Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007919

Physical Location & Seq

Genomic Coordinates Reverse (-)

3448535 .. 3454286

Gene Structure 5752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G10940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGATAATCTCAGTTTTCACGATGGTAACATCTTCAATCTCCTCCACACAAGGTCCCAGGACCCAAGTCATGAGGTTGATCAAAGAATGCAGTTTCACTCTTCCTTGGTTCGGAGACTTTCTCAGGAGCAAGAATTGGAGGGACATCAAGGCTGTGTTAATGCTTTAGCGTGGAACTCTAATGGTTCACTTTTGATATCTGGATCAGATGATTTAAGGATCAATATTTGGAATTACTCCAGTCGGAAGCTTTTGCATTCTATAGATACAGGGCATACTGCCAACATCTTCTGTACGAAGTTTGTCCCTGAAACCTCTGACGAGCTTGTGGTATCTGGTGCTGGAGATGCTGAGGTTAGGCTATTCAATACATCCCGGTTAAGCGGTAGAGCAGAAGATGACAATGCTATTATTCCATCAGCATTGTACCAATGTCACACACGAAGAGTGAAAAAACTAGCTGTCGAACCTGGTAACCCCAATGTTGTATGGAGTGCTAGTGAAGATGGGACTTTAAGGCAGCATGATTTCCGGGAATCTACCTCTTGTCCTCCTGCTGGAACCGCTCACCAAGAATGCCGCAGTGTTCTGCTTGATCTGCGCAGTGGTGCCAAAAGAGCACTAGCTGATCCTCCAAAGCAAACTCTCTCCCTGAAGTCTTGTGATATAAGTGCCACAAGACCGCACCTACTTCTTGTTGGTGGAAGTGATGCATTTGCTCGTTTATACGATAGAAGGATGCTCCCACCGTTGGCATCAAGTCGGAAAAGGATGCCTCCACCTCCGTGTGTCAATTACTTCTGTCCCATGCATCTTTCTGAACGTGGGCGAACAAATTTGCACCTAACACATGTTACTTTCAGTCCTAATGGCGAAGAAGTTTTGCTCAGTTACAGTGGGGAGCATGTCTACCTGATGAATGTAAATAATGGTATTTGCAGCACTGGAATCATGCAATACACACCAGGAGATGTAGATAACTTGTTTTCTTTCAGTAACAACCTCCACGATGTAGAATCTCCACCTCAGGTTTCCACCACTCCTCAAAATGGCTTTCACAGAAGTAGCAATGCTGCAACGGTTAAGAAGTGTACGGAATTGGTAGAAATTGCTAAATGGTCTTTAGAAGAGGGTACAGATGTTTTCTATGCAATTGAGGCAGCTAATGAAGTTCTGGATGCTCATTCTAATGATATTGAGTCTGCGCTAAGGCATGAATGCCTTTGTACTCGTGCCGCATTGTTACTCAAGAGGAAGTGGAAGAATGATGCTCATATGGCCGTAAGAGATTGCCATAATGCTCGGAGAATTGATGCTTCATCCTTTAAAGCTCATTACTACATGTCTGAAGCGCTGCAGCAATTGGGAAAATGTAAAGAAGCTCTAGATTTTGCGACTGCTGCACAACATATGAACCCATCAGATGCCGATATAGTGGCAAAAGTGGAGAGCATTAAAAGGGATCTTCAAGCAGCTGGAGCTGAGAAAAACGAAGAGACAGGAGCTGGAACTACTAGAGTACTTTCTTTAAGCGACATACTATATAGATCAGAGGCCAACAGTGACAGTTCACATGATATGTCGAGATCCGAAAGAGAAGATTCTGATTATGATGAGGAATTGGAGTTGGATATTCAAACTTCGTTGTCTGATGATGAAGGACGAGATACAGACTCAAATTCTATGCGTGGCAGTCTCAACTTACGAATTCATAGAGTAGGTGATGATAAACCGATGGAAAATACAGTTGACAATGCCTCCTCAGGAACTGCATCGTCATCTCAAAATGATAGGACGTCTTATCAGCCAGAGGGAGCCATTGATATGAAACGTAGATATGTTGGCCACTGTAACGTAGGAACTGATATTAAGCAGGCCAGTTTTCTTGGTCAGAGAGGTGAATATATTGCAAGTGGAAGCGATGACGGTCGGTGGTTTATATGGGAGAAACAGACTGGAAGGCTTATGAAAGTGCTCGTTGGCGATGAATCAGTTTTGAACTGCATTCAATGCCATCCGTTTGATAGTGTTGTAGCAACGAGTGGAATTGATAACACAATAAAGATATGGAGCCCAACCGCATCAGTCCCATCAATTGTAGCAGGAGGATCAGCTGGACCAGCAACCGCCAATGTAGTGGAAGTAATGGAGAGTAATCAACAGAAGCTAAGCCGCAATCGAGAGAATCCTCTGTCTGTGGAGCTAATGCAAAGGTTTAGGATGCAAGAATTTGCAGAAGGAAACTTTCACCCATTTGAATGTACTCAGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0019538 GO:0031974 GO:0031981 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

757

Amino Acids

83.83

Weight (kDa)

5.54

Isoelectric Point (pI)

50.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	27 - 125	3.6e-11	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	33 - 125	1.5e-07	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	37 - 179	3.2e-18	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	41 - 125	1.3e-12	WDR3 first beta-propeller domain
WDR55	PF24796	42 - 183	6.5e-07	WDR55
WD40	PF00400	43 - 78	1.2e-08	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	49 - 125	1.9e-11	THOC3 beta-propeller domain
WD40_Prp19	PF24814	52 - 181	1.2e-12	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	606 - 688	6.4e-13	WDR5 beta-propeller domain
WD40_Prp19	PF24814	627 - 691	7.7e-06	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	629 - 688	6.7e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10940 AT5G10940
fragaria_vesca	FvH4_5g35830 FvH4_5g35830 FvH4_5g35830
malus_domestica	MD08G1192800.v1.1 MD15G1381500.v1.1
prunus_persica	Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1
pyrus_communis	pycom08g16630 pycom15g34170
rosa_chinensis	RchiOBHm_Chr7g0237521
rosa_laevigata	RLG00000000996
rosa_multiflora	Rmu_ssc0000152.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224060
rosa_rugosa	Rorug07G0303800 Rorug07G0303900
rosa_samantha	Rh7AG461500 Rh7BG431700 Rh7CG478700 Rh7DG447900
rosa_wichuraiana	Rw7G038190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1799
Acc16I	TGCGCA	1 cut(s)	602
AccB1I	GGYRCC	1 cut(s)	608
AccBSI	CCGCTC	1 cut(s)	566
AccI	GTMKAC	1 cut(s)	909
AciI	CCGC	8 cut(s)	384, 564, 580, 683, 1236, 2079, 2127, 2173
AclWI	GGATC	6 cut(s)	211, 227, 623, 1470, 1581, 2116
AcoI	YGGCCR	2 cut(s)	1278, 1843
AcsI	RAATTY	4 cut(s)	835, 1678, 1707, 2228
AcuI	CTGAAG	2 cut(s)	674, 1368
AcyI	GRCGYC	1 cut(s)	1796
AfaI	GTAC	7 cut(s)	295, 428, 1093, 1135, 1228, 1521, 2263
AfeI	AGCGCT	1 cut(s)	1353
AfiI	CCNNNNNNNGG	4 cut(s)	111, 557, 751, 1049
AflIII	ACRYGT	2 cut(s)	850, 1341
AgsI	TTSAA	7 cut(s)	37, 367, 1469, 1637, 1999, 2009, 2258
AjnI	CCWGG	3 cut(s)	57, 469, 964
AleI	CACNNNNGTG	1 cut(s)	784
Alw21I	GWGCWC	2 cut(s)	622, 1977
Alw26I	GTCTC	3 cut(s)	109, 1490, 1700
AlwI	GGATC	6 cut(s)	211, 227, 623, 1470, 1581, 2116
AlwNI	CAGNNNCTG	2 cut(s)	1505, 1769
Aor51HI	AGCGCT	1 cut(s)	1353
AoxI	GGCC	4 cut(s)	1278, 1554, 1843, 1875
ApeKI	GCWGC	8 cut(s)	520, 939, 1073, 1160, 1354, 1357, 1400, 1472
ApoI	RAATTY	4 cut(s)	835, 1678, 1707, 2228
AspLEI	GCGC	3 cut(s)	603, 1207, 1354
AspS9I	GGNCC	3 cut(s)	54, 61, 2117
AsuC2I	CCSGG	2 cut(s)	376, 533
AsuHPI	GGTGA	4 cut(s)	560, 1733, 1910, 2240
AvaII	GGWCC	3 cut(s)	54, 61, 2117
AxyI	CCTNAGG	2 cut(s)	1026, 1762
BaeI	ACNNNNGTAYC	2 cut(s)	1125, 1158
BalI	TGGCCA	1 cut(s)	1845
BanI	GGYRCC	1 cut(s)	608
BanII	GRGCYC	1 cut(s)	2075
BauI	CACGAG	1 cut(s)	1230
Bbv12I	GWGCWC	2 cut(s)	622, 1977
BbvCI	CCTCAGC	1 cut(s)	351
BbvI	GCAGC	8 cut(s)	532, 951, 1060, 1172, 1341, 1369, 1387, 1484
BccI	CCATC	7 cut(s)	17, 424, 500, 1426, 1729, 2022, 2098
BceAI	ACGGC	1 cut(s)	1265
BciT130I	CCWGG	3 cut(s)	59, 471, 966
BclI	TGATCA	1 cut(s)	79
BcnI	CCSGG	2 cut(s)	376, 533
BcoDI	GTCTC	3 cut(s)	109, 1490, 1700
BfaI	CTAG	5 cut(s)	458, 498, 623, 1385, 1515
BfmI	CTRYAG	2 cut(s)	261, 1355
BfoI	RGCGCY	1 cut(s)	1355
BlpI	GCTNAGC	1 cut(s)	2168
BmcAI	AGTACT	1 cut(s)	1521
Bme1390I	CCNGG	5 cut(s)	59, 376, 471, 533, 966
Bme18I	GGWCC	3 cut(s)	54, 61, 2117
BmgT120I	GGNCC	3 cut(s)	54, 61, 2117
BmiI	GGNNCC	6 cut(s)	56, 63, 562, 610, 1816, 2072
BmrFI	CCNGG	5 cut(s)	59, 376, 471, 533, 966
BoxI	GACNNNNGTC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	106, 138
BpmI	CTGGAG	3 cut(s)	223, 363, 1497
Bpu10I	CCTNAGC	2 cut(s)	351, 1208
Bpu1102I	GCTNAGC	1 cut(s)	2168
BpuEI	CTTGAG	1 cut(s)	1232
BpuMI	CCSGG	2 cut(s)	376, 533
BsaHI	GRCGYC	1 cut(s)	1796
BsaJI	CCNNGG	2 cut(s)	57, 105
BsaXI	ACNNNNNCTCC	4 cut(s)	484, 514, 1742, 1772
Bsc4I	CCNNNNNNNGG	4 cut(s)	111, 557, 751, 1049
Bse1I	ACTGG	4 cut(s)	240, 949, 1878, 1960
Bse21I	CCTNAGG	2 cut(s)	1026, 1762
Bse3DI	GCAATG	1 cut(s)	1075
BseBI	CCWGG	3 cut(s)	59, 471, 966
BseDI	CCNNGG	2 cut(s)	57, 105
BseGI	GGATG	7 cut(s)	371, 744, 777, 1183, 1319, 2014, 2226
BseLI	CCNNNNNNNGG	4 cut(s)	111, 557, 751, 1049
BseMI	GCAATG	1 cut(s)	1075
BseMII	CTCAG	7 cut(s)	25, 137, 342, 901, 1040, 1473, 1776
BseNI	ACTGG	4 cut(s)	240, 949, 1878, 1960
BseRI	GAGGAG	3 cut(s)	32, 1032, 1750
BseXI	GCAGC	8 cut(s)	532, 951, 1060, 1172, 1341, 1369, 1387, 1484
BsgI	GTGCAG	1 cut(s)	1386
Bsh1285I	CGRYCG	1 cut(s)	1930
BshFI	GGCC	4 cut(s)	1280, 1556, 1845, 1877
BshNI	GGYRCC	1 cut(s)	608
BsiEI	CGRYCG	1 cut(s)	1930
BsiHKAI	GWGCWC	2 cut(s)	622, 1977
BsiSI	CCGG	2 cut(s)	376, 532
BslFI	GGGAC	6 cut(s)	40, 156, 290, 523, 789, 2072
BslI	CCNNNNNNNGG	4 cut(s)	111, 557, 751, 1049
BsmAI	GTCTC	3 cut(s)	109, 1490, 1700
BsmFI	GGGAC	6 cut(s)	40, 156, 290, 523, 789, 2072
BsmI	GAATGC	5 cut(s)	93, 256, 581, 1223, 2004
BsnI	GGCC	4 cut(s)	1280, 1556, 1845, 1877
Bsp1286I	GDGCHC	3 cut(s)	622, 1977, 2075
Bsp143I	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
Bsp1720I	GCTNAGC	1 cut(s)	2168
BspACI	CCGC	8 cut(s)	384, 564, 580, 683, 1236, 2079, 2127, 2173
BspANI	GGCC	4 cut(s)	1280, 1556, 1845, 1877
BspCNI	CTCAG	7 cut(s)	24, 136, 343, 900, 1039, 1474, 1775
BspHI	TCATGA	1 cut(s)	70
BspLI	GGNNCC	6 cut(s)	56, 63, 562, 610, 1816, 2072
BspMAI	CTGCAG	1 cut(s)	1359
BspPI	GGATC	6 cut(s)	211, 227, 623, 1470, 1581, 2116
BspT107I	GGYRCC	1 cut(s)	608
BsrBI	CCGCTC	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	1075
BsrI	ACTGG	4 cut(s)	240, 949, 1878, 1960
BssECI	CCNNGG	2 cut(s)	57, 105
BssMI	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
BssNI	GRCGYC	1 cut(s)	1796
BssSI	CACGAG	1 cut(s)	1230
BssT1I	CCWWGG	1 cut(s)	105
Bst2BI	CACGAG	1 cut(s)	1230
Bst2UI	CCWGG	3 cut(s)	59, 471, 966
Bst4CI	ACNGT	8 cut(s)	750, 896, 1081, 1562, 1568, 1747, 1850, 1928
Bst6I	CTCTTC	4 cut(s)	106, 439, 1122, 1488
BstACI	GRCGYC	1 cut(s)	1796
BstAPI	GCANNNNNTGC	1 cut(s)	2010
BstC8I	GCNNGC	1 cut(s)	1875
BstEII	GGTNACC	1 cut(s)	473
BstF5I	GGATG	7 cut(s)	371, 744, 777, 1183, 1319, 2014, 2226
BstH2I	RGCGCY	1 cut(s)	1355
BstHHI	GCGC	3 cut(s)	603, 1207, 1354
BstKTI	GATC	9 cut(s)	82, 206, 222, 598, 631, 1465, 1550, 1589, 2111
BstMAI	GTCTC	3 cut(s)	109, 1490, 1700
BstMBI	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
BstMCI	CGRYCG	1 cut(s)	1930
BstNI	CCWGG	3 cut(s)	59, 471, 966
BstNSI	RCATGY	3 cut(s)	854, 908, 1345
BstPAI	GACNNNNGTC	1 cut(s)	66
BstPI	GGTNACC	1 cut(s)	473
BstSCI	CCNGG	5 cut(s)	57, 374, 469, 531, 964
BstSFI	CTRYAG	2 cut(s)	261, 1355
BstV1I	GCAGC	8 cut(s)	532, 951, 1060, 1172, 1341, 1369, 1387, 1484
BstX2I	RGATCY	2 cut(s)	1462, 1586
BstXI	CCANNNNNNTGG	1 cut(s)	2137
BstYI	RGATCY	2 cut(s)	1462, 1586
Bsu36I	CCTNAGG	2 cut(s)	1026, 1762
BsuRI	GGCC	4 cut(s)	1280, 1556, 1845, 1877
BtgZI	GCGATG	2 cut(s)	1935, 1998
BtsCI	GGATG	7 cut(s)	371, 744, 777, 1183, 1319, 2014, 2226
BtsI	GCAGTG	2 cut(s)	589, 610
BtsIMutI	CAGTG	6 cut(s)	589, 610, 901, 942, 1567, 1846
Cac8I	GCNNGC	1 cut(s)	1875
CaiI	CAGNNNCTG	2 cut(s)	1505, 1769
CciI	TCATGA	1 cut(s)	70
CfoI	GCGC	3 cut(s)	603, 1207, 1354
Cfr13I	GGNCC	3 cut(s)	54, 61, 2117
CsiI	ACCWGGT	1 cut(s)	469
Csp6I	GTAC	7 cut(s)	294, 427, 1092, 1134, 1227, 1520, 2262
CviAII	CATG	9 cut(s)	71, 524, 808, 851, 905, 952, 1214, 1342, 1574
CviQI	GTAC	7 cut(s)	294, 427, 1092, 1134, 1227, 1520, 2262
DpnI	GATC	9 cut(s)	81, 205, 221, 597, 630, 1464, 1549, 1588, 2110
DpnII	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
DraI	TTTAAA	1 cut(s)	1327
EaeI	YGGCCR	2 cut(s)	1278, 1843
Eam1104I	CTCTTC	4 cut(s)	106, 439, 1122, 1488
EarI	CTCTTC	4 cut(s)	106, 439, 1122, 1488
Eco130I	CCWWGG	1 cut(s)	105
Eco24I	GRGCYC	1 cut(s)	2075
Eco32I	GATATC	1 cut(s)	198
Eco47I	GGWCC	3 cut(s)	54, 61, 2117
Eco47III	AGCGCT	1 cut(s)	1353
Eco57I	CTGAAG	2 cut(s)	674, 1368
Eco81I	CCTNAGG	2 cut(s)	1026, 1762
Eco91I	GGTNACC	1 cut(s)	473
EcoO109I	RGGNCCY	2 cut(s)	54, 61
EcoO65I	GGTNACC	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	1707
EcoRII	CCWGG	3 cut(s)	57, 469, 964
EcoRV	GATATC	1 cut(s)	198
EcoT14I	CCWWGG	1 cut(s)	105
EcoT22I	ATGCAT	2 cut(s)	715, 813
EcoT38I	GRGCYC	1 cut(s)	2075
ErhI	CCWWGG	1 cut(s)	105
FaeI	CATG	9 cut(s)	74, 527, 811, 854, 908, 955, 1217, 1345, 1577
FaqI	GGGAC	6 cut(s)	40, 156, 290, 523, 789, 2072
FatI	CATG	9 cut(s)	70, 523, 807, 850, 904, 951, 1213, 1341, 1573
FauNDI	CATATG	2 cut(s)	1275, 1410
FbaI	TGATCA	1 cut(s)	79
FblI	GTMKAC	1 cut(s)	909
FokI	GGATG	7 cut(s)	358, 751, 784, 1190, 1306, 2001, 2233
FriOI	GRGCYC	1 cut(s)	2075
FspBI	CTAG	5 cut(s)	458, 498, 623, 1385, 1515
FspI	TGCGCA	1 cut(s)	602
GlaI	GCGC	3 cut(s)	602, 1206, 1353
GsuI	CTGGAG	3 cut(s)	223, 363, 1497
HaeII	RGCGCY	1 cut(s)	1355
HaeIII	GGCC	4 cut(s)	1280, 1556, 1845, 1877
HapII	CCGG	2 cut(s)	376, 532
HhaI	GCGC	3 cut(s)	603, 1207, 1354
Hin1I	GRCGYC	1 cut(s)	1796
Hin1II	CATG	9 cut(s)	74, 527, 811, 854, 908, 955, 1217, 1345, 1577
Hin6I	GCGC	3 cut(s)	601, 1205, 1352
HinP1I	GCGC	3 cut(s)	601, 1205, 1352
HincII	GTYRAC	1 cut(s)	1750
HindII	GTYRAC	1 cut(s)	1750
HindIII	AAGCTT	1 cut(s)	248
HinfI	GANTC	8 cut(s)	536, 948, 1016, 1199, 1601, 1673, 1988, 2185
HpaII	CCGG	2 cut(s)	376, 532
HphI	GGTGA	4 cut(s)	560, 1733, 1910, 2240
Hpy166II	GTNNAC	5 cut(s)	188, 910, 1092, 1571, 1750
Hpy8I	GTNNAC	5 cut(s)	188, 910, 1092, 1571, 1750
HpyAV	CCTTC	4 cut(s)	729, 1652, 1953, 2231
HpyCH4III	ACNGT	8 cut(s)	750, 896, 1081, 1562, 1568, 1747, 1850, 1928
HpyCH4IV	ACGT	4 cut(s)	823, 1796, 1831, 1854
HpySE526I	ACGT	4 cut(s)	823, 1796, 1831, 1854
Hsp92I	GRCGYC	1 cut(s)	1796
Hsp92II	CATG	9 cut(s)	74, 527, 811, 854, 908, 955, 1217, 1345, 1577
HspAI	GCGC	3 cut(s)	601, 1205, 1352
Ksp22I	TGATCA	1 cut(s)	79
Kzo9I	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
LmnI	GCTCC	8 cut(s)	127, 747, 901, 1478, 1502, 1814, 2070, 2200
Lsp1109I	GCAGC	8 cut(s)	532, 951, 1060, 1172, 1341, 1369, 1387, 1484
MabI	ACCWGGT	1 cut(s)	469
MaeI	CTAG	5 cut(s)	458, 498, 623, 1385, 1515
MaeII	ACGT	4 cut(s)	823, 1796, 1831, 1854
MaeIII	GTNAC	9 cut(s)	26, 434, 473, 853, 890, 995, 1242, 1562, 1850
MalI	GATC	9 cut(s)	81, 205, 221, 597, 630, 1464, 1549, 1588, 2110
MbiI	CCGCTC	1 cut(s)	566
MboI	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
MfeI	CAATTG	3 cut(s)	1152, 1361, 2094
MflI	RGATCY	2 cut(s)	1462, 1586
MhlI	GDGCHC	3 cut(s)	622, 1977, 2075
MlsI	TGGCCA	1 cut(s)	1845
MluNI	TGGCCA	1 cut(s)	1845
MlyI	GAGTC	2 cut(s)	1208, 1667
MmeI	TCCRAC	3 cut(s)	224, 743, 1608
Mox20I	TGGCCA	1 cut(s)	1845
Mph1103I	ATGCAT	2 cut(s)	715, 813
MscI	TGGCCA	1 cut(s)	1845
MseI	TTAA	9 cut(s)	159, 215, 380, 515, 1083, 1326, 1455, 1529, 1869
MslI	CAYNNNNRTG	4 cut(s)	784, 1188, 1823, 2257
Msp20I	TGGCCA	1 cut(s)	1845
MspA1I	CMGCKG	2 cut(s)	1475, 2114
MspI	CCGG	2 cut(s)	376, 532
MspR9I	CCNGG	5 cut(s)	59, 376, 471, 533, 966
MunI	CAATTG	3 cut(s)	1152, 1361, 2094
Mva1269I	GAATGC	5 cut(s)	93, 256, 581, 1223, 2004
MvaI	CCWGG	3 cut(s)	59, 471, 966
NciI	CCSGG	2 cut(s)	376, 533
NdeI	CATATG	2 cut(s)	1275, 1410
NdeII	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
NlaIII	CATG	9 cut(s)	74, 527, 811, 854, 908, 955, 1217, 1345, 1577
NlaIV	GGNNCC	6 cut(s)	56, 63, 562, 610, 1816, 2072
NmuCI	GTSAC	2 cut(s)	434, 1562
NsbI	TGCGCA	1 cut(s)	602
NsiI	ATGCAT	2 cut(s)	715, 813
NspI	RCATGY	3 cut(s)	854, 908, 1345
OliI	CACNNNNGTG	1 cut(s)	784
PagI	TCATGA	1 cut(s)	70
PciI	ACATGT	2 cut(s)	850, 1341
PctI	GAATGC	5 cut(s)	93, 256, 581, 1223, 2004
PfeI	GAWTC	6 cut(s)	536, 948, 1016, 1601, 1988, 2185
PfoI	TCCNGGA	1 cut(s)	531
PleI	GAGTC	2 cut(s)	1207, 1667
PpsI	GAGTC	2 cut(s)	1207, 1667
PpuMI	RGGWCCY	2 cut(s)	54, 61
PscI	ACATGT	2 cut(s)	850, 1341
PshAI	GACNNNNGTC	1 cut(s)	66
Psp5II	RGGWCCY	2 cut(s)	54, 61
Psp6I	CCWGG	3 cut(s)	57, 469, 964
PspEI	GGTNACC	1 cut(s)	473
PspGI	CCWGG	3 cut(s)	57, 469, 964
PspN4I	GGNNCC	6 cut(s)	56, 63, 562, 610, 1816, 2072
PspPI	GGNCC	3 cut(s)	54, 61, 2117
PspPPI	RGGWCCY	2 cut(s)	54, 61
PstI	CTGCAG	1 cut(s)	1359
PstNI	CAGNNNCTG	2 cut(s)	1505, 1769
PsuI	RGATCY	2 cut(s)	1462, 1586
PvuII	CAGCTG	2 cut(s)	1475, 2114
RsaI	GTAC	7 cut(s)	295, 428, 1093, 1135, 1228, 1521, 2263
RsaNI	GTAC	7 cut(s)	294, 427, 1092, 1134, 1227, 1520, 2262
RseI	CAYNNNNRTG	4 cut(s)	784, 1188, 1823, 2257
SaqAI	TTAA	9 cut(s)	159, 215, 380, 515, 1083, 1326, 1455, 1529, 1869
Sau3AI	GATC	9 cut(s)	79, 203, 219, 595, 628, 1462, 1547, 1586, 2108
Sau96I	GGNCC	3 cut(s)	54, 61, 2117
ScaI	AGTACT	1 cut(s)	1521
SchI	GAGTC	2 cut(s)	1208, 1667
ScrFI	CCNGG	5 cut(s)	59, 376, 471, 533, 966
SduI	GDGCHC	3 cut(s)	622, 1977, 2075
SexAI	ACCWGGT	1 cut(s)	469
SfcI	CTRYAG	2 cut(s)	261, 1355
SinI	GGWCC	3 cut(s)	54, 61, 2117
SmiMI	CAYNNNNRTG	4 cut(s)	784, 1188, 1823, 2257
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
SsiI	CCGC	8 cut(s)	384, 564, 580, 683, 1236, 2079, 2127, 2173
SspI	AATATT	1 cut(s)	226
SspMI	CTAG	5 cut(s)	458, 498, 623, 1385, 1515
StyD4I	CCNGG	5 cut(s)	57, 374, 469, 531, 964
StyI	CCWWGG	1 cut(s)	105
TaaI	ACNGT	8 cut(s)	750, 896, 1081, 1562, 1568, 1747, 1850, 1928
TaiI	ACGT	4 cut(s)	826, 1799, 1834, 1857
TaqI	TCGA	3 cut(s)	465, 1583, 2179
TatI	WGTACW	3 cut(s)	1226, 1519, 2261
TauI	GCSGC	3 cut(s)	582, 1238, 2175
TfiI	GAWTC	6 cut(s)	536, 948, 1016, 1601, 1988, 2185
Tru1I	TTAA	9 cut(s)	159, 215, 380, 515, 1083, 1326, 1455, 1529, 1869
Tru9I	TTAA	9 cut(s)	159, 215, 380, 515, 1083, 1326, 1455, 1529, 1869
TscAI	CASTG	6 cut(s)	589, 610, 901, 949, 1567, 1853
TseFI	GTSAC	2 cut(s)	434, 1562
TseI	GCWGC	8 cut(s)	520, 939, 1073, 1160, 1354, 1357, 1400, 1472
Tsp45I	GTSAC	2 cut(s)	434, 1562
TspGWI	ACGGA	3 cut(s)	774, 1109, 2007
TspRI	CASTG	6 cut(s)	589, 610, 901, 949, 1567, 1853
VpaK11BI	GGWCC	3 cut(s)	54, 61, 2117
XapI	RAATTY	4 cut(s)	835, 1678, 1707, 2228
XbaI	TCTAGA	1 cut(s)	1384
XceI	RCATGY	3 cut(s)	854, 908, 1345
XmiI	GTMKAC	1 cut(s)	909
XspI	CTAG	5 cut(s)	458, 498, 623, 1385, 1515
ZraI	GACGTC	1 cut(s)	1797
ZrmI	AGTACT	1 cut(s)	1521
Zsp2I	ATGCAT	2 cut(s)	715, 813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.