Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008664

Physical Location & Seq

Genomic Coordinates Reverse (-)

2743330 .. 2748019

Gene Structure 4690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G08490.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGGGCCCTTTACGGCAATTTGTTCAGAATTTCAGACTTTTGTCTGGTTTTGGAACTGATCACAGGGTTTTTCTGGATGTTGTCAAAGCTTGTGCTTCAGTGTCTGATCTCACATCAGGGAGGGCTCTGCACGGTTGCGTGTTCAAGCTTGGTCATATAGCCTGCTCTGAGGTTTCGAAGTCAGTTCTTAACATGTATGCGAAATGCAGGAGAATGGATGATTGCCAGAAGATGTTTAGGCAAATGGACAGTCTTGATCCTGTTGTTTGGAATATTGTTCTGACTGGACTTTCTGTTTCTTGCGGTCGTGAAACGATGAGGTTTTTCAAAGCAATGCACTTTGCAGATGAACCTAAGCCGAGCTCTGTTACCTTTGCGATTGTTCTTCCTTTGTGTGTTCGCCTTGGGGATTCATACAATGGGAAGAGTATGCATTCTTATATTATTAAAGCCGGTTTGGAGAAAGATACACTTGTGGGGAATGCTTTGGTTTCCATGTATGCCAAATTTGGTTTTATTTTTCCCGATGCTTATACTGCATTTGATGGTATAGCTGATAAAGATGTTGTCTCTTGGAATGCGATTATTGCTGGGTTTTCTGAGAATAATATGATGGCTGATGCATTTAGATCGTTTTGTCTAATGCTGAAGGAACCTACAGAGCCAAATTATGCAACAATTGCAAATGTTTTGCCTGTTTGCGCTTCTATGGACAAGAACATTGCATGTCGAAGTGGTAGACAGATTCACAGTTATGTTGTGCAGAGGTCTTGGCTGCAAACCCATGTTTTTGTATGTAATTCACTTGTTAGTTTCTATTTGAGAGTCGGAAGGATAGAAGAAGCAGCCTCATTGTTTACCAGGATGGGTTCTAAAGATCTAGTTTCATGGAATGTTGTCATAGCTGGTTATGCATCAAATTGTGAGTGGTTTAAAGCATTTCAGTTATTTCACAACTTGGTGCATAAGGGGGATGTTTCTCCTGATTCGGTAACTATTATCAGTATCCTTCCTGTCTGTGCGCAATTAACTGACTTGGCCTCTGGGAAAGAGATCCACAGTTATATATTGCGCCATTCTTACCTTTTGGAGGATACATCAGTTGGGAATGCTCTCATTAGTTTCTATGCAAGATTTGGTGACACAAGTGCAGCATATTGGGCCTTTTCACTGATGTCCACGAAGGATATAATATCTTGGAATGCTATACTTGATGCCTTTGCAGACAGTCCAAAGCAGTTTCAATTTTTGAATCTCTTGCACCACTTACTTAATGAAGCAATCACTCTTGACTCTGTTACTATTTTAAGCCTACTAAAGTTTTGCATAAATGTACAGGGAATTGGTAAAGTAAAAGAAGTTCATGGGTACTCAGTTAAGGCTGGTCTTTTACACGATGAAGAGGAACCCAAGCTTGGCAATGCATTGCTTGATGCATATGCCAAATGTGGTAATGTTGAATACGCTCATAAGATTTTTCTGGGTTTATCAGAGAGGAGAACTTTGGTTTCCTATAACTCATTGTTATCAGGATATGTTAATAGTGGAAGTCATGATGATGCTCAGATGCTCTTCACTGAGATGTCTACTACTGATCTCACCACTTGGAGTTTGATGGTTCGTATCTATGCTGAAAGTTGTTGCCCTAATGAAGCCATTGGTGTTTTCCGTGAGATTCAAGCTCGAGGAATGAGGCCTAACACTGTGACTATCATGAATCTCCTTCCTGTTTGTGCGCAGCTAGCCTCTCTGCATCTAGTAAGACAATGTCATGGATATATTATTAGAGGCGGACTTGGTGATATCCGCCTGAAGGGGACTCTACTAGATGTATATGCTAAATGTGGCAGCTTGAAGCATGCATATTCTGTCTTCCAGTCAGATGCTCGTAGAGATCTGGTTATGTTCACTGCTATGGTAGCTGGGTATGCTGTACATGGTAGGGGCAAGGAAGCACTTATGATCTACTCTCATATGACTGAATCAAACATAAAGCCCGATCATGTTTTCATAACTACTATGTTGACTGCATGCTGTCATGCAGGGTTAATACAGGATGGATTGCAAATATATGACTCAATAAGGACAGTTCACGGTATGAAACCTACAATGGAACAATATGCTTGTGCTGTAGATCTAATTGCTCGAGGGGGTCGACTTGATGATGCATATTCTTTTGTCACACAGATGCCAGTTGAACCTAATGCAAATATATGGGGAACACTGTTAAGGGCGTGTACAACCTATAATAGGATGGATCTGGGGCACTCAGTTGCAAATCATCTCTTGCAAGCTGAATCTGACGACACCGGAAACCACGTTCTAATATCGAATATGTATGCTGCAGATGCTAAATGGGAAGGCGTGATGGAGTTGAGAAACCTAATGAAGAAAAAGGAAATGAAAAAGCCAGCGGGATGTAGCTGGCTAGAAGTGGATGGGCAAAGGAATGTCTTTGTGTCTGGAGATTGTTCTCACCCTCGTAGAGACAGTATTTTTGACTTAGTAAATGCTTTATATCTTCAGATGAAAGAGCCTGTGGTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009451 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1900864 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

849

Amino Acids

94.49

Weight (kDa)

6.98

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	187 - 227	3e-07	PPR repeat family
PPR_2	PF13041	293 - 340	3e-06	PPR repeat family
PPR_2	PF13041	632 - 680	1e-08	PPR repeat family
E_motif	PF20431	749 - 811	1.4e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490
fragaria_vesca	FvH4_1g29890 FvH4_1g29890 FvH4_1g29890
malus_domestica	MD02G1212500.v1.1
prunus_persica	Prupe.3G127300_v2.0.a1
pyrus_communis	pycom02g17620
rosa_laevigata	RLG00000022567
rosa_multiflora	Rmu_sc0005781.1_g000010
rosa_roxburghii	Rroxscaffold_6G00389610
rosa_rugosa	Rorug03G0279300
rosa_samantha	Rh3AG326200 Rh3BG362500 Rh3CG358600 Rh3DG361900
rosa_wichuraiana	Rw3G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1023, 1737
AccI	GTMKAC	3 cut(s)	739, 1586, 2155
AciI	CCGC	4 cut(s)	303, 1791, 1807, 2414
AclWI	GGATC	3 cut(s)	251, 1048, 2265
AcsI	RAATTY	2 cut(s)	28, 506
AcuI	CTGAAG	4 cut(s)	81, 668, 1832, 2507
AfaI	GTAC	4 cut(s)	1335, 1370, 1935, 2239
AfiI	CCNNNNNNNGG	4 cut(s)	1090, 1415, 1813, 2250
AflIII	ACRYGT	1 cut(s)	192
AgsI	TTSAA	8 cut(s)	145, 328, 1244, 1252, 1460, 1679, 1855, 2198
AjnI	CCWGG	1 cut(s)	860
AjuI	GAANNNNNNNTTGG	2 cut(s)	1398, 1430
AloI	GAACNNNNNNTCC	2 cut(s)	2304, 2336
Alw21I	GWGCWC	1 cut(s)	365
Alw26I	GTCTC	2 cut(s)	574, 2481
AlwI	GGATC	3 cut(s)	251, 1048, 2265
AlwNI	CAGNNNCTG	1 cut(s)	104
Ama87I	CYCGRG	2 cut(s)	1683, 2145
AoxI	GGCC	4 cut(s)	4, 1038, 1161, 1694
ApaI	GGGCCC	1 cut(s)	8
ApeKI	GCWGC	6 cut(s)	775, 845, 1151, 1738, 1848, 2342
ApoI	RAATTY	2 cut(s)	28, 506
ArsI	GACNNNNNNTTYG	4 cut(s)	235, 267, 2480, 2512
AspLEI	GCGC	4 cut(s)	704, 1024, 1074, 1738
AspS9I	GGNCC	3 cut(s)	4, 5, 1161
AsuHPI	GGTGA	4 cut(s)	1151, 1591, 1811, 2468
AsuII	TTCGAA	1 cut(s)	176
AsuNHI	GCTAGC	1 cut(s)	1741
AvaI	CYCGRG	2 cut(s)	1683, 2145
BaeGI	GKGCMC	2 cut(s)	8, 2268
BaeI	ACNNNNGTAYC	4 cut(s)	459, 492, 1086, 1119
BanII	GRGCYC	3 cut(s)	8, 127, 365
BbsI	GAAGAC	1 cut(s)	1864
Bbv12I	GWGCWC	1 cut(s)	365
BbvI	GCAGC	6 cut(s)	762, 857, 1163, 1750, 1860, 2329
BccI	CCATC	8 cut(s)	539, 607, 859, 1609, 2051, 2248, 2362, 2432
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	612, 646
BciT130I	CCWGG	1 cut(s)	862
BciVI	GTATCC	2 cut(s)	1016, 1087
BclI	TGATCA	1 cut(s)	58
BcoDI	GTCTC	2 cut(s)	574, 2481
BfaI	CTAG	5 cut(s)	881, 1742, 1757, 1826, 2429
BfmI	CTRYAG	3 cut(s)	657, 2130, 2343
BfuI	GTATCC	2 cut(s)	1016, 1087
BglII	AGATCT	3 cut(s)	877, 1894, 2134
BisI	GCNGC	6 cut(s)	776, 846, 1152, 1739, 1849, 2343
BlsI	GCNGC	6 cut(s)	777, 847, 1153, 1740, 1850, 2344
Bme1390I	CCNGG	1 cut(s)	862
BmeT110I	CYCGRG	2 cut(s)	1683, 2145
BmgT120I	GGNCC	3 cut(s)	4, 5, 1161
BmiI	GGNNCC	3 cut(s)	6, 654, 1407
BmrFI	CCNGG	1 cut(s)	862
BmtI	GCTAGC	1 cut(s)	1745
BoxI	GACNNNNGTC	1 cut(s)	40
BpiI	GAAGAC	1 cut(s)	1864
BpmI	CTGGAG	1 cut(s)	2484
Bpu10I	CCTNAGC	1 cut(s)	354
Bpu14I	TTCGAA	1 cut(s)	176
BsaJI	CCNNGG	1 cut(s)	403
BsaWI	WCCGGW	1 cut(s)	2309
Bsc4I	CCNNNNNNNGG	4 cut(s)	1090, 1415, 1813, 2250
Bse118I	RCCGGY	1 cut(s)	452
Bse1I	ACTGG	3 cut(s)	289, 1876, 2192
Bse3DI	GCAATG	4 cut(s)	339, 720, 1424, 1426
BseBI	CCWGG	1 cut(s)	862
BseDI	CCNNGG	1 cut(s)	403
BseGI	GGATG	8 cut(s)	82, 223, 870, 979, 2062, 2259, 2423, 2443
BseLI	CCNNNNNNNGG	4 cut(s)	1090, 1415, 1813, 2250
BseMI	GCAATG	4 cut(s)	339, 720, 1424, 1426
BseMII	CTCAG	6 cut(s)	159, 591, 1386, 1569, 1577, 2283
BseNI	ACTGG	3 cut(s)	289, 1876, 2192
BseRI	GAGGAG	1 cut(s)	1510
BseSI	GKGCMC	2 cut(s)	8, 2268
BseXI	GCAGC	6 cut(s)	762, 857, 1163, 1750, 1860, 2329
BseYI	CCCAGC	2 cut(s)	590, 1922
BsgI	GTGCAG	3 cut(s)	113, 782, 1170
Bsh1285I	CGRYCG	1 cut(s)	307
BshFI	GGCC	4 cut(s)	6, 1040, 1163, 1696
BsiEI	CGRYCG	1 cut(s)	307
BsiHKAI	GWGCWC	1 cut(s)	365
BsiHKCI	CYCGRG	2 cut(s)	1683, 2145
BsiSI	CCGG	2 cut(s)	453, 2310
BslFI	GGGAC	1 cut(s)	1831
BslI	CCNNNNNNNGG	4 cut(s)	1090, 1415, 1813, 2250
BsmAI	GTCTC	2 cut(s)	574, 2481
BsmFI	GGGAC	1 cut(s)	1831
BsmI	GAATGC	5 cut(s)	433, 487, 583, 1114, 1207
BsnI	GGCC	4 cut(s)	6, 1040, 1163, 1696
BsoBI	CYCGRG	2 cut(s)	1683, 2145
Bsp119I	TTCGAA	1 cut(s)	176
Bsp120I	GGGCCC	1 cut(s)	4
Bsp1286I	GDGCHC	4 cut(s)	8, 127, 365, 2268
Bsp1407I	TGTACA	3 cut(s)	1333, 1933, 2237
BspACI	CCGC	4 cut(s)	303, 1791, 1807, 2414
BspANI	GGCC	4 cut(s)	6, 1040, 1163, 1696
BspCNI	CTCAG	6 cut(s)	160, 592, 1385, 1570, 1576, 2282
BspHI	TCATGA	2 cut(s)	1552, 1713
BspLI	GGNNCC	3 cut(s)	6, 654, 1407
BspMAI	CTGCAG	1 cut(s)	2347
BspOI	GCTAGC	1 cut(s)	1745
BspPI	GGATC	3 cut(s)	251, 1048, 2265
BspQI	GCTCTTC	1 cut(s)	1577
BspT104I	TTCGAA	1 cut(s)	176
BsrDI	GCAATG	4 cut(s)	339, 720, 1424, 1426
BsrFI	RCCGGY	1 cut(s)	452
BsrGI	TGTACA	3 cut(s)	1333, 1933, 2237
BsrI	ACTGG	3 cut(s)	289, 1876, 2192
BssAI	RCCGGY	1 cut(s)	452
BssECI	CCNNGG	1 cut(s)	403
BssT1I	CCWWGG	1 cut(s)	403
Bst2UI	CCWGG	1 cut(s)	862
Bst6I	CTCTTC	3 cut(s)	419, 1395, 1577
BstAPI	GCANNNNNTGC	1 cut(s)	680
BstAUI	TGTACA	3 cut(s)	1333, 1933, 2237
BstBI	TTCGAA	1 cut(s)	176
BstC8I	GCNNGC	7 cut(s)	163, 1743, 1860, 2032, 2292, 2412, 2426
BstDEI	CTNAG	8 cut(s)	168, 354, 600, 1372, 1563, 1578, 2269, 2503
BstENI	CCTNNNNNAGG	2 cut(s)	1088, 2248
BstF5I	GGATG	8 cut(s)	82, 223, 870, 979, 2062, 2259, 2423, 2443
BstHHI	GCGC	4 cut(s)	704, 1024, 1074, 1738
BstMAI	GTCTC	2 cut(s)	574, 2481
BstMCI	CGRYCG	1 cut(s)	307
BstMWI	GCNNNNNNNGC	9 cut(s)	536, 587, 680, 911, 1160, 1742, 1919, 1928, 2348
BstNI	CCWGG	1 cut(s)	862
BstNSI	RCATGY	4 cut(s)	196, 729, 1862, 2034
BstPAI	GACNNNNGTC	1 cut(s)	40
BstSCI	CCNGG	1 cut(s)	860
BstSFI	CTRYAG	3 cut(s)	657, 2130, 2343
BstSLI	GKGCMC	2 cut(s)	8, 2268
BstV1I	GCAGC	6 cut(s)	762, 857, 1163, 1750, 1860, 2329
BstV2I	GAAGAC	1 cut(s)	1864
BstX2I	RGATCY	5 cut(s)	877, 1053, 1894, 2134, 2257
BstYI	RGATCY	5 cut(s)	877, 1053, 1894, 2134, 2257
BsuI	GTATCC	2 cut(s)	1016, 1087
BsuRI	GGCC	4 cut(s)	6, 1040, 1163, 1696
BtsCI	GGATG	8 cut(s)	82, 223, 870, 979, 2062, 2259, 2423, 2443
BtsI	GCAGTG	1 cut(s)	1908
BtsIMutI	CAGTG	6 cut(s)	105, 1169, 1575, 1701, 1908, 2222
Cac8I	GCNNGC	7 cut(s)	163, 1743, 1860, 2032, 2292, 2412, 2426
CaiI	CAGNNNCTG	1 cut(s)	104
CciI	TCATGA	2 cut(s)	1552, 1713
CfoI	GCGC	4 cut(s)	704, 1024, 1074, 1738
Cfr10I	RCCGGY	1 cut(s)	452
Cfr13I	GGNCC	3 cut(s)	4, 5, 1161
Csp6I	GTAC	4 cut(s)	1334, 1369, 1934, 2238
CviQI	GTAC	4 cut(s)	1334, 1369, 1934, 2238
DdeI	CTNAG	8 cut(s)	168, 354, 600, 1372, 1563, 1578, 2269, 2503
DraI	TTTAAA	1 cut(s)	934
Eam1104I	CTCTTC	3 cut(s)	419, 1395, 1577
EarI	CTCTTC	3 cut(s)	419, 1395, 1577
EciI	GGCGGA	2 cut(s)	1796, 1806
Ecl136II	GAGCTC	1 cut(s)	363
Eco130I	CCWWGG	1 cut(s)	403
Eco147I	AGGCCT	1 cut(s)	1696
Eco24I	GRGCYC	3 cut(s)	8, 127, 365
Eco32I	GATATC	1 cut(s)	1804
Eco53kI	GAGCTC	1 cut(s)	363
Eco57I	CTGAAG	4 cut(s)	81, 668, 1832, 2507
Eco88I	CYCGRG	2 cut(s)	1683, 2145
EcoICRI	GAGCTC	1 cut(s)	363
EcoNI	CCTNNNNNAGG	2 cut(s)	1088, 2248
EcoO109I	RGGNCCY	1 cut(s)	5
EcoRII	CCWGG	1 cut(s)	860
EcoRV	GATATC	1 cut(s)	1804
EcoT14I	CCWWGG	1 cut(s)	403
EcoT22I	ATGCAT	7 cut(s)	435, 625, 916, 1426, 1438, 1864, 2170
EcoT38I	GRGCYC	3 cut(s)	8, 127, 365
ErhI	CCWWGG	1 cut(s)	403
FalI	AAGNNNNNCTT	2 cut(s)	456, 488
FaqI	GGGAC	1 cut(s)	1831
FauI	CCCGC	1 cut(s)	2407
FauNDI	CATATG	2 cut(s)	1438, 1974
FbaI	TGATCA	1 cut(s)	58
FblI	GTMKAC	3 cut(s)	739, 1586, 2155
Fnu4HI	GCNGC	6 cut(s)	776, 846, 1152, 1739, 1849, 2343
FokI	GGATG	8 cut(s)	89, 230, 877, 986, 2069, 2266, 2430, 2450
FriOI	GRGCYC	3 cut(s)	8, 127, 365
Fsp4HI	GCNGC	6 cut(s)	776, 846, 1152, 1739, 1849, 2343
FspBI	CTAG	5 cut(s)	881, 1742, 1757, 1826, 2429
FspI	TGCGCA	2 cut(s)	1023, 1737
GlaI	GCGC	4 cut(s)	703, 1023, 1073, 1737
GluI	GCNGC	6 cut(s)	776, 846, 1152, 1739, 1849, 2343
GsaI	CCCAGC	2 cut(s)	594, 1926
GsuI	CTGGAG	1 cut(s)	2484
HaeIII	GGCC	4 cut(s)	6, 1040, 1163, 1696
HapII	CCGG	2 cut(s)	453, 2310
HhaI	GCGC	4 cut(s)	704, 1024, 1074, 1738
Hin6I	GCGC	4 cut(s)	702, 1022, 1072, 1736
HinP1I	GCGC	4 cut(s)	702, 1022, 1072, 1736
HincII	GTYRAC	2 cut(s)	2025, 2156
HindII	GTYRAC	2 cut(s)	2025, 2156
HindIII	AAGCTT	3 cut(s)	87, 146, 1412
HpaII	CCGG	2 cut(s)	453, 2310
HphI	GGTGA	4 cut(s)	1151, 1591, 1811, 2468
Hpy166II	GTNNAC	9 cut(s)	740, 858, 1179, 1587, 1908, 2025, 2092, 2156, 2238
Hpy8I	GTNNAC	9 cut(s)	740, 858, 1179, 1587, 1908, 2025, 2092, 2156, 2238
HpyAV	CCTTC	7 cut(s)	643, 825, 1019, 1177, 1733, 1807, 2354
HpyCH4IV	ACGT	1 cut(s)	2319
HpyF10VI	GCNNNNNNNGC	9 cut(s)	536, 587, 680, 911, 1160, 1742, 1919, 1928, 2348
HpyF3I	CTNAG	8 cut(s)	168, 354, 600, 1372, 1563, 1578, 2269, 2503
HpySE526I	ACGT	1 cut(s)	2319
HspAI	GCGC	4 cut(s)	702, 1022, 1072, 1736
Ksp22I	TGATCA	1 cut(s)	58
LguI	GCTCTTC	1 cut(s)	1577
Lsp1109I	GCAGC	6 cut(s)	762, 857, 1163, 1750, 1860, 2329
MaeI	CTAG	5 cut(s)	881, 1742, 1757, 1826, 2429
MaeII	ACGT	1 cut(s)	2319
MaeIII	GTNAC	6 cut(s)	367, 991, 1139, 1297, 1705, 2179
MboII	GAAGA	9 cut(s)	241, 377, 436, 851, 1412, 1564, 1864, 2401, 2513
MfeI	CAATTG	1 cut(s)	678
MflI	RGATCY	5 cut(s)	877, 1053, 1894, 2134, 2257
MhlI	GDGCHC	4 cut(s)	8, 127, 365, 2268
MlyI	GAGTC	4 cut(s)	834, 1286, 1813, 2069
MmeI	TCCRAC	1 cut(s)	808
Mph1103I	ATGCAT	7 cut(s)	435, 625, 916, 1426, 1438, 1864, 2170
MslI	CAYNNNNRTG	5 cut(s)	753, 1557, 1580, 1913, 2186
MspA1I	CMGCKG	1 cut(s)	2414
MspI	CCGG	2 cut(s)	453, 2310
MspR9I	CCNGG	1 cut(s)	862
MunI	CAATTG	1 cut(s)	678
Mva1269I	GAATGC	5 cut(s)	433, 487, 583, 1114, 1207
MvaI	CCWGG	1 cut(s)	862
MwoI	GCNNNNNNNGC	9 cut(s)	536, 587, 680, 911, 1160, 1742, 1919, 1928, 2348
NdeI	CATATG	2 cut(s)	1438, 1974
NheI	GCTAGC	1 cut(s)	1741
NlaIV	GGNNCC	3 cut(s)	6, 654, 1407
NmeAIII	GCCGAG	1 cut(s)	384
NmuCI	GTSAC	3 cut(s)	1139, 1705, 2179
NsbI	TGCGCA	2 cut(s)	1023, 1737
NsiI	ATGCAT	7 cut(s)	435, 625, 916, 1426, 1438, 1864, 2170
NspI	RCATGY	4 cut(s)	196, 729, 1862, 2034
NspV	TTCGAA	1 cut(s)	176
PaeI	GCATGC	2 cut(s)	1862, 2034
PaeR7I	CTCGAG	2 cut(s)	1683, 2145
PagI	TCATGA	2 cut(s)	1552, 1713
PceI	AGGCCT	1 cut(s)	1696
PciI	ACATGT	1 cut(s)	192
PciSI	GCTCTTC	1 cut(s)	1577
PcsI	WCGNNNNNNNCGW	1 cut(s)	2152
PctI	GAATGC	5 cut(s)	433, 487, 583, 1114, 1207
PfeI	GAWTC	8 cut(s)	410, 745, 986, 1252, 1675, 1717, 1982, 2297
PflFI	GACNNNGTC	1 cut(s)	1767
PkrI	GCNGC	6 cut(s)	777, 847, 1153, 1740, 1850, 2344
PleI	GAGTC	4 cut(s)	833, 1286, 1813, 2069
PpsI	GAGTC	4 cut(s)	833, 1286, 1813, 2069
PscI	ACATGT	1 cut(s)	192
PshAI	GACNNNNGTC	1 cut(s)	40
Psp124BI	GAGCTC	1 cut(s)	365
Psp6I	CCWGG	1 cut(s)	860
PspFI	CCCAGC	2 cut(s)	590, 1922
PspGI	CCWGG	1 cut(s)	860
PspN4I	GGNNCC	3 cut(s)	6, 654, 1407
PspOMI	GGGCCC	1 cut(s)	4
PspPI	GGNCC	3 cut(s)	4, 5, 1161
PspXI	VCTCGAGB	2 cut(s)	1683, 2145
PsrI	GAACNNNNNNTAC	2 cut(s)	1344, 1376
PstI	CTGCAG	1 cut(s)	2347
PstNI	CAGNNNCTG	1 cut(s)	104
PsuI	RGATCY	5 cut(s)	877, 1053, 1894, 2134, 2257
PsyI	GACNNNGTC	1 cut(s)	1767
RsaI	GTAC	4 cut(s)	1335, 1370, 1935, 2239
RsaNI	GTAC	4 cut(s)	1334, 1369, 1934, 2238
RseI	CAYNNNNRTG	5 cut(s)	753, 1557, 1580, 1913, 2186
SacI	GAGCTC	1 cut(s)	365
SalI	GTCGAC	1 cut(s)	2154
SapI	GCTCTTC	1 cut(s)	1577
SatI	GCNGC	6 cut(s)	776, 846, 1152, 1739, 1849, 2343
Sau96I	GGNCC	3 cut(s)	4, 5, 1161
SchI	GAGTC	4 cut(s)	834, 1286, 1813, 2069
ScrFI	CCNGG	1 cut(s)	862
SduI	GDGCHC	4 cut(s)	8, 127, 365, 2268
SfcI	CTRYAG	3 cut(s)	657, 2130, 2343
Sfr274I	CTCGAG	2 cut(s)	1683, 2145
SfuI	TTCGAA	1 cut(s)	176
SlaI	CTCGAG	2 cut(s)	1683, 2145
SmiMI	CAYNNNNRTG	5 cut(s)	753, 1557, 1580, 1913, 2186
SmlI	CTYRAG	2 cut(s)	1683, 2145
SmoI	CTYRAG	2 cut(s)	1683, 2145
SphI	GCATGC	2 cut(s)	1862, 2034
SseBI	AGGCCT	1 cut(s)	1696
SsiI	CCGC	4 cut(s)	303, 1791, 1807, 2414
SspI	AATATT	1 cut(s)	274
SspMI	CTAG	5 cut(s)	881, 1742, 1757, 1826, 2429
SstI	GAGCTC	1 cut(s)	365
StuI	AGGCCT	1 cut(s)	1696
StyD4I	CCNGG	1 cut(s)	860
StyI	CCWWGG	1 cut(s)	403
TaiI	ACGT	1 cut(s)	2322
TaqI	TCGA	6 cut(s)	176, 730, 1684, 2146, 2155, 2330
TatI	WGTACW	3 cut(s)	1333, 1933, 2237
TfiI	GAWTC	8 cut(s)	410, 745, 986, 1252, 1675, 1717, 1982, 2297
TscAI	CASTG	6 cut(s)	105, 1176, 1582, 1708, 1915, 2229
TseFI	GTSAC	3 cut(s)	1139, 1705, 2179
TseI	GCWGC	6 cut(s)	775, 845, 1151, 1738, 1848, 2342
Tsp45I	GTSAC	3 cut(s)	1139, 1705, 2179
TspGWI	ACGGA	1 cut(s)	1658
TspRI	CASTG	6 cut(s)	105, 1176, 1582, 1708, 1915, 2229
Tth111I	GACNNNGTC	1 cut(s)	1767
XagI	CCTNNNNNAGG	2 cut(s)	1088, 2248
XapI	RAATTY	2 cut(s)	28, 506
XceI	RCATGY	4 cut(s)	196, 729, 1862, 2034
XhoI	CTCGAG	2 cut(s)	1683, 2145
XmiI	GTMKAC	3 cut(s)	739, 1586, 2155
XspI	CTAG	5 cut(s)	881, 1742, 1757, 1826, 2429
Zsp2I	ATGCAT	7 cut(s)	435, 625, 916, 1426, 1438, 1864, 2170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.