Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0009767

Physical Location & Seq

Genomic Coordinates Reverse (-)

24056392 .. 24061842

Gene Structure 5451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g34010.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3450 bp

ATGGCTGGTAAATCGTTCAAGGGTACTCGATCAAATCTATCATCCAGCTCTGACATTCCCGATGCACTCGGCAAGCCTCCAATTCCTACAGTCACATTCGGCCGCAGAACCTCCTCCGGTCGCTACATCAGCTACTCCAGGGATGATCTCGATAGCGAAATTGGGAGTGGTGACTTTATGAACTACACAGTGCACATACCTCCGACCCCAGACAACCAGCCCATGGATCCATCCATTTCGCAGAAGGTCGAAGAGCAGTATGTGTCGAACTCGCTTTTCACTGGGGGATTCAACAGTGTTACACGAGCTCATCTTATGGACAAAGTGATTGAATCCGAAACCAACCATCCTCAGATGGCTGGTGCCAAAGGGTCATCATGTTCCATTCCCGGGTGTGATGCAAAGGTCATGAGCGATCAACGCGGGGAGGACATTCTACCCTGTGAGTGTGATTTCAAGATATGTAGAGATTGCTATACTGATGCTGTGAAAACAGGGGGTGGTGTATGTCCTGGATGCAAGGAACCATACAAGAACACTGATTTGGATGAAATGGCAATGGAGAGTGCATTGCCTCCGCTTCCCCTGCCTCTGCCTAATGGGATGTCTAAAATGGAGAGGAGGTTGTCACTAATGAAGTCAACAAAGTCGGTTCTGATGAGGAGTCAAACTGGTGATTTTGATCACAACCGGTGGCTCTTTGAAACTAAGGGAACTTATGGCTATGGGAATGCTATATGGTCCAAGGAGGGAGGTTTAGGAAATGGGAAAGATGATGATGTCGTTGAACCAACTGAGCTGATGAACAAACCATGGAGGCCTCTCACTCGGAAATTAAAGATACCTGCAGCTATTTTGAGCCCCTATAGGCTTCTAATATTTGTCCGTATGGTTGTCCTTGGGCTGTTTTTGGCATGGAGGATCAGCAACCCAAATACTGATGCAATGTGGCTTTGGGGAATGTCAATTGTTTGTGAAATCTGGTTTGCTTTTTCATGGCTGCTCGATCAACTTCCCAAGTTGTGCCCAATAAATCGTTCTACAGATCTTAATGTCTTGAGGGAGAAGTTTGAAACACCTACTATCAGCAACCCCACCGGGAAATCTGATCTTCCAGGCATAGATATCTTTGTGTCCACTGCAGATCCAGATAAAGAACCACCACTTGTCACAGCAAACACTATCTTGTCTATTCTAGCTACTGATTACCCTGTTGAAAAACTTGCTTGCTATGTTTCTGATGATGGAGGTGCACTTTTAACCTTTGAGGCCATGGCCGAAGCAGCTAGTTTTGCTAATATATGGGTCCCCTTCTGCCGTAAACATGCTATTGAACCCAGGAATCCTGAATCTTACTTCAGTTTGAAGAGGGATCCATACAAGAACAAAGTGAAATCTGACTTTGTTAAGGATCGTAGAAGGGTGAAACGTGAATATGATGAGTTCAAGGTTCGGATTAATGGACTGCCTGAGTCTATACGTCGCCGATCAGATGCTTATCATGCCAGGGAGGAAATCAAGGCCATGAAGCTTCAGAGACAGAACAGAGAGGATGAACCTGTGGAGAGTGTGAAGATTCCTAAAGCAACTTGGATGGCTGATGGAACCCACTGGCCAGGGACTTGGTTGACCTCTTCAGCTGAGCATTCTAGGAGTGACCATGCTGGTATTATACAGGTGATGTTAAAACCTCCTAGTGACGAACCATTGCATGGAGCTGATGGAACTATAGATGAAGCTAGACTCATCGACCTCACTGATATTGATATCCGCCTTCCCATGCTGGTTTATGTGTCTCGTGAAAAGCGGCCAGGCTATGATCACAACAAGAAGGCAGGGGCCATGAATGCTCTTGTTCGAGCCTCTGCTATAATGTCCAATGGCCCATTCATTCTCAACCTTGACTGTGATCATTATATCTACAACTCTCAGGCAATGAGGGAGGGTATGTGCTTCATGATGGATCGTGGAGGTGACCGGCTTTGTTATGTTCAGTTCCCACAGAGATTTGAGGGTATTGATCCTTCGGATCGATACGCCAACCACAACACAGTTTTCTTTGATGTCAATATGCGGGCTCTTGATGGTCTCCAGGGCCCAGTTTATGTTGGAACTGGATGTCTGTTTCGTAGAATTGCCCTGTATGGTTTTGACCCTCCTCGATCGAAAGAACATCACCAAGGTTGTTGCAGTTGCTGCTTCTCTAGTCGCAAAAAGAATAAGCATGCCTCAGTAGCACACACTCCTGAAGAAAACCGAGCCTTGAGAATGGGTGATTCTGATGATGAAGAGATGAATCTCTCGCTTCTGCCTAAGAGGTTCGGGAACTCGACTTTCCTCATCGACTCAATTCCAGTGGCAGAGTACCAAGGTCGGCCTCTTGCAGATCACCCGGCTGTAAAGAATGGACGACCACCCGGTGCTCTTACCATTCCTCGTGAGCTGCTTGATGCATCAACTGTAGCAGAGGCTATCAGTGTCATTTCCTGCTGGTATGAAGACAAGACTGAGTGGGGAGACCGTGTCGGATGGATTTATGGTTCAGTTACTGAAGATGTGGTCACTGGTTACAGAATGCACAACAGAGGATGGAAATCAGTTTACTGTGTGACCAAACGTGATGCTTTTCGTGGAACTGCACCTATCAATCTCACTGATAGGTTGCATCAGGTCCTCCGTTGGGCTACAGGCTCAGTTGAAATCTTTTTCTCCCGCAACAATGCCCTGCTAGCCAGCCCAAGAATGAAGCTTCTGCAAAGAATAGCATATCTCAATGTTGGTATCTACCCCTTCACATCCATCTTCCTTATCGTCTACTGCTTCCTCCCTGCACTTTCGCTCTTCTCTGGTCAGTTCATTGTGCAGTCCCTCAATGTTACTTTCCTGACCTATCTTTTGGTCATCACCCTCACCTTGTGTATGCTTGCCATACTTGAGATCAAATGGTCTGGCATTGAGCTAGAAGAGTGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACCAGTGCTCATCTTGCTGCTGTGATTCAGGGGCTATTGAAAGTTATTGCAGGGATTGAAATCTCATTCACCTTGACTTCAAAATCAGGTGGTGACGATGAGGATGATGAATTTGCTGACCTCTACATTGTGAAATGGTCATCTCTGATGATACCCCCAATAACAATCATGATGGTCAACTTAATTGCAATAGCAGTTGGATTCAGCAGAACAATATACAGCGTGATTCCGCAGTGGAGCCGATTGATTGGAGGTGTTTTCTTCAGTTTCTGGGTTTTAGCTCATCTCTACCCTTTCGCCAAAGGATTGATGGGGAGACGAGGCAGGACACCCACCATTGTTTTTGTATGGTCGGGACTCATTGCAATCACCATTTCTCTTCTTTGGGTGGCTATCAATCCCCCTGCGGGTGCAACCGAGATTGGAGGATCGTTCGAATTTCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000030 GO:0000139 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0005886 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009628 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0012505 GO:0016020 GO:0016021 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0019187 GO:0021700 GO:0022622 GO:0030154 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0051753 GO:0060560 GO:0070085 GO:0071554 GO:0071669 GO:0071695 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0097502 GO:0097708 GO:0098588 GO:0098791 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-RING_4

Protein Analysis

1150

Amino Acids

128.79

Weight (kDa)

6.55

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_4	PF14570	129 - 178	4.4e-18	RING/Ubox like zinc-binding domain
Cellulose_synt	PF03552	374 - 1139	0.0	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03050 AT5G16910
fragaria_vesca	FvH4_7g34010 FvH4_7g34010 FvH4_7g34010
malus_domestica	MD01G1236500.v1.1 MD07G1309200.v1.1
prunus_persica	Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1 Prupe.2G326600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384261
rosa_laevigata	RLG00000026053
rosa_multiflora	Rmu_sc0011271.1_g000003
rosa_rugosa	Rorug01G0446300
rosa_samantha	Rh1AG471800 Rh1BG429500 Rh1CG442100 Rh1DG462200
rosa_wichuraiana	Rw1G040080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	853
AccB1I	GGYRCC	1 cut(s)	362
AccB7I	CCANNNNNTGG	2 cut(s)	223, 1712
AccI	GTMKAC	1 cut(s)	2814
AccII	CGCG	1 cut(s)	423
AciI	CCGC	9 cut(s)	103, 423, 578, 1771, 1807, 2074, 2713, 3233, 3410
AcoI	YGGCCR	4 cut(s)	100, 1275, 1613, 1808
AcsI	RAATTY	2 cut(s)	3113, 3440
AcuI	CTGAAG	6 cut(s)	1342, 1517, 1620, 2268, 2571, 3250
AdeI	CACNNNGTG	2 cut(s)	2420, 2916
AfaI	GTAC	2 cut(s)	25, 2366
AfiI	CCNNNNNNNGG	5 cut(s)	223, 390, 1712, 2680, 3410
AgeI	ACCGGT	1 cut(s)	690
AjnI	CCWGG	8 cut(s)	137, 511, 1114, 1337, 1505, 1615, 1810, 2091
AjuI	GAANNNNNNNTTGG	6 cut(s)	527, 559, 1021, 1053, 1871, 1903
AloI	GAACNNNNNNTCC	2 cut(s)	2524, 2556
Alw21I	GWGCWC	5 cut(s)	195, 310, 1255, 2425, 3013
Alw26I	GTCTC	5 cut(s)	1531, 1800, 2093, 2511, 3313
Alw44I	GTGCAC	2 cut(s)	191, 1251
AlwNI	CAGNNNCTG	3 cut(s)	2196, 2549, 3273
Ama87I	CYCGRG	1 cut(s)	389
ApaI	GGGCCC	1 cut(s)	2099
ApaLI	GTGCAC	2 cut(s)	191, 1251
ApeKI	GCWGC	6 cut(s)	848, 1000, 1283, 2196, 2443, 3020
ApoI	RAATTY	2 cut(s)	3113, 3440
ArsI	GACNNNNNNTTYG	2 cut(s)	2878, 2910
AseI	ATTAAT	1 cut(s)	1458
AsiGI	ACCGGT	1 cut(s)	690
AspS9I	GGNCC	8 cut(s)	741, 1306, 1839, 1883, 2095, 2096, 2671, 3003
AsuC2I	CCSGG	5 cut(s)	390, 391, 1099, 2393, 2418
AsuII	TTCGAA	1 cut(s)	3438
AsuNHI	GCTAGC	1 cut(s)	2728
AvaI	CYCGRG	1 cut(s)	389
AvaII	GGWCC	4 cut(s)	741, 1306, 2671, 3003
BaeGI	GKGCMC	4 cut(s)	195, 1028, 1255, 2099
BalI	TGGCCA	1 cut(s)	1615
BamHI	GGATCC	2 cut(s)	226, 1372
BanI	GGYRCC	1 cut(s)	362
BanII	GRGCYC	4 cut(s)	310, 863, 2080, 2099
BarI	GAAGNNNNNNTAC	2 cut(s)	2008, 2040
BauI	CACGAG	3 cut(s)	303, 1797, 2436
BbsI	GAAGAC	1 cut(s)	2505
Bbv12I	GWGCWC	5 cut(s)	195, 310, 1255, 2425, 3013
BbvI	GCAGC	6 cut(s)	860, 987, 1295, 2183, 2430, 3007
BceAI	ACGGC	1 cut(s)	1302
BciT130I	CCWGG	8 cut(s)	139, 513, 1116, 1339, 1507, 1617, 1812, 2093
BclI	TGATCA	3 cut(s)	682, 1819, 1909
BcnI	CCSGG	5 cut(s)	390, 391, 1099, 2393, 2418
BcoDI	GTCTC	5 cut(s)	1531, 1800, 2093, 2511, 3313
BfaI	CTAG	8 cut(s)	1196, 1287, 1650, 1695, 1740, 2205, 2729, 2960
BfmI	CTRYAG	8 cut(s)	87, 846, 865, 1041, 1140, 1728, 2460, 2685
BfuAI	ACCTGC	1 cut(s)	853
BglII	AGATCT	1 cut(s)	1045
BisI	GCNGC	8 cut(s)	103, 849, 1001, 1284, 1808, 2197, 2444, 3021
BlpI	GCTNAGC	1 cut(s)	1641
BlsI	GCNGC	8 cut(s)	104, 850, 1002, 1285, 1809, 2198, 2445, 3022
Bme18I	GGWCC	4 cut(s)	741, 1306, 2671, 3003
BmeT110I	CYCGRG	1 cut(s)	389
BmgT120I	GGNCC	8 cut(s)	741, 1306, 1839, 1883, 2095, 2096, 2671, 3003
BmrI	ACTGGG	2 cut(s)	291, 2093
BmtI	GCTAGC	1 cut(s)	2732
BmuI	ACTGGG	2 cut(s)	291, 2093
BpiI	GAAGAC	1 cut(s)	2505
BpmI	CTGGAG	2 cut(s)	121, 2075
Bpu1102I	GCTNAGC	1 cut(s)	1641
Bpu14I	TTCGAA	1 cut(s)	3438
BpuEI	CTTGAG	3 cut(s)	1078, 2284, 2954
BpuMI	CCSGG	5 cut(s)	390, 391, 1099, 2393, 2418
Bsa29I	ATCGAT	1 cut(s)	2032
BsaBI	GATNNNNATC	4 cut(s)	681, 1497, 2593, 3062
BsaI	GGTCTC	2 cut(s)	2093, 2511
BsaWI	WCCGGW	2 cut(s)	116, 690
BsaXI	ACNNNNNCTCC	6 cut(s)	608, 638, 1934, 1964, 2508, 2538
Bsc4I	CCNNNNNNNGG	5 cut(s)	223, 390, 1712, 2680, 3410
Bse118I	RCCGGY	2 cut(s)	690, 1977
Bse1I	ACTGG	8 cut(s)	286, 676, 1616, 2099, 2119, 2354, 2569, 3006
Bse3DI	GCAATG	6 cut(s)	564, 569, 951, 1706, 1941, 3363
Bse8I	GATNNNNATC	4 cut(s)	681, 1497, 2593, 3062
BseBI	CCWGG	8 cut(s)	139, 513, 1116, 1339, 1507, 1617, 1812, 2093
BseCI	ATCGAT	1 cut(s)	2032
BseJI	GATNNNNATC	4 cut(s)	681, 1497, 2593, 3062
BseLI	CCNNNNNNNGG	5 cut(s)	223, 390, 1712, 2680, 3410
BseMI	GCAATG	6 cut(s)	564, 569, 951, 1706, 1941, 3363
BseMII	CTCAG	8 cut(s)	365, 786, 1461, 1632, 1943, 2244, 2499, 2706
BseNI	ACTGG	8 cut(s)	286, 676, 1616, 2099, 2119, 2354, 2569, 3006
BseRI	GAGGAG	4 cut(s)	103, 634, 676, 2148
BseSI	GKGCMC	4 cut(s)	195, 1028, 1255, 2099
BseX3I	CGGCCG	1 cut(s)	100
BseXI	GCAGC	6 cut(s)	860, 987, 1295, 2183, 2430, 3007
BsgI	GTGCAG	3 cut(s)	2622, 2814, 2882
Bsh1236I	CGCG	1 cut(s)	423
Bsh1285I	CGRYCG	3 cut(s)	103, 121, 2165
BshNI	GGYRCC	1 cut(s)	362
BshTI	ACCGGT	1 cut(s)	690
BshVI	ATCGAT	1 cut(s)	2032
BsiEI	CGRYCG	3 cut(s)	103, 121, 2165
BsiHKAI	GWGCWC	5 cut(s)	195, 310, 1255, 2425, 3013
BsiHKCI	CYCGRG	1 cut(s)	389
BsiSI	CCGG	7 cut(s)	117, 390, 691, 1098, 1978, 2393, 2418
BslFI	GGGAC	5 cut(s)	1292, 1633, 2851, 3016, 3372
BslI	CCNNNNNNNGG	5 cut(s)	223, 390, 1712, 2680, 3410
BsmAI	GTCTC	5 cut(s)	1531, 1800, 2093, 2511, 3313
BsmBI	CGTCTC	1 cut(s)	3313
BsmFI	GGGAC	5 cut(s)	1292, 1633, 2851, 3016, 3372
BsmI	GAATGC	4 cut(s)	736, 1645, 1852, 2580
Bso31I	GGTCTC	2 cut(s)	2093, 2511
BsoBI	CYCGRG	1 cut(s)	389
Bsp119I	TTCGAA	1 cut(s)	3438
Bsp120I	GGGCCC	1 cut(s)	2095
Bsp1286I	GDGCHC	9 cut(s)	195, 310, 863, 1028, 1255, 2080, 2099, 2425, 3013
Bsp1720I	GCTNAGC	1 cut(s)	1641
Bsp19I	CCATGG	3 cut(s)	222, 812, 1272
BspACI	CCGC	9 cut(s)	103, 423, 578, 1771, 1807, 2074, 2713, 3233, 3410
BspCNI	CTCAG	8 cut(s)	364, 787, 1462, 1633, 1942, 2243, 2500, 2705
BspDI	ATCGAT	1 cut(s)	2032
BspFNI	CGCG	1 cut(s)	423
BspHI	TCATGA	3 cut(s)	408, 1956, 3171
BspMAI	CTGCAG	2 cut(s)	850, 1144
BspMI	ACCTGC	1 cut(s)	853
BspOI	GCTAGC	1 cut(s)	2732
BspQI	GCTCTTC	2 cut(s)	246, 2846
BspT104I	TTCGAA	1 cut(s)	3438
BspT107I	GGYRCC	1 cut(s)	362
BspTNI	GGTCTC	2 cut(s)	2093, 2511
BsrDI	GCAATG	6 cut(s)	564, 569, 951, 1706, 1941, 3363
BsrFI	RCCGGY	2 cut(s)	690, 1977
BsrI	ACTGG	8 cut(s)	286, 676, 1616, 2099, 2119, 2354, 2569, 3006
BssAI	RCCGGY	2 cut(s)	690, 1977
BssSI	CACGAG	3 cut(s)	303, 1797, 2436
BssT1I	CCWWGG	7 cut(s)	222, 744, 812, 898, 1272, 2179, 2368
Bst2BI	CACGAG	3 cut(s)	303, 1797, 2436
Bst2UI	CCWGG	8 cut(s)	139, 513, 1116, 1339, 1507, 1617, 1812, 2093
Bst4CI	ACNGT	8 cut(s)	91, 190, 296, 1907, 2053, 2461, 2522, 2606
Bst6I	CTCTTC	7 cut(s)	246, 1361, 1639, 2283, 2846, 2958, 3387
BstAPI	GCANNNNNTGC	1 cut(s)	2196
BstBI	TTCGAA	1 cut(s)	3438
BstC8I	GCNNGC	7 cut(s)	74, 1228, 2076, 2226, 2730, 2734, 2925
BstDSI	CCRYGG	3 cut(s)	222, 812, 1272
BstEII	GGTNACC	1 cut(s)	1973
BstFNI	CGCG	1 cut(s)	423
BstMAI	GTCTC	5 cut(s)	1531, 1800, 2093, 2511, 3313
BstMCI	CGRYCG	3 cut(s)	103, 121, 2165
BstNI	CCWGG	8 cut(s)	139, 513, 1116, 1339, 1507, 1617, 1812, 2093
BstNSI	RCATGY	2 cut(s)	1328, 2228
BstPI	GGTNACC	1 cut(s)	1973
BstSFI	CTRYAG	8 cut(s)	87, 846, 865, 1041, 1140, 1728, 2460, 2685
BstSLI	GKGCMC	4 cut(s)	195, 1028, 1255, 2099
BstUI	CGCG	1 cut(s)	423
BstV1I	GCAGC	6 cut(s)	860, 987, 1295, 2183, 2430, 3007
BstV2I	GAAGAC	1 cut(s)	2505
BstX2I	RGATCY	4 cut(s)	226, 1045, 1144, 1372
BstXI	CCANNNNNNTGG	1 cut(s)	1623
BstYI	RGATCY	4 cut(s)	226, 1045, 1144, 1372
BstZI	CGGCCG	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	2032
BsuTUI	ATCGAT	1 cut(s)	2032
BtgI	CCRYGG	3 cut(s)	222, 812, 1272
BtsI	GCAGTG	2 cut(s)	1137, 3242
BveI	ACCTGC	1 cut(s)	853
Cac8I	GCNNGC	7 cut(s)	74, 1228, 2076, 2226, 2730, 2734, 2925
CaiI	CAGNNNCTG	3 cut(s)	2196, 2549, 3273
CciI	TCATGA	3 cut(s)	408, 1956, 3171
Cfr10I	RCCGGY	2 cut(s)	690, 1977
Cfr13I	GGNCC	8 cut(s)	741, 1306, 1839, 1883, 2095, 2096, 2671, 3003
Cfr9I	CCCGGG	1 cut(s)	389
ClaI	ATCGAT	1 cut(s)	2032
Csp6I	GTAC	2 cut(s)	24, 2365
CspAI	ACCGGT	1 cut(s)	690
CspCI	CAANNNNNGTGG	2 cut(s)	2337, 2372
CviQI	GTAC	2 cut(s)	24, 2365
DraIII	CACNNNGTG	2 cut(s)	2420, 2916
EaeI	YGGCCR	4 cut(s)	100, 1275, 1613, 1808
EagI	CGGCCG	1 cut(s)	100
Eam1104I	CTCTTC	7 cut(s)	246, 1361, 1639, 2283, 2846, 2958, 3387
EarI	CTCTTC	7 cut(s)	246, 1361, 1639, 2283, 2846, 2958, 3387
EciI	GGCGGA	1 cut(s)	1760
Ecl136II	GAGCTC	1 cut(s)	308
EclXI	CGGCCG	1 cut(s)	100
Eco130I	CCWWGG	7 cut(s)	222, 744, 812, 898, 1272, 2179, 2368
Eco147I	AGGCCT	1 cut(s)	820
Eco24I	GRGCYC	4 cut(s)	310, 863, 2080, 2099
Eco31I	GGTCTC	2 cut(s)	2093, 2511
Eco32I	GATATC	2 cut(s)	1126, 1768
Eco47I	GGWCC	4 cut(s)	741, 1306, 2671, 3003
Eco52I	CGGCCG	1 cut(s)	100
Eco53kI	GAGCTC	1 cut(s)	308
Eco57I	CTGAAG	6 cut(s)	1342, 1517, 1620, 2268, 2571, 3250
Eco88I	CYCGRG	1 cut(s)	389
Eco91I	GGTNACC	1 cut(s)	1973
EcoICRI	GAGCTC	1 cut(s)	308
EcoO109I	RGGNCCY	3 cut(s)	1306, 2095, 2671
EcoO65I	GGTNACC	1 cut(s)	1973
EcoRII	CCWGG	8 cut(s)	137, 511, 1114, 1337, 1505, 1615, 1810, 2091
EcoRV	GATATC	2 cut(s)	1126, 1768
EcoT14I	CCWWGG	7 cut(s)	222, 744, 812, 898, 1272, 2179, 2368
EcoT22I	ATGCAT	1 cut(s)	2455
EcoT38I	GRGCYC	4 cut(s)	310, 863, 2080, 2099
ErhI	CCWWGG	7 cut(s)	222, 744, 812, 898, 1272, 2179, 2368
Esp3I	CGTCTC	1 cut(s)	3313
FaqI	GGGAC	5 cut(s)	1292, 1633, 2851, 3016, 3372
FauI	CCCGC	4 cut(s)	416, 2067, 2720, 3403
FbaI	TGATCA	3 cut(s)	682, 1819, 1909
FblI	GTMKAC	1 cut(s)	2814
Fnu4HI	GCNGC	8 cut(s)	103, 849, 1001, 1284, 1808, 2197, 2444, 3021
FriOI	GRGCYC	4 cut(s)	310, 863, 2080, 2099
Fsp4HI	GCNGC	8 cut(s)	103, 849, 1001, 1284, 1808, 2197, 2444, 3021
FspBI	CTAG	8 cut(s)	1196, 1287, 1650, 1695, 1740, 2205, 2729, 2960
GluI	GCNGC	8 cut(s)	103, 849, 1001, 1284, 1808, 2197, 2444, 3021
GsuI	CTGGAG	2 cut(s)	121, 2075
HapII	CCGG	7 cut(s)	117, 390, 691, 1098, 1978, 2393, 2418
HincII	GTYRAC	3 cut(s)	642, 1629, 3181
HindII	GTYRAC	3 cut(s)	642, 1629, 3181
HindIII	AAGCTT	2 cut(s)	1529, 2747
HpaII	CCGG	7 cut(s)	117, 390, 691, 1098, 1978, 2393, 2418
Hpy166II	GTNNAC	9 cut(s)	193, 642, 1137, 1253, 1322, 1629, 2602, 2815, 3181
Hpy8I	GTNNAC	9 cut(s)	193, 642, 1137, 1253, 1322, 1629, 2602, 2815, 3181
Hpy99I	CGWCG	1 cut(s)	1485
HpyAV	CCTTC	7 cut(s)	238, 1321, 1413, 1784, 1825, 2034, 2800
HpyCH4III	ACNGT	8 cut(s)	91, 190, 296, 1907, 2053, 2461, 2522, 2606
HpyCH4IV	ACGT	3 cut(s)	1429, 1480, 2617
HpySE526I	ACGT	3 cut(s)	1429, 1480, 2617
KflI	GGGWCCC	1 cut(s)	1306
Ksp22I	TGATCA	3 cut(s)	682, 1819, 1909
LguI	GCTCTTC	2 cut(s)	246, 2846
LmnI	GCTCC	2 cut(s)	1715, 3240
Lsp1109I	GCAGC	6 cut(s)	860, 987, 1295, 2183, 2430, 3007
MaeI	CTAG	8 cut(s)	1196, 1287, 1650, 1695, 1740, 2205, 2729, 2960
MaeII	ACGT	3 cut(s)	1429, 1480, 2617
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	4 cut(s)	226, 1045, 1144, 1372
MhlI	GDGCHC	9 cut(s)	195, 310, 863, 1028, 1255, 2080, 2099, 2425, 3013
MlsI	TGGCCA	1 cut(s)	1615
MluCI	AATT	9 cut(s)	81, 159, 833, 966, 2133, 2349, 3113, 3186, 3440
MluNI	TGGCCA	1 cut(s)	1615
MlyI	GAGTC	5 cut(s)	673, 1481, 1737, 2339, 3354
MmeI	TCCRAC	4 cut(s)	227, 2089, 2506, 3181
Mox20I	TGGCCA	1 cut(s)	1615
Mph1103I	ATGCAT	1 cut(s)	2455
MscI	TGGCCA	1 cut(s)	1615
MseI	TTAA	7 cut(s)	836, 1050, 1259, 1407, 1458, 1685, 3185
Msp20I	TGGCCA	1 cut(s)	1615
MspA1I	CMGCKG	1 cut(s)	1640
MspI	CCGG	7 cut(s)	117, 390, 691, 1098, 1978, 2393, 2418
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	4 cut(s)	736, 1645, 1852, 2580
MvaI	CCWGG	8 cut(s)	139, 513, 1116, 1339, 1507, 1617, 1812, 2093
MvnI	CGCG	1 cut(s)	423
NciI	CCSGG	5 cut(s)	390, 391, 1099, 2393, 2418
NcoI	CCATGG	3 cut(s)	222, 812, 1272
NheI	GCTAGC	1 cut(s)	2728
NmeAIII	GCCGAG	1 cut(s)	48
NsiI	ATGCAT	1 cut(s)	2455
NspI	RCATGY	2 cut(s)	1328, 2228
NspV	TTCGAA	1 cut(s)	3438
PaeI	GCATGC	1 cut(s)	2228
PagI	TCATGA	3 cut(s)	408, 1956, 3171
PceI	AGGCCT	1 cut(s)	820
PciSI	GCTCTTC	2 cut(s)	246, 2846
PctI	GAATGC	4 cut(s)	736, 1645, 1852, 2580
PflFI	GACNNNGTC	1 cut(s)	2522
PflMI	CCANNNNNTGG	2 cut(s)	223, 1712
PfoI	TCCNGGA	1 cut(s)	511
PinAI	ACCGGT	1 cut(s)	690
PkrI	GCNGC	8 cut(s)	104, 850, 1002, 1285, 1809, 2198, 2445, 3022
Ple19I	CGATCG	1 cut(s)	2165
PleI	GAGTC	5 cut(s)	672, 1480, 1737, 2339, 3354
PpsI	GAGTC	5 cut(s)	672, 1480, 1737, 2339, 3354
PpuMI	RGGWCCY	2 cut(s)	1306, 2671
PshBI	ATTAAT	1 cut(s)	1458
Psp124BI	GAGCTC	1 cut(s)	310
Psp5II	RGGWCCY	2 cut(s)	1306, 2671
Psp6I	CCWGG	8 cut(s)	137, 511, 1114, 1337, 1505, 1615, 1810, 2091
PspEI	GGTNACC	1 cut(s)	1973
PspGI	CCWGG	8 cut(s)	137, 511, 1114, 1337, 1505, 1615, 1810, 2091
PspOMI	GGGCCC	1 cut(s)	2095
PspPI	GGNCC	8 cut(s)	741, 1306, 1839, 1883, 2095, 2096, 2671, 3003
PspPPI	RGGWCCY	2 cut(s)	1306, 2671
PstI	CTGCAG	2 cut(s)	850, 1144
PstNI	CAGNNNCTG	3 cut(s)	2196, 2549, 3273
PsuI	RGATCY	4 cut(s)	226, 1045, 1144, 1372
PsyI	GACNNNGTC	1 cut(s)	2522
PvuI	CGATCG	1 cut(s)	2165
PvuII	CAGCTG	1 cut(s)	1640
RsaI	GTAC	2 cut(s)	25, 2366
RsaNI	GTAC	2 cut(s)	24, 2365
SacI	GAGCTC	1 cut(s)	310
SapI	GCTCTTC	2 cut(s)	246, 2846
SaqAI	TTAA	7 cut(s)	836, 1050, 1259, 1407, 1458, 1685, 3185
SatI	GCNGC	8 cut(s)	103, 849, 1001, 1284, 1808, 2197, 2444, 3021
Sau96I	GGNCC	8 cut(s)	741, 1306, 1839, 1883, 2095, 2096, 2671, 3003
SchI	GAGTC	5 cut(s)	673, 1481, 1737, 2339, 3354
SduI	GDGCHC	9 cut(s)	195, 310, 863, 1028, 1255, 2080, 2099, 2425, 3013
SfcI	CTRYAG	8 cut(s)	87, 846, 865, 1041, 1140, 1728, 2460, 2685
SfuI	TTCGAA	1 cut(s)	3438
SinI	GGWCC	4 cut(s)	741, 1306, 2671, 3003
SmaI	CCCGGG	1 cut(s)	391
SmlI	CTYRAG	3 cut(s)	1057, 2263, 2933
SmoI	CTYRAG	3 cut(s)	1057, 2263, 2933
SphI	GCATGC	1 cut(s)	2228
Sse9I	AATT	9 cut(s)	81, 159, 833, 966, 2133, 2349, 3113, 3186, 3440
SseBI	AGGCCT	1 cut(s)	820
SsiI	CCGC	9 cut(s)	103, 423, 578, 1771, 1807, 2074, 2713, 3233, 3410
SspI	AATATT	1 cut(s)	879
SspMI	CTAG	8 cut(s)	1196, 1287, 1650, 1695, 1740, 2205, 2729, 2960
SstI	GAGCTC	1 cut(s)	310
StuI	AGGCCT	1 cut(s)	820
StyI	CCWWGG	7 cut(s)	222, 744, 812, 898, 1272, 2179, 2368
TaaI	ACNGT	8 cut(s)	91, 190, 296, 1907, 2053, 2461, 2522, 2606
TaiI	ACGT	3 cut(s)	1432, 1483, 2620
TasI	AATT	9 cut(s)	81, 159, 833, 966, 2133, 2349, 3113, 3186, 3440
TauI	GCSGC	2 cut(s)	105, 1810
Tru1I	TTAA	7 cut(s)	836, 1050, 1259, 1407, 1458, 1685, 3185
Tru9I	TTAA	7 cut(s)	836, 1050, 1259, 1407, 1458, 1685, 3185
TseI	GCWGC	6 cut(s)	848, 1000, 1283, 2196, 2443, 3020
TspGWI	ACGGA	2 cut(s)	875, 2666
TspMI	CCCGGG	1 cut(s)	389
Tth111I	GACNNNGTC	1 cut(s)	2522
Van91I	CCANNNNNTGG	2 cut(s)	223, 1712
VneI	GTGCAC	2 cut(s)	191, 1251
VpaK11BI	GGWCC	4 cut(s)	741, 1306, 2671, 3003
VspI	ATTAAT	1 cut(s)	1458
XapI	RAATTY	2 cut(s)	3113, 3440
XceI	RCATGY	2 cut(s)	1328, 2228
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3310
XmaI	CCCGGG	1 cut(s)	389
XmiI	GTMKAC	1 cut(s)	2814
XspI	CTAG	8 cut(s)	1196, 1287, 1650, 1695, 1740, 2205, 2729, 2960
Zsp2I	ATGCAT	1 cut(s)	2455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.