Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009767

Physical Location & Seq

Genomic Coordinates Forward (+)

5560607 .. 5565660

Gene Structure 5054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G16910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3438 bp

ATGGCATCTAATAAGCATTTTGATAAAAGTCGATCAAATCTATCAAACAACTCTGATATTCAGGAGCCTGGAAGGCCACCTGCTGGTCACTCTGTCAAATTTGCTCAAAGAACTTCCTCGGGTCGCTATATCAATTACTCGAGGGACGATCTTGATAGCGAGTTGGGCGGTCAAGATTTCATGAGCTATACAGTTCACATTCCTCCCACTCCAGATAACCAGCCAATGGACCCTTCCATTTCTCAGAAAGTTGAGGAGCAATATGTCGCTAACTCCATGTTCACTGGCGGTTTCAAGAGCAACACCAGGGCTCACCTTATGCACAAAGTTATTGAGACAGAGCCTAACCATCCACAAATGGCTGGCTCTAAAGGATCGTCTTGCGCGATCCCTGGCTGTGATGCTAAGGTTATGAGCGATGAGAGAGGTCAAGACCTTCTTCCTTGTGAATGTGACTTTAAAATTTGTAGGGATTGCTTCATAGATGCTGTCAAAACCGGAGGTGGGATTTGCCCCGGGTGTAAAGAACCGTACAAGAACACGCATTTGACCGATCAGGTTGATGAAAACGGTCAGCAAAGGCCTATGCTGCCTGGGGGTGGCGGGTCAAAGATGGAGAGAAGATTGTCGATGGTGAAGTCAACTAATAAATCAGCTTTGATGAGGAGTCAGACTGGAGATTTTGATCACAACAGGTGGTTATTTGAGACGACTGGAACTTATGGTTATGGGAATGCTTTTTGGACAAAGGACGGGGATTTCGGGAGCGGTAAGGATGGAGATGGAGATGGTGACGGTATGGGTATGGAGGCCCAAGATTTGATGAGCAGACCGTGGAGACCGCTTACTCGGAAGCTGAAAATTCCTGCTGGTGTTATTAGTCCATACAGGCTTTTGATATTTATCCGTATAGTTGTTCTTGCATTGTTCTTGACTTGGAGGGTTAAACATCAAAACCCAGACGCTGTATGGTTATGGGGAATGTCTGTGGTTTGTGAGCTATGGTTTGCCTTGTCTTGGCTTCTTGATCAGCTCCCTAAGCTATGCCCGATTAATCGTGCCACCGATCTTCAAGTCTTGAAGGAAAAGTTTGAAACACCGACAGCCAGCAACCCGACCGGCAAATCCGACCTTCCTGGATTCGATGTCTTTGTCTCTACTGCGGATCCGGAGAAAGAACCTCCTCTGGTCACTGCTAATACCATTTTATCTATTCTTGCTGCGGAATATCCTGTTGAGAAGCTTTCTTGCTATGTATCTGATGATGGAGGGGCGCTTCTTACGTTTGAAGCAATGGCTGAAGCTGCTAGCTTTGCCAACATTTGGGTTCCTTTTTGTCGTAAACATGCGATCGAGCCGAGGAATCCTGATTCCTACTTTAGCTTAAAGAGAGATCCTTACAAGAACAAAGTGAAGTCTGATTTCGTGAAGGATCGTAGACGGGTTAAGCGTGAGTTTGATGAGTTTAAAGTCAGGGTTAACAGCTTGCCTGATTCTATCAGGCGACGTTCTGATGCTTATCATGCCAGAGAAGAAATCAAAGCCATGAAGATGCAGAGGCAGAACAGGGACGATGAGCCTATGGAGCCCGTGAAGATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGAACTTGGTTGACTTCTGCCAGTGATCATGCCAAGGGAGACCACGCGGGTATCATTCAGGTGATGTTGAAGCCACCTAGTGATGAACCACTACACGGAGTATCCGAAGGGTTTCTTGATCTAACCGACGTGGACATTCGACTCCCGCTCCTTGTGTATGTTTCTCGTGAGAAGCGACCTGGTTATGATCATAACAAGAAGGCTGGAGCCATGAACGCCTTAGTCAGAGCTTCTGCGATTATGTCAAATGGACCGTTCATACTCAATCTTGACTGTGATCATTACATATACAACTCTGAGGCTCTGAGAGAAGGCATGTGTTTCATGATGGATAGAGGCGGGGATCGTCTTTGCTACGTTCAGTTTCCGCAGCGGTTTGAAGGTATTGACCCATCTGATAGATATGCTAATCACAACACTGTCTTCTTTGACGTCAACATGAGAGCTCTTGATGGGCTTATGGGTCCGGTTTATGTCGGAACCGGTTGTCTCTTCCGAAGAATCGCGCTTTATGGATTCAATCCGCCTCGAAGCAAGGACTTTTCCCCAAGTTGCTGGAGTTGTTGTTTCCCTCGTAGCAAGAAGAAGAATATTCCTGAAGAAAACCGAGCTCTGCGTATGAGTGATTATGATGACGAAGAGATGAATCTCTCTCTAGTCCCGAAGAAGTTCGGTAACTCAACATTCCTCATTGATTCAATTCCCGTTGCTGAGTTCCAAGGCCGGCCTCTCGCGGACCACCCTGCGGTTAAAAACGGGCGTCCACCGGGTGCACTCACCATTCCTCGAGAACTTCTTGATGCATCGACTGTAGCAGAAGCCATTGCTGTTATCTCTTGCTGGTACGAGGATAAAACTGAGTGGGGATCACGTATCGGATGGATTTACGGTTCAGTCACTGAAGATGTTGTCACAGGTTATAGAATGCATAACCGAGGCTGGAAATCGGTTTACTGTGTGACGAAACGGGATGCTTTCCGTGGCACAGCTCCTATTAACTTGACGGATAGGCTTCACCAGGTTCTCCGTTGGGCTACTGGCTCGGTGGAGATCTTTTTCTCCCGTAACAACGCTCTTCTCGCAAGCTCGAAAATGAAAATACTCCAGAGAATTGCCTACTTAAACGTCGGTATCTACCCGTTCACATCGATCTTCCTCATCGTATACTGTTTCCTACCAGCGCTCTCCCTCTTCTCTGGTCAGTTCATCGTCCAGACGCTCAACGTCACTTTCCTAGTCTACCTTCTCATCATCTCCATCACTCTCTGCTTACTGGCCCTCCTCGAGATCAAATGGTCAGGAATCTCACTCGAGGAATGGTGGAGAAACGAACAGTTTTGGCTCATTGGAGGAACAAGTGCTCATCTCGCAGCTGTGCTTCAAGGTTTGCTCAAAGTTGTAGCAGGAGTCGAAATCTCCTTCACGCTCACGAGTAAATCCGGAGGAGATGATATAGACGACGAGTTTGCGGATTTGTACATGGTGAAATGGACTTCACTTATGATCCCTCCGATTACCATCATTATGGTGAATCTGATAGCGATTGCGGTTGGATTCAGCAGGACGATTTACAGTGTGGTTCCTCAGTGGAGTAAACTGATTGGAGGAGTGTTCTTCAGTTTTTGGGTTTTGGCACATCTTTATCCATTTGCTAAAGGTCTAATGGGAAGAAGAGGAAGAACACCAACGATTGTGTATGTTTGGTCTGGTCTTGTGGCCATTACCATTTCTCTTCTTTGGGTCGCCATTAATCCACCGGCTGGTAATACTGAGATCGGAGGAAACTTCAGTTTTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016021 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0021700 GO:0022622 GO:0030154 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051753 GO:0060560 GO:0070085 GO:0071554 GO:0071669 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097502 GO:0097708 GO:0098588 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

1145

Amino Acids

128.36

Weight (kDa)

7.5

Isoelectric Point (pI)

42.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_4	PF14570	130 - 179	4.9e-18	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	382 - 1135	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03050 AT5G16910
fragaria_vesca	FvH4_7g34010 FvH4_7g34010 FvH4_7g34010
malus_domestica	MD01G1236500.v1.1 MD07G1309200.v1.1
prunus_persica	Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384261
rosa_laevigata	RLG00000026053
rosa_multiflora	Rmu_sc0011271.1_g000003
rosa_rugosa	Rorug01G0446300
rosa_samantha	Rh1AG471800 Rh1BG429500 Rh1CG442100 Rh1DG462200
rosa_wichuraiana	Rw1G040080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	88
AatII	GACGTC	1 cut(s)	2073
Acc36I	ACCTGC	1 cut(s)	88
AccB7I	CCANNNNNTGG	4 cut(s)	83, 226, 1323, 3398
AccBSI	CCGCTC	2 cut(s)	768, 1786
AccI	GTMKAC	3 cut(s)	1438, 2802, 2877
AccII	CGCG	4 cut(s)	386, 1685, 2144, 2372
AccIII	TCCGGA	2 cut(s)	1168, 3077
AclWI	GGATC	9 cut(s)	382, 382, 1160, 1173, 1388, 1440, 1989, 2512, 3136
AcoI	YGGCCR	1 cut(s)	3354
AcsI	RAATTY	3 cut(s)	98, 462, 861
AcuI	CTGAAG	5 cut(s)	1320, 2256, 2559, 3238, 3409
AcyI	GRCGYC	2 cut(s)	2070, 2398
AdeI	CACNNNGTG	2 cut(s)	1718, 2408
AfaI	GTAC	4 cut(s)	533, 1627, 2483, 3116
AfeI	AGCGCT	1 cut(s)	2820
AfiI	CCNNNNNNNGG	9 cut(s)	83, 226, 504, 599, 1017, 1323, 1733, 2383, 3398
AgeI	ACCGGT	1 cut(s)	2120
AjiI	CACGTC	1 cut(s)	1768
AjnI	CCWGG	8 cut(s)	67, 305, 391, 592, 1135, 1636, 1816, 2655
AjuI	GAANNNNNNNTTGG	2 cut(s)	217, 249
AloI	GAACNNNNNNTCC	2 cut(s)	2512, 2544
Alw21I	GWGCWC	4 cut(s)	2086, 2251, 2413, 3001
Alw26I	GTCTC	6 cut(s)	329, 701, 832, 1159, 1671, 2132
Alw44I	GTGCAC	1 cut(s)	2409
AlwI	GGATC	9 cut(s)	382, 382, 1160, 1173, 1388, 1440, 1989, 2512, 3136
AlwNI	CAGNNNCTG	2 cut(s)	965, 2537
Ama87I	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
Aor13HI	TCCGGA	2 cut(s)	1168, 3077
Aor51HI	AGCGCT	1 cut(s)	2820
AoxI	GGCC	8 cut(s)	74, 581, 810, 1634, 2359, 2363, 2913, 3354
ApaLI	GTGCAC	1 cut(s)	2409
ApeKI	GCWGC	5 cut(s)	589, 1220, 1304, 2008, 3008
ApoI	RAATTY	3 cut(s)	98, 462, 861
ArsI	GACNNNNNNTTYG	4 cut(s)	743, 775, 3086, 3118
AseI	ATTAAT	2 cut(s)	1053, 3387
AsiGI	ACCGGT	1 cut(s)	2120
Asp700I	GAANNNNTTC	2 cut(s)	1749, 2306
AspLEI	GCGC	4 cut(s)	386, 1276, 2146, 2821
AspS9I	GGNCC	6 cut(s)	229, 811, 1889, 2102, 2374, 2914
AsuC2I	CCSGG	3 cut(s)	516, 517, 2406
AsuHPI	GGTGA	8 cut(s)	305, 646, 803, 1711, 2407, 2645, 3133, 3178
AsuNHI	GCTAGC	1 cut(s)	1307
AvaI	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
AvaII	GGWCC	4 cut(s)	229, 1889, 2102, 2374
BaeGI	GKGCMC	1 cut(s)	2413
BaeI	ACNNNNGTAYC	4 cut(s)	1672, 1705, 2752, 2785
BalI	TGGCCA	1 cut(s)	3356
BamHI	GGATCC	1 cut(s)	1165
BanII	GRGCYC	4 cut(s)	313, 1590, 2086, 2251
BauI	CACGAG	2 cut(s)	1803, 3067
BbsI	GAAGAC	1 cut(s)	2053
Bbv12I	GWGCWC	4 cut(s)	2086, 2251, 2413, 3001
BbvI	GCAGC	5 cut(s)	576, 1207, 1291, 2020, 3020
BcgI	CGANNNNNNTGC	2 cut(s)	3086, 3120
BciT130I	CCWGG	8 cut(s)	69, 307, 393, 594, 1137, 1638, 1818, 2657
BciVI	GTATCC	1 cut(s)	1750
BclI	TGATCA	5 cut(s)	685, 1027, 1663, 1825, 1915
BcnI	CCSGG	3 cut(s)	516, 517, 2406
BcoDI	GTCTC	6 cut(s)	329, 701, 832, 1159, 1671, 2132
BfaI	CTAG	4 cut(s)	1308, 1716, 2294, 2873
BfmI	CTRYAG	1 cut(s)	2448
BfoI	RGCGCY	2 cut(s)	1277, 2822
BfuAI	ACCTGC	1 cut(s)	88
BfuI	GTATCC	1 cut(s)	1750
BglI	GCCNNNNNGGC	1 cut(s)	73
BglII	AGATCT	1 cut(s)	2688
BisI	GCNGC	5 cut(s)	590, 1221, 1305, 2009, 3009
BlsI	GCNGC	5 cut(s)	591, 1222, 1306, 2010, 3010
Bme18I	GGWCC	4 cut(s)	229, 1889, 2102, 2374
BmeT110I	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
BmgBI	CACGTC	1 cut(s)	1768
BmgT120I	GGNCC	6 cut(s)	229, 811, 1889, 2102, 2374, 2914
BmiI	GGNNCC	9 cut(s)	66, 231, 1167, 1329, 1587, 1846, 2103, 2119, 3219
BmsI	GCATC	8 cut(s)	14, 391, 475, 1504, 1542, 2428, 2450, 2599
BmtI	GCTAGC	1 cut(s)	1311
BpiI	GAAGAC	1 cut(s)	2053
BpmI	CTGGAG	5 cut(s)	195, 696, 1863, 2215, 2726
Bpu10I	CCTNAGC	2 cut(s)	405, 1038
BpuMI	CCSGG	3 cut(s)	516, 517, 2406
Bsa29I	ATCGAT	1 cut(s)	2786
BsaAI	YACGTR	1 cut(s)	2510
BsaBI	GATNNNNATC	4 cut(s)	684, 902, 1518, 3155
BsaHI	GRCGYC	2 cut(s)	2070, 2398
BsaI	GGTCTC	2 cut(s)	832, 1671
BsaWI	WCCGGW	5 cut(s)	497, 1168, 2104, 2120, 3077
BsaXI	ACNNNNNCTCC	6 cut(s)	1770, 1800, 2188, 2218, 2901, 2931
Bsc4I	CCNNNNNNNGG	9 cut(s)	83, 226, 504, 599, 1017, 1323, 1733, 2383, 3398
Bse118I	RCCGGY	4 cut(s)	1118, 2120, 2361, 3394
Bse1I	ACTGG	7 cut(s)	289, 679, 718, 1637, 1659, 2680, 2916
Bse3DI	GCAATG	2 cut(s)	1299, 2460
Bse8I	GATNNNNATC	4 cut(s)	684, 902, 1518, 3155
BseAI	TCCGGA	2 cut(s)	1168, 3077
BseBI	CCWGG	8 cut(s)	69, 307, 393, 594, 1137, 1638, 1818, 2657
BseCI	ATCGAT	1 cut(s)	2786
BseGI	GGATG	5 cut(s)	349, 781, 1620, 2522, 2614
BseJI	GATNNNNATC	4 cut(s)	684, 902, 1518, 3155
BseLI	CCNNNNNNNGG	9 cut(s)	83, 226, 504, 599, 1017, 1323, 1733, 2383, 3398
BseMI	GCAATG	2 cut(s)	1299, 2460
BseMII	CTCAG	7 cut(s)	257, 1926, 1934, 2340, 2487, 3236, 3399
BseNI	ACTGG	7 cut(s)	289, 679, 718, 1637, 1659, 2680, 2916
BseRI	GAGGAG	6 cut(s)	269, 679, 1173, 2909, 3096, 3258
BseSI	GKGCMC	1 cut(s)	2413
BseXI	GCAGC	5 cut(s)	576, 1207, 1291, 2020, 3020
Bsh1236I	CGCG	4 cut(s)	386, 1685, 2144, 2372
Bsh1285I	CGRYCG	2 cut(s)	1119, 1353
BshFI	GGCC	8 cut(s)	76, 583, 812, 1636, 2361, 2365, 2915, 3356
BshTI	ACCGGT	1 cut(s)	2120
BshVI	ATCGAT	1 cut(s)	2786
BsiEI	CGRYCG	2 cut(s)	1119, 1353
BsiHKAI	GWGCWC	4 cut(s)	2086, 2251, 2413, 3001
BsiHKCI	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
BslFI	GGGAC	3 cut(s)	158, 1583, 2282
BslI	CCNNNNNNNGG	9 cut(s)	83, 226, 504, 599, 1017, 1323, 1733, 2383, 3398
BsmAI	GTCTC	6 cut(s)	329, 701, 832, 1159, 1671, 2132
BsmBI	CGTCTC	1 cut(s)	701
BsmFI	GGGAC	3 cut(s)	158, 1583, 2282
BsmI	GAATGC	2 cut(s)	739, 2568
BsnI	GGCC	8 cut(s)	76, 583, 812, 1636, 2361, 2365, 2915, 3356
Bso31I	GGTCTC	2 cut(s)	832, 1671
BsoBI	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
Bsp1286I	GDGCHC	6 cut(s)	313, 1590, 2086, 2251, 2413, 3001
Bsp13I	TCCGGA	2 cut(s)	1168, 3077
Bsp1407I	TGTACA	1 cut(s)	3114
BspANI	GGCC	8 cut(s)	76, 583, 812, 1636, 2361, 2365, 2915, 3356
BspCNI	CTCAG	7 cut(s)	256, 1927, 1935, 2341, 2488, 3235, 3400
BspDI	ATCGAT	1 cut(s)	2786
BspEI	TCCGGA	2 cut(s)	1168, 3077
BspFNI	CGCG	4 cut(s)	386, 1685, 2144, 2372
BspHI	TCATGA	2 cut(s)	180, 1962
BspLI	GGNNCC	9 cut(s)	66, 231, 1167, 1329, 1587, 1846, 2103, 2119, 3219
BspMI	ACCTGC	1 cut(s)	88
BspOI	GCTAGC	1 cut(s)	1311
BspPI	GGATC	9 cut(s)	382, 382, 1160, 1173, 1388, 1440, 1989, 2512, 3136
BspQI	GCTCTTC	1 cut(s)	2718
BspTNI	GGTCTC	2 cut(s)	832, 1671
BsrBI	CCGCTC	2 cut(s)	768, 1786
BsrDI	GCAATG	2 cut(s)	1299, 2460
BsrFI	RCCGGY	4 cut(s)	1118, 2120, 2361, 3394
BsrGI	TGTACA	1 cut(s)	3114
BsrI	ACTGG	7 cut(s)	289, 679, 718, 1637, 1659, 2680, 2916
BssAI	RCCGGY	4 cut(s)	1118, 2120, 2361, 3394
BssNAI	GTATAC	1 cut(s)	2803
BssNI	GRCGYC	2 cut(s)	2070, 2398
BssSI	CACGAG	2 cut(s)	1803, 3067
BssT1I	CCWWGG	2 cut(s)	1671, 2356
Bst1107I	GTATAC	1 cut(s)	2803
Bst2BI	CACGAG	2 cut(s)	1803, 3067
Bst2UI	CCWGG	8 cut(s)	69, 307, 393, 594, 1137, 1638, 1818, 2657
Bst6I	CTCTTC	6 cut(s)	2135, 2271, 2718, 2834, 3304, 3375
BstACI	GRCGYC	2 cut(s)	2070, 2398
BstAUI	TGTACA	1 cut(s)	3114
BstBAI	YACGTR	1 cut(s)	2510
BstC8I	GCNNGC	6 cut(s)	364, 1108, 1309, 1487, 2363, 2722
BstDSI	CCRYGG	2 cut(s)	833, 2617
BstF5I	GGATG	5 cut(s)	349, 781, 1620, 2522, 2614
BstFNI	CGCG	4 cut(s)	386, 1685, 2144, 2372
BstH2I	RGCGCY	2 cut(s)	1277, 2822
BstHHI	GCGC	4 cut(s)	386, 1276, 2146, 2821
BstMAI	GTCTC	6 cut(s)	329, 701, 832, 1159, 1671, 2132
BstMCI	CGRYCG	2 cut(s)	1119, 1353
BstNI	CCWGG	8 cut(s)	69, 307, 393, 594, 1137, 1638, 1818, 2657
BstNSI	RCATGY	2 cut(s)	1349, 1957
BstSFI	CTRYAG	1 cut(s)	2448
BstSLI	GKGCMC	1 cut(s)	2413
BstUI	CGCG	4 cut(s)	386, 1685, 2144, 2372
BstV1I	GCAGC	5 cut(s)	576, 1207, 1291, 2020, 3020
BstV2I	GAAGAC	1 cut(s)	2053
BstX2I	RGATCY	3 cut(s)	1165, 1393, 2688
BstXI	CCANNNNNNTGG	2 cut(s)	2193, 3163
BstYI	RGATCY	3 cut(s)	1165, 1393, 2688
BstZ17I	GTATAC	1 cut(s)	2803
Bsu15I	ATCGAT	1 cut(s)	2786
BsuI	GTATCC	1 cut(s)	1750
BsuRI	GGCC	8 cut(s)	76, 583, 812, 1636, 2361, 2365, 2915, 3356
BsuTUI	ATCGAT	1 cut(s)	2786
BtgI	CCRYGG	2 cut(s)	833, 2617
BtgZI	GCGATG	1 cut(s)	432
BtrI	CACGTC	1 cut(s)	1768
BtsCI	GGATG	5 cut(s)	349, 781, 1620, 2522, 2614
BtsI	GCAGTG	1 cut(s)	1191
BtsIMutI	CAGTG	8 cut(s)	282, 1191, 1630, 1666, 2055, 2535, 3217, 3230
BveI	ACCTGC	1 cut(s)	88
Cac8I	GCNNGC	6 cut(s)	364, 1108, 1309, 1487, 2363, 2722
CaiI	CAGNNNCTG	2 cut(s)	965, 2537
CciI	TCATGA	2 cut(s)	180, 1962
CfoI	GCGC	4 cut(s)	386, 1276, 2146, 2821
Cfr10I	RCCGGY	4 cut(s)	1118, 2120, 2361, 3394
Cfr13I	GGNCC	6 cut(s)	229, 811, 1889, 2102, 2374, 2914
Cfr9I	CCCGGG	1 cut(s)	515
ClaI	ATCGAT	1 cut(s)	2786
CseI	GACGC	3 cut(s)	971, 2387, 2863
CsiI	ACCWGGT	2 cut(s)	1816, 2655
Csp6I	GTAC	4 cut(s)	532, 1626, 2482, 3115
CspAI	ACCGGT	1 cut(s)	2120
CviQI	GTAC	4 cut(s)	532, 1626, 2482, 3115
DraI	TTTAAA	2 cut(s)	460, 1468
DraIII	CACNNNGTG	2 cut(s)	1718, 2408
EaeI	YGGCCR	1 cut(s)	3354
Eam1104I	CTCTTC	6 cut(s)	2135, 2271, 2718, 2834, 3304, 3375
EarI	CTCTTC	6 cut(s)	2135, 2271, 2718, 2834, 3304, 3375
EciI	GGCGGA	1 cut(s)	2151
Ecl136II	GAGCTC	2 cut(s)	2084, 2249
Eco130I	CCWWGG	2 cut(s)	1671, 2356
Eco147I	AGGCCT	1 cut(s)	583
Eco24I	GRGCYC	4 cut(s)	313, 1590, 2086, 2251
Eco31I	GGTCTC	2 cut(s)	832, 1671
Eco47I	GGWCC	4 cut(s)	229, 1889, 2102, 2374
Eco47III	AGCGCT	1 cut(s)	2820
Eco53kI	GAGCTC	2 cut(s)	2084, 2249
Eco57I	CTGAAG	5 cut(s)	1320, 2256, 2559, 3238, 3409
Eco88I	CYCGRG	6 cut(s)	118, 139, 515, 2424, 2921, 2948
EcoICRI	GAGCTC	2 cut(s)	2084, 2249
EcoRII	CCWGG	8 cut(s)	67, 305, 391, 592, 1135, 1636, 1816, 2655
EcoT14I	CCWWGG	2 cut(s)	1671, 2356
EcoT22I	ATGCAT	2 cut(s)	2443, 2568
EcoT38I	GRGCYC	4 cut(s)	313, 1590, 2086, 2251
ErhI	CCWWGG	2 cut(s)	1671, 2356
Esp3I	CGTCTC	1 cut(s)	701
FalI	AAGNNNNNCTT	4 cut(s)	423, 455, 1737, 1769
FaqI	GGGAC	3 cut(s)	158, 1583, 2282
FauI	CCCGC	4 cut(s)	596, 1678, 1791, 1970
FbaI	TGATCA	5 cut(s)	685, 1027, 1663, 1825, 1915
FblI	GTMKAC	3 cut(s)	1438, 2802, 2877
Fnu4HI	GCNGC	5 cut(s)	590, 1221, 1305, 2009, 3009
FokI	GGATG	5 cut(s)	336, 788, 1627, 2529, 2621
FriOI	GRGCYC	4 cut(s)	313, 1590, 2086, 2251
FseI	GGCCGGCC	1 cut(s)	2365
Fsp4HI	GCNGC	5 cut(s)	590, 1221, 1305, 2009, 3009
FspBI	CTAG	4 cut(s)	1308, 1716, 2294, 2873
GlaI	GCGC	4 cut(s)	385, 1275, 2145, 2820
GluI	GCNGC	5 cut(s)	590, 1221, 1305, 2009, 3009
GsuI	CTGGAG	5 cut(s)	195, 696, 1863, 2215, 2726
HaeII	RGCGCY	2 cut(s)	1277, 2822
HaeIII	GGCC	8 cut(s)	76, 583, 812, 1636, 2361, 2365, 2915, 3356
HgaI	GACGC	3 cut(s)	971, 2387, 2863
HhaI	GCGC	4 cut(s)	386, 1276, 2146, 2821
Hin1I	GRCGYC	2 cut(s)	2070, 2398
Hin6I	GCGC	4 cut(s)	384, 1274, 2144, 2819
HinP1I	GCGC	4 cut(s)	384, 1274, 2144, 2819
HincII	GTYRAC	4 cut(s)	642, 1480, 1650, 2074
HindII	GTYRAC	4 cut(s)	642, 1480, 1650, 2074
HindIII	AAGCTT	1 cut(s)	1241
HpaI	GTTAAC	1 cut(s)	1480
HphI	GGTGA	8 cut(s)	305, 646, 803, 1711, 2407, 2645, 3133, 3178
Hpy99I	CGWCG	4 cut(s)	1509, 1769, 2768, 3101
HpyCH4IV	ACGT	8 cut(s)	1283, 1507, 1767, 1995, 2070, 2509, 2763, 2862
HpyCH4V	TGCA	6 cut(s)	322, 923, 1555, 2411, 2441, 2566
HpySE526I	ACGT	8 cut(s)	1283, 1507, 1767, 1995, 2070, 2509, 2763, 2862
Hsp92I	GRCGYC	2 cut(s)	2070, 2398
HspAI	GCGC	4 cut(s)	384, 1274, 2144, 2819
Kpn2I	TCCGGA	2 cut(s)	1168, 3077
KroI	GCCGGC	1 cut(s)	2361
KroNI	GCCGGC	1 cut(s)	2363
Ksp22I	TGATCA	5 cut(s)	685, 1027, 1663, 1825, 1915
KspAI	GTTAAC	1 cut(s)	1480
LguI	GCTCTTC	1 cut(s)	2718
LmnI	GCTCC	8 cut(s)	64, 256, 765, 1038, 1585, 1791, 1844, 2632
Lsp1109I	GCAGC	5 cut(s)	576, 1207, 1291, 2020, 3020
LweI	GCATC	8 cut(s)	14, 391, 475, 1504, 1542, 2428, 2450, 2599
MabI	ACCWGGT	2 cut(s)	1816, 2655
MaeI	CTAG	4 cut(s)	1308, 1716, 2294, 2873
MaeII	ACGT	8 cut(s)	1283, 1507, 1767, 1995, 2070, 2509, 2763, 2862
MbiI	CCGCTC	2 cut(s)	768, 1786
MflI	RGATCY	3 cut(s)	1165, 1393, 2688
MhlI	GDGCHC	6 cut(s)	313, 1590, 2086, 2251, 2413, 3001
MlsI	TGGCCA	1 cut(s)	3356
MluCI	AATT	6 cut(s)	98, 133, 462, 861, 2337, 2748
MluNI	TGGCCA	1 cut(s)	3356
MlyI	GAGTC	3 cut(s)	676, 1773, 3054
MmeI	TCCRAC	3 cut(s)	1152, 2095, 3169
Mox20I	TGGCCA	1 cut(s)	3356
Mph1103I	ATGCAT	2 cut(s)	2443, 2568
MroI	TCCGGA	2 cut(s)	1168, 3077
MroNI	GCCGGC	1 cut(s)	2361
MroXI	GAANNNNTTC	2 cut(s)	1749, 2306
MscI	TGGCCA	1 cut(s)	3356
MslI	CAYNNNNRTG	4 cut(s)	1550, 1697, 3161, 3164
Msp20I	TGGCCA	1 cut(s)	3356
MspA1I	CMGCKG	2 cut(s)	2011, 3011
Mva1269I	GAATGC	2 cut(s)	739, 2568
MvaI	CCWGG	8 cut(s)	69, 307, 393, 594, 1137, 1638, 1818, 2657
MvnI	CGCG	4 cut(s)	386, 1685, 2144, 2372
NaeI	GCCGGC	1 cut(s)	2363
NciI	CCSGG	3 cut(s)	516, 517, 2406
NgoMIV	GCCGGC	1 cut(s)	2361
NheI	GCTAGC	1 cut(s)	1307
NlaIV	GGNNCC	9 cut(s)	66, 231, 1167, 1329, 1587, 1846, 2103, 2119, 3219
NmeAIII	GCCGAG	1 cut(s)	1383
NmuCI	GTSAC	8 cut(s)	86, 452, 791, 1189, 2533, 2548, 2596, 2863
NsiI	ATGCAT	2 cut(s)	2443, 2568
NspI	RCATGY	2 cut(s)	1349, 1957
PaeR7I	CTCGAG	4 cut(s)	139, 2424, 2921, 2948
PagI	TCATGA	2 cut(s)	180, 1962
PaqCI	CACCTGC	1 cut(s)	88
PceI	AGGCCT	1 cut(s)	583
PciSI	GCTCTTC	1 cut(s)	2718
PcsI	WCGNNNNNNNCGW	4 cut(s)	383, 1447, 1740, 1810
PctI	GAATGC	2 cut(s)	739, 2568
PdiI	GCCGGC	1 cut(s)	2363
PdmI	GAANNNNTTC	2 cut(s)	1749, 2306
PflMI	CCANNNNNTGG	4 cut(s)	83, 226, 1323, 3398
PfoI	TCCNGGA	1 cut(s)	1135
PinAI	ACCGGT	1 cut(s)	2120
PkrI	GCNGC	5 cut(s)	591, 1222, 1306, 2010, 3010
Ple19I	CGATCG	1 cut(s)	1353
PleI	GAGTC	3 cut(s)	675, 1773, 3053
PpsI	GAGTC	3 cut(s)	675, 1773, 3053
Ppu21I	YACGTR	1 cut(s)	2510
PshBI	ATTAAT	2 cut(s)	1053, 3387
Psp124BI	GAGCTC	2 cut(s)	2086, 2251
Psp6I	CCWGG	8 cut(s)	67, 305, 391, 592, 1135, 1636, 1816, 2655
PspGI	CCWGG	8 cut(s)	67, 305, 391, 592, 1135, 1636, 1816, 2655
PspN4I	GGNNCC	9 cut(s)	66, 231, 1167, 1329, 1587, 1846, 2103, 2119, 3219
PspPI	GGNCC	6 cut(s)	229, 811, 1889, 2102, 2374, 2914
PspXI	VCTCGAGB	2 cut(s)	139, 2948
PstNI	CAGNNNCTG	2 cut(s)	965, 2537
PsuI	RGATCY	3 cut(s)	1165, 1393, 2688
PvuI	CGATCG	1 cut(s)	1353
PvuII	CAGCTG	1 cut(s)	3011
RigI	GGCCGGCC	1 cut(s)	2365
RsaI	GTAC	4 cut(s)	533, 1627, 2483, 3116
RsaNI	GTAC	4 cut(s)	532, 1626, 2482, 3115
RseI	CAYNNNNRTG	4 cut(s)	1550, 1697, 3161, 3164
SacI	GAGCTC	2 cut(s)	2086, 2251
SapI	GCTCTTC	1 cut(s)	2718
SatI	GCNGC	5 cut(s)	590, 1221, 1305, 2009, 3009
Sau96I	GGNCC	6 cut(s)	229, 811, 1889, 2102, 2374, 2914
SchI	GAGTC	3 cut(s)	676, 1773, 3054
SduI	GDGCHC	6 cut(s)	313, 1590, 2086, 2251, 2413, 3001
SexAI	ACCWGGT	2 cut(s)	1816, 2655
SfaNI	GCATC	8 cut(s)	14, 391, 475, 1504, 1542, 2428, 2450, 2599
SfcI	CTRYAG	1 cut(s)	2448
Sfr274I	CTCGAG	4 cut(s)	139, 2424, 2921, 2948
SinI	GGWCC	4 cut(s)	229, 1889, 2102, 2374
SlaI	CTCGAG	4 cut(s)	139, 2424, 2921, 2948
SmaI	CCCGGG	1 cut(s)	517
SmiMI	CAYNNNNRTG	4 cut(s)	1550, 1697, 3161, 3164
SmlI	CTYRAG	4 cut(s)	139, 2424, 2921, 2948
SmoI	CTYRAG	4 cut(s)	139, 2424, 2921, 2948
Sse9I	AATT	6 cut(s)	98, 133, 462, 861, 2337, 2748
SseBI	AGGCCT	1 cut(s)	583
SspI	AATATT	1 cut(s)	2230
SspMI	CTAG	4 cut(s)	1308, 1716, 2294, 2873
SstI	GAGCTC	2 cut(s)	2086, 2251
StuI	AGGCCT	1 cut(s)	583
StyI	CCWWGG	2 cut(s)	1671, 2356
TaiI	ACGT	8 cut(s)	1286, 1510, 1770, 1998, 2073, 2512, 2766, 2865
TaqII	GACCGA	1 cut(s)	566
TasI	AATT	6 cut(s)	98, 133, 462, 861, 2337, 2748
TatI	WGTACW	1 cut(s)	3114
TscAI	CASTG	8 cut(s)	289, 1198, 1637, 1666, 2062, 2542, 3217, 3230
TseFI	GTSAC	8 cut(s)	86, 452, 791, 1189, 2533, 2548, 2596, 2863
TseI	GCWGC	5 cut(s)	589, 1220, 1304, 2008, 3008
Tsp45I	GTSAC	8 cut(s)	86, 452, 791, 1189, 2533, 2548, 2596, 2863
TspGWI	ACGGA	5 cut(s)	896, 1749, 2606, 2654, 2657
TspMI	CCCGGG	1 cut(s)	515
TspRI	CASTG	8 cut(s)	289, 1198, 1637, 1666, 2062, 2542, 3217, 3230
Van91I	CCANNNNNTGG	4 cut(s)	83, 226, 1323, 3398
VneI	GTGCAC	1 cut(s)	2409
VpaK11BI	GGWCC	4 cut(s)	229, 1889, 2102, 2374
VspI	ATTAAT	2 cut(s)	1053, 3387
XapI	RAATTY	3 cut(s)	98, 462, 861
XceI	RCATGY	2 cut(s)	1349, 1957
XcmI	CCANNNNNNNNNTGG	1 cut(s)	966
XhoI	CTCGAG	4 cut(s)	139, 2424, 2921, 2948
XmaI	CCCGGG	1 cut(s)	515
XmiI	GTMKAC	3 cut(s)	1438, 2802, 2877
XmnI	GAANNNNTTC	2 cut(s)	1749, 2306
XspI	CTAG	4 cut(s)	1308, 1716, 2294, 2873
ZraI	GACGTC	1 cut(s)	2071
Zsp2I	ATGCAT	2 cut(s)	2443, 2568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.