Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0009767

Physical Location & Seq

Genomic Coordinates Reverse (-)

69518120 .. 69523668

Gene Structure 5549 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG442100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

ATGAATTCCTCAAGTATTCTTTCTCATTCAGTGTTACTTTTTCTGCCTGGTGACATTAATTTTGAGTTCATTGTTTTCATTCTCACAATTACTTTTGGCTCTGTTTGTGTCCACAGGCTTCTAATATTTGTCCGCATGGTTGTCCTTGGGCTGTTTTTGGCATGGAGGATAAGCAATCCAAATAGTGATGCAATGTGGCTTTGGGGAATGTCAATAGTTTGTGAGGTCTGGTTTGCTTTTTCGTGGCTTCTCGATCAACTTCCCAAGTTGTGCCCAATCAATCGTTCTACAGATCTTAATGTCTTGAGGGAGAAATTTGAAACACCTACTCTCAGCAACCCCACCGGGAAATCTGATCTTCCAGGCATAGATATCTTTGTGTCCACTGCAGATCCAGATAAAGAACCACCACTTGTTACAGCAAACACTATCTTATCTATTCTAGCTACTGATTACCCTGTTGAAAAGCTTGCTTGCTATGTTTCTGATGATGGAGGTGCACTTTTAACCTTTGAGGCCATGGCAGAAGCAGCAAGTTTTGCTAATATATGGGTTCCCTTCTGCCGTAAACATGGTATTGAGCCCAGGAATCCTGAATCTTACTTCAGTTTGAAGAGGGATCCATACAAGAACAAAGTGAAATCTGACTTTGTGAAGGATCGTAGAAGGGTGAAACGTGAATATGACGAGTTCAAGGTTCGGATTAATGGACTGCCTGAGTCTATACGTCGCCGATCAGATGCTTATCATGCCAGGGAGGAAATCAAGGCCATGAAGCTTCAAAGACAGAACAGAGAGGATGAACCTGTGGAGACTGTGAAGATTCCCAAAGCAACTTGGATGGCTGATGGAACCCACTGGCCTGGGACTTGGTTGACCTCTTCATCCGAGCATTCTAGGAGTGACCATGCTGGTATTATACAGGTGATGTTAAAACCCCCTAGTGAGGAACCACTGCATGGAACTGATGGAACTATAGATGAAGCTAGACTTATCGACCTCACTGATATTGATATCCGCCTTCCCATGCTTGTTTATGTGTCTCGTGAAAAGCGGCCAGGCTATGATCACAACAAGAAGGCAGGAGCCATGAATGCTCTTGTTCGAGCCTCTGCTATAATGTCCAATGGCCCATTCATTCTCAACCTCGACTGTGATCATTATATCTACAATTCTCAGGCAATGAGGGAAGGTATGTGCTTCATGATGGATCGCGGAGGTGACCGGCTCTGTTATGTTCAGTTCCCACAGAGATTTGAGGGTATTGACCCTTCGGATCGATATGCCAACCACAACACAGTTTTCTTTGATGTCAATATGCGGGCTCTTGATGGTCTCCAGGGCCCAGTTTATGTCGGAACTGGATGTCTATTTCGAAGAATTGCCCTGTATGGTTTTGACCCACCTCGATCAAAAGAACATCACCAAGGTTGTTGCAGTTGCTGCTTTTCTAGTCGTAAAAAGAATAAGCATGCCTCAGTAGCGCACACCCCTGAAGAAAACCGAGCCTTGAGAATGGGTGATTCTGATGATGAAGAGATGAATCTCTCCCTGCTGCCGAAGAGGTTTGGGAACTCAACTTTCCTCATCGACTCAATTCCAGTGGCAGAGTTCCAAGGTCGCCCTCTTGCAGATCACCCAGCTGTAAAGAATGGACGCCCACCCGGTGCTCTCACCATTCCTCGTGAGCTGCTTGATGCATCAACTGTTGCAGAGGCTATCAGTGTCATTTCCTGCTGGTATGAAGACAAGACTGAGTGGGGAGATCGTGTCGGATGGATTTACGGTTCAGTTACTGAAGATGTGGTCACTGGTTACAGAATGCACAACAGAGGATGGAAATCAGTTTACTGTGTGACCAAACGTGATGCATTTCGTGGAACTGCACCTATCAATCTCACTGATAGGTTGCATCAGGTCCTCCGTTGGGCTACAGGCTCAGTTGAAATCTTTTTCTCCCGCAACAATGCCCTGCTAGCCAGCCCGAGAATGAAGATTCTGCAAAGAGTAGCATATCTCAACGTTGGTATCTACCCGTTCACATCCATCTTCCTTATTGTCTACTGCTTCCTTCCTGCACTTTCGCTCTTCTCTGGTCAGTTCATTGTGCAGTCCCTCAATGTTACTTTCCTGACCTATCTTTTGGTCATTACTCTCACCTTATGTATGCTTGCCATACTTGAGATCAAATGGTCTGGCATTGAACTAGAAGAGTGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACCAGTGCTCACCTTGCTGCTGTGATTCAGGGGCTATTAAAAGTTATAGCAGGGATTGAAATCTCTTTCACCTTGACTTCAAAATCAGGTGGTGACGATGAGGATGATGACTTTGCTGATCTCTACATTGTGAAATGGACATCTCTGATGATACCCCCAATAACAATCATGATGGTCAACTTAATTGCAATAGCAGTTGGGTTCAGCAGAACAATATACAGCGTGATTCCGCAATGGAGCCGATTGATTGGAGGTGTTTTCTTCAGTTTCTGGGTTTTAGCACATCTATACCCTTTCGCCAAAGGATTGATGGGGAGACGAGGGAGGACACCTACCATTGTTTTTGTATGGTCAGGACTCATTGCAATCACCATCTCTCTTCTTTGGGTAGCAATCAATCCCCCTGCTGGTACAAACCAAATTGGAGGATCATTCGAATTCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016021 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0021700 GO:0022622 GO:0030154 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051753 GO:0060560 GO:0070085 GO:0071554 GO:0071669 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097502 GO:0097708 GO:0098588 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

898

Amino Acids

101.35

Weight (kDa)

6.72

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	123 - 888	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03050 AT5G16910
fragaria_vesca	FvH4_7g34010 FvH4_7g34010 FvH4_7g34010
malus_domestica	MD01G1236500.v1.1 MD07G1309200.v1.1
prunus_persica	Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384261
rosa_laevigata	RLG00000026053
rosa_multiflora	Rmu_sc0011271.1_g000003
rosa_rugosa	Rorug01G0446300
rosa_samantha	Rh1AG471800 Rh1BG429500 Rh1CG442100 Rh1DG462200
rosa_wichuraiana	Rw1G040080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	959
AccI	GTMKAC	1 cut(s)	2061
AccII	CGCG	1 cut(s)	1215
AciI	CCGC	7 cut(s)	133, 1018, 1054, 1215, 1321, 1960, 2480
AclI	AACGTT	1 cut(s)	2022
AclWI	GGATC	7 cut(s)	386, 614, 627, 666, 1218, 1284, 2686
AcoI	YGGCCR	1 cut(s)	1055
AcsI	RAATTY	3 cut(s)	4, 314, 2687
AcuI	CTGAAG	4 cut(s)	589, 1515, 1818, 2497
AcyI	GRCGYC	1 cut(s)	1657
AdeI	CACNNNGTG	1 cut(s)	1667
AfaI	GTAC	1 cut(s)	2662
AfiI	CCNNNNNNNGG	4 cut(s)	946, 959, 1927, 2657
AgsI	TTSAA	9 cut(s)	320, 464, 613, 694, 782, 1946, 2204, 2309, 2331
AjnI	CCWGG	7 cut(s)	46, 361, 584, 752, 862, 1057, 1338
AjuI	GAANNNNNNNTTGG	4 cut(s)	268, 300, 1118, 1150
AloI	GAACNNNNNNTCC	2 cut(s)	1771, 1803
AluBI	AGCT	6 cut(s)	446, 469, 778, 986, 1643, 1690
AluI	AGCT	6 cut(s)	446, 469, 778, 986, 1643, 1690
Alw21I	GWGCWC	3 cut(s)	502, 1672, 2260
Alw26I	GTCTC	4 cut(s)	806, 1047, 1340, 2560
Alw44I	GTGCAC	1 cut(s)	498
AlwI	GGATC	7 cut(s)	386, 614, 627, 666, 1218, 1284, 2686
AlwNI	CAGNNNCTG	3 cut(s)	1443, 1796, 2520
Ama87I	CYCGRG	1 cut(s)	1984
AoxI	GGCC	6 cut(s)	516, 768, 860, 1055, 1129, 1342
ApaI	GGGCCC	1 cut(s)	1346
ApaLI	GTGCAC	1 cut(s)	498
ApeKI	GCWGC	5 cut(s)	530, 1443, 1555, 1690, 2267
ApoI	RAATTY	3 cut(s)	4, 314, 2687
ArsI	GACNNNNNNTTYG	4 cut(s)	44, 76, 2125, 2157
AseI	ATTAAT	2 cut(s)	57, 705
AspLEI	GCGC	1 cut(s)	1486
AspS9I	GGNCC	5 cut(s)	1130, 1342, 1343, 1918, 2250
AsuC2I	CCSGG	2 cut(s)	346, 1665
AsuII	TTCGAA	2 cut(s)	1375, 2685
AsuNHI	GCTAGC	1 cut(s)	1975
AvaI	CYCGRG	1 cut(s)	1984
AvaII	GGWCC	2 cut(s)	1918, 2250
BaeGI	GKGCMC	3 cut(s)	275, 502, 1346
BaeI	ACNNNNGTAYC	2 cut(s)	2011, 2044
BamHI	GGATCC	1 cut(s)	619
BanII	GRGCYC	3 cut(s)	585, 1327, 1346
BarI	GAAGNNNNNNTAC	2 cut(s)	1255, 1287
BauI	CACGAG	2 cut(s)	1044, 1683
BbsI	GAAGAC	1 cut(s)	1752
Bbv12I	GWGCWC	3 cut(s)	502, 1672, 2260
BbvI	GCAGC	5 cut(s)	542, 1430, 1542, 1677, 2254
BceAI	ACGGC	1 cut(s)	549
BciT130I	CCWGG	7 cut(s)	48, 363, 586, 754, 864, 1059, 1340
BclI	TGATCA	2 cut(s)	1066, 1156
BcnI	CCSGG	2 cut(s)	346, 1665
BcoDI	GTCTC	4 cut(s)	806, 1047, 1340, 2560
BfaI	CTAG	7 cut(s)	443, 897, 942, 987, 1452, 1976, 2207
BfmI	CTRYAG	4 cut(s)	288, 387, 975, 1932
BglII	AGATCT	1 cut(s)	292
BisI	GCNGC	6 cut(s)	531, 1055, 1444, 1556, 1691, 2268
BlsI	GCNGC	6 cut(s)	532, 1056, 1445, 1557, 1692, 2269
Bme1390I	CCNGG	9 cut(s)	48, 346, 363, 586, 754, 864, 1059, 1340, 1665
Bme18I	GGWCC	2 cut(s)	1918, 2250
BmeT110I	CYCGRG	1 cut(s)	1984
BmgT120I	GGNCC	5 cut(s)	1130, 1342, 1343, 1918, 2250
BmiI	GGNNCC	8 cut(s)	555, 621, 853, 951, 1087, 1344, 2251, 2489
BmrFI	CCNGG	9 cut(s)	48, 346, 363, 586, 754, 864, 1059, 1340, 1665
BmrI	ACTGGG	1 cut(s)	1340
BmsI	GCATC	6 cut(s)	178, 730, 1687, 1709, 1858, 1921
BmtI	GCTAGC	1 cut(s)	1979
BmuI	ACTGGG	1 cut(s)	1340
BpiI	GAAGAC	1 cut(s)	1752
BpmI	CTGGAG	1 cut(s)	1322
Bpu14I	TTCGAA	2 cut(s)	1375, 2685
BpuEI	CTTGAG	3 cut(s)	325, 1531, 2201
BpuMI	CCSGG	2 cut(s)	346, 1665
Bsa29I	ATCGAT	1 cut(s)	1279
BsaBI	GATNNNNATC	3 cut(s)	744, 1840, 2309
BsaHI	GRCGYC	1 cut(s)	1657
BsaI	GGTCTC	1 cut(s)	1340
BsaJI	CCNNGG	8 cut(s)	145, 519, 584, 753, 863, 1339, 1426, 1615
BsaXI	ACNNNNNCTCC	2 cut(s)	1755, 1785
Bsc4I	CCNNNNNNNGG	4 cut(s)	946, 959, 1927, 2657
Bse118I	RCCGGY	1 cut(s)	1224
Bse1I	ACTGG	6 cut(s)	863, 1346, 1366, 1601, 1816, 2253
Bse3DI	GCAATG	4 cut(s)	198, 1188, 2489, 2610
Bse8I	GATNNNNATC	3 cut(s)	744, 1840, 2309
BseBI	CCWGG	7 cut(s)	48, 363, 586, 754, 864, 1059, 1340
BseCI	ATCGAT	1 cut(s)	1279
BseDI	CCNNGG	8 cut(s)	145, 519, 584, 753, 863, 1339, 1426, 1615
BseGI	GGATG	8 cut(s)	805, 846, 884, 1370, 1781, 1841, 2042, 2359
BseJI	GATNNNNATC	3 cut(s)	744, 1840, 2309
BseLI	CCNNNNNNNGG	4 cut(s)	946, 959, 1927, 2657
BseMI	GCAATG	4 cut(s)	198, 1188, 2489, 2610
BseMII	CTCAG	6 cut(s)	346, 708, 1190, 1491, 1746, 1953
BseNI	ACTGG	6 cut(s)	863, 1346, 1366, 1601, 1816, 2253
BseSI	GKGCMC	3 cut(s)	275, 502, 1346
BseXI	GCAGC	5 cut(s)	542, 1430, 1542, 1677, 2254
BseYI	CCCAGC	1 cut(s)	1639
BsgI	GTGCAG	3 cut(s)	1869, 2061, 2129
Bsh1236I	CGCG	1 cut(s)	1215
BshFI	GGCC	6 cut(s)	518, 770, 862, 1057, 1131, 1344
BshVI	ATCGAT	1 cut(s)	1279
BsiHKAI	GWGCWC	3 cut(s)	502, 1672, 2260
BsiHKCI	CYCGRG	1 cut(s)	1984
BsiSI	CCGG	3 cut(s)	345, 1225, 1665
BslFI	GGGAC	3 cut(s)	880, 2098, 2263
BslI	CCNNNNNNNGG	4 cut(s)	946, 959, 1927, 2657
BsmAI	GTCTC	4 cut(s)	806, 1047, 1340, 2560
BsmBI	CGTCTC	1 cut(s)	2560
BsmFI	GGGAC	3 cut(s)	880, 2098, 2263
BsmI	GAATGC	3 cut(s)	892, 1099, 1827
BsnI	GGCC	6 cut(s)	518, 770, 862, 1057, 1131, 1344
Bso31I	GGTCTC	1 cut(s)	1340
BsoBI	CYCGRG	1 cut(s)	1984
Bsp119I	TTCGAA	2 cut(s)	1375, 2685
Bsp120I	GGGCCC	1 cut(s)	1342
Bsp1286I	GDGCHC	7 cut(s)	275, 502, 585, 1327, 1346, 1672, 2260
Bsp19I	CCATGG	1 cut(s)	519
BspACI	CCGC	7 cut(s)	133, 1018, 1054, 1215, 1321, 1960, 2480
BspANI	GGCC	6 cut(s)	518, 770, 862, 1057, 1131, 1344
BspCNI	CTCAG	6 cut(s)	345, 709, 1189, 1490, 1747, 1952
BspDI	ATCGAT	1 cut(s)	1279
BspFNI	CGCG	1 cut(s)	1215
BspHI	TCATGA	2 cut(s)	1203, 2418
BspLI	GGNNCC	8 cut(s)	555, 621, 853, 951, 1087, 1344, 2251, 2489
BspMAI	CTGCAG	1 cut(s)	391
BspOI	GCTAGC	1 cut(s)	1979
BspPI	GGATC	7 cut(s)	386, 614, 627, 666, 1218, 1284, 2686
BspQI	GCTCTTC	1 cut(s)	2093
BspT104I	TTCGAA	2 cut(s)	1375, 2685
BspTNI	GGTCTC	1 cut(s)	1340
BsrDI	GCAATG	4 cut(s)	198, 1188, 2489, 2610
BsrFI	RCCGGY	1 cut(s)	1224
BsrI	ACTGG	6 cut(s)	863, 1346, 1366, 1601, 1816, 2253
BssAI	RCCGGY	1 cut(s)	1224
BssECI	CCNNGG	8 cut(s)	145, 519, 584, 753, 863, 1339, 1426, 1615
BssNI	GRCGYC	1 cut(s)	1657
BssSI	CACGAG	2 cut(s)	1044, 1683
BssT1I	CCWWGG	4 cut(s)	145, 519, 1426, 1615
Bst2BI	CACGAG	2 cut(s)	1044, 1683
Bst2UI	CCWGG	7 cut(s)	48, 363, 586, 754, 864, 1059, 1340
Bst4CI	ACNGT	6 cut(s)	817, 1154, 1300, 1708, 1787, 1853
Bst6I	CTCTTC	7 cut(s)	608, 886, 1530, 1556, 2093, 2205, 2634
BstACI	GRCGYC	1 cut(s)	1657
BstAPI	GCANNNNNTGC	2 cut(s)	539, 1443
BstBI	TTCGAA	2 cut(s)	1375, 2685
BstC8I	GCNNGC	7 cut(s)	471, 475, 1323, 1473, 1977, 1981, 2172
BstDEI	CTNAG	6 cut(s)	332, 717, 1176, 1477, 1755, 1939
BstDSI	CCRYGG	1 cut(s)	519
BstEII	GGTNACC	1 cut(s)	1220
BstF5I	GGATG	8 cut(s)	805, 846, 884, 1370, 1781, 1841, 2042, 2359
BstFNI	CGCG	1 cut(s)	1215
BstHHI	GCGC	1 cut(s)	1486
BstMAI	GTCTC	4 cut(s)	806, 1047, 1340, 2560
BstMWI	GCNNNNNNNGC	8 cut(s)	530, 539, 749, 1094, 1443, 1481, 1976, 2264
BstNI	CCWGG	7 cut(s)	48, 363, 586, 754, 864, 1059, 1340
BstNSI	RCATGY	1 cut(s)	1475
BstPI	GGTNACC	1 cut(s)	1220
BstSCI	CCNGG	9 cut(s)	46, 344, 361, 584, 752, 862, 1057, 1338, 1663
BstSFI	CTRYAG	4 cut(s)	288, 387, 975, 1932
BstSLI	GKGCMC	3 cut(s)	275, 502, 1346
BstUI	CGCG	1 cut(s)	1215
BstV1I	GCAGC	5 cut(s)	542, 1430, 1542, 1677, 2254
BstV2I	GAAGAC	1 cut(s)	1752
BstX2I	RGATCY	3 cut(s)	292, 391, 619
BstXI	CCANNNNNNTGG	1 cut(s)	863
BstYI	RGATCY	3 cut(s)	292, 391, 619
Bsu15I	ATCGAT	1 cut(s)	1279
BsuRI	GGCC	6 cut(s)	518, 770, 862, 1057, 1131, 1344
BsuTUI	ATCGAT	1 cut(s)	1279
BtgI	CCRYGG	1 cut(s)	519
BtsCI	GGATG	8 cut(s)	805, 846, 884, 1370, 1781, 1841, 2042, 2359
BtsI	GCAGTG	2 cut(s)	384, 953
Cac8I	GCNNGC	7 cut(s)	471, 475, 1323, 1473, 1977, 1981, 2172
CaiI	CAGNNNCTG	3 cut(s)	1443, 1796, 2520
CciI	TCATGA	2 cut(s)	1203, 2418
CfoI	GCGC	1 cut(s)	1486
Cfr10I	RCCGGY	1 cut(s)	1224
Cfr13I	GGNCC	5 cut(s)	1130, 1342, 1343, 1918, 2250
ClaI	ATCGAT	1 cut(s)	1279
CseI	GACGC	1 cut(s)	1665
Csp6I	GTAC	1 cut(s)	2661
CspCI	CAANNNNNGTGG	2 cut(s)	1584, 1619
CviQI	GTAC	1 cut(s)	2661
DdeI	CTNAG	6 cut(s)	332, 717, 1176, 1477, 1755, 1939
DraIII	CACNNNGTG	1 cut(s)	1667
EaeI	YGGCCR	1 cut(s)	1055
Eam1104I	CTCTTC	7 cut(s)	608, 886, 1530, 1556, 2093, 2205, 2634
EarI	CTCTTC	7 cut(s)	608, 886, 1530, 1556, 2093, 2205, 2634
EciI	GGCGGA	1 cut(s)	1007
Eco130I	CCWWGG	4 cut(s)	145, 519, 1426, 1615
Eco24I	GRGCYC	3 cut(s)	585, 1327, 1346
Eco31I	GGTCTC	1 cut(s)	1340
Eco32I	GATATC	2 cut(s)	373, 1015
Eco47I	GGWCC	2 cut(s)	1918, 2250
Eco57I	CTGAAG	4 cut(s)	589, 1515, 1818, 2497
Eco88I	CYCGRG	1 cut(s)	1984
Eco91I	GGTNACC	1 cut(s)	1220
EcoO109I	RGGNCCY	2 cut(s)	1342, 1918
EcoO65I	GGTNACC	1 cut(s)	1220
EcoRI	GAATTC	2 cut(s)	4, 2687
EcoRII	CCWGG	7 cut(s)	46, 361, 584, 752, 862, 1057, 1338
EcoRV	GATATC	2 cut(s)	373, 1015
EcoT14I	CCWWGG	4 cut(s)	145, 519, 1426, 1615
EcoT22I	ATGCAT	2 cut(s)	1702, 1873
EcoT38I	GRGCYC	3 cut(s)	585, 1327, 1346
ErhI	CCWWGG	4 cut(s)	145, 519, 1426, 1615
Esp3I	CGTCTC	1 cut(s)	2560
FalI	AAGNNNNNCTT	2 cut(s)	975, 1007
FaqI	GGGAC	3 cut(s)	880, 2098, 2263
FauI	CCCGC	2 cut(s)	1314, 1967
FbaI	TGATCA	2 cut(s)	1066, 1156
FblI	GTMKAC	1 cut(s)	2061
Fnu4HI	GCNGC	6 cut(s)	531, 1055, 1444, 1556, 1691, 2268
FokI	GGATG	8 cut(s)	812, 853, 871, 1377, 1788, 1848, 2029, 2366
FriOI	GRGCYC	3 cut(s)	585, 1327, 1346
Fsp4HI	GCNGC	6 cut(s)	531, 1055, 1444, 1556, 1691, 2268
FspBI	CTAG	7 cut(s)	443, 897, 942, 987, 1452, 1976, 2207
GlaI	GCGC	1 cut(s)	1485
GluI	GCNGC	6 cut(s)	531, 1055, 1444, 1556, 1691, 2268
GsaI	CCCAGC	1 cut(s)	1643
GsuI	CTGGAG	1 cut(s)	1322
HaeIII	GGCC	6 cut(s)	518, 770, 862, 1057, 1131, 1344
HapII	CCGG	3 cut(s)	345, 1225, 1665
HgaI	GACGC	1 cut(s)	1665
HhaI	GCGC	1 cut(s)	1486
Hin1I	GRCGYC	1 cut(s)	1657
Hin6I	GCGC	1 cut(s)	1484
HinP1I	GCGC	1 cut(s)	1484
HincII	GTYRAC	2 cut(s)	876, 2428
HindII	GTYRAC	2 cut(s)	876, 2428
HindIII	AAGCTT	2 cut(s)	467, 776
HpaII	CCGG	3 cut(s)	345, 1225, 1665
Hpy166II	GTNNAC	9 cut(s)	112, 384, 500, 569, 876, 1849, 2040, 2062, 2428
Hpy8I	GTNNAC	9 cut(s)	112, 384, 500, 569, 876, 1849, 2040, 2062, 2428
Hpy99I	CGWCG	1 cut(s)	732
HpyAV	CCTTC	8 cut(s)	568, 649, 660, 1031, 1072, 1184, 1281, 2081
HpyCH4III	ACNGT	6 cut(s)	817, 1154, 1300, 1708, 1787, 1853
HpyCH4IV	ACGT	4 cut(s)	676, 727, 1864, 2022
HpyF10VI	GCNNNNNNNGC	8 cut(s)	530, 539, 749, 1094, 1443, 1481, 1976, 2264
HpyF3I	CTNAG	6 cut(s)	332, 717, 1176, 1477, 1755, 1939
HpySE526I	ACGT	4 cut(s)	676, 727, 1864, 2022
Hsp92I	GRCGYC	1 cut(s)	1657
HspAI	GCGC	1 cut(s)	1484
Ksp22I	TGATCA	2 cut(s)	1066, 1156
LguI	GCTCTTC	1 cut(s)	2093
LmnI	GCTCC	2 cut(s)	1085, 2487
Lsp1109I	GCAGC	5 cut(s)	542, 1430, 1542, 1677, 2254
LweI	GCATC	6 cut(s)	178, 730, 1687, 1709, 1858, 1921
MaeI	CTAG	7 cut(s)	443, 897, 942, 987, 1452, 1976, 2207
MaeII	ACGT	4 cut(s)	676, 727, 1864, 2022
MflI	RGATCY	3 cut(s)	292, 391, 619
MhlI	GDGCHC	7 cut(s)	275, 502, 585, 1327, 1346, 1672, 2260
MlyI	GAGTC	3 cut(s)	728, 1586, 2601
MmeI	TCCRAC	2 cut(s)	1336, 1753
Mph1103I	ATGCAT	2 cut(s)	1702, 1873
MseI	TTAA	7 cut(s)	57, 297, 506, 705, 932, 2288, 2432
MspA1I	CMGCKG	1 cut(s)	1643
MspI	CCGG	3 cut(s)	345, 1225, 1665
MspR9I	CCNGG	9 cut(s)	48, 346, 363, 586, 754, 864, 1059, 1340, 1665
Mva1269I	GAATGC	3 cut(s)	892, 1099, 1827
MvaI	CCWGG	7 cut(s)	48, 363, 586, 754, 864, 1059, 1340
MvnI	CGCG	1 cut(s)	1215
MwoI	GCNNNNNNNGC	8 cut(s)	530, 539, 749, 1094, 1443, 1481, 1976, 2264
NciI	CCSGG	2 cut(s)	346, 1665
NcoI	CCATGG	1 cut(s)	519
NheI	GCTAGC	1 cut(s)	1975
NlaIV	GGNNCC	8 cut(s)	555, 621, 853, 951, 1087, 1344, 2251, 2489
NmuCI	GTSAC	6 cut(s)	50, 902, 1220, 1807, 1855, 2342
NsiI	ATGCAT	2 cut(s)	1702, 1873
NspI	RCATGY	1 cut(s)	1475
NspV	TTCGAA	2 cut(s)	1375, 2685
PaeI	GCATGC	1 cut(s)	1475
PagI	TCATGA	2 cut(s)	1203, 2418
PciSI	GCTCTTC	1 cut(s)	2093
PctI	GAATGC	3 cut(s)	892, 1099, 1827
PfeI	GAWTC	8 cut(s)	589, 596, 823, 1523, 1543, 1996, 2275, 2476
PflMI	CCANNNNNTGG	1 cut(s)	959
PkrI	GCNGC	6 cut(s)	532, 1056, 1445, 1557, 1692, 2269
PleI	GAGTC	3 cut(s)	727, 1586, 2601
PpsI	GAGTC	3 cut(s)	727, 1586, 2601
PpuMI	RGGWCCY	1 cut(s)	1918
PshBI	ATTAAT	2 cut(s)	57, 705
Psp1406I	AACGTT	1 cut(s)	2022
Psp5II	RGGWCCY	1 cut(s)	1918
Psp6I	CCWGG	7 cut(s)	46, 361, 584, 752, 862, 1057, 1338
PspEI	GGTNACC	1 cut(s)	1220
PspFI	CCCAGC	1 cut(s)	1639
PspGI	CCWGG	7 cut(s)	46, 361, 584, 752, 862, 1057, 1338
PspN4I	GGNNCC	8 cut(s)	555, 621, 853, 951, 1087, 1344, 2251, 2489
PspOMI	GGGCCC	1 cut(s)	1342
PspPI	GGNCC	5 cut(s)	1130, 1342, 1343, 1918, 2250
PspPPI	RGGWCCY	1 cut(s)	1918
PstI	CTGCAG	1 cut(s)	391
PstNI	CAGNNNCTG	3 cut(s)	1443, 1796, 2520
PsuI	RGATCY	3 cut(s)	292, 391, 619
PvuII	CAGCTG	1 cut(s)	1643
RsaI	GTAC	1 cut(s)	2662
RsaNI	GTAC	1 cut(s)	2661
SapI	GCTCTTC	1 cut(s)	2093
SaqAI	TTAA	7 cut(s)	57, 297, 506, 705, 932, 2288, 2432
SatI	GCNGC	6 cut(s)	531, 1055, 1444, 1556, 1691, 2268
Sau96I	GGNCC	5 cut(s)	1130, 1342, 1343, 1918, 2250
SchI	GAGTC	3 cut(s)	728, 1586, 2601
ScrFI	CCNGG	9 cut(s)	48, 346, 363, 586, 754, 864, 1059, 1340, 1665
SduI	GDGCHC	7 cut(s)	275, 502, 585, 1327, 1346, 1672, 2260
SfaNI	GCATC	6 cut(s)	178, 730, 1687, 1709, 1858, 1921
SfcI	CTRYAG	4 cut(s)	288, 387, 975, 1932
SfuI	TTCGAA	2 cut(s)	1375, 2685
SinI	GGWCC	2 cut(s)	1918, 2250
SmlI	CTYRAG	4 cut(s)	10, 304, 1510, 2180
SmoI	CTYRAG	4 cut(s)	10, 304, 1510, 2180
SphI	GCATGC	1 cut(s)	1475
SsiI	CCGC	7 cut(s)	133, 1018, 1054, 1215, 1321, 1960, 2480
SspI	AATATT	1 cut(s)	126
SspMI	CTAG	7 cut(s)	443, 897, 942, 987, 1452, 1976, 2207
StyD4I	CCNGG	9 cut(s)	46, 344, 361, 584, 752, 862, 1057, 1338, 1663
StyI	CCWWGG	4 cut(s)	145, 519, 1426, 1615
TaaI	ACNGT	6 cut(s)	817, 1154, 1300, 1708, 1787, 1853
TaiI	ACGT	4 cut(s)	679, 730, 1867, 2025
TaqI	TCGA	9 cut(s)	252, 996, 1105, 1149, 1279, 1375, 1408, 1590, 2685
TauI	GCSGC	1 cut(s)	1057
TfiI	GAWTC	8 cut(s)	589, 596, 823, 1523, 1543, 1996, 2275, 2476
Tru1I	TTAA	7 cut(s)	57, 297, 506, 705, 932, 2288, 2432
Tru9I	TTAA	7 cut(s)	57, 297, 506, 705, 932, 2288, 2432
TseFI	GTSAC	6 cut(s)	50, 902, 1220, 1807, 1855, 2342
TseI	GCWGC	5 cut(s)	530, 1443, 1555, 1690, 2267
Tsp45I	GTSAC	6 cut(s)	50, 902, 1220, 1807, 1855, 2342
TspGWI	ACGGA	1 cut(s)	1913
Van91I	CCANNNNNTGG	1 cut(s)	959
VneI	GTGCAC	1 cut(s)	498
VpaK11BI	GGWCC	2 cut(s)	1918, 2250
VspI	ATTAAT	2 cut(s)	57, 705
XapI	RAATTY	3 cut(s)	4, 314, 2687
XceI	RCATGY	1 cut(s)	1475
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2557
XmiI	GTMKAC	1 cut(s)	2061
XspI	CTAG	7 cut(s)	443, 897, 942, 987, 1452, 1976, 2207
Zsp2I	ATGCAT	2 cut(s)	1702, 1873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.