Histone deacetylation protein Rxt3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08450 AT5G08450 AT5G08450 |
| fragaria_vesca | FvH4_1g25880 FvH4_1g25880 FvH4_1g25880 FvH4_1g25880 |
| malus_domestica | MD15G1140800.v1.1 |
| prunus_persica | Prupe.4G280600_v2.0.a1 Prupe.4G280600_v2.0.a1 Prupe.4G280600_v2.0.a1 Prupe.4G280600_v2.0.a1 Prupe.4G280600_v2.0.a1 Prupe.4G280600_v2.0.a1 |
| pyrus_communis | pycom15g12720 |
| rosa_chinensis | RchiOBHm_Chr3g0485021 |
| rosa_laevigata | RLG00000023175 |
| rosa_multiflora | Rmu_co8484793.1_g000001 Rmu_sc0006040.1_g000018 Rmu_sc0006040.1_g000019 Rmu_sc0039594.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00397250 |
| rosa_rugosa | Rorug03G0215200 Rorug03G0215200 |
| rosa_samantha | Rh3AG265600 Rh3BG301200 Rh3CG299500 Rh3DG295300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 139 |
| AclWI | GGATC | 2 cut(s) | 145, 158 |
| AflIII | ACRYGT | 1 cut(s) | 169 |
| AgsI | TTSAA | 1 cut(s) | 167 |
| Alw26I | GTCTC | 1 cut(s) | 108 |
| AlwI | GGATC | 2 cut(s) | 145, 158 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 2 cut(s) | 23, 68 |
| BamHI | GGATCC | 1 cut(s) | 150 |
| BccI | CCATC | 1 cut(s) | 93 |
| BcoDI | GTCTC | 1 cut(s) | 108 |
| BmiI | GGNNCC | 1 cut(s) | 152 |
| BmrI | ACTGGG | 1 cut(s) | 208 |
| BmuI | ACTGGG | 1 cut(s) | 208 |
| BsaI | GGTCTC | 1 cut(s) | 108 |
| Bse1I | ACTGG | 2 cut(s) | 203, 229 |
| Bse3DI | GCAATG | 1 cut(s) | 218 |
| BseGI | GGATG | 1 cut(s) | 211 |
| BseMI | GCAATG | 1 cut(s) | 218 |
| BseNI | ACTGG | 2 cut(s) | 203, 229 |
| BsmAI | GTCTC | 1 cut(s) | 108 |
| BsmI | GAATGC | 1 cut(s) | 43 |
| Bso31I | GGTCTC | 1 cut(s) | 108 |
| Bsp143I | GATC | 1 cut(s) | 150 |
| BspACI | CCGC | 1 cut(s) | 139 |
| BspLI | GGNNCC | 1 cut(s) | 152 |
| BspPI | GGATC | 2 cut(s) | 145, 158 |
| BspTNI | GGTCTC | 1 cut(s) | 108 |
| BsrDI | GCAATG | 1 cut(s) | 218 |
| BsrI | ACTGG | 2 cut(s) | 203, 229 |
| BssMI | GATC | 1 cut(s) | 150 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstF5I | GGATG | 1 cut(s) | 211 |
| BstKTI | GATC | 1 cut(s) | 153 |
| BstMAI | GTCTC | 1 cut(s) | 108 |
| BstMBI | GATC | 1 cut(s) | 150 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstX2I | RGATCY | 1 cut(s) | 150 |
| BstYI | RGATCY | 1 cut(s) | 150 |
| BtsCI | GGATG | 1 cut(s) | 211 |
| CviAII | CATG | 4 cut(s) | 5, 35, 136, 170 |
| DpnI | GATC | 1 cut(s) | 152 |
| DpnII | GATC | 1 cut(s) | 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco31I | GGTCTC | 1 cut(s) | 108 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 4 cut(s) | 8, 38, 139, 173 |
| FaiI | YATR | 5 cut(s) | 6, 36, 83, 137, 171 |
| FatI | CATG | 4 cut(s) | 4, 34, 135, 169 |
| FokI | GGATG | 1 cut(s) | 218 |
| Hin1II | CATG | 4 cut(s) | 8, 38, 139, 173 |
| HinfI | GANTC | 3 cut(s) | 25, 31, 68 |
| HphI | GGTGA | 2 cut(s) | 23, 68 |
| Hpy166II | GTNNAC | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 2 cut(s) | 30, 73 |
| Hpy188III | TCNNGA | 2 cut(s) | 105, 194 |
| Hpy8I | GTNNAC | 1 cut(s) | 59 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 211, 260, 268 |
| Hsp92II | CATG | 4 cut(s) | 8, 38, 139, 173 |
| Kzo9I | GATC | 1 cut(s) | 150 |
| LpnPI | CCDG | 4 cut(s) | 140, 184, 210, 225 |
| MaeIII | GTNAC | 1 cut(s) | 216 |
| MalI | GATC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 150 |
| MboII | GAAGA | 2 cut(s) | 34, 113 |
| MflI | RGATCY | 1 cut(s) | 150 |
| MluCI | AATT | 1 cut(s) | 283 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| MnlI | CCTC | 4 cut(s) | 129, 169, 178, 196 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 67 |
| MslI | CAYNNNNRTG | 1 cut(s) | 9 |
| Mva1269I | GAATGC | 1 cut(s) | 43 |
| NdeII | GATC | 1 cut(s) | 150 |
| NlaIII | CATG | 4 cut(s) | 8, 38, 139, 173 |
| NlaIV | GGNNCC | 1 cut(s) | 152 |
| NmuCI | GTSAC | 1 cut(s) | 216 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 173 |
| PciI | ACATGT | 1 cut(s) | 169 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 103 |
| PctI | GAATGC | 1 cut(s) | 43 |
| PdmI | GAANNNNTTC | 1 cut(s) | 67 |
| PfeI | GAWTC | 3 cut(s) | 25, 31, 68 |
| PscI | ACATGT | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 1 cut(s) | 152 |
| PsuI | RGATCY | 1 cut(s) | 150 |
| RseI | CAYNNNNRTG | 1 cut(s) | 9 |
| Sau3AI | GATC | 1 cut(s) | 150 |
| SetI | ASST | 4 cut(s) | 13, 121, 135, 180 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 9 |
| Sse9I | AATT | 1 cut(s) | 283 |
| SsiI | CCGC | 1 cut(s) | 139 |
| TaqI | TCGA | 2 cut(s) | 97, 106 |
| TasI | AATT | 1 cut(s) | 283 |
| TfiI | GAWTC | 3 cut(s) | 25, 31, 68 |
| TseFI | GTSAC | 1 cut(s) | 216 |
| Tsp45I | GTSAC | 1 cut(s) | 216 |
| TspDTI | ATGAA | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 173 |
| XmnI | GAANNNNTTC | 1 cut(s) | 67 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |