FvH4_1g25880

Histone deacetylation protein Rxt3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005647
Physical Location & Seq
Forward (+)
17783214 .. 17792571
9358 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25880.t4

Sequence Viewer

Length: 2406 bp
ATGAGTGGTGCACCAAAGAGATCTCATGAAGAGAGTGGCCATTCTTCCTCTTCAAAGTACCCTCACGAAGATTCAGGAGCATGCCCCAAGCTGCCGCCATCAGTTTCAAATGAGTATCATCAACCCTATGAGATGGGTCAAGATTCTCGACTAGCGAAGATTCCTCGTACAGAATCCCGTGATGCGGACAGAAGATCTCCCCTGCTTCCAGTATATCGAAGGCCATATGCTGCAATTGATTTGCCTGCAGATCCTCCTATTCCTTCTGAAAACAAGTTGGAGTCCAGAGATTCCAAGGAGACTCGAGATCTTCGGTTTGAGAACCGAGACAAAAAGACTGAGACGAGGGAACCATACAGTGAGGTAAGAAGGGATACTCCGAATGCGAAGGTTGAAAAGGATGTAAGACATGACAGTAGAGGGGATGATAATAAGGAGGTGAAATCTGAAAGGGAGAATTATAATGATGGTAAGGCTGACCTTAAAGCGGAAGGCTATGGTGTGGCAAGCAGTCACTTAAATTATAAAGAATCAAAAGAGTACCATAGAGGAAAAATATATTCCGATCCACCTGCAGGAAGTACAGATACCTGGCATCGCAATACTTCACAGAGCCATGTTGAGGTTGGAAAGGAAGCCCCCACTACTGAGGAGCGAGATCATGTAGAGGCACATGAGGCTGTTGGGGAGAACAGATATGATTCTAAAGGTGAGGATAAGTTCAAAGACAAGGATAGAAAAAGGAAAGACCTAAAGCACCGGGATTGGGGAGAAAGGGATAAGGAAAGAAGTGACCGTAGGAGCAATGTGCTTGTAGCTAACAGCAGTAGTGATTTCAAAGACTCAGCTAAGGAAGAAAGAGATTCAGAGAGGTGGGAGCCAGAGCGGAGGGATACTGCAAAAGCTAAGGAAATACTAAAAGAGAGGGAAAGGGATCATACCAAGAGAGATGCATGGAGTGGAGTAGAGAAAGATGGTTCAAATACGGAGAAGGAAGTGGGGGATGGGTCTATCAGAATGACAGAGCATGAAACACTTCCACCAGAGCAGAAGAAACAGAAAGATTTTGAAAGCTGGAGAACTGCTGATAGGGAATCAAGAGATAGGAGGAAAGAAAGAGATGTTGATGCTGAGGGAGATAGACCAGAAAAGCGCATGAGGACTTATGACAAAGAATTAGATGATGGATGTGCAGATGGTGAGGCAGCCACAGACAAAGAAAGGGAAGTTTATAGTTATGCGGTTCAGCAGCGTAAAAGGATGCAACGGTCAAGGGCTGCCCCGGCAAATCGGGAGCTGCGTTTTAGATCACATACACAAGACAATGAAGGATCCCAAGGTAAATCTGAAATATCTTCTGTCGTTTATAAAGTTGGTGAATGCATGCAAGAATTGATAAAGTTATGGAAAGAACATGAAGCATCTCATGGTGAAAAAAATGGTGAAACCTCTGTTACTGGTCCAACACTCGAAATTCGGATACCTTCTGAGCATGTTACAGCAACAAATCGCCAAGTTAGAGGCGGTCAGCTGTGGGGAACAGATATATACACAGATGATTCAGATCTTGTTGCTGTTCTTATGCATACAGGGTATTGCCGACCTACAGCGTCTCCTCCACCTTCTGCTATCCAGGAGTTGCGTGCTACAGTTCGCATACTACCTCCACAAGACTGTTACATTTCAACCTTGAGAAATAATGTTCGATCTCGTGCTTGGGGAGCTGCTATTGGTTGCAGCTATTGTGTTGAGCGCTGTTGCATTGTGAAGAAAGCGGGAGGAAGTATTGATCTTGAACCCTGTCTTACACATACTTCTACAGTGGAGCCTACTCTTGCTCCAGTTGTTGTTGAGCGTACGATGACTACAAGGGCTGCAGCTTCGAATGCATTGCGACAGCAAAGATTTGTTCGAGAAGTTACAATACAGTACAACCTCTGCAATGAACCTTGGATCAAGTATAGCATAAGTATTGTTGCTGACAAGGGTTTGAAGAAGACCCTATATACTTCTGCACGTTTAAAGAAGGGAGAAGTTCTCTATTTAGAAACGCATTCATGCAGGTATGAGCTCTGTTTTAATGGGGAGAAGATCATCAAAGCCAGTCAATTATCTCAGGTGCATGAAGGTGAGAATGAGAAGAATCAGAATCACACTTCAAATTCCACAAATGGTGAACGAAATGATTCTGAGAACACGGTAGTAGATGTATTTCGATGGTCTCGATGTAAAAAACCGCTTCCCCAGAAGGTCAAGCGGTCACTTGGGATCCCTCTTCCCCTTGAACATGTGGAGGTGTTGGAGGAAAATCTTGACTGGGAGGATGTGCAATGGTCACAGACTGGTGTTTGGATTGCTGGAAAAGAGTATTCACTTGCACGGGTGCATTTTCTGTCTGTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rxt3

Protein Analysis

802

Amino Acids

91.68

Weight (kDa)

6.62

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rxt3 PF08642 491 - 534 1.1e-11 Histone deacetylation protein Rxt3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 462, 525, 1368
AarI CACCTGC 1 cut(s) 580
Acc36I ACCTGC 2 cut(s) 580, 2052
AccBSI CCGCTC 1 cut(s) 886
AciI CCGC 9 cut(s) 95, 185, 488, 886, 1241, 1524, 1775, 2237, 2257
AclWI GGATC 8 cut(s) 245, 560, 942, 1326, 1339, 1961, 2263, 2276
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 2 cut(s) 1473, 2161
AfaI GTAC 6 cut(s) 59, 169, 542, 583, 1858, 1931
AfeI AGCGCT 1 cut(s) 1754
AfiI CCNNNNNNNGG 5 cut(s) 184, 487, 575, 622, 766
AflIII ACRYGT 1 cut(s) 2287
AjnI CCWGG 2 cut(s) 590, 1632
Alw21I GWGCWC 2 cut(s) 13, 2073
Alw26I GTCTC 5 cut(s) 293, 321, 335, 1617, 2226
Alw44I GTGCAC 1 cut(s) 9
AlwI GGATC 8 cut(s) 245, 560, 942, 1326, 1339, 1961, 2263, 2276
Ama87I CYCGRG 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 1754
AoxI GGCC 2 cut(s) 37, 221
ApaLI GTGCAC 1 cut(s) 9
ApoI RAATTY 2 cut(s) 1473, 2161
Asp700I GAANNNNTTC 2 cut(s) 1035, 2185
AspLEI GCGC 2 cut(s) 1155, 1755
AspS9I GGNCC 1 cut(s) 1460
AsuC2I CCSGG 2 cut(s) 761, 1283
AsuHPI GGTGA 8 cut(s) 451, 722, 1211, 1388, 1442, 1454, 2141, 2186
AsuII TTCGAA 1 cut(s) 1883
AvaI CYCGRG 1 cut(s) 303
AvaII GGWCC 1 cut(s) 1460
BaeGI GKGCMC 1 cut(s) 13
BalI TGGCCA 1 cut(s) 39
BamHI GGATCC 2 cut(s) 1331, 2268
BanII GRGCYC 1 cut(s) 2073
BarI GAAGNNNNNNTAC 4 cut(s) 571, 603, 1908, 1940
BauI CACGAG 1 cut(s) 1710
BbsI GAAGAC 1 cut(s) 2003
Bbv12I GWGCWC 2 cut(s) 13, 2073
BbvCI CCTCAGC 1 cut(s) 1131
BccI CCATC 8 cut(s) 106, 127, 461, 968, 998, 1178, 1190, 2211
BcgI CGANNNNNNTGC 4 cut(s) 554, 588, 1873, 1907
BciT130I CCWGG 2 cut(s) 592, 1634
BciVI GTATCC 3 cut(s) 367, 886, 1473
BcnI CCSGG 2 cut(s) 761, 1283
BcoDI GTCTC 5 cut(s) 293, 321, 335, 1617, 2226
BfaI CTAG 1 cut(s) 152
BfmI CTRYAG 6 cut(s) 246, 573, 1605, 1647, 1818, 1875
BfoI RGCGCY 1 cut(s) 1756
BfuAI ACCTGC 2 cut(s) 580, 2052
BfuI GTATCC 3 cut(s) 367, 886, 1473
BglII AGATCT 4 cut(s) 20, 194, 307, 1564
Bme1390I CCNGG 4 cut(s) 592, 761, 1283, 1634
Bme18I GGWCC 1 cut(s) 1460
BmeT110I CYCGRG 1 cut(s) 303
BmgT120I GGNCC 1 cut(s) 1460
BmiI GGNNCC 5 cut(s) 351, 879, 1333, 1827, 2270
BmrFI CCNGG 4 cut(s) 592, 761, 1283, 1634
BmrI ACTGGG 1 cut(s) 2326
BmsI GCATC 6 cut(s) 172, 604, 940, 1117, 1251, 1430
BmuI ACTGGG 1 cut(s) 2326
BpiI GAAGAC 1 cut(s) 2003
BplI GAGNNNNNCTC 2 cut(s) 2022, 2054
BpmI CTGGAG 2 cut(s) 1096, 1824
Bpu10I CCTNAGC 3 cut(s) 849, 906, 1131
Bpu14I TTCGAA 1 cut(s) 1883
BpuEI CTTGAG 1 cut(s) 1711
BpuMI CCSGG 2 cut(s) 761, 1283
BsaBI GATNNNNATC 1 cut(s) 1563
BsaI GGTCTC 1 cut(s) 2226
BsaJI CCNNGG 4 cut(s) 294, 1281, 1336, 1949
BsaXI ACNNNNNCTCC 4 cut(s) 1597, 1627, 1822, 1852
Bsc4I CCNNNNNNNGG 5 cut(s) 184, 487, 575, 622, 766
Bse1I ACTGG 6 cut(s) 209, 1462, 1841, 2103, 2321, 2347
Bse3DI GCAATG 4 cut(s) 811, 1889, 1948, 2336
Bse8I GATNNNNATC 1 cut(s) 1563
BseBI CCWGG 2 cut(s) 592, 1634
BseDI CCNNGG 4 cut(s) 294, 1281, 1336, 1949
BseGI GGATG 6 cut(s) 406, 430, 1009, 1193, 1266, 2329
BseJI GATNNNNATC 1 cut(s) 1563
BseLI CCNNNNNNNGG 5 cut(s) 184, 487, 575, 622, 766
BseMI GCAATG 4 cut(s) 811, 1889, 1948, 2336
BseMII CTCAG 7 cut(s) 330, 639, 858, 1122, 1479, 2129, 2181
BseNI ACTGG 6 cut(s) 209, 1462, 1841, 2103, 2321, 2347
BseRI GAGGAG 2 cut(s) 665, 1605
BseSI GKGCMC 1 cut(s) 13
BsgI GTGCAG 2 cut(s) 1212, 1998
BshFI GGCC 2 cut(s) 39, 223
BsiHKAI GWGCWC 2 cut(s) 13, 2073
BsiHKCI CYCGRG 1 cut(s) 303
BsiSI CCGG 2 cut(s) 760, 1283
BsiWI CGTACG 1 cut(s) 1856
BslI CCNNNNNNNGG 5 cut(s) 184, 487, 575, 622, 766
BsmAI GTCTC 5 cut(s) 293, 321, 335, 1617, 2226
BsmBI CGTCTC 2 cut(s) 335, 1617
BsmI GAATGC 4 cut(s) 388, 1385, 1891, 2053
BsnI GGCC 2 cut(s) 39, 223
Bso31I GGTCTC 1 cut(s) 2226
BsoBI CYCGRG 1 cut(s) 303
Bsp119I TTCGAA 1 cut(s) 1883
Bsp1286I GDGCHC 2 cut(s) 13, 2073
BspACI CCGC 9 cut(s) 95, 185, 488, 886, 1241, 1524, 1775, 2237, 2257
BspANI GGCC 2 cut(s) 39, 223
BspCNI CTCAG 7 cut(s) 331, 640, 857, 1123, 1480, 2128, 2182
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 5 cut(s) 351, 879, 1333, 1827, 2270
BspMAI CTGCAG 3 cut(s) 250, 577, 1879
BspMI ACCTGC 2 cut(s) 580, 2052
BspPI GGATC 8 cut(s) 245, 560, 942, 1326, 1339, 1961, 2263, 2276
BspT104I TTCGAA 1 cut(s) 1883
BspTNI GGTCTC 1 cut(s) 2226
BsrBI CCGCTC 1 cut(s) 886
BsrDI GCAATG 4 cut(s) 811, 1889, 1948, 2336
BsrI ACTGG 6 cut(s) 209, 1462, 1841, 2103, 2321, 2347
BssECI CCNNGG 4 cut(s) 294, 1281, 1336, 1949
BssSI CACGAG 1 cut(s) 1710
BssT1I CCWWGG 3 cut(s) 294, 1336, 1949
Bst2BI CACGAG 1 cut(s) 1710
Bst2UI CCWGG 2 cut(s) 592, 1634
Bst4CI ACNGT 9 cut(s) 359, 416, 797, 1269, 1651, 1676, 1822, 1929, 2200
Bst6I CTCTTC 3 cut(s) 24, 55, 2280
BstBI TTCGAA 1 cut(s) 1883
BstC8I GCNNGC 5 cut(s) 82, 246, 508, 1385, 1644
BstDEI CTNAG 9 cut(s) 339, 648, 844, 849, 906, 1131, 1488, 2115, 2190
BstF5I GGATG 6 cut(s) 406, 430, 1009, 1193, 1266, 2329
BstH2I RGCGCY 1 cut(s) 1756
BstHHI GCGC 2 cut(s) 1155, 1755
BstMAI GTCTC 5 cut(s) 293, 321, 335, 1617, 2226
BstMWI GCNNNNNNNGC 4 cut(s) 677, 1283, 1721, 1886
BstNI CCWGG 2 cut(s) 592, 1634
BstNSI RCATGY 4 cut(s) 84, 1387, 1496, 2291
BstSCI CCNGG 4 cut(s) 590, 759, 1281, 1632
BstSFI CTRYAG 6 cut(s) 246, 573, 1605, 1647, 1818, 1875
BstSLI GKGCMC 1 cut(s) 13
BstV2I GAAGAC 1 cut(s) 2003
BstX2I RGATCY 7 cut(s) 20, 194, 250, 307, 1331, 1564, 2268
BstYI RGATCY 7 cut(s) 20, 194, 250, 307, 1331, 1564, 2268
BsuI GTATCC 3 cut(s) 367, 886, 1473
BsuRI GGCC 2 cut(s) 39, 223
BtgZI GCGATG 1 cut(s) 581
BtsCI GGATG 6 cut(s) 406, 430, 1009, 1193, 1266, 2329
BtsIMutI CAGTG 2 cut(s) 364, 1827
BveI ACCTGC 2 cut(s) 580, 2052
Cac8I GCNNGC 5 cut(s) 82, 246, 508, 1385, 1644
CciI TCATGA 1 cut(s) 25
CfoI GCGC 2 cut(s) 1155, 1755
Cfr13I GGNCC 1 cut(s) 1460
CseI GACGC 1 cut(s) 1599
Csp6I GTAC 6 cut(s) 58, 168, 541, 582, 1857, 1930
CviQI GTAC 6 cut(s) 58, 168, 541, 582, 1857, 1930
DdeI CTNAG 9 cut(s) 339, 648, 844, 849, 906, 1131, 1488, 2115, 2190
DraI TTTAAA 1 cut(s) 2022
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 3 cut(s) 24, 55, 2280
EarI CTCTTC 3 cut(s) 24, 55, 2280
Ecl136II GAGCTC 1 cut(s) 2071
Eco130I CCWWGG 3 cut(s) 294, 1336, 1949
Eco24I GRGCYC 1 cut(s) 2073
Eco31I GGTCTC 1 cut(s) 2226
Eco47I GGWCC 1 cut(s) 1460
Eco47III AGCGCT 1 cut(s) 1754
Eco53kI GAGCTC 1 cut(s) 2071
Eco88I CYCGRG 1 cut(s) 303
EcoICRI GAGCTC 1 cut(s) 2071
EcoRII CCWGG 2 cut(s) 590, 1632
EcoT14I CCWWGG 3 cut(s) 294, 1336, 1949
EcoT22I ATGCAT 4 cut(s) 955, 1385, 1587, 1891
EcoT38I GRGCYC 1 cut(s) 2073
ErhI CCWWGG 3 cut(s) 294, 1336, 1949
Esp3I CGTCTC 2 cut(s) 335, 1617
FauI CCCGC 1 cut(s) 1768
FauNDI CATATG 1 cut(s) 226
FokI GGATG 6 cut(s) 413, 437, 1016, 1200, 1273, 2336
FriOI GRGCYC 1 cut(s) 2073
FspBI CTAG 1 cut(s) 152
GlaI GCGC 2 cut(s) 1154, 1754
GsuI CTGGAG 2 cut(s) 1096, 1824
HaeII RGCGCY 1 cut(s) 1756
HaeIII GGCC 2 cut(s) 39, 223
HapII CCGG 2 cut(s) 760, 1283
HgaI GACGC 1 cut(s) 1599
HhaI GCGC 2 cut(s) 1155, 1755
Hin6I GCGC 2 cut(s) 1153, 1753
HinP1I GCGC 2 cut(s) 1153, 1753
HpaII CCGG 2 cut(s) 760, 1283
HphI GGTGA 8 cut(s) 451, 722, 1211, 1388, 1442, 1454, 2141, 2186
Hpy166II GTNNAC 2 cut(s) 11, 2177
Hpy8I GTNNAC 2 cut(s) 11, 2177
HpyCH4III ACNGT 9 cut(s) 359, 416, 797, 1269, 1651, 1676, 1822, 1929, 2200
HpyCH4IV ACGT 1 cut(s) 2017
HpyF10VI GCNNNNNNNGC 4 cut(s) 677, 1283, 1721, 1886
HpyF3I CTNAG 9 cut(s) 339, 648, 844, 849, 906, 1131, 1488, 2115, 2190
HpySE526I ACGT 1 cut(s) 2017
HspAI GCGC 2 cut(s) 1153, 1753
LmnI GCTCC 8 cut(s) 77, 652, 801, 877, 1294, 1721, 1825, 1843
LweI GCATC 6 cut(s) 172, 604, 940, 1117, 1251, 1430
MaeI CTAG 1 cut(s) 152
MaeII ACGT 1 cut(s) 2017
MaeIII GTNAC 8 cut(s) 512, 791, 1453, 1495, 1676, 1918, 2259, 2334
MbiI CCGCTC 1 cut(s) 886
MfeI CAATTG 1 cut(s) 234
MflI RGATCY 7 cut(s) 20, 194, 250, 307, 1331, 1564, 2268
MhlI GDGCHC 2 cut(s) 13, 2073
MlsI TGGCCA 1 cut(s) 39
MluCI AATT 9 cut(s) 234, 457, 520, 1175, 1391, 1473, 2108, 2161, 2401
MluNI TGGCCA 1 cut(s) 39
MlyI GAGTC 3 cut(s) 290, 295, 836
MmeI TCCRAC 4 cut(s) 258, 607, 1487, 2280
Mox20I TGGCCA 1 cut(s) 39
Mph1103I ATGCAT 4 cut(s) 955, 1385, 1587, 1891
MroXI GAANNNNTTC 2 cut(s) 1035, 2185
MscI TGGCCA 1 cut(s) 39
MseI TTAA 4 cut(s) 483, 518, 2021, 2079
MslI CAYNNNNRTG 1 cut(s) 2127
Msp20I TGGCCA 1 cut(s) 39
MspA1I CMGCKG 1 cut(s) 1531
MspI CCGG 2 cut(s) 760, 1283
MspR9I CCNGG 4 cut(s) 592, 761, 1283, 1634
MunI CAATTG 1 cut(s) 234
Mva1269I GAATGC 4 cut(s) 388, 1385, 1891, 2053
MvaI CCWGG 2 cut(s) 592, 1634
MwoI GCNNNNNNNGC 4 cut(s) 677, 1283, 1721, 1886
NciI CCSGG 2 cut(s) 761, 1283
NdeI CATATG 1 cut(s) 226
NlaIV GGNNCC 5 cut(s) 351, 879, 1333, 1827, 2270
NmuCI GTSAC 4 cut(s) 512, 791, 2259, 2334
NsiI ATGCAT 4 cut(s) 955, 1385, 1587, 1891
NspI RCATGY 4 cut(s) 84, 1387, 1496, 2291
NspV TTCGAA 1 cut(s) 1883
PaeI GCATGC 2 cut(s) 84, 1387
PaeR7I CTCGAG 1 cut(s) 303
PagI TCATGA 1 cut(s) 25
PaqCI CACCTGC 1 cut(s) 580
PciI ACATGT 1 cut(s) 2287
PcsI WCGNNNNNNNCGW 2 cut(s) 1297, 2221
PctI GAATGC 4 cut(s) 388, 1385, 1891, 2053
PdmI GAANNNNTTC 2 cut(s) 1035, 2185
Pfl23II CGTACG 1 cut(s) 1856
PfoI TCCNGGA 1 cut(s) 1632
PleI GAGTC 3 cut(s) 289, 295, 836
PpsI GAGTC 3 cut(s) 289, 295, 836
PscI ACATGT 1 cut(s) 2287
PsiI TTATAA 3 cut(s) 462, 525, 1368
Psp124BI GAGCTC 1 cut(s) 2073
Psp6I CCWGG 2 cut(s) 590, 1632
PspGI CCWGG 2 cut(s) 590, 1632
PspLI CGTACG 1 cut(s) 1856
PspN4I GGNNCC 5 cut(s) 351, 879, 1333, 1827, 2270
PspPI GGNCC 1 cut(s) 1460
PstI CTGCAG 3 cut(s) 250, 577, 1879
PsuI RGATCY 7 cut(s) 20, 194, 250, 307, 1331, 1564, 2268
PvuII CAGCTG 1 cut(s) 1531
RsaI GTAC 6 cut(s) 59, 169, 542, 583, 1858, 1931
RsaNI GTAC 6 cut(s) 58, 168, 541, 582, 1857, 1930
RseI CAYNNNNRTG 1 cut(s) 2127
SacI GAGCTC 1 cut(s) 2073
SaqAI TTAA 4 cut(s) 483, 518, 2021, 2079
Sau96I GGNCC 1 cut(s) 1460
SbfI CCTGCAGG 1 cut(s) 577
SchI GAGTC 3 cut(s) 290, 295, 836
ScrFI CCNGG 4 cut(s) 592, 761, 1283, 1634
SdaI CCTGCAGG 1 cut(s) 577
SduI GDGCHC 2 cut(s) 13, 2073
SfaNI GCATC 6 cut(s) 172, 604, 940, 1117, 1251, 1430
SfcI CTRYAG 6 cut(s) 246, 573, 1605, 1647, 1818, 1875
Sfr274I CTCGAG 1 cut(s) 303
SfuI TTCGAA 1 cut(s) 1883
SinI GGWCC 1 cut(s) 1460
SlaI CTCGAG 1 cut(s) 303
SmiMI CAYNNNNRTG 1 cut(s) 2127
SmlI CTYRAG 2 cut(s) 303, 1690
SmoI CTYRAG 2 cut(s) 303, 1690
SphI GCATGC 2 cut(s) 84, 1387
Sse8387I CCTGCAGG 1 cut(s) 577
Sse9I AATT 9 cut(s) 234, 457, 520, 1175, 1391, 1473, 2108, 2161, 2401
SsiI CCGC 9 cut(s) 95, 185, 488, 886, 1241, 1524, 1775, 2237, 2257
SspMI CTAG 1 cut(s) 152
SstI GAGCTC 1 cut(s) 2073
StyD4I CCNGG 4 cut(s) 590, 759, 1281, 1632
StyI CCWWGG 3 cut(s) 294, 1336, 1949
TaaI ACNGT 9 cut(s) 359, 416, 797, 1269, 1651, 1676, 1822, 1929, 2200
TaiI ACGT 1 cut(s) 2020
TaqI TCGA 9 cut(s) 148, 217, 304, 1470, 1705, 1883, 1912, 2215, 2224
TasI AATT 9 cut(s) 234, 457, 520, 1175, 1391, 1473, 2108, 2161, 2401
TatI WGTACW 2 cut(s) 581, 1929
TauI GCSGC 1 cut(s) 97
Tru1I TTAA 4 cut(s) 483, 518, 2021, 2079
Tru9I TTAA 4 cut(s) 483, 518, 2021, 2079
TscAI CASTG 2 cut(s) 364, 1827
TseFI GTSAC 4 cut(s) 512, 791, 2259, 2334
Tsp45I GTSAC 4 cut(s) 512, 791, 2259, 2334
TspDTI ATGAA 7 cut(s) 42, 1044, 1341, 1431, 1959, 2046, 2139
TspGWI ACGGA 1 cut(s) 1001
TspRI CASTG 2 cut(s) 364, 1827
VneI GTGCAC 1 cut(s) 9
VpaK11BI GGWCC 1 cut(s) 1460
XapI RAATTY 2 cut(s) 1473, 2161
XceI RCATGY 4 cut(s) 84, 1387, 1496, 2291
XcmI CCANNNNNNNNNTGG 1 cut(s) 623
XhoI CTCGAG 1 cut(s) 303
XmnI GAANNNNTTC 2 cut(s) 1035, 2185
XspI CTAG 1 cut(s) 152
Zsp2I ATGCAT 4 cut(s) 955, 1385, 1587, 1891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.