ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10790 AT5G10790 |
| fragaria_vesca | FvH4_2g41240 |
| malus_domestica | MD08G1052900.v1.1 MD15G1042700.v1.1 |
| prunus_persica | Prupe.1G396000_v2.0.a1 |
| pyrus_communis | pycom08g04410 pycom15g03980 |
| rosa_chinensis | RchiOBHm_Chr6g0299261 |
| rosa_laevigata | RLG00000011448 |
| rosa_multiflora | Rmu_sc0001434.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00168850 |
| rosa_rugosa | Rorug06G0286700 |
| rosa_samantha | Rh6AG398000 Rh6BG406500 Rh6CG412600 Rh6DG399300 |
| rosa_wichuraiana | Rw6G034840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 60 |
| AccII | CGCG | 1 cut(s) | 8 |
| AciI | CCGC | 7 cut(s) | 6, 419, 1026, 1300, 1345, 1418, 1436 |
| AclWI | GGATC | 4 cut(s) | 29, 948, 961, 1535 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AdeI | CACNNNGTG | 1 cut(s) | 1477 |
| AfaI | GTAC | 2 cut(s) | 76, 943 |
| AflIII | ACRYGT | 3 cut(s) | 947, 1308, 1572 |
| AgsI | TTSAA | 9 cut(s) | 97, 118, 146, 234, 262, 538, 1008, 1541, 1604 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1396 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 428, 460 |
| AluBI | AGCT | 7 cut(s) | 64, 304, 373, 782, 1158, 1281, 1610 |
| AluI | AGCT | 7 cut(s) | 64, 304, 373, 782, 1158, 1281, 1610 |
| Alw26I | GTCTC | 4 cut(s) | 187, 487, 1317, 1586 |
| AlwI | GGATC | 4 cut(s) | 29, 948, 961, 1535 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 407 |
| Ama87I | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| AoxI | GGCC | 1 cut(s) | 268 |
| ApeKI | GCWGC | 3 cut(s) | 370, 763, 793 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 502, 534, 1175, 1207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1016 |
| AspS9I | GGNCC | 3 cut(s) | 829, 1058, 1130 |
| AsuHPI | GGTGA | 6 cut(s) | 477, 728, 889, 928, 1394, 1564 |
| AsuII | TTCGAA | 2 cut(s) | 1181, 1239 |
| AvaI | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| AvaII | GGWCC | 3 cut(s) | 829, 1058, 1130 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1039, 1072 |
| BamHI | GGATCC | 1 cut(s) | 953 |
| BauI | CACGAG | 1 cut(s) | 806 |
| BbsI | GAAGAC | 1 cut(s) | 1207 |
| BbvI | GCAGC | 3 cut(s) | 382, 775, 805 |
| BccI | CCATC | 4 cut(s) | 74, 1340, 1367, 1420 |
| BciVI | GTATCC | 2 cut(s) | 845, 1302 |
| BclI | TGATCA | 1 cut(s) | 459 |
| BcoDI | GTCTC | 4 cut(s) | 187, 487, 1317, 1586 |
| BfaI | CTAG | 2 cut(s) | 648, 779 |
| BfuI | GTATCC | 2 cut(s) | 845, 1302 |
| BglII | AGATCT | 1 cut(s) | 296 |
| BisI | GCNGC | 3 cut(s) | 371, 764, 794 |
| BlsI | GCNGC | 3 cut(s) | 372, 765, 795 |
| Bme18I | GGWCC | 3 cut(s) | 829, 1058, 1130 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1396 |
| BmeT110I | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| BmgT120I | GGNCC | 3 cut(s) | 829, 1058, 1130 |
| BmiI | GGNNCC | 1 cut(s) | 955 |
| BmrI | ACTGGG | 1 cut(s) | 250 |
| BmsI | GCATC | 6 cut(s) | 101, 112, 155, 330, 1510, 1639 |
| BmuI | ACTGGG | 1 cut(s) | 250 |
| BpiI | GAAGAC | 1 cut(s) | 1207 |
| Bpu14I | TTCGAA | 2 cut(s) | 1181, 1239 |
| Bsa29I | ATCGAT | 1 cut(s) | 324 |
| BsaAI | YACGTR | 1 cut(s) | 1228 |
| BsaBI | GATNNNNATC | 2 cut(s) | 134, 958 |
| BsaI | GGTCTC | 1 cut(s) | 487 |
| BsaJI | CCNNGG | 1 cut(s) | 1641 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 875, 905 |
| Bse1I | ACTGG | 1 cut(s) | 256 |
| Bse8I | GATNNNNATC | 2 cut(s) | 134, 958 |
| BseCI | ATCGAT | 1 cut(s) | 324 |
| BseDI | CCNNGG | 1 cut(s) | 1641 |
| BseGI | GGATG | 2 cut(s) | 1461, 1565 |
| BseJI | GATNNNNATC | 2 cut(s) | 134, 958 |
| BseMII | CTCAG | 3 cut(s) | 291, 333, 1478 |
| BseNI | ACTGG | 1 cut(s) | 256 |
| BseRI | GAGGAG | 3 cut(s) | 454, 585, 896 |
| BseXI | GCAGC | 3 cut(s) | 382, 775, 805 |
| Bsh1236I | CGCG | 1 cut(s) | 8 |
| BshFI | GGCC | 1 cut(s) | 270 |
| BshVI | ATCGAT | 1 cut(s) | 324 |
| BsiHKCI | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| BsmAI | GTCTC | 4 cut(s) | 187, 487, 1317, 1586 |
| BsmI | GAATGC | 2 cut(s) | 571, 908 |
| BsnI | GGCC | 1 cut(s) | 270 |
| Bso31I | GGTCTC | 1 cut(s) | 487 |
| BsoBI | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| Bsp119I | TTCGAA | 2 cut(s) | 1181, 1239 |
| Bsp1407I | TGTACA | 1 cut(s) | 941 |
| Bsp19I | CCATGG | 1 cut(s) | 1641 |
| BspACI | CCGC | 7 cut(s) | 6, 419, 1026, 1300, 1345, 1418, 1436 |
| BspANI | GGCC | 1 cut(s) | 270 |
| BspCNI | CTCAG | 3 cut(s) | 292, 334, 1479 |
| BspDI | ATCGAT | 1 cut(s) | 324 |
| BspFNI | CGCG | 1 cut(s) | 8 |
| BspLI | GGNNCC | 1 cut(s) | 955 |
| BspPI | GGATC | 4 cut(s) | 29, 948, 961, 1535 |
| BspT104I | TTCGAA | 2 cut(s) | 1181, 1239 |
| BspTNI | GGTCTC | 1 cut(s) | 487 |
| BsrGI | TGTACA | 1 cut(s) | 941 |
| BsrI | ACTGG | 1 cut(s) | 256 |
| BssECI | CCNNGG | 1 cut(s) | 1641 |
| BssSI | CACGAG | 1 cut(s) | 806 |
| BssT1I | CCWWGG | 1 cut(s) | 1641 |
| Bst2BI | CACGAG | 1 cut(s) | 806 |
| Bst4CI | ACNGT | 6 cut(s) | 755, 833, 1052, 1116, 1394, 1597 |
| Bst6I | CTCTTC | 2 cut(s) | 431, 1330 |
| BstAUI | TGTACA | 1 cut(s) | 941 |
| BstBAI | YACGTR | 1 cut(s) | 1228 |
| BstBI | TTCGAA | 2 cut(s) | 1181, 1239 |
| BstC8I | GCNNGC | 3 cut(s) | 319, 579, 1223 |
| BstDEI | CTNAG | 6 cut(s) | 65, 300, 342, 366, 1099, 1487 |
| BstDSI | CCRYGG | 1 cut(s) | 1641 |
| BstF5I | GGATG | 2 cut(s) | 1461, 1565 |
| BstFNI | CGCG | 1 cut(s) | 8 |
| BstMAI | GTCTC | 4 cut(s) | 187, 487, 1317, 1586 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 318, 1231 |
| BstNSI | RCATGY | 3 cut(s) | 951, 1312, 1576 |
| BstUI | CGCG | 1 cut(s) | 8 |
| BstV1I | GCAGC | 3 cut(s) | 382, 775, 805 |
| BstV2I | GAAGAC | 1 cut(s) | 1207 |
| BstX2I | RGATCY | 2 cut(s) | 296, 953 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1160 |
| BstYI | RGATCY | 2 cut(s) | 296, 953 |
| Bsu15I | ATCGAT | 1 cut(s) | 324 |
| BsuI | GTATCC | 2 cut(s) | 845, 1302 |
| BsuRI | GGCC | 1 cut(s) | 270 |
| BsuTUI | ATCGAT | 1 cut(s) | 324 |
| BtgI | CCRYGG | 1 cut(s) | 1641 |
| BtsCI | GGATG | 2 cut(s) | 1461, 1565 |
| BtsIMutI | CAGTG | 3 cut(s) | 896, 1057, 1602 |
| Cac8I | GCNNGC | 3 cut(s) | 319, 579, 1223 |
| CaiI | CAGNNNCTG | 1 cut(s) | 407 |
| Cfr13I | GGNCC | 3 cut(s) | 829, 1058, 1130 |
| ClaI | ATCGAT | 1 cut(s) | 324 |
| Csp6I | GTAC | 2 cut(s) | 75, 942 |
| CviAII | CATG | 9 cut(s) | 272, 590, 839, 948, 1078, 1309, 1524, 1573, 1642 |
| CviQI | GTAC | 2 cut(s) | 75, 942 |
| DdeI | CTNAG | 6 cut(s) | 65, 300, 342, 366, 1099, 1487 |
| DraIII | CACNNNGTG | 1 cut(s) | 1477 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1396 |
| Eam1104I | CTCTTC | 2 cut(s) | 431, 1330 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1396 |
| EarI | CTCTTC | 2 cut(s) | 431, 1330 |
| EciI | GGCGGA | 1 cut(s) | 1289 |
| Eco130I | CCWWGG | 1 cut(s) | 1641 |
| Eco31I | GGTCTC | 1 cut(s) | 487 |
| Eco32I | GATATC | 1 cut(s) | 277 |
| Eco47I | GGWCC | 3 cut(s) | 829, 1058, 1130 |
| Eco88I | CYCGRG | 3 cut(s) | 489, 1090, 1264 |
| EcoRV | GATATC | 1 cut(s) | 277 |
| EcoT14I | CCWWGG | 1 cut(s) | 1641 |
| EcoT22I | ATGCAT | 2 cut(s) | 1525, 1654 |
| ErhI | CCWWGG | 1 cut(s) | 1641 |
| FaeI | CATG | 9 cut(s) | 275, 593, 842, 951, 1081, 1312, 1527, 1576, 1645 |
| FatI | CATG | 9 cut(s) | 271, 589, 838, 947, 1077, 1308, 1523, 1572, 1641 |
| FauI | CCCGC | 1 cut(s) | 1033 |
| FauNDI | CATATG | 2 cut(s) | 787, 970 |
| FbaI | TGATCA | 1 cut(s) | 459 |
| Fnu4HI | GCNGC | 3 cut(s) | 371, 764, 794 |
| FokI | GGATG | 2 cut(s) | 1468, 1572 |
| Fsp4HI | GCNGC | 3 cut(s) | 371, 764, 794 |
| FspBI | CTAG | 2 cut(s) | 648, 779 |
| GluI | GCNGC | 3 cut(s) | 371, 764, 794 |
| HaeIII | GGCC | 1 cut(s) | 270 |
| Hin1II | CATG | 9 cut(s) | 275, 593, 842, 951, 1081, 1312, 1527, 1576, 1645 |
| HincII | GTYRAC | 1 cut(s) | 626 |
| HindII | GTYRAC | 1 cut(s) | 626 |
| HindIII | AAGCTT | 1 cut(s) | 62 |
| HphI | GGTGA | 6 cut(s) | 477, 728, 889, 928, 1394, 1564 |
| Hpy166II | GTNNAC | 3 cut(s) | 626, 1058, 1069 |
| Hpy188III | TCNNGA | 8 cut(s) | 32, 491, 635, 686, 806, 872, 1133, 1266 |
| Hpy8I | GTNNAC | 3 cut(s) | 626, 1058, 1069 |
| Hpy99I | CGWCG | 1 cut(s) | 353 |
| HpyAV | CCTTC | 3 cut(s) | 492, 842, 1373 |
| HpyCH4III | ACNGT | 6 cut(s) | 755, 833, 1052, 1116, 1394, 1597 |
| HpyCH4IV | ACGT | 3 cut(s) | 512, 1227, 1481 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 318, 1231 |
| HpyF3I | CTNAG | 6 cut(s) | 65, 300, 342, 366, 1099, 1487 |
| HpySE526I | ACGT | 3 cut(s) | 512, 1227, 1481 |
| Hsp92II | CATG | 9 cut(s) | 275, 593, 842, 951, 1081, 1312, 1527, 1576, 1645 |
| Ksp22I | TGATCA | 1 cut(s) | 459 |
| LmnI | GCTCC | 1 cut(s) | 598 |
| Lsp1109I | GCAGC | 3 cut(s) | 382, 775, 805 |
| LweI | GCATC | 6 cut(s) | 101, 112, 155, 330, 1510, 1639 |
| MaeI | CTAG | 2 cut(s) | 648, 779 |
| MaeII | ACGT | 3 cut(s) | 512, 1227, 1481 |
| MaeIII | GTNAC | 6 cut(s) | 83, 934, 1441, 1469, 1477, 1568 |
| MfeI | CAATTG | 1 cut(s) | 455 |
| MflI | RGATCY | 2 cut(s) | 296, 953 |
| MluCI | AATT | 3 cut(s) | 455, 472, 1272 |
| MlyI | GAGTC | 3 cut(s) | 189, 443, 718 |
| MmeI | TCCRAC | 1 cut(s) | 1440 |
| Mph1103I | ATGCAT | 2 cut(s) | 1525, 1654 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1016 |
| MseI | TTAA | 4 cut(s) | 132, 396, 923, 1494 |
| MslI | CAYNNNNRTG | 1 cut(s) | 633 |
| MspA1I | CMGCKG | 2 cut(s) | 1028, 1418 |
| MunI | CAATTG | 1 cut(s) | 455 |
| Mva1269I | GAATGC | 2 cut(s) | 571, 908 |
| MvnI | CGCG | 1 cut(s) | 8 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 318, 1231 |
| NcoI | CCATGG | 1 cut(s) | 1641 |
| NdeI | CATATG | 2 cut(s) | 787, 970 |
| NlaIII | CATG | 9 cut(s) | 275, 593, 842, 951, 1081, 1312, 1527, 1576, 1645 |
| NlaIV | GGNNCC | 1 cut(s) | 955 |
| NmuCI | GTSAC | 4 cut(s) | 934, 1441, 1469, 1477 |
| NsiI | ATGCAT | 2 cut(s) | 1525, 1654 |
| NspI | RCATGY | 3 cut(s) | 951, 1312, 1576 |
| NspV | TTCGAA | 2 cut(s) | 1181, 1239 |
| PaeR7I | CTCGAG | 2 cut(s) | 489, 1264 |
| PciI | ACATGT | 3 cut(s) | 947, 1308, 1572 |
| PctI | GAATGC | 2 cut(s) | 571, 908 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1016 |
| PfeI | GAWTC | 9 cut(s) | 150, 338, 775, 800, 1004, 1017, 1175, 1463, 1600 |
| PkrI | GCNGC | 3 cut(s) | 372, 765, 795 |
| PleI | GAGTC | 3 cut(s) | 189, 443, 718 |
| PpsI | GAGTC | 3 cut(s) | 189, 443, 718 |
| Ppu21I | YACGTR | 1 cut(s) | 1228 |
| PscI | ACATGT | 3 cut(s) | 947, 1308, 1572 |
| PsiI | TTATAA | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 1 cut(s) | 955 |
| PspPI | GGNCC | 3 cut(s) | 829, 1058, 1130 |
| PstNI | CAGNNNCTG | 1 cut(s) | 407 |
| PsuI | RGATCY | 2 cut(s) | 296, 953 |
| RsaI | GTAC | 2 cut(s) | 76, 943 |
| RsaNI | GTAC | 2 cut(s) | 75, 942 |
| RseI | CAYNNNNRTG | 1 cut(s) | 633 |
| SaqAI | TTAA | 4 cut(s) | 132, 396, 923, 1494 |
| SatI | GCNGC | 3 cut(s) | 371, 764, 794 |
| Sau96I | GGNCC | 3 cut(s) | 829, 1058, 1130 |
| SchI | GAGTC | 3 cut(s) | 189, 443, 718 |
| SfaNI | GCATC | 6 cut(s) | 101, 112, 155, 330, 1510, 1639 |
| Sfr274I | CTCGAG | 2 cut(s) | 489, 1264 |
| SfuI | TTCGAA | 2 cut(s) | 1181, 1239 |
| SinI | GGWCC | 3 cut(s) | 829, 1058, 1130 |
| SlaI | CTCGAG | 2 cut(s) | 489, 1264 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 633 |
| SmlI | CTYRAG | 2 cut(s) | 489, 1264 |
| SmoI | CTYRAG | 2 cut(s) | 489, 1264 |
| Sse9I | AATT | 3 cut(s) | 455, 472, 1272 |
| SsiI | CCGC | 7 cut(s) | 6, 419, 1026, 1300, 1345, 1418, 1436 |
| SspI | AATATT | 1 cut(s) | 1362 |
| SspMI | CTAG | 2 cut(s) | 648, 779 |
| StyI | CCWWGG | 1 cut(s) | 1641 |
| TaaI | ACNGT | 6 cut(s) | 755, 833, 1052, 1116, 1394, 1597 |
| TaiI | ACGT | 3 cut(s) | 515, 1230, 1484 |
| TaqII | GACCGA | 1 cut(s) | 1118 |
| TasI | AATT | 3 cut(s) | 455, 472, 1272 |
| TatI | WGTACW | 1 cut(s) | 941 |
| TfiI | GAWTC | 9 cut(s) | 150, 338, 775, 800, 1004, 1017, 1175, 1463, 1600 |
| Tru1I | TTAA | 4 cut(s) | 132, 396, 923, 1494 |
| Tru9I | TTAA | 4 cut(s) | 132, 396, 923, 1494 |
| TscAI | CASTG | 3 cut(s) | 896, 1057, 1602 |
| TseFI | GTSAC | 4 cut(s) | 934, 1441, 1469, 1477 |
| TseI | GCWGC | 3 cut(s) | 370, 763, 793 |
| Tsp45I | GTSAC | 4 cut(s) | 934, 1441, 1469, 1477 |
| TspDTI | ATGAA | 5 cut(s) | 6, 578, 578, 805, 1025 |
| TspGWI | ACGGA | 2 cut(s) | 27, 1284 |
| TspRI | CASTG | 3 cut(s) | 896, 1057, 1602 |
| VpaK11BI | GGWCC | 3 cut(s) | 829, 1058, 1130 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XceI | RCATGY | 3 cut(s) | 951, 1312, 1576 |
| XhoI | CTCGAG | 2 cut(s) | 489, 1264 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1016 |
| XspI | CTAG | 2 cut(s) | 648, 779 |
| Zsp2I | ATGCAT | 2 cut(s) | 1525, 1654 |