Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005781.1

Orthogroup ID

OG0008664

Physical Location & Seq

Genomic Coordinates Reverse (-)

57944 .. 62933

Gene Structure 4990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005781.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

atgttctccgatgggagatgggaagcaagcgttggcttcttttgcctcaggccattcaggaaggagagctacttcacttccatgacttttggcaggaacacgaggccgaaccgagctgaaaagcacgcaatacgaattgaactcccctacccagtacgacacaaagtagacgccgtccggaacgtgtcaaaaagacttcaaccccttaatgttggcgttggtgcccgcccagatgaagatgaagatgaagttgtacacctgcctacgcccctgttgatatatgtcttaagagttgagccccaaatcggaatcaggagctactgcatagatgacaggcataatgaagtgttgcctcttccacttcgtagttctcaaagttctggtcagtttaaacccaattaccaggtattagcagcccttctcaaatcctgtgctgcccttttagcaataaattccggaaaagcacttcatggttatgttgtcaagcatggtgatctttcatgcctctctgtctcgaaagcactgctcaatatgtatgccaaatgtggtgcattggatgattgcaagacactctttgggcaaatgtgttactcagattctgtaatttggaacattgtcttatctgggttttctgcatctcggaagtacaatggtgaagtaataaagttgtttcatgaaatgcatgtaggtgggaaggctaagccgacttctgttaccattgctactgttcttccggtgtgtgctcgcttaggggatttagatatggggaagagtgtgcacacttatgtgattaagtctggattagaaacagatgttcttgtgggaaattctctgatatctatgtatgcaaaatgtgggctagtttctgatgatgcatatactgtgttcgataacatcattgacaaagatgtcatttcgtggaatgcaatgattgcagggttttctgacaatagattgataaaaaaggcatatgagttgttcagttggatgctcaaaggaccaacggacccaaataatgcaaccattgcaactattctgcccatttgtgcttctttagataataatgcctactggtcagggagagagattcattgttatgttctacgccggagtgaactagcagcagatgtttccgtgtgcaatgctttgttaagtttttatttacttcttggacgaatagaaaaagcggaatctttgttccacaggatgaaatcaagagatttggtttcatggaatgcaattattgcaggatattcatcaaatggtgagtggttgaaagcattggatttttttcacaaactaatctctttacagacgatggggccagactctgtaactattatcagcattctgcctgcttgtgcacatttaaaactcttgcatgtggggagaaagatccatgggtacattcttcgacatcctaggctatacgagtctacagcagttggaaatgccatggttagtttctatgtgaaatgtgataaaattaaagatgcttatgagacatttttcatgatgtctaggagagatttgatatcgtggaataccatgctagttgcctttgcaggtattggctattctaccaagtttgtgaacttattaaatgggctgcttaaggaaggtatgataccggatcatattaccatcttgaccataattcagttttgttctgcagtattgagagtagaaaaggttaaagaagctcatagctattcaattaaggctgggcttttgttggatgatactgagcctaatattggaaatgcgatacttgatgcatacgccaaatgtggtaacatgtactacgcattcaagatctttcagagtttatcacagaaaagagtgacatgcaattcaatgatttcagcttatgtgaattgtggatcgcatgatgatgcacaaatggtatttaacagtatgtctgaaactgatctcatctcttggaatctaatggtccgagcttatgctgaaaatgattgtcctgctgaagctgttaatctgttttatgagttacaagctcaaggaatgaagccagatgcaatgaccattatgagcctccttcctgtatctgctcaaatatcctcagtccacctgctgaggcagtgtcatggatatgtggtgagagcttttcttcatgacgtttacttgacgggagctctgttagatatgtatgcaaaatgcggtgccatagtatgtgcttctaagctgtttcagtgcagcctgcataaggatctggttatgtatacagctatgattggtgggtttgccatgcatggtatgggagaggaagcacttggggtcttctctcatatgcttgagttgggtataaagcctgataatgttattattactgctgttttatctgcttgcagtcatgctggccttgtgaatgaagggctgaagatcttttataccatagaagcggtttatggtgtcaaaccaactgtggaacagtatgcttgtgtggtggatctccttgggagaggtgggcgtgttgatgatgcattttcttttgtgtccaagatgcctattgaagcaaatgccaacatatgggggacattgctgggtgcttgtagaactcatcatatggtggacttgggccgtattgtggcagatcatctgtttgaaattgaagtcgataatattgggaactatgtggtgatgtcaaacttatatgcatcagaagctagatgggatagggtcatggaggtaagacagcttatgaggataagagacttgaaaaagccagctggatgcagttggatagaagttgagaggagtacaaaccgttttatagcgggagacttgtcccatccacagagaagtattatttacagtacattgagttcattggaccaacaaattaaagagccagtttatttaagacttgacactagaaacacttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009451 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1900864 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

968

Amino Acids

107.89

Weight (kDa)

7.87

Isoelectric Point (pI)

39.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490
fragaria_vesca	FvH4_1g29890 FvH4_1g29890 FvH4_1g29890
malus_domestica	MD02G1212500.v1.1
prunus_persica	Prupe.3G127300_v2.0.a1
pyrus_communis	pycom02g17620
rosa_laevigata	RLG00000022567
rosa_multiflora	Rmu_sc0005781.1_g000010
rosa_roxburghii	Rroxscaffold_6G00389610
rosa_rugosa	Rorug03G0279300
rosa_samantha	Rh3AG326200 Rh3BG362500 Rh3CG358600 Rh3DG361900
rosa_wichuraiana	Rw3G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	267, 2100
AasI	GACNNNNNNGTC	1 cut(s)	908
Acc36I	ACCTGC	3 cut(s)	267, 1556, 2100
AccB1I	GGYRCC	2 cut(s)	221, 2183
AccB7I	CCANNNNNTGG	1 cut(s)	2550
AccI	GTMKAC	3 cut(s)	168, 1436, 2243
AccIII	TCCGGA	2 cut(s)	177, 455
AciI	CCGC	5 cut(s)	226, 1187, 2181, 2423, 2798
AclWI	GGATC	5 cut(s)	1390, 1641, 1891, 2238, 2478
AcsI	RAATTY	2 cut(s)	451, 826
AcuI	CTGAAG	2 cut(s)	2007, 2420
AcyI	GRCGYC	1 cut(s)	171
AfaI	GTAC	7 cut(s)	156, 255, 647, 1406, 1802, 2782, 2839
AfiI	CCNNNNNNNGG	5 cut(s)	305, 1757, 2227, 2550, 2608
AflII	CTTAAG	2 cut(s)	286, 1613
AflIII	ACRYGT	2 cut(s)	183, 1797
AjnI	CCWGG	1 cut(s)	402
AjuI	GAANNNNNNNTTGG	2 cut(s)	15, 47
AleI	CACNNNNGTG	1 cut(s)	785
AloI	GAACNNNNNNTCC	2 cut(s)	1181, 1213
Alw21I	GWGCWC	4 cut(s)	745, 780, 1366, 2158
Alw26I	GTCTC	4 cut(s)	517, 1496, 2727, 2796
Alw44I	GTGCAC	2 cut(s)	776, 1362
AlwI	GGATC	5 cut(s)	1390, 1641, 1891, 2238, 2478
AlwNI	CAGNNNCTG	2 cut(s)	599, 1331
Aor13HI	TCCGGA	2 cut(s)	177, 455
AoxI	GGCC	5 cut(s)	50, 104, 1322, 2380, 2599
ApaLI	GTGCAC	2 cut(s)	776, 1362
ApeKI	GCWGC	5 cut(s)	413, 434, 1121, 1609, 2217
ApoI	RAATTY	2 cut(s)	451, 826
ArsI	GACNNNNNNTTYG	2 cut(s)	367, 399
AspA2I	CCTAGG	1 cut(s)	1421
AspS9I	GGNCC	6 cut(s)	998, 1006, 1322, 1954, 2599, 2854
AsuHPI	GGTGA	5 cut(s)	503, 665, 1277, 2131, 2671
AvaII	GGWCC	4 cut(s)	998, 1006, 1954, 2854
AvrII	CCTAGG	1 cut(s)	1421
AxyI	CCTNAGG	1 cut(s)	47
BaeGI	GKGCMC	3 cut(s)	226, 780, 1366
BanI	GGYRCC	2 cut(s)	221, 2183
BanII	GRGCYC	2 cut(s)	300, 2158
BarI	GAAGNNNNNNTAC	4 cut(s)	53, 85, 1611, 1643
BauI	CACGAG	1 cut(s)	100
BbsI	GAAGAC	1 cut(s)	2293
Bbv12I	GWGCWC	4 cut(s)	745, 780, 1366, 2158
BbvCI	CCTCAGC	1 cut(s)	2096
BbvI	GCAGC	5 cut(s)	421, 425, 1133, 1596, 2229
BccI	CCATC	6 cut(s)	5, 12, 1312, 1652, 2685, 2820
BceAI	ACGGC	2 cut(s)	158, 2586
BcgI	CGANNNNNNTGC	2 cut(s)	505, 539
BciT130I	CCWGG	1 cut(s)	404
BcoDI	GTCTC	4 cut(s)	517, 1496, 2727, 2796
BfaI	CTAG	7 cut(s)	860, 1118, 1422, 1521, 1553, 2688, 2895
BfmI	CTRYAG	2 cut(s)	1437, 1671
BfrI	CTTAAG	2 cut(s)	286, 1613
BfuAI	ACCTGC	3 cut(s)	267, 1556, 2100
BglII	AGATCT	2 cut(s)	1815, 2403
BisI	GCNGC	5 cut(s)	414, 435, 1122, 1610, 2218
BlnI	CCTAGG	1 cut(s)	1421
BlpI	GCTNAGC	1 cut(s)	699
BlsI	GCNGC	5 cut(s)	415, 436, 1123, 1611, 2219
Bme1390I	CCNGG	1 cut(s)	404
Bme18I	GGWCC	4 cut(s)	998, 1006, 1954, 2854
BmgT120I	GGNCC	6 cut(s)	998, 1006, 1322, 1954, 2599, 2854
BmiI	GGNNCC	4 cut(s)	223, 1008, 1323, 2185
BmrFI	CCNGG	1 cut(s)	404
BmrI	ACTGGG	1 cut(s)	146
BmuI	ACTGGG	1 cut(s)	146
BpiI	GAAGAC	1 cut(s)	2293
Bpu10I	CCTNAGC	2 cut(s)	748, 2096
Bpu1102I	GCTNAGC	1 cut(s)	699
BpuEI	CTTGAG	2 cut(s)	2004, 2336
BsaBI	GATNNNNATC	1 cut(s)	1255
BsaHI	GRCGYC	1 cut(s)	171
BsaJI	CCNNGG	4 cut(s)	1399, 1421, 1455, 2476
BsaWI	WCCGGW	4 cut(s)	177, 455, 733, 1630
Bsc4I	CCNNNNNNNGG	5 cut(s)	305, 1757, 2227, 2550, 2608
Bse1I	ACTGG	3 cut(s)	152, 1076, 2873
Bse21I	CCTNAGG	1 cut(s)	47
Bse3DI	GCAATG	6 cut(s)	717, 933, 1023, 1147, 2046, 2558
Bse8I	GATNNNNATC	1 cut(s)	1255
BseAI	TCCGGA	2 cut(s)	177, 455
BseBI	CCWGG	1 cut(s)	404
BseDI	CCNNGG	4 cut(s)	1399, 1421, 1455, 2476
BseGI	GGATG	7 cut(s)	562, 993, 1212, 1417, 1744, 2759, 2812
BseJI	GATNNNNATC	1 cut(s)	1255
BseLI	CCNNNNNNNGG	5 cut(s)	305, 1757, 2227, 2550, 2608
BseMI	GCAATG	6 cut(s)	717, 933, 1023, 1147, 2046, 2558
BseMII	CTCAG	5 cut(s)	61, 606, 1737, 2087, 2097
BseNI	ACTGG	3 cut(s)	152, 1076, 2873
BseRI	GAGGAG	1 cut(s)	2791
BseSI	GKGCMC	3 cut(s)	226, 780, 1366
BseXI	GCAGC	5 cut(s)	421, 425, 1133, 1596, 2229
BseYI	CCCAGC	2 cut(s)	1724, 2563
BsgI	GTGCAG	1 cut(s)	2236
BshFI	GGCC	5 cut(s)	52, 106, 1324, 2382, 2601
BshNI	GGYRCC	2 cut(s)	221, 2183
BsiHKAI	GWGCWC	4 cut(s)	745, 780, 1366, 2158
BsiSI	CCGG	5 cut(s)	178, 456, 734, 1108, 1631
BslFI	GGGAC	2 cut(s)	2569, 2794
BslI	CCNNNNNNNGG	5 cut(s)	305, 1757, 2227, 2550, 2608
BsmAI	GTCTC	4 cut(s)	517, 1496, 2727, 2796
BsmFI	GGGAC	2 cut(s)	2569, 2794
BsmI	GAATGC	4 cut(s)	928, 1240, 1347, 1808
BsnI	GGCC	5 cut(s)	52, 106, 1324, 2382, 2601
Bsp1286I	GDGCHC	6 cut(s)	226, 300, 745, 780, 1366, 2158
Bsp13I	TCCGGA	2 cut(s)	177, 455
Bsp1407I	TGTACA	1 cut(s)	253
Bsp1720I	GCTNAGC	1 cut(s)	699
Bsp19I	CCATGG	2 cut(s)	1399, 1455
BspACI	CCGC	5 cut(s)	226, 1187, 2181, 2423, 2798
BspANI	GGCC	5 cut(s)	52, 106, 1324, 2382, 2601
BspCNI	CTCAG	5 cut(s)	60, 605, 1738, 2088, 2096
BspEI	TCCGGA	2 cut(s)	177, 455
BspHI	TCATGA	3 cut(s)	673, 1512, 2134
BspLI	GGNNCC	4 cut(s)	223, 1008, 1323, 2185
BspMAI	CTGCAG	1 cut(s)	1675
BspMI	ACCTGC	3 cut(s)	267, 1556, 2100
BspPI	GGATC	5 cut(s)	1390, 1641, 1891, 2238, 2478
BspT107I	GGYRCC	2 cut(s)	221, 2183
BspTI	CTTAAG	2 cut(s)	286, 1613
BsrDI	GCAATG	6 cut(s)	717, 933, 1023, 1147, 2046, 2558
BsrGI	TGTACA	1 cut(s)	253
BsrI	ACTGG	3 cut(s)	152, 1076, 2873
BssECI	CCNNGG	4 cut(s)	1399, 1421, 1455, 2476
BssNAI	GTATAC	1 cut(s)	2244
BssNI	GRCGYC	1 cut(s)	171
BssSI	CACGAG	1 cut(s)	100
BssT1I	CCWWGG	4 cut(s)	1399, 1421, 1455, 2476
Bst1107I	GTATAC	1 cut(s)	2244
Bst2BI	CACGAG	1 cut(s)	100
Bst2UI	CCWGG	1 cut(s)	404
Bst4CI	ACNGT	7 cut(s)	727, 883, 1916, 2446, 2454, 2789, 2837
Bst6I	CTCTTC	2 cut(s)	360, 764
BstACI	GRCGYC	1 cut(s)	171
BstAFI	CTTAAG	2 cut(s)	286, 1613
BstAPI	GCANNNNNTGC	3 cut(s)	932, 1025, 1244
BstAUI	TGTACA	1 cut(s)	253
BstC8I	GCNNGC	9 cut(s)	28, 126, 226, 745, 1356, 2222, 2368, 2380, 2748
BstDEI	CTNAG	8 cut(s)	47, 592, 699, 748, 1746, 2083, 2096, 2202
BstDSI	CCRYGG	2 cut(s)	1399, 1455
BstENI	CCTNNNNNAGG	1 cut(s)	2225
BstF5I	GGATG	7 cut(s)	562, 993, 1212, 1417, 1744, 2759, 2812
BstMAI	GTCTC	4 cut(s)	517, 1496, 2727, 2796
BstMWI	GCNNNNNNNGC	6 cut(s)	42, 443, 932, 1025, 1244, 2684
BstNI	CCWGG	1 cut(s)	404
BstNSI	RCATGY	4 cut(s)	686, 1385, 1801, 1851
BstSCI	CCNGG	1 cut(s)	402
BstSFI	CTRYAG	2 cut(s)	1437, 1671
BstSLI	GKGCMC	3 cut(s)	226, 780, 1366
BstV1I	GCAGC	5 cut(s)	421, 425, 1133, 1596, 2229
BstV2I	GAAGAC	1 cut(s)	2293
BstX2I	RGATCY	5 cut(s)	1395, 1815, 2230, 2403, 2470
BstYI	RGATCY	5 cut(s)	1395, 1815, 2230, 2403, 2470
BstZ17I	GTATAC	1 cut(s)	2244
Bsu36I	CCTNAGG	1 cut(s)	47
BsuRI	GGCC	5 cut(s)	52, 106, 1324, 2382, 2601
BtgI	CCRYGG	2 cut(s)	1399, 1455
BtsCI	GGATG	7 cut(s)	562, 993, 1212, 1417, 1744, 2759, 2812
BtsI	GCAGTG	2 cut(s)	521, 2108
BtsIMutI	CAGTG	3 cut(s)	521, 2108, 2219
BveI	ACCTGC	3 cut(s)	267, 1556, 2100
Cac8I	GCNNGC	9 cut(s)	28, 126, 226, 745, 1356, 2222, 2368, 2380, 2748
CaiI	CAGNNNCTG	2 cut(s)	599, 1331
CciI	TCATGA	3 cut(s)	673, 1512, 2134
Cfr13I	GGNCC	6 cut(s)	998, 1006, 1322, 1954, 2599, 2854
CseI	GACGC	1 cut(s)	179
CsiI	ACCWGGT	1 cut(s)	402
Csp6I	GTAC	7 cut(s)	155, 254, 646, 1405, 1801, 2781, 2838
CviQI	GTAC	7 cut(s)	155, 254, 646, 1405, 1801, 2781, 2838
DdeI	CTNAG	8 cut(s)	47, 592, 699, 748, 1746, 2083, 2096, 2202
DraI	TTTAAA	2 cut(s)	391, 1371
DrdI	GACNNNNNNGTC	1 cut(s)	908
DseDI	GACNNNNNNGTC	1 cut(s)	908
Eam1104I	CTCTTC	2 cut(s)	360, 764
EarI	CTCTTC	2 cut(s)	360, 764
Ecl136II	GAGCTC	1 cut(s)	2156
Eco130I	CCWWGG	4 cut(s)	1399, 1421, 1455, 2476
Eco24I	GRGCYC	2 cut(s)	300, 2158
Eco32I	GATATC	2 cut(s)	837, 1536
Eco47I	GGWCC	4 cut(s)	998, 1006, 1954, 2854
Eco53kI	GAGCTC	1 cut(s)	2156
Eco57I	CTGAAG	2 cut(s)	2007, 2420
Eco81I	CCTNAGG	1 cut(s)	47
EcoICRI	GAGCTC	1 cut(s)	2156
EcoNI	CCTNNNNNAGG	1 cut(s)	2225
EcoRII	CCWGG	1 cut(s)	402
EcoRV	GATATC	2 cut(s)	837, 1536
EcoT14I	CCWWGG	4 cut(s)	1399, 1421, 1455, 2476
EcoT22I	ATGCAT	6 cut(s)	684, 877, 1780, 2274, 2506, 2680
EcoT38I	GRGCYC	2 cut(s)	300, 2158
ErhI	CCWWGG	4 cut(s)	1399, 1421, 1455, 2476
FalI	AAGNNNNNCTT	2 cut(s)	557, 589
FaqI	GGGAC	2 cut(s)	2569, 2794
FauI	CCCGC	2 cut(s)	233, 2791
FauNDI	CATATG	4 cut(s)	970, 2310, 2549, 2586
FblI	GTMKAC	3 cut(s)	168, 1436, 2243
Fnu4HI	GCNGC	5 cut(s)	414, 435, 1122, 1610, 2218
FokI	GGATG	7 cut(s)	569, 1000, 1219, 1404, 1751, 2766, 2799
FriOI	GRGCYC	2 cut(s)	300, 2158
Fsp4HI	GCNGC	5 cut(s)	414, 435, 1122, 1610, 2218
FspBI	CTAG	7 cut(s)	860, 1118, 1422, 1521, 1553, 2688, 2895
GluI	GCNGC	5 cut(s)	414, 435, 1122, 1610, 2218
GsaI	CCCAGC	2 cut(s)	1728, 2567
HaeIII	GGCC	5 cut(s)	52, 106, 1324, 2382, 2601
HapII	CCGG	5 cut(s)	178, 456, 734, 1108, 1631
HgaI	GACGC	1 cut(s)	179
Hin1I	GRCGYC	1 cut(s)	171
HinfI	GANTC	7 cut(s)	309, 596, 1087, 1190, 1328, 1433, 1945
HpaII	CCGG	5 cut(s)	178, 456, 734, 1108, 1631
HphI	GGTGA	5 cut(s)	503, 665, 1277, 2131, 2671
HpyAV	CCTTC	6 cut(s)	55, 428, 688, 1613, 2069, 2387
HpyCH4III	ACNGT	7 cut(s)	727, 883, 1916, 2446, 2454, 2789, 2837
HpyCH4IV	ACGT	2 cut(s)	183, 2139
HpyF10VI	GCNNNNNNNGC	6 cut(s)	42, 443, 932, 1025, 1244, 2684
HpyF3I	CTNAG	8 cut(s)	47, 592, 699, 748, 1746, 2083, 2096, 2202
HpySE526I	ACGT	2 cut(s)	183, 2139
Hsp92I	GRCGYC	1 cut(s)	171
Kpn2I	TCCGGA	2 cut(s)	177, 455
LmnI	GCTCC	2 cut(s)	315, 2153
Lsp1109I	GCAGC	5 cut(s)	421, 425, 1133, 1596, 2229
MabI	ACCWGGT	1 cut(s)	402
MaeI	CTAG	7 cut(s)	860, 1118, 1422, 1521, 1553, 2688, 2895
MaeII	ACGT	2 cut(s)	183, 2139
MaeIII	GTNAC	6 cut(s)	587, 712, 1333, 1793, 1843, 2010
MboII	GAAGA	9 cut(s)	248, 254, 347, 722, 781, 1403, 2123, 2293, 2413
MflI	RGATCY	5 cut(s)	1395, 1815, 2230, 2403, 2470
MhlI	GDGCHC	6 cut(s)	226, 300, 745, 780, 1366, 2158
MlyI	GAGTC	2 cut(s)	1322, 1442
MmeI	TCCRAC	4 cut(s)	965, 1426, 1716, 2741
Mph1103I	ATGCAT	6 cut(s)	684, 877, 1780, 2274, 2506, 2680
MroI	TCCGGA	2 cut(s)	177, 455
MslI	CAYNNNNRTG	8 cut(s)	80, 474, 687, 783, 785, 1095, 1893, 2112
MspA1I	CMGCKG	1 cut(s)	2750
MspCI	CTTAAG	2 cut(s)	286, 1613
MspI	CCGG	5 cut(s)	178, 456, 734, 1108, 1631
MspR9I	CCNGG	1 cut(s)	404
MssI	GTTTAAAC	1 cut(s)	391
Mva1269I	GAATGC	4 cut(s)	928, 1240, 1347, 1808
MvaI	CCWGG	1 cut(s)	404
MwoI	GCNNNNNNNGC	6 cut(s)	42, 443, 932, 1025, 1244, 2684
NcoI	CCATGG	2 cut(s)	1399, 1455
NdeI	CATATG	4 cut(s)	970, 2310, 2549, 2586
NlaIV	GGNNCC	4 cut(s)	223, 1008, 1323, 2185
NmuCI	GTSAC	1 cut(s)	1843
NsiI	ATGCAT	6 cut(s)	684, 877, 1780, 2274, 2506, 2680
NspI	RCATGY	4 cut(s)	686, 1385, 1801, 1851
OliI	CACNNNNGTG	1 cut(s)	785
PagI	TCATGA	3 cut(s)	673, 1512, 2134
PaqCI	CACCTGC	2 cut(s)	267, 2100
PciI	ACATGT	1 cut(s)	1797
PctI	GAATGC	4 cut(s)	928, 1240, 1347, 1808
PfeI	GAWTC	5 cut(s)	309, 596, 1087, 1190, 1945
PflFI	GACNNNGTC	1 cut(s)	173
PflMI	CCANNNNNTGG	1 cut(s)	2550
PkrI	GCNGC	5 cut(s)	415, 436, 1123, 1611, 2219
PleI	GAGTC	2 cut(s)	1322, 1441
PmeI	GTTTAAAC	1 cut(s)	391
PpsI	GAGTC	2 cut(s)	1322, 1441
PscI	ACATGT	1 cut(s)	1797
Psp124BI	GAGCTC	1 cut(s)	2158
Psp6I	CCWGG	1 cut(s)	402
PspFI	CCCAGC	2 cut(s)	1724, 2563
PspGI	CCWGG	1 cut(s)	402
PspN4I	GGNNCC	4 cut(s)	223, 1008, 1323, 2185
PspPI	GGNCC	6 cut(s)	998, 1006, 1322, 1954, 2599, 2854
PsrI	GAACNNNNNNTAC	2 cut(s)	2830, 2862
PstI	CTGCAG	1 cut(s)	1675
PstNI	CAGNNNCTG	2 cut(s)	599, 1331
PsuI	RGATCY	5 cut(s)	1395, 1815, 2230, 2403, 2470
PsyI	GACNNNGTC	1 cut(s)	173
PvuII	CAGCTG	1 cut(s)	2750
RsaI	GTAC	7 cut(s)	156, 255, 647, 1406, 1802, 2782, 2839
RsaNI	GTAC	7 cut(s)	155, 254, 646, 1405, 1801, 2781, 2838
RseI	CAYNNNNRTG	8 cut(s)	80, 474, 687, 783, 785, 1095, 1893, 2112
SacI	GAGCTC	1 cut(s)	2158
SatI	GCNGC	5 cut(s)	414, 435, 1122, 1610, 2218
Sau96I	GGNCC	6 cut(s)	998, 1006, 1322, 1954, 2599, 2854
SchI	GAGTC	2 cut(s)	1322, 1442
ScrFI	CCNGG	1 cut(s)	404
SduI	GDGCHC	6 cut(s)	226, 300, 745, 780, 1366, 2158
SexAI	ACCWGGT	1 cut(s)	402
SfcI	CTRYAG	2 cut(s)	1437, 1671
SinI	GGWCC	4 cut(s)	998, 1006, 1954, 2854
SmiMI	CAYNNNNRTG	8 cut(s)	80, 474, 687, 783, 785, 1095, 1893, 2112
SmlI	CTYRAG	4 cut(s)	286, 1613, 2019, 2315
SmoI	CTYRAG	4 cut(s)	286, 1613, 2019, 2315
SsiI	CCGC	5 cut(s)	226, 1187, 2181, 2423, 2798
SspI	AATATT	2 cut(s)	1756, 2644
SspMI	CTAG	7 cut(s)	860, 1118, 1422, 1521, 1553, 2688, 2895
SstI	GAGCTC	1 cut(s)	2158
StyD4I	CCNGG	1 cut(s)	402
StyI	CCWWGG	4 cut(s)	1399, 1421, 1455, 2476
TaaI	ACNGT	7 cut(s)	727, 883, 1916, 2446, 2454, 2789, 2837
TaiI	ACGT	2 cut(s)	186, 2142
TaqI	TCGA	4 cut(s)	515, 888, 1414, 2637
TatI	WGTACW	5 cut(s)	253, 645, 1800, 2780, 2837
TfiI	GAWTC	5 cut(s)	309, 596, 1087, 1190, 1945
TscAI	CASTG	3 cut(s)	528, 2108, 2219
TseFI	GTSAC	1 cut(s)	1843
TseI	GCWGC	5 cut(s)	413, 434, 1121, 1609, 2217
Tsp45I	GTSAC	1 cut(s)	1843
TspGWI	ACGGA	2 cut(s)	1019, 1123
TspRI	CASTG	3 cut(s)	528, 2108, 2219
Tth111I	GACNNNGTC	1 cut(s)	173
Van91I	CCANNNNNTGG	1 cut(s)	2550
Vha464I	CTTAAG	2 cut(s)	286, 1613
VneI	GTGCAC	2 cut(s)	776, 1362
VpaK11BI	GGWCC	4 cut(s)	998, 1006, 1954, 2854
XagI	CCTNNNNNAGG	1 cut(s)	2225
XapI	RAATTY	2 cut(s)	451, 826
XceI	RCATGY	4 cut(s)	686, 1385, 1801, 1851
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2275
XmaJI	CCTAGG	1 cut(s)	1421
XmiI	GTMKAC	3 cut(s)	168, 1436, 2243
XspI	CTAG	7 cut(s)	860, 1118, 1422, 1521, 1553, 2688, 2895
Zsp2I	ATGCAT	6 cut(s)	684, 877, 1780, 2274, 2506, 2680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.