Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011271.1

Orthogroup ID

OG0009767

Physical Location & Seq

Genomic Coordinates Reverse (-)

9179 .. 18347

Gene Structure 9169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011271.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4677 bp

atgggtggaaagcaaatgacaagatccaaatccccacttctagtattgaccctggttctcgcggccctctccctcctcttcttcttcctcttctctttccccagcgacggccccaccccgttctccgatggcccactccacccgaacccgatttacaaacccgaaacctccttcgtcgcctccctcgagcgcttcctcctcgcttttcacaactcccctccttccgccccccagaggactcacgatcctaaacacctcgacgatttgctcttcaacaccgacactcagcgactctacgcagatccctactacccactcaccatgcctcttagggtttacgtctacgacatgccccccaagttcacctacgatctcctccgcctcttcagcacctcctacaaggacacctccaatctcacctccaatggaagccccgtccaccgcctcatcgaacagcattcgattgattactggctgtgggcggatttgatagctccggagtcagagaggctgctgaagagcgtagtgagagtgcatcggcaggaggaggcagacctcttctacgttcccttcttcaccaccattagcttcttcttgatggagaagcagcaatgcaaatcgctttacagggaagctctcaagtggatcacggatcagcctgcctggaaccgatccggaggaagggatcatattattccagttcatcatccttggtcgtttaagtctgttcgccgatctgtgaaaaatgcaatttggctgcttcctgatatggactctacaggcaactggtctatcttttgcttaaacccagctggtgatactccatcatccgctagattatttgatgccattgttagtggttgcataccggtcatagttagtgatgagttggagcttccttttgaaggaatactagattatagaaagattgctttatttgtttcttccagtgatgctgtacaaccaggttggcttttaacatatcttagaaatattagccctgctcaaattgaagaaatgcgccagaatcttgctaagtactcaaggcatttcatatattccagtcctgctcaacccttgggtccggaagacttggtttggagaatgatggctggtaagttggtgaatatcaagcttcacactcgacgatctcaacgtgtgacaaaaccaaaggcactgagggaaattcaattctccgctgctatggcttccaaatcgttcaaggggaggctatcaaatctatcatcgagctctgacattcccgatggactcggcaagcctccaatgcctcccaccgtcacatttggccgcagaacctcctccggtcgctacatcagctactccagggatgatctcgatagcgaaattgggagtggtgactttatgaactacacagtgcacatacctcccaccccagacaaccaacccatggatccatccatttcgcagaaggttgaggagcagtatgtgtccaactcgcttttcacagggggattcaacagtgttacccgagctcatcttatggacaaggtgattgaatccgaaaccagccatcctcagatggccggtgctaaagggtcatcatgtgcaattcccgggtgtgatgcaaaggtcatgagcgatcaacggggggaggacattcttccttgtgagtgtgatttcaagatatgtcgagattgctatactgatgctgtcaaaactgggggtggtgtatgtcccggatgcaaggaacagtacaagaacacagatttggatgaaatggctatggagggtgcattgccaccgcttccgctgcctttgcctaatgggatgtctaaaatggatagtgggatgtctagaatggagaggaggttgtcactcatgaagtcaacaaagtcgggtctgatgaggagtcaaactggtgattttgatcacaaccggtggctgtttgaaacaaaaggaacttatggctatgggaatgctatatggcccaaggaaggaggttttggaaatggcaaagacgatgatgttgttgagccaactgagctgatgaacaaaccatggaggcctctcacacggaaattaaagatacctgcagctattctaagcccctataggcttctaatatttgtccgcatggttgtccttgggctgtttttggcatggaggatcagcaatccaaatactgatgcaatgtggctttggggaatgtcaatagtttgtgaggtctggtttgctttttcgtggcttctcgatcaacttcccaagttgtgcccaatcaatcgttctacagatcttaatgtcttgaaggagaaatttgaaacacctactctcaacaaccccaccgggaaatctgatcttccaggcatagatatctttgtgtccactgcagatccagataaagaaccaccacttgttacagcaaacactatcttatctattctagctactgattaccctgttgaaaagcttgcttgctatgtttctgatgatggaggtgcacttttaacctttgaggccatggcagaagcagcaagttttgctaatatatgggttcccttctgccgtaaacatggtattgagcccaggaatcctgaatcttacttcagtttgaagagggatccatacaagaacaaagtgaaatctgactttgtgaaggatcgtagaagggtgaaacgtgaatatgacgagttcaaggttcggattaatggactgcctgagtctatacgtcgccgatcagatgcttatcatgccagggaggaaatcaaggccatgaagcttcaaagacagaacagagaggatgagcctgtggagactgtgaagattcccaaagcaacttggatggctgatggaacccactggcctgggacttggttgacctcttcatccgagcattctaggagtgaccatgctggtattatacaggtgatgttaaaaccccctagtgaggaaccactgcatggaactgatggaactatagatgaagctagactcatcgacctcactgatattgatatccgccttcccatgcttgtttatgtgtctcgtgaaaagcggccaggctatgatcacaacaagaaggcaggggccatgaatgctcttgttcgagcctctgctataatgtccaatggcccattcattctcaacctcgactgtgatcattatatctacaattctcaggcaatgagggaaggtatgtgcttcatgatggatcgcggaggtgaccggctctgttatgttcagttcccacagagatttgagggtattgacccttcggatcgatatgccaaccacaacacagttttctttgatgtcaatatgcgggcccttgatggtctccagggcccagtttatgtcggaactggatgtctatttcgaagaattgccctgtatggttttgacccacctcgatcaaaagaacatcaccaaggttgttgcagttgctgcttttctagttctaaaaagaataagcatgcctcagtagcacacacccctgaagaaaaccgagccttgagaatgggtgattctgatgaagaagagatgaatctctccctgctgccgaagaggtttgggaactcaactttcctcatcgactcaattccagtggcagagtaccaaggtcgccctcttgcagatcacccagctgtaaagaatggacgcccacccggtgctctcaccattcctcgtgagctgcttgatgcatcaactgttgcagaggctatcagtgtcatttcctgctggtatgaagacaagactgagtggggagatcgtgtcggatggatttacggttcagttactgaagatgtggtcactggttacagaatgcacaacagaggatggaaatcagtttactgtgtgaccaaacgtgatgcatttcgtggaactgcacctatcaatctcactgataggttgcatcaggtcctccgttgggctacaggctcagtggaaatctttttctcccgcaacaatgccctgctagccagcccgagaatgaagattctgcaaagagtagcatatctcaacgttggtatctacccgttcacatccatcttccttattgtctactgcttcctccctgcactttcgctcttctctggtcagttcattgtgcagtccctcaatgttactttcctgacctatcttttggtcattactctcaccttatgtatgcttgccatacttgagatcaaatggtctggcattgaactagaagagtggtggagaaatgagcagttttggttgattggagggaccagtgctcaccttgctgctgtgattcaggggctattaaaagttattgcagggattgaaatctctttcaccttgacttcaaaatcaggaggtgacgatgaggatgatgactttgctgatctctacattgtgaaatggacatctctgatgatacccccaataacaatcatgatggtcaacttaattgcaatagcagttgggttcagcaggacaatatacagcgtgattccgcagtggagccgattgattggaggtgttttcttcagtttctgggttttagcacatctataccctttcgccaaaggattgatggggagacgagggaggacacccaccattgtttttgtatggtcaggactcattgcaatcaccatctctcttctttgggtggcaatcaatccccctgctggtacaaaccaaattggaggatcattcgaattcccctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016021 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0021700 GO:0022622 GO:0030154 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051753 GO:0060560 GO:0070085 GO:0071554 GO:0071669 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097502 GO:0097708 GO:0098588 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

1558

Amino Acids

175.67

Weight (kDa)

7.19

Isoelectric Point (pI)

45.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03050 AT5G16910
fragaria_vesca	FvH4_7g34010 FvH4_7g34010 FvH4_7g34010
malus_domestica	MD01G1236500.v1.1 MD07G1309200.v1.1
prunus_persica	Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384261
rosa_laevigata	RLG00000026053
rosa_multiflora	Rmu_sc0011271.1_g000003
rosa_rugosa	Rorug01G0446300
rosa_samantha	Rh1AG471800 Rh1BG429500 Rh1CG442100 Rh1DG462200
rosa_wichuraiana	Rw1G040080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2080
AccB7I	CCANNNNNTGG	2 cut(s)	1429, 2939
AccI	GTMKAC	2 cut(s)	342, 4041
AccII	CGCG	2 cut(s)	62, 3195
AccIII	TCCGGA	3 cut(s)	496, 674, 1084
AclI	AACGTT	1 cut(s)	4002
AcoI	YGGCCR	3 cut(s)	1306, 1563, 3035
AcsI	RAATTY	3 cut(s)	1185, 2294, 4667
AcuI	CTGAAG	6 cut(s)	370, 536, 2569, 3495, 3798, 4477
AcyI	GRCGYC	1 cut(s)	3637
AdeI	CACNNNGTG	1 cut(s)	3647
AfaI	GTAC	5 cut(s)	960, 1040, 1736, 3593, 4642
AfeI	AGCGCT	1 cut(s)	191
AflIII	ACRYGT	1 cut(s)	1156
AgeI	ACCGGT	2 cut(s)	868, 1917
AloI	GAACNNNNNNTCC	2 cut(s)	3751, 3783
Alw21I	GWGCWC	6 cut(s)	1253, 1401, 1516, 2482, 3652, 4240
Alw26I	GTCTC	4 cut(s)	2786, 3027, 3320, 4540
Alw44I	GTGCAC	2 cut(s)	1397, 2478
AlwNI	CAGNNNCTG	3 cut(s)	3423, 3776, 4500
Ama87I	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
Aor13HI	TCCGGA	3 cut(s)	496, 674, 1084
Aor51HI	AGCGCT	1 cut(s)	191
ApaI	GGGCCC	2 cut(s)	3307, 3326
ApaLI	GTGCAC	2 cut(s)	1397, 2478
ApoI	RAATTY	3 cut(s)	1185, 2294, 4667
ArsI	GACNNNNNNTTYG	2 cut(s)	4105, 4137
AseI	ATTAAT	1 cut(s)	2685
AsiGI	ACCGGT	2 cut(s)	868, 1917
AspLEI	GCGC	2 cut(s)	192, 1023
AsuC2I	CCSGG	5 cut(s)	1596, 1597, 1719, 2326, 3645
AsuII	TTCGAA	2 cut(s)	3355, 4665
AsuNHI	GCTAGC	1 cut(s)	3955
AvaI	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
AvaII	GGWCC	3 cut(s)	1082, 3898, 4230
BaeGI	GKGCMC	5 cut(s)	1401, 2255, 2482, 3307, 3326
BaeI	ACNNNNGTAYC	2 cut(s)	3991, 4024
BamHI	GGATCC	2 cut(s)	1432, 2599
BanII	GRGCYC	5 cut(s)	1253, 1516, 2565, 3307, 3326
BarI	GAAGNNNNNNTAC	2 cut(s)	3235, 3267
BauI	CACGAG	2 cut(s)	3024, 3663
BbsI	GAAGAC	2 cut(s)	1095, 3732
Bbv12I	GWGCWC	6 cut(s)	1253, 1401, 1516, 2482, 3652, 4240
BceAI	ACGGC	2 cut(s)	124, 2529
BclI	TGATCA	3 cut(s)	1909, 3046, 3136
BcnI	CCSGG	5 cut(s)	1596, 1597, 1719, 2326, 3645
BcoDI	GTCTC	4 cut(s)	2786, 3027, 3320, 4540
BfmI	CTRYAG	7 cut(s)	777, 2073, 2092, 2268, 2367, 2955, 3912
BfoI	RGCGCY	1 cut(s)	193
BfuAI	ACCTGC	1 cut(s)	2080
BglII	AGATCT	1 cut(s)	2272
BmcAI	AGTACT	1 cut(s)	1040
Bme18I	GGWCC	3 cut(s)	1082, 3898, 4230
BmeT110I	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
BmrI	ACTGGG	2 cut(s)	1710, 3320
BmtI	GCTAGC	1 cut(s)	3959
BmuI	ACTGGG	2 cut(s)	1710, 3320
BpiI	GAAGAC	2 cut(s)	1095, 3732
BpmI	CTGGAG	2 cut(s)	1327, 3302
Bpu14I	TTCGAA	2 cut(s)	3355, 4665
BpuEI	CTTGAG	4 cut(s)	623, 1027, 3511, 4181
BpuMI	CCSGG	5 cut(s)	1596, 1597, 1719, 2326, 3645
Bsa29I	ATCGAT	1 cut(s)	3259
BsaBI	GATNNNNATC	5 cut(s)	28, 1908, 2724, 3820, 4289
BsaHI	GRCGYC	1 cut(s)	3637
BsaI	GGTCTC	1 cut(s)	3320
BsaWI	WCCGGW	6 cut(s)	496, 674, 868, 1084, 1322, 1917
BsaXI	ACNNNNNCTCC	4 cut(s)	1835, 1865, 3735, 3765
Bse118I	RCCGGY	4 cut(s)	868, 1565, 1917, 3204
Bse3DI	GCAATG	5 cut(s)	617, 1775, 2178, 3168, 4590
Bse8I	GATNNNNATC	5 cut(s)	28, 1908, 2724, 3820, 4289
BseAI	TCCGGA	3 cut(s)	496, 674, 1084
BseCI	ATCGAT	1 cut(s)	3259
BseJI	GATNNNNATC	5 cut(s)	28, 1908, 2724, 3820, 4289
BseMI	GCAATG	5 cut(s)	617, 1775, 2178, 3168, 4590
BseMII	CTCAG	9 cut(s)	299, 1169, 1571, 2013, 2688, 3170, 3471, 3726, 3933
BseRI	GAGGAG	8 cut(s)	65, 188, 365, 560, 1309, 1472, 1861, 1903
BseSI	GKGCMC	5 cut(s)	1401, 2255, 2482, 3307, 3326
BseYI	CCCAGC	3 cut(s)	101, 808, 3619
BsgI	GTGCAG	3 cut(s)	3849, 4041, 4109
Bsh1236I	CGCG	2 cut(s)	62, 3195
Bsh1285I	CGRYCG	1 cut(s)	1327
BshTI	ACCGGT	2 cut(s)	868, 1917
BshVI	ATCGAT	1 cut(s)	3259
BsiEI	CGRYCG	1 cut(s)	1327
BsiHKAI	GWGCWC	6 cut(s)	1253, 1401, 1516, 2482, 3652, 4240
BsiHKCI	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
BslFI	GGGAC	4 cut(s)	1701, 2860, 4078, 4243
BsmAI	GTCTC	4 cut(s)	2786, 3027, 3320, 4540
BsmBI	CGTCTC	1 cut(s)	4540
BsmFI	GGGAC	4 cut(s)	1701, 2860, 4078, 4243
BsmI	GAATGC	5 cut(s)	457, 1963, 2872, 3079, 3807
Bso31I	GGTCTC	1 cut(s)	3320
BsoBI	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
Bsp119I	TTCGAA	2 cut(s)	3355, 4665
Bsp120I	GGGCCC	2 cut(s)	3303, 3322
Bsp13I	TCCGGA	3 cut(s)	496, 674, 1084
Bsp1407I	TGTACA	1 cut(s)	958
Bsp19I	CCATGG	3 cut(s)	1428, 2039, 2499
BspCNI	CTCAG	9 cut(s)	298, 1170, 1570, 2014, 2689, 3169, 3470, 3727, 3932
BspDI	ATCGAT	1 cut(s)	3259
BspEI	TCCGGA	3 cut(s)	496, 674, 1084
BspFNI	CGCG	2 cut(s)	62, 3195
BspHI	TCATGA	4 cut(s)	1614, 1860, 3183, 4398
BspMAI	CTGCAG	2 cut(s)	2077, 2371
BspMI	ACCTGC	1 cut(s)	2080
BspOI	GCTAGC	1 cut(s)	3959
BspQI	GCTCTTC	3 cut(s)	275, 512, 4073
BspT104I	TTCGAA	2 cut(s)	3355, 4665
BspTNI	GGTCTC	1 cut(s)	3320
BsrDI	GCAATG	5 cut(s)	617, 1775, 2178, 3168, 4590
BsrFI	RCCGGY	4 cut(s)	868, 1565, 1917, 3204
BsrGI	TGTACA	1 cut(s)	958
BssAI	RCCGGY	4 cut(s)	868, 1565, 1917, 3204
BssNI	GRCGYC	1 cut(s)	3637
BssSI	CACGAG	2 cut(s)	3024, 3663
BssT1I	CCWWGG	9 cut(s)	710, 1077, 1428, 1971, 2039, 2125, 2499, 3406, 3595
Bst2BI	CACGAG	2 cut(s)	3024, 3663
BstACI	GRCGYC	1 cut(s)	3637
BstAPI	GCANNNNNTGC	2 cut(s)	2519, 3423
BstAUI	TGTACA	1 cut(s)	958
BstBI	TTCGAA	2 cut(s)	3355, 4665
BstC8I	GCNNGC	9 cut(s)	660, 1277, 2451, 2455, 3303, 3453, 3957, 3961, 4152
BstDSI	CCRYGG	3 cut(s)	1428, 2039, 2499
BstEII	GGTNACC	1 cut(s)	3200
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstFNI	CGCG	2 cut(s)	62, 3195
BstH2I	RGCGCY	1 cut(s)	193
BstHHI	GCGC	2 cut(s)	192, 1023
BstMAI	GTCTC	4 cut(s)	2786, 3027, 3320, 4540
BstMCI	CGRYCG	1 cut(s)	1327
BstNSI	RCATGY	2 cut(s)	352, 3455
BstPI	GGTNACC	1 cut(s)	3200
BstSFI	CTRYAG	7 cut(s)	777, 2073, 2092, 2268, 2367, 2955, 3912
BstSLI	GKGCMC	5 cut(s)	1401, 2255, 2482, 3307, 3326
BstUI	CGCG	2 cut(s)	62, 3195
BstV2I	GAAGAC	2 cut(s)	1095, 3732
BstX2I	RGATCY	6 cut(s)	23, 301, 1432, 2272, 2371, 2599
BstXI	CCANNNNNNTGG	1 cut(s)	2843
BstYI	RGATCY	6 cut(s)	23, 301, 1432, 2272, 2371, 2599
Bsu15I	ATCGAT	1 cut(s)	3259
BsuTUI	ATCGAT	1 cut(s)	3259
BtgI	CCRYGG	3 cut(s)	1428, 2039, 2499
BtsI	GCAGTG	3 cut(s)	2364, 2933, 4469
BveI	ACCTGC	1 cut(s)	2080
Cac8I	GCNNGC	9 cut(s)	660, 1277, 2451, 2455, 3303, 3453, 3957, 3961, 4152
CaiI	CAGNNNCTG	3 cut(s)	3423, 3776, 4500
CciI	TCATGA	4 cut(s)	1614, 1860, 3183, 4398
CfoI	GCGC	2 cut(s)	192, 1023
Cfr10I	RCCGGY	4 cut(s)	868, 1565, 1917, 3204
Cfr9I	CCCGGG	1 cut(s)	1595
ClaI	ATCGAT	1 cut(s)	3259
CseI	GACGC	1 cut(s)	3645
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	5 cut(s)	959, 1039, 1735, 3592, 4641
CspAI	ACCGGT	2 cut(s)	868, 1917
CspCI	CAANNNNNGTGG	2 cut(s)	3564, 3599
CviQI	GTAC	5 cut(s)	959, 1039, 1735, 3592, 4641
DraIII	CACNNNGTG	1 cut(s)	3647
EaeI	YGGCCR	3 cut(s)	1306, 1563, 3035
EciI	GGCGGA	4 cut(s)	214, 368, 497, 2987
Ecl136II	GAGCTC	2 cut(s)	1251, 1514
Eco130I	CCWWGG	9 cut(s)	710, 1077, 1428, 1971, 2039, 2125, 2499, 3406, 3595
Eco147I	AGGCCT	1 cut(s)	2047
Eco24I	GRGCYC	5 cut(s)	1253, 1516, 2565, 3307, 3326
Eco31I	GGTCTC	1 cut(s)	3320
Eco32I	GATATC	2 cut(s)	2353, 2995
Eco47I	GGWCC	3 cut(s)	1082, 3898, 4230
Eco47III	AGCGCT	1 cut(s)	191
Eco53kI	GAGCTC	2 cut(s)	1251, 1514
Eco57I	CTGAAG	6 cut(s)	370, 536, 2569, 3495, 3798, 4477
Eco88I	CYCGRG	4 cut(s)	185, 1509, 1595, 3964
Eco91I	GGTNACC	1 cut(s)	3200
EcoICRI	GAGCTC	2 cut(s)	1251, 1514
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoO109I	RGGNCCY	3 cut(s)	3304, 3322, 3898
EcoO65I	GGTNACC	1 cut(s)	3200
EcoRI	GAATTC	1 cut(s)	4667
EcoRV	GATATC	2 cut(s)	2353, 2995
EcoT14I	CCWWGG	9 cut(s)	710, 1077, 1428, 1971, 2039, 2125, 2499, 3406, 3595
EcoT22I	ATGCAT	2 cut(s)	3682, 3853
EcoT38I	GRGCYC	5 cut(s)	1253, 1516, 2565, 3307, 3326
ErhI	CCWWGG	9 cut(s)	710, 1077, 1428, 1971, 2039, 2125, 2499, 3406, 3595
Esp3I	CGTCTC	1 cut(s)	4540
FaqI	GGGAC	4 cut(s)	1701, 2860, 4078, 4243
FauI	CCCGC	2 cut(s)	3294, 3947
FbaI	TGATCA	3 cut(s)	1909, 3046, 3136
FblI	GTMKAC	2 cut(s)	342, 4041
FriOI	GRGCYC	5 cut(s)	1253, 1516, 2565, 3307, 3326
GlaI	GCGC	2 cut(s)	191, 1022
GsaI	CCCAGC	3 cut(s)	105, 812, 3623
GsuI	CTGGAG	2 cut(s)	1327, 3302
HaeII	RGCGCY	1 cut(s)	193
HgaI	GACGC	1 cut(s)	3645
HhaI	GCGC	2 cut(s)	192, 1023
Hin1I	GRCGYC	1 cut(s)	3637
Hin6I	GCGC	2 cut(s)	190, 1021
HinP1I	GCGC	2 cut(s)	190, 1021
HincII	GTYRAC	3 cut(s)	1869, 2856, 4408
HindII	GTYRAC	3 cut(s)	1869, 2856, 4408
HindIII	AAGCTT	3 cut(s)	1133, 2447, 2756
Hpy99I	CGWCG	5 cut(s)	110, 179, 263, 1149, 2712
HpyCH4IV	ACGT	7 cut(s)	339, 564, 1156, 2656, 2707, 3844, 4002
HpySE526I	ACGT	7 cut(s)	339, 564, 1156, 2656, 2707, 3844, 4002
Hsp92I	GRCGYC	1 cut(s)	3637
HspAI	GCGC	2 cut(s)	190, 1021
Kpn2I	TCCGGA	3 cut(s)	496, 674, 1084
Ksp22I	TGATCA	3 cut(s)	1909, 3046, 3136
LguI	GCTCTTC	3 cut(s)	275, 512, 4073
LmnI	GCTCC	4 cut(s)	499, 892, 1459, 4467
MabI	ACCWGGT	1 cut(s)	964
MaeII	ACGT	7 cut(s)	339, 564, 1156, 2656, 2707, 3844, 4002
MflI	RGATCY	6 cut(s)	23, 301, 1432, 2272, 2371, 2599
MmeI	TCCRAC	4 cut(s)	870, 1497, 3316, 3733
Mph1103I	ATGCAT	2 cut(s)	3682, 3853
MroI	TCCGGA	3 cut(s)	496, 674, 1084
MspA1I	CMGCKG	4 cut(s)	812, 1199, 1792, 3623
Mva1269I	GAATGC	5 cut(s)	457, 1963, 2872, 3079, 3807
MvnI	CGCG	2 cut(s)	62, 3195
NciI	CCSGG	5 cut(s)	1596, 1597, 1719, 2326, 3645
NcoI	CCATGG	3 cut(s)	1428, 2039, 2499
NheI	GCTAGC	1 cut(s)	3955
NmeAIII	GCCGAG	1 cut(s)	1251
NmuCI	GTSAC	9 cut(s)	1159, 1297, 1376, 1854, 2882, 3200, 3787, 3835, 4322
NsiI	ATGCAT	2 cut(s)	3682, 3853
NspI	RCATGY	2 cut(s)	352, 3455
NspV	TTCGAA	2 cut(s)	3355, 4665
PaeI	GCATGC	1 cut(s)	3455
PaeR7I	CTCGAG	1 cut(s)	185
PagI	TCATGA	4 cut(s)	1614, 1860, 3183, 4398
PceI	AGGCCT	1 cut(s)	2047
PciSI	GCTCTTC	3 cut(s)	275, 512, 4073
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 1153
PctI	GAATGC	5 cut(s)	457, 1963, 2872, 3079, 3807
PflMI	CCANNNNNTGG	2 cut(s)	1429, 2939
PfoI	TCCNGGA	1 cut(s)	1717
PinAI	ACCGGT	2 cut(s)	868, 1917
PpuMI	RGGWCCY	1 cut(s)	3898
PshBI	ATTAAT	1 cut(s)	2685
Psp124BI	GAGCTC	2 cut(s)	1253, 1516
Psp1406I	AACGTT	1 cut(s)	4002
Psp5II	RGGWCCY	1 cut(s)	3898
PspEI	GGTNACC	1 cut(s)	3200
PspFI	CCCAGC	3 cut(s)	101, 808, 3619
PspOMI	GGGCCC	2 cut(s)	3303, 3322
PspPPI	RGGWCCY	1 cut(s)	3898
PspXI	VCTCGAGB	1 cut(s)	185
PsrI	GAACNNNNNNTAC	2 cut(s)	137, 169
PstI	CTGCAG	2 cut(s)	2077, 2371
PstNI	CAGNNNCTG	3 cut(s)	3423, 3776, 4500
PsuI	RGATCY	6 cut(s)	23, 301, 1432, 2272, 2371, 2599
PvuII	CAGCTG	2 cut(s)	812, 3623
RsaI	GTAC	5 cut(s)	960, 1040, 1736, 3593, 4642
RsaNI	GTAC	5 cut(s)	959, 1039, 1735, 3592, 4641
SacI	GAGCTC	2 cut(s)	1253, 1516
SapI	GCTCTTC	3 cut(s)	275, 512, 4073
ScaI	AGTACT	1 cut(s)	1040
SexAI	ACCWGGT	1 cut(s)	964
SfcI	CTRYAG	7 cut(s)	777, 2073, 2092, 2268, 2367, 2955, 3912
Sfr274I	CTCGAG	1 cut(s)	185
SfuI	TTCGAA	2 cut(s)	3355, 4665
SinI	GGWCC	3 cut(s)	1082, 3898, 4230
SlaI	CTCGAG	1 cut(s)	185
SmaI	CCCGGG	1 cut(s)	1597
SmlI	CTYRAG	5 cut(s)	185, 638, 1042, 3490, 4160
SmoI	CTYRAG	5 cut(s)	185, 638, 1042, 3490, 4160
SphI	GCATGC	1 cut(s)	3455
SseBI	AGGCCT	1 cut(s)	2047
SspI	AATATT	2 cut(s)	994, 2106
SstI	GAGCTC	2 cut(s)	1253, 1516
StuI	AGGCCT	1 cut(s)	2047
StyI	CCWWGG	9 cut(s)	710, 1077, 1428, 1971, 2039, 2125, 2499, 3406, 3595
TaiI	ACGT	7 cut(s)	342, 567, 1159, 2659, 2710, 3847, 4005
TatI	WGTACW	3 cut(s)	958, 1038, 1734
TauI	GCSGC	3 cut(s)	65, 1311, 3037
TseFI	GTSAC	9 cut(s)	1159, 1297, 1376, 1854, 2882, 3200, 3787, 3835, 4322
Tsp45I	GTSAC	9 cut(s)	1159, 1297, 1376, 1854, 2882, 3200, 3787, 3835, 4322
TspGWI	ACGGA	3 cut(s)	665, 2071, 3893
TspMI	CCCGGG	1 cut(s)	1595
Van91I	CCANNNNNTGG	2 cut(s)	1429, 2939
VneI	GTGCAC	2 cut(s)	1397, 2478
VpaK11BI	GGWCC	3 cut(s)	1082, 3898, 4230
VspI	ATTAAT	1 cut(s)	2685
XagI	CCTNNNNNAGG	1 cut(s)	903
XapI	RAATTY	3 cut(s)	1185, 2294, 4667
XbaI	TCTAGA	1 cut(s)	1835
XceI	RCATGY	2 cut(s)	352, 3455
XcmI	CCANNNNNNNNNTGG	1 cut(s)	4537
XhoI	CTCGAG	1 cut(s)	185
XmaI	CCCGGG	1 cut(s)	1595
XmiI	GTMKAC	2 cut(s)	342, 4041
ZrmI	AGTACT	1 cut(s)	1040
Zsp2I	ATGCAT	2 cut(s)	3682, 3853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.