Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0008664

Physical Location & Seq

Genomic Coordinates Reverse (-)

3910101 .. 3912758

Gene Structure 2658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022567

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGCTGAGAAATTTTAATGCCTCTAATATATATTTAAAGTGTACAAGAGCTGCTTGTAGACATGTATCACACAGTTCTCGAAATTTTAAAAGGAGCTACTGCATAGATGACAGGCATAATGAAGTGTTGCCTCTTCCACTTCGTAGTTCTCAAAGTTCTGGTCAGTTTAAACCCAATTACCAGGTATTAGCAGCCCTTCTCAAATCCTGTGCTGCTCTCTTAGCAATAAATTCCGGAAAAGCACTTCATGGTTATGTTGTCAAGCATGGTGATCTTTCATGCCTCTCTGTCTCGAAAGCACTGCTCAATATGTATGCCAAATGTGGTGCATTGGATGATTGCAAGACACTCTTTGGTCACATGTGTTACTCAGATTCTGTAATTTGGAACATTGTCTTATCTGGGTTTTCTGCATCTCGGAAGTACAATGGTGAGGTAATAAAGTTGTTTCATGAAATGCATGTAGGTGGGAAGGCTAAGCCGACTTCTGTTACCATTGCTACTGTTCTTCCTTTGTGTGCTCGCTTAGGGGATTTAGATATGGGGAAGAGTGTGCACACTTATGTGATTAAGTCTGGATTAGAAACAGATGTTCTTGTGGGAAATGCTCTGATATCTATGTATGCAAAATGTGGGCTAGTTTCTGATGATGCATATACTGTGTTCGATAACATCATTGACAAAGATGTCGTTTCGTGGAATGCAATGATTGCAGGGTTTTCTGAGAATAGATTGATAAAAAAGGCATATGAGTTGTTCAGTTGGATGCTCAAAGGACCAATGGACCCAAATAATGCAACCATTGCAACTATTCTGCCCGTTTGTGCTTCTTTAGATAATAATGCCTACTGGTCGGGGAGAGAGATTCATTGTTATGTTCTACGCCGGAGTGAACTAGCAGCAGATGTTTCCGTGTGCAATGCTCTGTTAAGTTTTTATTTACTTCTTCGACGAATAGAAAAAGCGGAATCTTTGTTCCACAGGATGAAATCAAGAGATTTGGTTTCATGGAATGCGATTATTGCAGGATATTCATCACATGGTGAGTGGTTGAAAGCATTGGGTTTGTTTCACAAACTAATCTCTTTACAGACGATGGGGCCAGACTCTGTAACTATTATCAGCATTCTGCCTGCTTGTGCACATTTAAAACTCTTGCATGTGGGGAGAAAGATCCATGGGTACATTCTTCGACATCCTAGGCTATACGAGTCTACAGCAGTTGGAAATGCCATGGTTAGTTTCTATGTGAAATGTGATAAAATTAAAGATGCTTATGAGACATTTTTGATGATGTCTAGGAGAGATTTGATATCGTGGAATACCATGCTAGTTGCCTTTGCAGTATTGAGATTAGAAAAGGTTAAAGAAGCTCATAGCTATTCAATTAAGGCTGGGTTTTTGTTGGATTATACTGAGCCTAATATTGGAAATGCGATACTTGATGCATACGCCAAATGTGGTAACATGGACTATGCATTCAAGATCTTTCAGAGCTTATCACAGAAAAGAGCGACATGCAATTCAATGATTTCAGCTTATGTGAATTGTGGGTCGCATGATGATGCACAAATGGTATTTAACAGTATGTCTGAGACTGATCTCATCTCTTGGAATCTAATGGTCCGAGCTTATGCTGAAAATGATTGTCCTGCAGAAGCTGTTAATCTGTTTTATGAGTTACAAGCTCAAGGAATGAAGCCAGATGCAATGACCATTATGAGCCTCCTTCCTGTATCAGCTCAAATATCCTCAGTCCACCTGCTGAGGCAGTGTCATGGATATGTGGTGAGAGCTTTTCTTCACGACGTTTACTTGACGGGAGCTCTGTTAGATATGTATGCAAAATGCGGTGCCATAGTATGTGCTTATAAGCTGTTTCAGTCCAGCCTGCATAAGGATCTGGTTATGTATACAGCTATGATTGGTGGGTTTGCCATGCATGGTATGGGAGAGGAAGCACTTGGGGTCTTCTCTCATATGCTTGAGTTGGGTATAAAGCCTGATAATGTTATTATTACTGCCGTTTTATCTGCTTGCAGTCATGCTGGCCTTGTGAATGAAGGGCTGAAGATCTTTTATACCATAGAAGCGGTTTATGGTGTCAAACCAACCGTGGAACAGTACGCTTGTGTGGTGGATCTCCTTGGGAGAGGTGGGCGTGTTGATGATGCATTTTCTTTTGTGTCCAAGATGCCTATTGAAGCTAATGCCAACATATGGGGGACATTGCTGGGTGCTTGTAGAACTCATCATATGGTGGACTTGGGCCGTATTGTGGCAGATCATCTGTTTGAAATTGAAGTCGATAATATTGGGAACTATGTGGTGATGTCAAACTTATATGCATCAGAAGCTAGATGGGATAGGGTCATGGAGGTAAGACAGCTTATGAGGATAAGAGACTTGAAAAAGCCAGCTGGATGCAGTTGGATAGAAGTTGAGAGGAGTACAAACCGTTTTATAGCGGGAGACTTGTCCCATCCACAGAGAAGTATTATTTACAGTACATTGAGCACATTGGACCAACAAATTAAAGAGCCAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009451 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1900864 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

850

Amino Acids

94.46

Weight (kDa)

8.32

Isoelectric Point (pI)

41.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	228 - 276	2.2e-10	PPR repeat family
PPR_2	PF13041	634 - 681	9.5e-08	PPR repeat family
PPR	PF01535	636 - 666	4.9e-07	PPR repeat
E_motif	PF20431	752 - 813	3.3e-15	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008664)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490 AT5G08490
fragaria_vesca	FvH4_1g29890 FvH4_1g29890 FvH4_1g29890
malus_domestica	MD02G1212500.v1.1
prunus_persica	Prupe.3G127300_v2.0.a1
pyrus_communis	pycom02g17620
rosa_laevigata	RLG00000022567
rosa_multiflora	Rmu_sc0005781.1_g000010
rosa_roxburghii	Rroxscaffold_6G00389610
rosa_rugosa	Rorug03G0279300
rosa_samantha	Rh3AG326200 Rh3BG362500 Rh3CG358600 Rh3DG361900
rosa_wichuraiana	Rw3G028560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1872
AarI	CACCTGC	1 cut(s)	1770
AasI	GACNNNNNNGTC	1 cut(s)	686
Acc36I	ACCTGC	1 cut(s)	1770
AccB1I	GGYRCC	1 cut(s)	1853
AccB7I	CCANNNNNTGG	1 cut(s)	2220
AccI	GTMKAC	3 cut(s)	58, 1214, 1913
AccIII	TCCGGA	1 cut(s)	233
AciI	CCGC	4 cut(s)	965, 1851, 2093, 2468
AclWI	GGATC	3 cut(s)	1168, 1908, 2148
AcsI	RAATTY	3 cut(s)	10, 82, 229
AcuI	CTGAAG	1 cut(s)	2090
AdeI	CACNNNGTG	1 cut(s)	1043
AfaI	GTAC	6 cut(s)	43, 425, 1184, 2126, 2452, 2509
AfiI	CCNNNNNNNGG	4 cut(s)	1427, 1897, 2220, 2278
AflIII	ACRYGT	2 cut(s)	61, 360
AgsI	TTSAA	8 cut(s)	1054, 1386, 1483, 1527, 2204, 2297, 2303, 2410
AjnI	CCWGG	1 cut(s)	180
AleI	CACNNNNGTG	1 cut(s)	563
AloI	GAACNNNNNNTCC	2 cut(s)	959, 991
Alw21I	GWGCWC	5 cut(s)	523, 558, 1144, 1828, 2519
Alw26I	GTCTC	5 cut(s)	295, 1274, 1589, 2397, 2466
Alw44I	GTGCAC	2 cut(s)	554, 1140
AlwI	GGATC	3 cut(s)	1168, 1908, 2148
AlwNI	CAGNNNCTG	3 cut(s)	377, 1109, 1661
Aor13HI	TCCGGA	1 cut(s)	233
AoxI	GGCC	3 cut(s)	1100, 2050, 2269
ApaLI	GTGCAC	2 cut(s)	554, 1140
ApeKI	GCWGC	4 cut(s)	50, 191, 212, 899
ApoI	RAATTY	3 cut(s)	10, 82, 229
ArsI	GACNNNNNNTTYG	2 cut(s)	145, 177
AspA2I	CCTAGG	1 cut(s)	1199
AspS9I	GGNCC	6 cut(s)	776, 784, 1100, 1624, 2269, 2524
AsuHPI	GGTGA	5 cut(s)	281, 443, 1055, 1801, 2341
AvaII	GGWCC	4 cut(s)	776, 784, 1624, 2524
AvrII	CCTAGG	1 cut(s)	1199
BaeGI	GKGCMC	2 cut(s)	558, 1144
BanI	GGYRCC	1 cut(s)	1853
BanII	GRGCYC	1 cut(s)	1828
BbsI	GAAGAC	1 cut(s)	1963
Bbv12I	GWGCWC	5 cut(s)	523, 558, 1144, 1828, 2519
BbvCI	CCTCAGC	1 cut(s)	1766
BbvI	GCAGC	4 cut(s)	37, 199, 203, 911
BccI	CCATC	3 cut(s)	1090, 2355, 2490
BceAI	ACGGC	2 cut(s)	2009, 2256
BcgI	CGANNNNNNTGC	2 cut(s)	283, 317
BciT130I	CCWGG	1 cut(s)	182
BcoDI	GTCTC	5 cut(s)	295, 1274, 1589, 2397, 2466
BfaI	CTAG	6 cut(s)	638, 896, 1200, 1299, 1331, 2358
BfmI	CTRYAG	2 cut(s)	1215, 1653
BfuAI	ACCTGC	1 cut(s)	1770
BglII	AGATCT	2 cut(s)	1485, 2073
BisI	GCNGC	4 cut(s)	51, 192, 213, 900
BlnI	CCTAGG	1 cut(s)	1199
BlpI	GCTNAGC	1 cut(s)	477
BlsI	GCNGC	4 cut(s)	52, 193, 214, 901
Bme1390I	CCNGG	1 cut(s)	182
Bme18I	GGWCC	4 cut(s)	776, 784, 1624, 2524
BmgT120I	GGNCC	6 cut(s)	776, 784, 1100, 1624, 2269, 2524
BmiI	GGNNCC	3 cut(s)	786, 1101, 1855
BmrFI	CCNGG	1 cut(s)	182
BpiI	GAAGAC	1 cut(s)	1963
Bpu10I	CCTNAGC	2 cut(s)	526, 1766
Bpu1102I	GCTNAGC	1 cut(s)	477
BpuEI	CTTGAG	2 cut(s)	1674, 2006
BsaBI	GATNNNNATC	1 cut(s)	1033
BsaJI	CCNNGG	5 cut(s)	1177, 1199, 1233, 2115, 2146
BsaWI	WCCGGW	1 cut(s)	233
Bsc4I	CCNNNNNNNGG	4 cut(s)	1427, 1897, 2220, 2278
Bse1I	ACTGG	2 cut(s)	854, 2543
Bse3DI	GCAATG	6 cut(s)	495, 711, 801, 925, 1716, 2228
Bse8I	GATNNNNATC	1 cut(s)	1033
BseAI	TCCGGA	1 cut(s)	233
BseBI	CCWGG	1 cut(s)	182
BseDI	CCNNGG	5 cut(s)	1177, 1199, 1233, 2115, 2146
BseGI	GGATG	6 cut(s)	340, 771, 990, 1195, 2429, 2482
BseJI	GATNNNNATC	1 cut(s)	1033
BseLI	CCNNNNNNNGG	4 cut(s)	1427, 1897, 2220, 2278
BseMI	GCAATG	6 cut(s)	495, 711, 801, 925, 1716, 2228
BseMII	CTCAG	6 cut(s)	384, 714, 1407, 1584, 1757, 1767
BseNI	ACTGG	2 cut(s)	854, 2543
BseRI	GAGGAG	1 cut(s)	2461
BseSI	GKGCMC	2 cut(s)	558, 1144
BseXI	GCAGC	4 cut(s)	37, 199, 203, 911
BseYI	CCCAGC	2 cut(s)	1394, 2233
BshFI	GGCC	3 cut(s)	1102, 2052, 2271
BshNI	GGYRCC	1 cut(s)	1853
BsiHKAI	GWGCWC	5 cut(s)	523, 558, 1144, 1828, 2519
BsiSI	CCGG	2 cut(s)	234, 886
BslFI	GGGAC	2 cut(s)	2239, 2464
BslI	CCNNNNNNNGG	4 cut(s)	1427, 1897, 2220, 2278
BsmAI	GTCTC	5 cut(s)	295, 1274, 1589, 2397, 2466
BsmFI	GGGAC	2 cut(s)	2239, 2464
BsmI	GAATGC	4 cut(s)	706, 1018, 1125, 1478
BsnI	GGCC	3 cut(s)	1102, 2052, 2271
Bsp1286I	GDGCHC	5 cut(s)	523, 558, 1144, 1828, 2519
Bsp13I	TCCGGA	1 cut(s)	233
Bsp1407I	TGTACA	1 cut(s)	41
Bsp143I	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
Bsp1720I	GCTNAGC	1 cut(s)	477
Bsp19I	CCATGG	2 cut(s)	1177, 1233
BspACI	CCGC	4 cut(s)	965, 1851, 2093, 2468
BspANI	GGCC	3 cut(s)	1102, 2052, 2271
BspCNI	CTCAG	6 cut(s)	383, 715, 1408, 1585, 1758, 1766
BspEI	TCCGGA	1 cut(s)	233
BspHI	TCATGA	1 cut(s)	451
BspLI	GGNNCC	3 cut(s)	786, 1101, 1855
BspMAI	CTGCAG	1 cut(s)	1657
BspMI	ACCTGC	1 cut(s)	1770
BspPI	GGATC	3 cut(s)	1168, 1908, 2148
BspT107I	GGYRCC	1 cut(s)	1853
BsrDI	GCAATG	6 cut(s)	495, 711, 801, 925, 1716, 2228
BsrGI	TGTACA	1 cut(s)	41
BsrI	ACTGG	2 cut(s)	854, 2543
BssECI	CCNNGG	5 cut(s)	1177, 1199, 1233, 2115, 2146
BssMI	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
BssNAI	GTATAC	1 cut(s)	1914
BssT1I	CCWWGG	4 cut(s)	1177, 1199, 1233, 2146
Bst1107I	GTATAC	1 cut(s)	1914
Bst2UI	CCWGG	1 cut(s)	182
Bst4CI	ACNGT	8 cut(s)	74, 505, 661, 1586, 2116, 2124, 2459, 2507
Bst6I	CTCTTC	2 cut(s)	138, 542
BstAPI	GCANNNNNTGC	2 cut(s)	710, 803
BstAUI	TGTACA	1 cut(s)	41
BstC8I	GCNNGC	6 cut(s)	523, 1134, 1892, 2038, 2050, 2418
BstDSI	CCRYGG	3 cut(s)	1177, 1233, 2115
BstENI	CCTNNNNNAGG	1 cut(s)	1895
BstF5I	GGATG	6 cut(s)	340, 771, 990, 1195, 2429, 2482
BstKTI	GATC	8 cut(s)	274, 1176, 1488, 1603, 1903, 2076, 2143, 2287
BstMAI	GTCTC	5 cut(s)	295, 1274, 1589, 2397, 2466
BstMBI	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
BstMWI	GCNNNNNNNGC	5 cut(s)	221, 710, 803, 1022, 2354
BstNI	CCWGG	1 cut(s)	182
BstNSI	RCATGY	5 cut(s)	65, 364, 464, 1163, 1521
BstSCI	CCNGG	1 cut(s)	180
BstSFI	CTRYAG	2 cut(s)	1215, 1653
BstSLI	GKGCMC	2 cut(s)	558, 1144
BstV1I	GCAGC	4 cut(s)	37, 199, 203, 911
BstV2I	GAAGAC	1 cut(s)	1963
BstX2I	RGATCY	5 cut(s)	1173, 1485, 1900, 2073, 2140
BstYI	RGATCY	5 cut(s)	1173, 1485, 1900, 2073, 2140
BstZ17I	GTATAC	1 cut(s)	1914
BsuRI	GGCC	3 cut(s)	1102, 2052, 2271
BtgI	CCRYGG	3 cut(s)	1177, 1233, 2115
BtsCI	GGATG	6 cut(s)	340, 771, 990, 1195, 2429, 2482
BtsI	GCAGTG	2 cut(s)	299, 1778
BtsIMutI	CAGTG	2 cut(s)	299, 1778
BveI	ACCTGC	1 cut(s)	1770
Cac8I	GCNNGC	6 cut(s)	523, 1134, 1892, 2038, 2050, 2418
CaiI	CAGNNNCTG	3 cut(s)	377, 1109, 1661
CciI	TCATGA	1 cut(s)	451
Cfr13I	GGNCC	6 cut(s)	776, 784, 1100, 1624, 2269, 2524
CsiI	ACCWGGT	1 cut(s)	180
Csp6I	GTAC	6 cut(s)	42, 424, 1183, 2125, 2451, 2508
CviQI	GTAC	6 cut(s)	42, 424, 1183, 2125, 2451, 2508
DpnI	GATC	8 cut(s)	273, 1175, 1487, 1602, 1902, 2075, 2142, 2286
DpnII	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
DraI	TTTAAA	4 cut(s)	36, 88, 169, 1149
DraIII	CACNNNGTG	1 cut(s)	1043
DrdI	GACNNNNNNGTC	1 cut(s)	686
DseDI	GACNNNNNNGTC	1 cut(s)	686
Eam1104I	CTCTTC	2 cut(s)	138, 542
EarI	CTCTTC	2 cut(s)	138, 542
Ecl136II	GAGCTC	1 cut(s)	1826
Eco130I	CCWWGG	4 cut(s)	1177, 1199, 1233, 2146
Eco24I	GRGCYC	1 cut(s)	1828
Eco32I	GATATC	2 cut(s)	615, 1314
Eco47I	GGWCC	4 cut(s)	776, 784, 1624, 2524
Eco53kI	GAGCTC	1 cut(s)	1826
Eco57I	CTGAAG	1 cut(s)	2090
EcoICRI	GAGCTC	1 cut(s)	1826
EcoNI	CCTNNNNNAGG	1 cut(s)	1895
EcoRII	CCWGG	1 cut(s)	180
EcoRV	GATATC	2 cut(s)	615, 1314
EcoT14I	CCWWGG	4 cut(s)	1177, 1199, 1233, 2146
EcoT22I	ATGCAT	7 cut(s)	462, 655, 1450, 1480, 1944, 2176, 2350
EcoT38I	GRGCYC	1 cut(s)	1828
ErhI	CCWWGG	4 cut(s)	1177, 1199, 1233, 2146
FalI	AAGNNNNNCTT	4 cut(s)	37, 69, 335, 367
FaqI	GGGAC	2 cut(s)	2239, 2464
FauI	CCCGC	1 cut(s)	2461
FauNDI	CATATG	4 cut(s)	748, 1980, 2219, 2256
FblI	GTMKAC	3 cut(s)	58, 1214, 1913
Fnu4HI	GCNGC	4 cut(s)	51, 192, 213, 900
FokI	GGATG	6 cut(s)	347, 778, 997, 1182, 2436, 2469
FriOI	GRGCYC	1 cut(s)	1828
Fsp4HI	GCNGC	4 cut(s)	51, 192, 213, 900
FspBI	CTAG	6 cut(s)	638, 896, 1200, 1299, 1331, 2358
GluI	GCNGC	4 cut(s)	51, 192, 213, 900
GsaI	CCCAGC	2 cut(s)	1398, 2237
HaeIII	GGCC	3 cut(s)	1102, 2052, 2271
HapII	CCGG	2 cut(s)	234, 886
HinfI	GANTC	6 cut(s)	374, 865, 968, 1106, 1211, 1615
HpaII	CCGG	2 cut(s)	234, 886
HphI	GGTGA	5 cut(s)	281, 443, 1055, 1801, 2341
Hpy188I	TCNGA	9 cut(s)	373, 420, 612, 646, 724, 1494, 1594, 1628, 2353
Hpy188III	TCNNGA	8 cut(s)	78, 234, 292, 452, 576, 993, 1483, 1805
Hpy99I	CGWCG	2 cut(s)	954, 1811
HpyAV	CCTTC	4 cut(s)	206, 466, 1739, 2057
HpyCH4III	ACNGT	8 cut(s)	74, 505, 661, 1586, 2116, 2124, 2459, 2507
HpyCH4IV	ACGT	1 cut(s)	1809
HpyF10VI	GCNNNNNNNGC	5 cut(s)	221, 710, 803, 1022, 2354
HpySE526I	ACGT	1 cut(s)	1809
Kpn2I	TCCGGA	1 cut(s)	233
Kzo9I	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
LmnI	GCTCC	2 cut(s)	93, 1823
Lsp1109I	GCAGC	4 cut(s)	37, 199, 203, 911
MabI	ACCWGGT	1 cut(s)	180
MaeI	CTAG	6 cut(s)	638, 896, 1200, 1299, 1331, 2358
MaeII	ACGT	1 cut(s)	1809
MaeIII	GTNAC	6 cut(s)	356, 365, 490, 1111, 1463, 1680
MalI	GATC	8 cut(s)	273, 1175, 1487, 1602, 1902, 2075, 2142, 2286
MboI	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
MboII	GAAGA	8 cut(s)	125, 500, 559, 938, 1181, 1793, 1963, 2083
MflI	RGATCY	5 cut(s)	1173, 1485, 1900, 2073, 2140
MhlI	GDGCHC	5 cut(s)	523, 558, 1144, 1828, 2519
MlyI	GAGTC	2 cut(s)	1100, 1220
MmeI	TCCRAC	4 cut(s)	743, 1204, 1386, 2411
Mph1103I	ATGCAT	7 cut(s)	462, 655, 1450, 1480, 1944, 2176, 2350
MroI	TCCGGA	1 cut(s)	233
MslI	CAYNNNNRTG	7 cut(s)	252, 465, 561, 563, 873, 1563, 1782
MspA1I	CMGCKG	1 cut(s)	2420
MspI	CCGG	2 cut(s)	234, 886
MspR9I	CCNGG	1 cut(s)	182
MssI	GTTTAAAC	1 cut(s)	169
Mva1269I	GAATGC	4 cut(s)	706, 1018, 1125, 1478
MvaI	CCWGG	1 cut(s)	182
MwoI	GCNNNNNNNGC	5 cut(s)	221, 710, 803, 1022, 2354
NcoI	CCATGG	2 cut(s)	1177, 1233
NdeI	CATATG	4 cut(s)	748, 1980, 2219, 2256
NdeII	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
NlaIV	GGNNCC	3 cut(s)	786, 1101, 1855
NmuCI	GTSAC	1 cut(s)	356
NsiI	ATGCAT	7 cut(s)	462, 655, 1450, 1480, 1944, 2176, 2350
NspI	RCATGY	5 cut(s)	65, 364, 464, 1163, 1521
OliI	CACNNNNGTG	1 cut(s)	563
PagI	TCATGA	1 cut(s)	451
PaqCI	CACCTGC	1 cut(s)	1770
PciI	ACATGT	2 cut(s)	61, 360
PctI	GAATGC	4 cut(s)	706, 1018, 1125, 1478
PfeI	GAWTC	4 cut(s)	374, 865, 968, 1615
PflMI	CCANNNNNTGG	1 cut(s)	2220
PkrI	GCNGC	4 cut(s)	52, 193, 214, 901
PleI	GAGTC	2 cut(s)	1100, 1219
PmeI	GTTTAAAC	1 cut(s)	169
PpsI	GAGTC	2 cut(s)	1100, 1219
PscI	ACATGT	2 cut(s)	61, 360
PsiI	TTATAA	1 cut(s)	1872
Psp124BI	GAGCTC	1 cut(s)	1828
Psp6I	CCWGG	1 cut(s)	180
PspFI	CCCAGC	2 cut(s)	1394, 2233
PspGI	CCWGG	1 cut(s)	180
PspN4I	GGNNCC	3 cut(s)	786, 1101, 1855
PspPI	GGNCC	6 cut(s)	776, 784, 1100, 1624, 2269, 2524
PstI	CTGCAG	1 cut(s)	1657
PstNI	CAGNNNCTG	3 cut(s)	377, 1109, 1661
PsuI	RGATCY	5 cut(s)	1173, 1485, 1900, 2073, 2140
PvuII	CAGCTG	1 cut(s)	2420
RsaI	GTAC	6 cut(s)	43, 425, 1184, 2126, 2452, 2509
RsaNI	GTAC	6 cut(s)	42, 424, 1183, 2125, 2451, 2508
RseI	CAYNNNNRTG	7 cut(s)	252, 465, 561, 563, 873, 1563, 1782
SacI	GAGCTC	1 cut(s)	1828
SatI	GCNGC	4 cut(s)	51, 192, 213, 900
Sau3AI	GATC	8 cut(s)	271, 1173, 1485, 1600, 1900, 2073, 2140, 2284
Sau96I	GGNCC	6 cut(s)	776, 784, 1100, 1624, 2269, 2524
SchI	GAGTC	2 cut(s)	1100, 1220
ScrFI	CCNGG	1 cut(s)	182
SduI	GDGCHC	5 cut(s)	523, 558, 1144, 1828, 2519
SexAI	ACCWGGT	1 cut(s)	180
SfcI	CTRYAG	2 cut(s)	1215, 1653
SinI	GGWCC	4 cut(s)	776, 784, 1624, 2524
SmiMI	CAYNNNNRTG	7 cut(s)	252, 465, 561, 563, 873, 1563, 1782
SmlI	CTYRAG	2 cut(s)	1689, 1985
SmoI	CTYRAG	2 cut(s)	1689, 1985
SsiI	CCGC	4 cut(s)	965, 1851, 2093, 2468
SspI	AATATT	2 cut(s)	1426, 2314
SspMI	CTAG	6 cut(s)	638, 896, 1200, 1299, 1331, 2358
SstI	GAGCTC	1 cut(s)	1828
StyD4I	CCNGG	1 cut(s)	180
StyI	CCWWGG	4 cut(s)	1177, 1199, 1233, 2146
TaaI	ACNGT	8 cut(s)	74, 505, 661, 1586, 2116, 2124, 2459, 2507
TaiI	ACGT	1 cut(s)	1812
TaqI	TCGA	6 cut(s)	79, 293, 666, 949, 1192, 2307
TatI	WGTACW	4 cut(s)	41, 423, 2450, 2507
TfiI	GAWTC	4 cut(s)	374, 865, 968, 1615
TscAI	CASTG	2 cut(s)	306, 1778
TseFI	GTSAC	1 cut(s)	356
TseI	GCWGC	4 cut(s)	50, 191, 212, 899
Tsp45I	GTSAC	1 cut(s)	356
TspGWI	ACGGA	1 cut(s)	901
TspRI	CASTG	2 cut(s)	306, 1778
Van91I	CCANNNNNTGG	1 cut(s)	2220
VneI	GTGCAC	2 cut(s)	554, 1140
VpaK11BI	GGWCC	4 cut(s)	776, 784, 1624, 2524
XagI	CCTNNNNNAGG	1 cut(s)	1895
XapI	RAATTY	3 cut(s)	10, 82, 229
XceI	RCATGY	5 cut(s)	65, 364, 464, 1163, 1521
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1945
XmaJI	CCTAGG	1 cut(s)	1199
XmiI	GTMKAC	3 cut(s)	58, 1214, 1913
XspI	CTAG	6 cut(s)	638, 896, 1200, 1299, 1331, 2358
Zsp2I	ATGCAT	7 cut(s)	462, 655, 1450, 1480, 1944, 2176, 2350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.