 2220
BmeT110I CYCGRG 1 cut(s) 303
BmgT120I GGNCC 2 cut(s) 1460, 2220
BmiI GGNNCC 5 cut(s) 351, 1333, 1827, 2222, 2270
BmrFI CCNGG 2 cut(s) 1428, 1634
BmrI ACTGGG 1 cut(s) 2326
BmsI GCATC 9 cut(s) 172, 457, 556, 604, 766, 853, 1251, 1430, 2109
BmuI ACTGGG 1 cut(s) 2326
BplI GAGNNNNNCTC 2 cut(s) 2022, 2054
BpmI CTGGAG 1 cut(s) 1824
Bpu10I CCTNAGC 3 cut(s) 387, 471, 1131
Bpu14I TTCGAA 3 cut(s) 53, 1654, 1883
BpuMI CCSGG 1 cut(s) 1428
Bsa29I ATCGAT 1 cut(s) 1788
BsaBI GATNNNNATC 1 cut(s) 1563
BsaJI CCNNGG 3 cut(s) 294, 1336, 1949
BsaXI ACNNNNNCTCC 4 cut(s) 1597, 1627, 1822, 1852
Bsc4I CCNNNNNNNGG 2 cut(s) 184, 622
Bse1I ACTGG 6 cut(s) 572, 1462, 1841, 2103, 2321, 2347
Bse3DI GCAATG 4 cut(s) 811, 1889, 1948, 2336
Bse8I GATNNNNATC 1 cut(s) 1563
BseBI CCWGG 1 cut(s) 1634
BseCI ATCGAT 1 cut(s) 1788
BseDI CCNNGG 3 cut(s) 294, 1336, 1949
BseGI GGATG 4 cut(s) 430, 1009, 1266, 2329
BseJI GATNNNNATC 1 cut(s) 1563
BseLI CCNNNNNNNGG 2 cut(s) 184, 622
BseMI GCAATG 4 cut(s) 811, 1889, 1948, 2336
BseMII CTCAG 7 cut(s) 330, 639, 858, 978, 1122, 1682, 2129
BseNI ACTGG 6 cut(s) 572, 1462, 1841, 2103, 2321, 2347
BseRI GAGGAG 3 cut(s) 37, 665, 1605
BseSI GKGCMC 1 cut(s) 13
BseXI GCAGC 9 cut(s) 78, 1261, 1264, 1284, 1711, 1742, 1745, 1861, 1889
BseYI CCCAGC 1 cut(s) 1282
BsgI GTGCAG 2 cut(s) 1212, 1998
Bsh1236I CGCG 1 cut(s) 180
BshFI GGCC 3 cut(s) 39, 615, 1208
BshVI ATCGAT 1 cut(s) 1788
BsiHKAI GWGCWC 2 cut(s) 13, 2073
BsiHKCI CYCGRG 1 cut(s) 303
BsiSI CCGG 1 cut(s) 1427
BslFI GGGAC 4 cut(s) 623, 791, 905, 2206
BslI CCNNNNNNNGG 2 cut(s) 184, 622
BsmAI GTCTC 3 cut(s) 321, 335, 1617
BsmBI CGTCTC 1 cut(s) 1617
BsmFI GGGAC 4 cut(s) 623, 791, 905, 2206
BsmI GAATGC 6 cut(s) 205, 225, 1023, 1385, 1891, 2161
BsnI GGCC 3 cut(s) 39, 615, 1208
BsoBI CYCGRG 1 cut(s) 303
Bsp119I TTCGAA 3 cut(s) 53, 1654, 1883
Bsp1286I GDGCHC 2 cut(s) 13, 2073
BspACI CCGC 7 cut(s) 36, 95, 178, 185, 886, 1205, 2257
BspANI GGCC 3 cut(s) 39, 615, 1208
BspCNI CTCAG 7 cut(s) 331, 640, 857, 979, 1123, 1683, 2128
BspDI ATCGAT 1 cut(s) 1788
BspFNI CGCG 1 cut(s) 180
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 5 cut(s) 351, 1333, 1827, 2222, 2270
BspMAI CTGCAG 1 cut(s) 1879
BspMI ACCTGC 1 cut(s) 2052
BspPI GGATC 6 cut(s) 942, 1326, 1339, 1961, 2263, 2276
BspT104I TTCGAA 3 cut(s) 53, 1654, 1883
BsrBI CCGCTC 2 cut(s) 36, 886
BsrDI GCAATG 4 cut(s) 811, 1889, 1948, 2336
BsrI ACTGG 6 cut(s) 572, 1462, 1841, 2103, 2321, 2347
BssECI CCNNGG 3 cut(s) 294, 1336, 1949
BssSI CACGAG 1 cut(s) 1710
BssT1I CCWWGG 3 cut(s) 294, 1336, 1949
Bst2BI CACGAG 1 cut(s) 1710
Bst2UI CCWGG 1 cut(s) 1634
Bst4CI ACNGT 9 cut(s) 359, 416, 797, 1269, 1533, 1651, 1676, 1822, 1929
Bst6I CTCTTC 3 cut(s) 24, 55, 2244
BstBI TTCGAA 3 cut(s) 53, 1654, 1883
BstC8I GCNNGC 2 cut(s) 1385, 1644
BstDEI CTNAG 9 cut(s) 339, 387, 471, 648, 844, 987, 1131, 1691, 2115
BstF5I GGATG 4 cut(s) 430, 1009, 1266, 2329
BstFNI CGCG 1 cut(s) 180
BstH2I RGCGCY 1 cut(s) 1756
BstHHI GCGC 3 cut(s) 571, 1155, 1755
BstMAI GTCTC 3 cut(s) 321, 335, 1617
BstMWI GCNNNNNNNGC 5 cut(s) 677, 1045, 1283, 1721, 1886
BstNI CCWGG 1 cut(s) 1634
BstNSI RCATGY 4 cut(s) 248, 1387, 1496, 2291
BstSCI CCNGG 2 cut(s) 1426, 1632
BstSFI CTRYAG 3 cut(s) 1647, 1818, 1875
BstSLI GKGCMC 1 cut(s) 13
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 9 cut(s) 78, 1261, 1264, 1284, 1711, 1742, 1745, 1861, 1889
BstX2I RGATCY 6 cut(s) 20, 194, 307, 1331, 1564, 2268
BstYI RGATCY 6 cut(s) 20, 194, 307, 1331, 1564, 2268
Bsu15I ATCGAT 1 cut(s) 1788
BsuI GTATCC 3 cut(s) 292, 367, 1473
BsuRI GGCC 3 cut(s) 39, 615, 1208
BsuTUI ATCGAT 1 cut(s) 1788
BtgZI GCGATG 2 cut(s) 195, 581
BtsCI GGATG 4 cut(s) 430, 1009, 1266, 2329
BtsI GCAGTG 1 cut(s) 894
BtsIMutI CAGTG 3 cut(s) 364, 894, 1827
BveI ACCTGC 1 cut(s) 2052
Cac8I GCNNGC 2 cut(s) 1385, 1644
CciI TCATGA 1 cut(s) 25
CfoI GCGC 3 cut(s) 571, 1155, 1755
Cfr13I GGNCC 2 cut(s) 1460, 2220
ClaI ATCGAT 1 cut(s) 1788
CseI GACGC 2 cut(s) 1136, 1599
Csp6I GTAC 8 cut(s) 58, 168, 541, 582, 603, 1857, 1910, 1930
CviQI GTAC 8 cut(s) 58, 168, 541, 582, 603, 1857, 1910, 1930
DdeI CTNAG 9 cut(s) 339, 387, 471, 648, 844, 987, 1131, 1691, 2115
DraI TTTAAA 1 cut(s) 2022
EaeI YGGCCR 2 cut(s) 37, 1206
Eam1104I CTCTTC 3 cut(s) 24, 55, 2244
EarI CTCTTC 3 cut(s) 24, 55, 2244
Ecl136II GAGCTC 1 cut(s) 2071
Eco130I CCWWGG 3 cut(s) 294, 1336, 1949
Eco24I GRGCYC 1 cut(s) 2073
Eco47I GGWCC 2 cut(s) 1460, 2220
Eco47III AGCGCT 1 cut(s) 1754
Eco53kI GAGCTC 1 cut(s) 2071
Eco57I CTGAAG 1 cut(s) 1368
Eco88I CYCGRG 1 cut(s) 303
EcoICRI GAGCTC 1 cut(s) 2071
EcoRII CCWGG 1 cut(s) 1632
EcoT14I CCWWGG 3 cut(s) 294, 1336, 1949
EcoT22I ATGCAT 4 cut(s) 1385, 1587, 1891, 2124
EcoT38I GRGCYC 1 cut(s) 2073
ErhI CCWWGG 3 cut(s) 294, 1336, 1949
Esp3I CGTCTC 1 cut(s) 1617
FaqI GGGAC 4 cut(s) 623, 791, 905, 2206
FauI CCCGC 1 cut(s) 185
FokI GGATG 4 cut(s) 437, 1016, 1273, 2336
FriOI GRGCYC 1 cut(s) 2073
GlaI GCGC 3 cut(s) 570, 1154, 1754
GsaI CCCAGC 1 cut(s) 1286
GsuI CTGGAG 1 cut(s) 1824
HaeII RGCGCY 1 cut(s) 1756
HaeIII GGCC 3 cut(s) 39, 615, 1208
HapII CCGG 1 cut(s) 1427
HgaI GACGC 2 cut(s) 1136, 1599
HhaI GCGC 3 cut(s) 571, 1155, 1755
Hin6I GCGC 3 cut(s) 569, 1153, 1753
HinP1I GCGC 3 cut(s) 569, 1153, 1753
HincII GTYRAC 2 cut(s) 1126, 1529
HindII GTYRAC 2 cut(s) 1126, 1529
HpaII CCGG 1 cut(s) 1427
HphI GGTGA 9 cut(s) 245, 451, 722, 1211, 1388, 1442, 1454, 2141, 2186
Hpy166II GTNNAC 3 cut(s) 11, 1126, 1529
Hpy8I GTNNAC 3 cut(s) 11, 1126, 1529
HpyCH4III ACNGT 9 cut(s) 359, 416, 797, 1269, 1533, 1651, 1676, 1822, 1929
HpyCH4IV ACGT 1 cut(s) 2017
HpyF10VI GCNNNNNNNGC 5 cut(s) 677, 1045, 1283, 1721, 1886
HpyF3I CTNAG 9 cut(s) 339, 387, 471, 648, 844, 987, 1131, 1691, 2115
HpySE526I ACGT 1 cut(s) 2017
HspAI GCGC 3 cut(s) 569, 1153, 1753
LmnI GCTCC 7 cut(s) 652, 801, 877, 1294, 1721, 1825, 1843
Lsp1109I GCAGC 9 cut(s) 78, 1261, 1264, 1284, 1711, 1742, 1745, 1861, 1889
LweI GCATC 9 cut(s) 172, 457, 556, 604, 766, 853, 1251, 1430, 2109
MaeII ACGT 1 cut(s) 2017
MaeIII GTNAC 7 cut(s) 512, 791, 1453, 1495, 1676, 1918, 2334
MbiI CCGCTC 2 cut(s) 36, 886
MflI RGATCY 6 cut(s) 20, 194, 307, 1331, 1564, 2268
MhlI GDGCHC 2 cut(s) 13, 2073
MluCI AATT 7 cut(s) 457, 520, 1234, 1391, 1473, 2108, 2401
MlyI GAGTC 3 cut(s) 144, 290, 836
MmeI TCCRAC 5 cut(s) 258, 607, 1055, 1487, 2280
Mph1103I ATGCAT 4 cut(s) 1385, 1587, 1891, 2124
MroXI GAANNNNTTC 1 cut(s) 2185
MseI TTAA 5 cut(s) 404, 518, 2021, 2079, 2404
MslI CAYNNNNRTG 2 cut(s) 2056, 2127
MspI CCGG 1 cut(s) 1427
MspR9I CCNGG 2 cut(s) 1428, 1634
Mva1269I GAATGC 6 cut(s) 205, 225, 1023, 1385, 1891, 2161
MvaI CCWGG 1 cut(s) 1634
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 5 cut(s) 677, 1045, 1283, 1721, 1886
NciI CCSGG 1 cut(s) 1428
NlaIV GGNNCC 5 cut(s) 351, 1333, 1827, 2222, 2270
NmuCI GTSAC 3 cut(s) 512, 791, 2334
NsiI ATGCAT 4 cut(s) 1385, 1587, 1891, 2124
NspI RCATGY 4 cut(s) 248, 1387, 1496, 2291
NspV TTCGAA 3 cut(s) 53, 1654, 1883
PaeI GCATGC 1 cut(s) 1387
PaeR7I CTCGAG 1 cut(s) 303
PagI TCATGA 1 cut(s) 25
PciI ACATGT 1 cut(s) 2287
PcsI WCGNNNNNNNCGW 2 cut(s) 1297, 2221
PctI GAATGC 6 cut(s) 205, 225, 1023, 1385, 1891, 2161
PdmI GAANNNNTTC 1 cut(s) 2185
PfoI TCCNGGA 1 cut(s) 1632
PleI GAGTC 3 cut(s) 144, 289, 836
PpsI GAGTC 3 cut(s) 144, 289, 836
PscI ACATGT 1 cut(s) 2287
PsiI TTATAA 3 cut(s) 525, 1233, 1368
Psp124BI GAGCTC 1 cut(s) 2073
Psp6I CCWGG 1 cut(s) 1632
PspFI CCCAGC 1 cut(s) 1282
PspGI CCWGG 1 cut(s) 1632
PspN4I GGNNCC 5 cut(s) 351, 1333, 1827, 2222, 2270
PspPI GGNCC 2 cut(s) 1460, 2220
PstI CTGCAG 1 cut(s) 1879
PsuI RGATCY 6 cut(s) 20, 194, 307, 1331, 1564, 2268
RsaI GTAC 8 cut(s) 59, 169, 542, 583, 604, 1858, 1911, 1931
RsaNI GTAC 8 cut(s) 58, 168, 541, 582, 603, 1857, 1910, 1930
RseI CAYNNNNRTG 2 cut(s) 2056, 2127
SacI GAGCTC 1 cut(s) 2073
SaqAI TTAA 5 cut(s) 404, 518, 2021, 2079, 2404
Sau96I GGNCC 2 cut(s) 1460, 2220
ScaI AGTACT 1 cut(s) 604
SchI GAGTC 3 cut(s) 144, 290, 836
ScrFI CCNGG 2 cut(s) 1428, 1634
SduI GDGCHC 2 cut(s) 13, 2073
SfaNI GCATC 9 cut(s) 172, 457, 556, 604, 766, 853, 1251, 1430, 2109
SfcI CTRYAG 3 cut(s) 1647, 1818, 1875
Sfr274I CTCGAG 1 cut(s) 303
SfuI TTCGAA 3 cut(s) 53, 1654, 1883
SinI GGWCC 2 cut(s) 1460, 2220
SlaI CTCGAG 1 cut(s) 303
SmiMI CAYNNNNRTG 2 cut(s) 2056, 2127
SmlI CTYRAG 1 cut(s) 303
SmoI CTYRAG 1 cut(s) 303
SphI GCATGC 1 cut(s) 1387
Sse9I AATT 7 cut(s) 457, 520, 1234, 1391, 1473, 2108, 2401
SsiI CCGC 7 cut(s) 36, 95, 178, 185, 886, 1205, 2257
SstI GAGCTC 1 cut(s) 2073
StyD4I CCNGG 2 cut(s) 1426, 1632
StyI CCWWGG 3 cut(s) 294, 1336, 1949
TaaI ACNGT 9 cut(s) 359, 416, 797, 1269, 1533, 1651, 1676, 1822, 1929
TaiI ACGT 1 cut(s) 2020
TaqI TCGA 9 cut(s) 53, 148, 217, 304, 1097, 1654, 1788, 1883, 2215
TasI AATT 7 cut(s) 457, 520, 1234, 1391, 1473, 2108, 2401
TatI WGTACW 3 cut(s) 581, 602, 1929
TauI GCSGC 3 cut(s) 39, 97, 1208
Tru1I TTAA 5 cut(s) 404, 518, 2021, 2079, 2404
Tru9I TTAA 5 cut(s) 404, 518, 2021, 2079, 2404
TscAI CASTG 3 cut(s) 364, 901, 1827
TseFI GTSAC 3 cut(s) 512, 791, 2334
TseI GCWGC 9 cut(s) 91, 1249, 1277, 1297, 1724, 1755, 1758, 1874, 1877
Tsp45I GTSAC 3 cut(s) 512, 791, 2334
TspDTI ATGAA 7 cut(s) 42, 81, 1044, 1341, 1431, 2046, 2139
TspRI CASTG 3 cut(s) 364, 901, 1827
VneI GTGCAC 1 cut(s) 9
VpaK11BI GGWCC 2 cut(s) 1460, 2220
XapI RAATTY 1 cut(s) 1473
XceI RCATGY 4 cut(s) 248, 1387, 1496, 2291
XcmI CCANNNNNNNNNTGG 2 cut(s) 623, 1520
XhoI CTCGAG 1 cut(s) 303
XmnI GAANNNNTTC 1 cut(s) 2185
ZrmI AGTACT 1 cut(s) 604
Zsp2I ATGCAT 4 cut(s) 1385, 1587, 1891, 2124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.