Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007919

Physical Location & Seq

Genomic Coordinates Reverse (-)

33790820 .. 33801884

Gene Structure 11065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g34170.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGAAGGCGTCCCTTTTCACGACGGCAACATCCACGACTTGATTGCAAGACGATACGTCGACGTTCGGCAAGATGCCAATCACAGGTTGCAGATGCACTCGTCGTTGGTGCGAAGGCTTTCTCAGGAAAGAGAATTGGAGGGGCATCAAGGTTGTGTTAATTCCATTGCTTGGAATTCGAATGGCTCGCTTTTAATGTCTGGATCAGATGACACACGGATAAATATCTGGAGCTACTCTAGTCGGAAGCTTTTGCATTCTATAGAGACTGGGCACAGTGCGAACATATTTTGTACAAAATTTGTCCCTGAAACTTCTGATGAGCTTGTGGTCTCTGGAGCTGGAGATGCAGAAGTTCGATTATTTAATTTGTCTCGTTTAAGTGGGAGAGGAACTGATGATAATGCTATTTCTCCATCAGCTGTGTATCAATGCCATAGTAGAAGAGTAAAAAAGTTAGCTGTTGAAGTTGGAAATCCCAATGTGGTATGGAGTGCAAGTGAAGATGGAACTTTGAGACAGCATGACTTCCGAGAGGGCACTTCTTGCCCACCTGCTGGATCCACTAATCAAGAATGTCGCAATGTTTTGCTTGACTTGCGGTGTGGAGCAAAGAAGTCACTTGCTGATCCCCCCAAGCAAAATTTTTCTTTAAAATCTTGTGATATCAGTTCCACTAGACCTCATTTGCTCCTAGTTGGTGGGAGTGATGCATTTGCCCGTTTATATGATAGAAGGATGCTGCCACCACTGACATCCTGTCGGAAACGGAGAGCACCACCTCCTTGTGTTAACTATTTTTGTCCAATGCATCTCTCCGAACGTGGACGTGCTAGCTTGCATTTGACTCATGTTGCATTTAGTCCAGACGGAGAAGAGGTTCTACTTAGTTATAGTGGGGAGCACATATATTTGATGAATGTAAATCATGCTGGTGAGAGTGCTATGCAGTATACTTCTGGAGATGTTTTGAAACTAACCAGCTTCAGTCCTATACTCAATGGAGTCGAACTGCATCAACCAGCATCCAATGTGTTCAGAAATGGTCTTCCCAAAAGAGGCAACGTTGCTGCTAGGTTTGAGAAGTGCAGGAATCTAATTGAAATTGCTGAGCGGTCCTTGGAGGAGGGGACAGATTATTTTTATGGCATTGAAGCGTGCAATGAGGTGTTGGATGGAAATGGTTGTGATATTGGGCCTACACTAAAGCATGATTGCCTTTGTATTCGTGCGGCATTGTTGCTTAAGCGCCAGTGGAAAAATGATGTTCATATGGCTATAAGAGATTGTTATAATGCTCGGAGGCTCATTAGCTCCTCTTACAGAGCTCATTACTATATGTCTGAAGCTTTATCGCAGTTGGCTAAACATAAAGAAGCTCTGGAATTTGCTATCGCAGCCCAATCTTTGGCTCCATCAAATTCTCAAGTAGCAGAACGATTGGAGCGTGTACAAGGGGATCTTGCTGCAGTTGAATCTGAAAGAAATAGTAAGCCAAATGATGGAGCACTGAGGTCTGAACCTCGAGGTGAAAGAGTTCTATCACTCAGTGACATACTCTACCGATCAGAGGGTAATAGTGATGTTTCACAAGATGGTCCAAGATCTGAAAGAGAAGATTCTGATTATGATGAGGAACTAGAGCTGGACTTTGAAACGTCGATCTCAGGTGATGAAGAGCATGATATCGAGCCCAATATTGTACAAGGAAGCTTAAACTTGAGAATTCATCGAAGAAGTGATTCTGCTAGAGAAGTTGGTGGTGCAAACGGCCCATCTGGATCCCCCTCTTCGTCATCTCAAAATGAAAGAATACCATATCAGCCTGAGGCAGTTATTGATATGAAACAGAGATATGTTGGCCATTGTAATGTTGGAACGGACATAAAACAGGCCAGCTTTCTTGGCCAGCGAGGTGAATATGTTGCTAGCGGAAGTGATGATGGCAGATGGTTTGTCTGGGAAAAGCGAACTGGTAGACTGATAAAAATGCTTCAAGGAGATGAAACTGTTGTGAACTGTGTACAGTGCCATCCGGTTGATTGTGTTGTGGCAACTAGTGGAATTGACAACACAATAAAAATTTGGACCCCCAGTGCCTCAGTCCCATCTATTGTGGCTGGTGGAGCCGCTGGACCAGAAAATGCTGACATTTCGTTAGTCATGGAATCCAATCAGCGCAGATTAAGCCATAATCGTGAGACTATCCTGTACAGCCATTCTGAAATTTTGGAGCATTTTCGAATGCACGAGTTTGCTGAAGGAAGCTTGCACCCATTTGAGTGTGCCCAGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0019538 GO:0031974 GO:0031981 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

766

Amino Acids

84.83

Weight (kDa)

5.87

Isoelectric Point (pI)

55.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10940 AT5G10940
fragaria_vesca	FvH4_5g35830 FvH4_5g35830 FvH4_5g35830
malus_domestica	MD08G1192800.v1.1 MD15G1381500.v1.1
prunus_persica	Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1 Prupe.1G527400_v2.0.a1
pyrus_communis	pycom08g16630 pycom15g34170
rosa_chinensis	RchiOBHm_Chr7g0237521
rosa_laevigata	RLG00000000996
rosa_multiflora	Rmu_ssc0000152.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224060
rosa_rugosa	Rorug07G0303800 Rorug07G0303900
rosa_samantha	Rh7AG461500 Rh7BG431700 Rh7CG478700 Rh7DG447900
rosa_wichuraiana	Rw7G038190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1293
AarI	CACCTGC	1 cut(s)	562
AbsI	CCTCGAGG	1 cut(s)	1524
Acc36I	ACCTGC	1 cut(s)	562
AccB7I	CCANNNNNTGG	4 cut(s)	171, 557, 1408, 1502
AccBSI	CCGCTC	1 cut(s)	1114
AccI	GTMKAC	3 cut(s)	60, 953, 1978
AciI	CCGC	5 cut(s)	601, 1114, 1232, 1932, 2130
AclI	AACGTT	1 cut(s)	1065
AclWI	GGATC	7 cut(s)	211, 555, 568, 623, 1467, 1776, 1789
AcoI	YGGCCR	2 cut(s)	1861, 1906
AcsI	RAATTY	8 cut(s)	175, 299, 643, 1385, 1420, 1725, 2082, 2226
AcuI	CTGAAG	3 cut(s)	970, 1365, 2280
AcyI	GRCGYC	1 cut(s)	9
AdeI	CACNNNGTG	1 cut(s)	1550
AfaI	GTAC	5 cut(s)	295, 1452, 1704, 2025, 2213
AfiI	CCNNNNNNNGG	7 cut(s)	84, 171, 557, 1058, 1408, 1502, 1570
AflII	CTTAAG	1 cut(s)	1244
AgsI	TTSAA	7 cut(s)	467, 973, 1103, 1154, 1475, 1655, 1997
AhdI	GACNNNNNGTC	2 cut(s)	56, 759
AhlI	ACTAGT	1 cut(s)	2057
AjiI	CACGTC	1 cut(s)	830
AloI	GAACNNNNNNTCC	2 cut(s)	864, 896
Alw21I	GWGCWC	4 cut(s)	778, 906, 1330, 1510
Alw26I	GTCTC	5 cut(s)	260, 337, 378, 511, 2195
AlwI	GGATC	7 cut(s)	211, 555, 568, 623, 1467, 1776, 1789
Ama87I	CYCGRG	1 cut(s)	1524
AoxI	GGCC	5 cut(s)	1196, 1771, 1861, 1893, 1906
ApeKI	GCWGC	4 cut(s)	742, 1070, 1397, 1466
ApoI	RAATTY	8 cut(s)	175, 299, 643, 1385, 1420, 1725, 2082, 2226
Asp700I	GAANNNNTTC	4 cut(s)	118, 879, 1536, 1741
AspLEI	GCGC	2 cut(s)	1251, 2181
AspS9I	GGNCC	6 cut(s)	1116, 1196, 1598, 1772, 2088, 2135
AsuHPI	GGTGA	4 cut(s)	947, 1541, 1682, 1928
AsuII	TTCGAA	2 cut(s)	179, 2242
AsuNHI	GCTAGC	2 cut(s)	833, 1928
AvaI	CYCGRG	1 cut(s)	1524
AvaII	GGWCC	4 cut(s)	1116, 1598, 2088, 2135
AxyI	CCTNAGG	1 cut(s)	1827
BaeGI	GKGCMC	3 cut(s)	276, 542, 2290
BalI	TGGCCA	2 cut(s)	1863, 1908
BamHI	GGATCC	2 cut(s)	560, 1781
BanII	GRGCYC	2 cut(s)	1330, 1695
BarI	GAAGNNNNNNTAC	2 cut(s)	867, 899
BauI	CACGAG	1 cut(s)	2249
BbsI	GAAGAC	1 cut(s)	1040
Bbv12I	GWGCWC	4 cut(s)	778, 906, 1330, 1510
BbvI	GCAGC	4 cut(s)	729, 1057, 1409, 1453
BceAI	ACGGC	2 cut(s)	40, 1786
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BcoDI	GTCTC	5 cut(s)	260, 337, 378, 511, 2195
BcuI	ACTAGT	1 cut(s)	2057
BfaI	CTAG	9 cut(s)	240, 678, 695, 834, 1074, 1640, 1749, 1929, 2058
BfmI	CTRYAG	2 cut(s)	261, 1467
BfoI	RGCGCY	1 cut(s)	1252
BfrI	CTTAAG	1 cut(s)	1244
BfuAI	ACCTGC	1 cut(s)	562
BglII	AGATCT	1 cut(s)	1604
BisI	GCNGC	6 cut(s)	743, 1071, 1233, 1398, 1467, 2130
BlpI	GCTNAGC	1 cut(s)	1110
BlsI	GCNGC	6 cut(s)	744, 1072, 1234, 1399, 1468, 2131
Bme18I	GGWCC	4 cut(s)	1116, 1598, 2088, 2135
BmeRI	GACNNNNNGTC	2 cut(s)	56, 759
BmeT110I	CYCGRG	1 cut(s)	1524
BmgBI	CACGTC	1 cut(s)	830
BmgT120I	GGNCC	6 cut(s)	1116, 1196, 1598, 1772, 2088, 2135
BmiI	GGNNCC	5 cut(s)	562, 1413, 1783, 2090, 2128
BmrI	ACTGGG	2 cut(s)	279, 2088
BmsI	GCATC	9 cut(s)	64, 84, 154, 337, 700, 729, 820, 1024, 1034
BmtI	GCTAGC	2 cut(s)	837, 1932
BmuI	ACTGGG	2 cut(s)	279, 2088
BpiI	GAAGAC	1 cut(s)	1040
BpmI	CTGGAG	4 cut(s)	250, 357, 363, 981
Bpu1102I	GCTNAGC	1 cut(s)	1110
Bpu14I	TTCGAA	2 cut(s)	179, 2242
BpuEI	CTTGAG	2 cut(s)	1410, 1741
BsaBI	GATNNNNATC	2 cut(s)	78, 224
BsaHI	GRCGYC	1 cut(s)	9
BsaI	GGTCTC	1 cut(s)	337
BsaJI	CCNNGG	1 cut(s)	1119
BsaWI	WCCGGW	1 cut(s)	2035
BsaXI	ACNNNNNCTCC	4 cut(s)	484, 514, 864, 894
Bsc4I	CCNNNNNNNGG	7 cut(s)	84, 171, 557, 1058, 1408, 1502, 1570
Bse1I	ACTGG	4 cut(s)	274, 1252, 1978, 2094
Bse21I	CCTNAGG	1 cut(s)	1827
Bse3DI	GCAATG	3 cut(s)	165, 589, 1168
Bse8I	GATNNNNATC	2 cut(s)	78, 224
BseDI	CCNNGG	1 cut(s)	1119
BseGI	GGATG	6 cut(s)	30, 744, 755, 1025, 1180, 2032
BseJI	GATNNNNATC	2 cut(s)	78, 224
BseLI	CCNNNNNNNGG	7 cut(s)	84, 171, 557, 1058, 1408, 1502, 1570
BseMI	GCAATG	3 cut(s)	165, 589, 1168
BseMII	CTCAG	7 cut(s)	137, 1101, 1502, 1561, 1680, 1818, 2115
BseNI	ACTGG	4 cut(s)	274, 1252, 1978, 2094
BseRI	GAGGAG	2 cut(s)	1139, 1306
BseSI	GKGCMC	3 cut(s)	276, 542, 2290
BseXI	GCAGC	4 cut(s)	729, 1057, 1409, 1453
BsgI	GTGCAG	1 cut(s)	1108
BshFI	GGCC	5 cut(s)	1198, 1773, 1863, 1895, 1908
BsiHKAI	GWGCWC	4 cut(s)	778, 906, 1330, 1510
BsiHKCI	CYCGRG	1 cut(s)	1524
BsiSI	CCGG	1 cut(s)	2036
BslFI	GGGAC	3 cut(s)	290, 1144, 2090
BslI	CCNNNNNNNGG	7 cut(s)	84, 171, 557, 1058, 1408, 1502, 1570
BsmAI	GTCTC	5 cut(s)	260, 337, 378, 511, 2195
BsmFI	GGGAC	3 cut(s)	290, 1144, 2090
BsmI	GAATGC	2 cut(s)	256, 2250
BsnI	GGCC	5 cut(s)	1198, 1773, 1863, 1895, 1908
Bso31I	GGTCTC	1 cut(s)	337
BsoBI	CYCGRG	1 cut(s)	1524
Bsp119I	TTCGAA	2 cut(s)	179, 2242
Bsp1286I	GDGCHC	8 cut(s)	276, 542, 778, 906, 1330, 1510, 1695, 2290
Bsp1407I	TGTACA	5 cut(s)	293, 1450, 1702, 2023, 2211
Bsp143I	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
Bsp1720I	GCTNAGC	1 cut(s)	1110
BspACI	CCGC	5 cut(s)	601, 1114, 1232, 1932, 2130
BspANI	GGCC	5 cut(s)	1198, 1773, 1863, 1895, 1908
BspCNI	CTCAG	7 cut(s)	136, 1102, 1503, 1560, 1679, 1819, 2114
BspLI	GGNNCC	5 cut(s)	562, 1413, 1783, 2090, 2128
BspMAI	CTGCAG	1 cut(s)	1471
BspMI	ACCTGC	1 cut(s)	562
BspOI	GCTAGC	2 cut(s)	837, 1932
BspPI	GGATC	7 cut(s)	211, 555, 568, 623, 1467, 1776, 1789
BspQI	GCTCTTC	1 cut(s)	1671
BspT104I	TTCGAA	2 cut(s)	179, 2242
BspTI	CTTAAG	1 cut(s)	1244
BspTNI	GGTCTC	1 cut(s)	337
BsrBI	CCGCTC	1 cut(s)	1114
BsrDI	GCAATG	3 cut(s)	165, 589, 1168
BsrGI	TGTACA	5 cut(s)	293, 1450, 1702, 2023, 2211
BsrI	ACTGG	4 cut(s)	274, 1252, 1978, 2094
BssECI	CCNNGG	1 cut(s)	1119
BssMI	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
BssNAI	GTATAC	1 cut(s)	954
BssNI	GRCGYC	1 cut(s)	9
BssSI	CACGAG	1 cut(s)	2249
BssT1I	CCWWGG	1 cut(s)	1119
Bst1107I	GTATAC	1 cut(s)	954
Bst2BI	CACGAG	1 cut(s)	2249
Bst4CI	ACNGT	4 cut(s)	278, 2011, 2021, 2028
Bst6I	CTCTTC	4 cut(s)	439, 870, 1671, 1795
BstACI	GRCGYC	1 cut(s)	9
BstAFI	CTTAAG	1 cut(s)	1244
BstAPI	GCANNNNNTGC	1 cut(s)	546
BstAUI	TGTACA	5 cut(s)	293, 1450, 1702, 2023, 2211
BstBI	TTCGAA	2 cut(s)	179, 2242
BstC8I	GCNNGC	8 cut(s)	188, 835, 839, 1159, 1897, 1910, 1930, 2270
BstDEI	CTNAG	8 cut(s)	123, 887, 1110, 1511, 1547, 1666, 1827, 2101
BstF5I	GGATG	6 cut(s)	30, 744, 755, 1025, 1180, 2032
BstH2I	RGCGCY	1 cut(s)	1252
BstHHI	GCGC	2 cut(s)	1251, 2181
BstKTI	GATC	8 cut(s)	206, 563, 631, 1462, 1568, 1607, 1665, 1784
BstMAI	GTCTC	5 cut(s)	260, 337, 378, 511, 2195
BstMBI	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
BstMWI	GCNNNNNNNGC	7 cut(s)	347, 546, 598, 1397, 1905, 2126, 2187
BstSFI	CTRYAG	2 cut(s)	261, 1467
BstSLI	GKGCMC	3 cut(s)	276, 542, 2290
BstV1I	GCAGC	4 cut(s)	729, 1057, 1409, 1453
BstV2I	GAAGAC	1 cut(s)	1040
BstX2I	RGATCY	4 cut(s)	560, 1459, 1604, 1781
BstYI	RGATCY	4 cut(s)	560, 1459, 1604, 1781
BstZ17I	GTATAC	1 cut(s)	954
Bsu36I	CCTNAGG	1 cut(s)	1827
BsuRI	GGCC	5 cut(s)	1198, 1773, 1863, 1895, 1908
BtrI	CACGTC	1 cut(s)	830
BtsCI	GGATG	6 cut(s)	30, 744, 755, 1025, 1180, 2032
BtsIMutI	CAGTG	7 cut(s)	283, 749, 1259, 1508, 1555, 2033, 2101
BveI	ACCTGC	1 cut(s)	562
Cac8I	GCNNGC	8 cut(s)	188, 835, 839, 1159, 1897, 1910, 1930, 2270
CfoI	GCGC	2 cut(s)	1251, 2181
Cfr13I	GGNCC	6 cut(s)	1116, 1196, 1598, 1772, 2088, 2135
Csp6I	GTAC	5 cut(s)	294, 1451, 1703, 2024, 2212
CviAII	CATG	6 cut(s)	524, 851, 929, 1211, 1682, 2164
CviQI	GTAC	5 cut(s)	294, 1451, 1703, 2024, 2212
DdeI	CTNAG	8 cut(s)	123, 887, 1110, 1511, 1547, 1666, 1827, 2101
DpnI	GATC	8 cut(s)	205, 562, 630, 1461, 1567, 1606, 1664, 1783
DpnII	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
DraI	TTTAAA	1 cut(s)	654
DraIII	CACNNNGTG	1 cut(s)	1550
DriI	GACNNNNNGTC	2 cut(s)	56, 759
EaeI	YGGCCR	2 cut(s)	1861, 1906
Eam1104I	CTCTTC	4 cut(s)	439, 870, 1671, 1795
Eam1105I	GACNNNNNGTC	2 cut(s)	56, 759
EarI	CTCTTC	4 cut(s)	439, 870, 1671, 1795
Ecl136II	GAGCTC	1 cut(s)	1328
Eco130I	CCWWGG	1 cut(s)	1119
Eco24I	GRGCYC	2 cut(s)	1330, 1695
Eco31I	GGTCTC	1 cut(s)	337
Eco32I	GATATC	2 cut(s)	667, 1687
Eco47I	GGWCC	4 cut(s)	1116, 1598, 2088, 2135
Eco53kI	GAGCTC	1 cut(s)	1328
Eco57I	CTGAAG	3 cut(s)	970, 1365, 2280
Eco81I	CCTNAGG	1 cut(s)	1827
Eco88I	CYCGRG	1 cut(s)	1524
EcoICRI	GAGCTC	1 cut(s)	1328
EcoRI	GAATTC	2 cut(s)	175, 1725
EcoRV	GATATC	2 cut(s)	667, 1687
EcoT14I	CCWWGG	1 cut(s)	1119
EcoT22I	ATGCAT	2 cut(s)	715, 813
EcoT38I	GRGCYC	2 cut(s)	1330, 1695
ErhI	CCWWGG	1 cut(s)	1119
FaeI	CATG	6 cut(s)	527, 854, 932, 1214, 1685, 2167
FalI	AAGNNNNNCTT	2 cut(s)	1446, 1478
FaqI	GGGAC	3 cut(s)	290, 1144, 2090
FatI	CATG	6 cut(s)	523, 850, 928, 1210, 1681, 2163
FauNDI	CATATG	1 cut(s)	1272
FblI	GTMKAC	3 cut(s)	60, 953, 1978
Fnu4HI	GCNGC	6 cut(s)	743, 1071, 1233, 1398, 1467, 2130
FokI	GGATG	6 cut(s)	17, 742, 751, 1012, 1187, 2019
FriOI	GRGCYC	2 cut(s)	1330, 1695
Fsp4HI	GCNGC	6 cut(s)	743, 1071, 1233, 1398, 1467, 2130
FspBI	CTAG	9 cut(s)	240, 678, 695, 834, 1074, 1640, 1749, 1929, 2058
GlaI	GCGC	2 cut(s)	1250, 2180
GluI	GCNGC	6 cut(s)	743, 1071, 1233, 1398, 1467, 2130
GsuI	CTGGAG	4 cut(s)	250, 357, 363, 981
HaeII	RGCGCY	1 cut(s)	1252
HaeIII	GGCC	5 cut(s)	1198, 1773, 1863, 1895, 1908
HapII	CCGG	1 cut(s)	2036
HhaI	GCGC	2 cut(s)	1251, 2181
Hin1I	GRCGYC	1 cut(s)	9
Hin1II	CATG	6 cut(s)	527, 854, 932, 1214, 1685, 2167
Hin6I	GCGC	2 cut(s)	1249, 2179
HinP1I	GCGC	2 cut(s)	1249, 2179
HincII	GTYRAC	2 cut(s)	61, 793
HindII	GTYRAC	2 cut(s)	61, 793
HindIII	AAGCTT	4 cut(s)	248, 1347, 1711, 2266
HinfI	GANTC	7 cut(s)	847, 1005, 1093, 1475, 1619, 1742, 2168
HpaI	GTTAAC	1 cut(s)	793
HpaII	CCGG	1 cut(s)	2036
HphI	GGTGA	4 cut(s)	947, 1541, 1682, 1928
Hpy166II	GTNNAC	8 cut(s)	61, 793, 827, 954, 1451, 1979, 2017, 2024
Hpy8I	GTNNAC	8 cut(s)	61, 793, 827, 954, 1451, 1979, 2017, 2024
Hpy99I	CGWCG	5 cut(s)	26, 62, 65, 106, 1663
HpyAV	CCTTC	3 cut(s)	108, 729, 2255
HpyCH4III	ACNGT	4 cut(s)	278, 2011, 2021, 2028
HpyCH4IV	ACGT	6 cut(s)	57, 63, 823, 829, 1065, 1658
HpyF10VI	GCNNNNNNNGC	7 cut(s)	347, 546, 598, 1397, 1905, 2126, 2187
HpyF3I	CTNAG	8 cut(s)	123, 887, 1110, 1511, 1547, 1666, 1827, 2101
HpySE526I	ACGT	6 cut(s)	57, 63, 823, 829, 1065, 1658
Hsp92I	GRCGYC	1 cut(s)	9
Hsp92II	CATG	6 cut(s)	527, 854, 932, 1214, 1685, 2167
HspAI	GCGC	2 cut(s)	1249, 2179
KspAI	GTTAAC	1 cut(s)	793
Kzo9I	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
LguI	GCTCTTC	1 cut(s)	1671
Lsp1109I	GCAGC	4 cut(s)	729, 1057, 1409, 1453
LweI	GCATC	9 cut(s)	64, 84, 154, 337, 700, 729, 820, 1024, 1034
MaeI	CTAG	9 cut(s)	240, 678, 695, 834, 1074, 1640, 1749, 1929, 2058
MaeII	ACGT	6 cut(s)	57, 63, 823, 829, 1065, 1658
MaeIII	GTNAC	2 cut(s)	618, 1550
MalI	GATC	8 cut(s)	205, 562, 630, 1461, 1567, 1606, 1664, 1783
MbiI	CCGCTC	1 cut(s)	1114
MboI	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
MboII	GAAGA	8 cut(s)	456, 515, 887, 1040, 1628, 1688, 1746, 1782
MflI	RGATCY	4 cut(s)	560, 1459, 1604, 1781
MhlI	GDGCHC	8 cut(s)	276, 542, 778, 906, 1330, 1510, 1695, 2290
MlsI	TGGCCA	2 cut(s)	1863, 1908
MluNI	TGGCCA	2 cut(s)	1863, 1908
MlyI	GAGTC	2 cut(s)	841, 1014
MmeI	TCCRAC	5 cut(s)	224, 451, 743, 1152, 1855
Mox20I	TGGCCA	2 cut(s)	1863, 1908
Mph1103I	ATGCAT	2 cut(s)	715, 813
MroXI	GAANNNNTTC	4 cut(s)	118, 879, 1536, 1741
MscI	TGGCCA	2 cut(s)	1863, 1908
MseI	TTAA	9 cut(s)	159, 194, 366, 380, 653, 792, 1245, 1715, 2186
MslI	CAYNNNNRTG	4 cut(s)	933, 1869, 2196, 2281
Msp20I	TGGCCA	2 cut(s)	1863, 1908
MspA1I	CMGCKG	2 cut(s)	422, 2132
MspCI	CTTAAG	1 cut(s)	1244
MspI	CCGG	1 cut(s)	2036
Mva1269I	GAATGC	2 cut(s)	256, 2250
MwoI	GCNNNNNNNGC	7 cut(s)	347, 546, 598, 1397, 1905, 2126, 2187
NdeI	CATATG	1 cut(s)	1272
NdeII	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
NheI	GCTAGC	2 cut(s)	833, 1928
NlaIII	CATG	6 cut(s)	527, 854, 932, 1214, 1685, 2167
NlaIV	GGNNCC	5 cut(s)	562, 1413, 1783, 2090, 2128
NmuCI	GTSAC	2 cut(s)	618, 1550
NsiI	ATGCAT	2 cut(s)	715, 813
NspV	TTCGAA	2 cut(s)	179, 2242
PaeR7I	CTCGAG	1 cut(s)	1524
PaqCI	CACCTGC	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1671
PcsI	WCGNNNNNNNCGW	1 cut(s)	1444
PctI	GAATGC	2 cut(s)	256, 2250
PdmI	GAANNNNTTC	4 cut(s)	118, 879, 1536, 1741
PfeI	GAWTC	5 cut(s)	1093, 1475, 1619, 1742, 2168
PflMI	CCANNNNNTGG	4 cut(s)	171, 557, 1408, 1502
PkrI	GCNGC	6 cut(s)	744, 1072, 1234, 1399, 1468, 2131
PleI	GAGTC	2 cut(s)	841, 1013
PpsI	GAGTC	2 cut(s)	841, 1013
PsiI	TTATAA	1 cut(s)	1293
Psp124BI	GAGCTC	1 cut(s)	1330
Psp1406I	AACGTT	1 cut(s)	1065
PspN4I	GGNNCC	5 cut(s)	562, 1413, 1783, 2090, 2128
PspPI	GGNCC	6 cut(s)	1116, 1196, 1598, 1772, 2088, 2135
PspXI	VCTCGAGB	1 cut(s)	1524
PstI	CTGCAG	1 cut(s)	1471
PsuI	RGATCY	4 cut(s)	560, 1459, 1604, 1781
PvuII	CAGCTG	1 cut(s)	422
RsaI	GTAC	5 cut(s)	295, 1452, 1704, 2025, 2213
RsaNI	GTAC	5 cut(s)	294, 1451, 1703, 2024, 2212
RseI	CAYNNNNRTG	4 cut(s)	933, 1869, 2196, 2281
SacI	GAGCTC	1 cut(s)	1330
SalI	GTCGAC	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	1671
SaqAI	TTAA	9 cut(s)	159, 194, 366, 380, 653, 792, 1245, 1715, 2186
SatI	GCNGC	6 cut(s)	743, 1071, 1233, 1398, 1467, 2130
Sau3AI	GATC	8 cut(s)	203, 560, 628, 1459, 1565, 1604, 1662, 1781
Sau96I	GGNCC	6 cut(s)	1116, 1196, 1598, 1772, 2088, 2135
SchI	GAGTC	2 cut(s)	841, 1014
SduI	GDGCHC	8 cut(s)	276, 542, 778, 906, 1330, 1510, 1695, 2290
SfaNI	GCATC	9 cut(s)	64, 84, 154, 337, 700, 729, 820, 1024, 1034
SfcI	CTRYAG	2 cut(s)	261, 1467
Sfr274I	CTCGAG	1 cut(s)	1524
SfuI	TTCGAA	2 cut(s)	179, 2242
SgrDI	CGTCGACG	1 cut(s)	59
SinI	GGWCC	4 cut(s)	1116, 1598, 2088, 2135
SlaI	CTCGAG	1 cut(s)	1524
SmiMI	CAYNNNNRTG	4 cut(s)	933, 1869, 2196, 2281
SmlI	CTYRAG	4 cut(s)	1244, 1425, 1524, 1720
SmoI	CTYRAG	4 cut(s)	1244, 1425, 1524, 1720
SpeI	ACTAGT	1 cut(s)	2057
SsiI	CCGC	5 cut(s)	601, 1114, 1232, 1932, 2130
SspI	AATATT	1 cut(s)	1699
SspMI	CTAG	9 cut(s)	240, 678, 695, 834, 1074, 1640, 1749, 1929, 2058
SstI	GAGCTC	1 cut(s)	1330
StyI	CCWWGG	1 cut(s)	1119
TaaI	ACNGT	4 cut(s)	278, 2011, 2021, 2028
TaiI	ACGT	6 cut(s)	60, 66, 826, 832, 1068, 1661
TaqI	TCGA	9 cut(s)	60, 179, 358, 1008, 1525, 1661, 1689, 1732, 2242
TatI	WGTACW	5 cut(s)	293, 1450, 1702, 2023, 2211
TauI	GCSGC	2 cut(s)	1235, 2132
TfiI	GAWTC	5 cut(s)	1093, 1475, 1619, 1742, 2168
Tru1I	TTAA	9 cut(s)	159, 194, 366, 380, 653, 792, 1245, 1715, 2186
Tru9I	TTAA	9 cut(s)	159, 194, 366, 380, 653, 792, 1245, 1715, 2186
TscAI	CASTG	7 cut(s)	283, 756, 1259, 1515, 1555, 2033, 2101
TseFI	GTSAC	2 cut(s)	618, 1550
TseI	GCWGC	4 cut(s)	742, 1070, 1397, 1466
Tsp45I	GTSAC	2 cut(s)	618, 1550
TspDTI	ATGAA	7 cut(s)	932, 1259, 1689, 1718, 1821, 1859, 2019
TspGWI	ACGGA	4 cut(s)	232, 784, 885, 1895
TspRI	CASTG	7 cut(s)	283, 756, 1259, 1515, 1555, 2033, 2101
Van91I	CCANNNNNTGG	4 cut(s)	171, 557, 1408, 1502
Vha464I	CTTAAG	1 cut(s)	1244
VpaK11BI	GGWCC	4 cut(s)	1116, 1598, 2088, 2135
XapI	RAATTY	8 cut(s)	175, 299, 643, 1385, 1420, 1725, 2082, 2226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1871
XhoI	CTCGAG	1 cut(s)	1524
XmiI	GTMKAC	3 cut(s)	60, 953, 1978
XmnI	GAANNNNTTC	4 cut(s)	118, 879, 1536, 1741
XspI	CTAG	9 cut(s)	240, 678, 695, 834, 1074, 1640, 1749, 1929, 2058
Zsp2I	ATGCAT	2 cut(s)	715, 813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.