AT5G18590

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010980
Physical Location & Seq
Reverse (-)
6178354 .. 6182761
4408 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G18590.2

Sequence Viewer

Length: 2127 bp
ATGTTCAGCTTTTCAAAGAGGCGCATGAGACTTGGCAGAGTTAAGAAGGTACAGCTCTCGGATTCTGTTCAAGGATATAAGAGTCCTTTACGAGTGACCAAACGCGCTGATAGCTCTAGTAATGAAGCTGCTGTTGCTGCAACTAGTTATTCTGATGAACTTGATTTCCAGCCTTCATCAGGGAATTCCGAAAATTGGATGGTGTTATCGGTTAATGGCGAAAAACCCGCTCCACGCTTTAATCATGCAGCGGCGACTATTGGGAACAAAATGATAGTAGTTGGTGGAGAGTCTGGTAGTGGCTTGTTGGATGATGTACAGGTGCTTAACTTTGATTCATGTACATGGTCCACCGCATCTTCAAAAGTTTACTTATCGCCGAGTAGTCTTCCTCTCATGATCCCTGCTTGGAAAGGCCATTGCTTGGTCTCTTGGGGTAAAAAAGTGCTGTTGGTGGGTGGAAAAACAGATCCTAGCAGTGATAGAGTTTCAGTGTGGGCATTTGATACTGATTCGGAATGCTGGTCACTAATGGATGCAAAAGGAGACTTACCGGTCAGTCGCAGCGGTCACACAGTGGTGAGGGCTAGTTCGGTATTGATACTATTCGGTGGTGAAGACTCTAAGAAGAGGAAACTAAACGATCTTCATATGTTTGATCTCAAATCATCCACATGGCTTCCTCTTAATTGCACAGGAACACGGCCGTGTGCAAGGTCACATCATGTAGCCACGTTATTCGACGACAAAATTCTGTTTGTGTTTGGAGGTTCGGGCAAGAACAAAACACTAAATGACTTATACTCACTCGACTTTGAAACGATGGTATGGTCAAGAATAAAGATAAGAGGATTTCACCCATCACCAAGAGCGGGTAGTTGTGGAGTTCTTTGCGGTACTAAATGGTATATAACCGGAGGAGGAAGCAGAAAGAAGAGACATGCGGAAACATTGGTCTTCGATATCCTTAAGGTCGAGTGGTCTGTAGCAAGCATCTCCTCTCAATCTTCTGTCACATCCAACAAGGGATTTAGTCTAGTTCTTCTGCAACACAAGGATAAAGATTTCCTTGTAGCTTTTGGAGGAACGAAAAAAGATCCTTCAAATCAGGTCGATGCTTTTACCATTGACAAGAACAAGAGTGAATCACCAACACATCCGCAAACAACTTCCAAGAAAAACCCCGGCCGGTTACTGTTTGGAAAAAGATCTTCTTCCTCGGCAGTTTTAACCTCTGATGAATCGGTTAAAGCCTCTTCACAGAGGCTGATTGATTCAGTTGCCAGACAGAAACTTGCTTCAGCCATTGAAGAGCATGGTGGCTCTGGTAGAAGGTCTTTATCAGAGATTGCTTTCGGTGATCATCGTAACCCACCTTCTGGAAATGTCTCTTTGCGTAAACAGTTTAGCACCGAAGAGGAATACAGAGCGGTGATTGAACCCGCAAAGTGTTCAGAAGAAGACATTTCCGTGCCTCCTCCGACCACAGATGACAATACTGGAGGAGCAAAGATTACAGCAGAGAAAACACTTTCTATGGTTTCTGACCGTGAAATCTTAAGTCTCCAGAAGCAATGCTCTGAAACATATCCTTTAGAAAACGTTGATGGCGCCTTGATATTCCAAGAAATGGATAATATCAACTTTGCAGGATCAGCGTCCTCATCGAGCGTGTACCAATTCCATGAAGCGAAAATGACGGCTCTTATAAGAAGAAATGGGATTCTGGAAGGGCAGTTAGAAGCAGCATTGGCGGGAAGAGAGGCGGCTGAGAGGAATGTGTCGGTTGCGTTGAGGAGCAAACAAGAGACTGATAAAAAGTTATCTGACGCCATGAGAGATGTTGAATTGCTTAAGGAGAAGCTGACCGGGTTAGAGCTCGCTCAAGAGGAAGCTAATAGTTTGTCAAACATGGTTCACTCCGACAATGTCAGGCTTGAGCATGATGTAGCGTTCCTCAAAGCTGTCCTAGACGATACACAAAAGGAGTTGCATTCAACAAGAGGAGTTCTTGCAGGAGAAAGAGCAAGAGCGTTCCAGTTGCAGGTTGAAGTGTTTCATCTGAAGCAAAGATTACAATCTCTAGAGAACAGAGCTGCTACACCCAGAAAGCCTTTCCATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_1 Kelch_4 Kelch_5

Protein Analysis

708

Amino Acids

77.64

Weight (kDa)

8.87

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 62 - 121 8.4e-12 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 62 - 124 3.6e-06 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 63 - 122 1.5e-09 FBX42, beta-propeller domain
Kelch_1 PF01344 78 - 121 3.2e-08 Kelch motif
Beta-prop_FBX42 PF13415 138 - 260 1.3e-23 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 139 - 362 2e-59 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_TYW4 PF13418 140 - 361 1.6e-13 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 151 - 291 1.9e-21 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 171 - 257 4e-11 Host cell factor, Kelch-repeats domain
Beta-prop_TYW4 PF13418 185 - 401 3.7e-09 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_FBX42 PF13415 246 - 389 1e-17 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 252 - 385 2.7e-12 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 252 - 329 1.7e-07 Host cell factor, Kelch-repeats domain
ACBP4_C PF24922 626 - 696 4.2e-09 Acyl-CoA-binding domain-containing protein 4-6, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18590 AT5G18590
fragaria_vesca FvH4_4g17510 FvH4_4g17510 FvH4_4g17510
malus_domestica MD16G1173400.v1.1
prunus_persica Prupe.1G140300_v2.0.a1 Prupe.1G140300_v2.0.a1
pyrus_communis pycom16g14540
rosa_chinensis RchiOBHm_Chr4g0421431
rosa_laevigata RLG00000007685
rosa_multiflora Rmu_sc0001962.1_g000012
rosa_roxburghii Rroxscaffold_5G00363700
rosa_rugosa Rorug04G0171000 Rorug04G0171100
rosa_samantha Rh4AG231800 Rh4BG234700 Rh4CG246300 Rh4DG230300
rosa_wichuraiana Rw4G020230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1709
AasI GACNNNNNNGTC 1 cut(s) 554
Acc36I ACCTGC 1 cut(s) 2035
AccB1I GGYRCC 1 cut(s) 1610
AccB7I CCANNNNNTGG 3 cut(s) 424, 1379, 1630
AccBSI CCGCTC 3 cut(s) 230, 872, 1430
AccII CGCG 1 cut(s) 105
AclI AACGTT 1 cut(s) 1602
AclWI GGATC 4 cut(s) 394, 464, 1091, 1660
AcoI YGGCCR 2 cut(s) 704, 1186
AcsI RAATTY 2 cut(s) 184, 750
AcuI CTGAAG 2 cut(s) 1284, 2084
AcyI GRCGYC 2 cut(s) 1611, 1830
AdeI CACNNNGTG 1 cut(s) 577
AfaI GTAC 5 cut(s) 51, 318, 343, 898, 1676
AfiI CCNNNNNNNGG 7 cut(s) 179, 195, 424, 872, 1379, 1630, 2044
AflII CTTAAG 3 cut(s) 968, 1558, 1853
AgeI ACCGGT 1 cut(s) 553
AhlI ACTAGT 1 cut(s) 143
AleI CACNNNNGTG 2 cut(s) 578, 706
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
Alw21I GWGCWC 1 cut(s) 1881
Alw26I GTCTC 7 cut(s) 22, 433, 540, 931, 1393, 1568, 1802
AlwI GGATC 4 cut(s) 394, 464, 1091, 1660
AlwNI CAGNNNCTG 1 cut(s) 1267
AoxI GGCC 3 cut(s) 415, 704, 1186
ApeKI GCWGC 6 cut(s) 128, 137, 248, 564, 1745, 2096
ApoI RAATTY 2 cut(s) 184, 750
AsiGI ACCGGT 1 cut(s) 553
Asp700I GAANNNNTTC 1 cut(s) 2055
AspLEI GCGC 3 cut(s) 24, 107, 1613
AspS9I GGNCC 1 cut(s) 348
AsuC2I CCSGG 2 cut(s) 1185, 1870
AsuHPI GGTGA 7 cut(s) 592, 626, 848, 855, 1140, 1370, 1444
AvaII GGWCC 1 cut(s) 348
BanI GGYRCC 1 cut(s) 1610
BanII GRGCYC 1 cut(s) 1881
BarI GAAGNNNNNNTAC 2 cut(s) 1360, 1392
BbsI GAAGAC 4 cut(s) 380, 624, 949, 1467
Bbv12I GWGCWC 1 cut(s) 1881
BbvI GCAGC 6 cut(s) 115, 124, 260, 576, 1757, 2083
BccI CCATC 4 cut(s) 193, 817, 868, 1601
BceAI ACGGC 3 cut(s) 691, 719, 1716
BclI TGATCA 1 cut(s) 1360
BcnI CCSGG 2 cut(s) 1185, 1870
BcoDI GTCTC 7 cut(s) 22, 433, 540, 931, 1393, 1568, 1802
BcuI ACTAGT 1 cut(s) 143
BfaI CTAG 7 cut(s) 117, 144, 474, 588, 1037, 1970, 2084
BfmI CTRYAG 1 cut(s) 984
BfoI RGCGCY 1 cut(s) 1614
BfrI CTTAAG 3 cut(s) 968, 1558, 1853
BfuAI ACCTGC 1 cut(s) 2035
BglII AGATCT 1 cut(s) 1208
BisI GCNGC 8 cut(s) 129, 138, 249, 252, 565, 1746, 1767, 2097
BlsI GCNGC 8 cut(s) 130, 139, 250, 253, 566, 1747, 1768, 2098
Bme1390I CCNGG 2 cut(s) 1185, 1870
Bme18I GGWCC 1 cut(s) 348
BmgT120I GGNCC 1 cut(s) 348
BmiI GGNNCC 1 cut(s) 1612
BmrFI CCNGG 2 cut(s) 1185, 1870
BmsI GCATC 4 cut(s) 365, 526, 1002, 1105
BpiI GAAGAC 4 cut(s) 380, 624, 949, 1467
BpmI CTGGAG 2 cut(s) 1521, 1550
BpuEI CTTGAG 2 cut(s) 1869, 1958
BpuMI CCSGG 2 cut(s) 1185, 1870
BsaBI GATNNNNATC 1 cut(s) 2077
BsaHI GRCGYC 2 cut(s) 1611, 1830
BsaI GGTCTC 1 cut(s) 433
BsaJI CCNNGG 2 cut(s) 1183, 1218
BsaWI WCCGGW 2 cut(s) 553, 914
Bsc4I CCNNNNNNNGG 7 cut(s) 179, 195, 424, 872, 1379, 1630, 2044
Bse118I RCCGGY 2 cut(s) 553, 1188
Bse1I ACTGG 2 cut(s) 1504, 2038
Bse3DI GCAATG 2 cut(s) 418, 1580
Bse8I GATNNNNATC 1 cut(s) 2077
BseDI CCNNGG 2 cut(s) 1183, 1218
BseGI GGATG 6 cut(s) 204, 316, 541, 668, 1016, 1156
BseJI GATNNNNATC 1 cut(s) 2077
BseLI CCNNNNNNNGG 7 cut(s) 179, 195, 424, 872, 1379, 1630, 2044
BseMI GCAATG 2 cut(s) 418, 1580
BseMII CTCAG 1 cut(s) 1761
BseNI ACTGG 2 cut(s) 1504, 2038
BseRI GAGGAG 6 cut(s) 933, 988, 1467, 1518, 1810, 2019
BseX3I CGGCCG 2 cut(s) 704, 1186
BseXI GCAGC 6 cut(s) 115, 124, 260, 576, 1757, 2083
Bsh1236I CGCG 1 cut(s) 105
Bsh1285I CGRYCG 2 cut(s) 707, 1189
BshFI GGCC 3 cut(s) 417, 706, 1188
BshNI GGYRCC 1 cut(s) 1610
BshTI ACCGGT 1 cut(s) 553
BsiEI CGRYCG 2 cut(s) 707, 1189
BsiHKAI GWGCWC 1 cut(s) 1881
BsiSI CCGG 5 cut(s) 554, 915, 1185, 1189, 1869
BslI CCNNNNNNNGG 7 cut(s) 179, 195, 424, 872, 1379, 1630, 2044
BsmAI GTCTC 7 cut(s) 22, 433, 540, 931, 1393, 1568, 1802
BsmI GAATGC 2 cut(s) 524, 1993
BsnI GGCC 3 cut(s) 417, 706, 1188
Bso31I GGTCTC 1 cut(s) 433
Bsp1286I GDGCHC 1 cut(s) 1881
Bsp1407I TGTACA 2 cut(s) 316, 341
Bsp143I GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
BspANI GGCC 3 cut(s) 417, 706, 1188
BspCNI CTCAG 1 cut(s) 1762
BspFNI CGCG 1 cut(s) 105
BspHI TCATGA 1 cut(s) 396
BspLI GGNNCC 1 cut(s) 1612
BspMI ACCTGC 1 cut(s) 2035
BspPI GGATC 4 cut(s) 394, 464, 1091, 1660
BspQI GCTCTTC 1 cut(s) 1305
BspT107I GGYRCC 1 cut(s) 1610
BspTI CTTAAG 3 cut(s) 968, 1558, 1853
BspTNI GGTCTC 1 cut(s) 433
BsrBI CCGCTC 3 cut(s) 230, 872, 1430
BsrDI GCAATG 2 cut(s) 418, 1580
BsrFI RCCGGY 2 cut(s) 553, 1188
BsrGI TGTACA 2 cut(s) 316, 341
BsrI ACTGG 2 cut(s) 1504, 2038
BssAI RCCGGY 2 cut(s) 553, 1188
BssECI CCNNGG 2 cut(s) 1183, 1218
BssMI GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
BssNI GRCGYC 2 cut(s) 1611, 1830
Bst4CI ACNGT 4 cut(s) 577, 1197, 1404, 1550
Bst6I CTCTTC 6 cut(s) 623, 929, 1261, 1305, 1410, 1753
BstACI GRCGYC 2 cut(s) 1611, 1830
BstAFI CTTAAG 3 cut(s) 968, 1558, 1853
BstAUI TGTACA 2 cut(s) 316, 341
BstC8I GCNNGC 2 cut(s) 991, 1881
BstDEI CTNAG 2 cut(s) 624, 1770
BstENI CCTNNNNNAGG 1 cut(s) 177
BstF5I GGATG 6 cut(s) 204, 316, 541, 668, 1016, 1156
BstFNI CGCG 1 cut(s) 105
BstH2I RGCGCY 1 cut(s) 1614
BstHHI GCGC 3 cut(s) 24, 107, 1613
BstKTI GATC 8 cut(s) 402, 472, 646, 661, 1099, 1211, 1363, 1655
BstMAI GTCTC 7 cut(s) 22, 433, 540, 931, 1393, 1568, 1802
BstMBI GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
BstMCI CGRYCG 2 cut(s) 707, 1189
BstMWI GCNNNNNNNGC 5 cut(s) 111, 134, 137, 1655, 1751
BstNSI RCATGY 1 cut(s) 944
BstSCI CCNGG 2 cut(s) 1183, 1868
BstSFI CTRYAG 1 cut(s) 984
BstUI CGCG 1 cut(s) 105
BstV1I GCAGC 6 cut(s) 115, 124, 260, 576, 1757, 2083
BstV2I GAAGAC 4 cut(s) 380, 624, 949, 1467
BstX2I RGATCY 3 cut(s) 469, 1096, 1208
BstYI RGATCY 3 cut(s) 469, 1096, 1208
BstZI CGGCCG 2 cut(s) 704, 1186
BsuRI GGCC 3 cut(s) 417, 706, 1188
BtsCI GGATG 6 cut(s) 204, 316, 541, 668, 1016, 1156
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 3 cut(s) 484, 498, 582
BveI ACCTGC 1 cut(s) 2035
Cac8I GCNNGC 2 cut(s) 991, 1881
CaiI CAGNNNCTG 1 cut(s) 1267
CciI TCATGA 1 cut(s) 396
CfoI GCGC 3 cut(s) 24, 107, 1613
Cfr10I RCCGGY 2 cut(s) 553, 1188
Cfr13I GGNCC 1 cut(s) 348
CseI GACGC 2 cut(s) 1647, 1838
Csp6I GTAC 5 cut(s) 50, 317, 342, 897, 1675
CspAI ACCGGT 1 cut(s) 553
CviQI GTAC 5 cut(s) 50, 317, 342, 897, 1675
DdeI CTNAG 2 cut(s) 624, 1770
DinI GGCGCC 1 cut(s) 1612
DpnI GATC 8 cut(s) 401, 471, 645, 660, 1098, 1210, 1362, 1654
DpnII GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
DraIII CACNNNGTG 1 cut(s) 577
DrdI GACNNNNNNGTC 1 cut(s) 554
DseDI GACNNNNNNGTC 1 cut(s) 554
EaeI YGGCCR 2 cut(s) 704, 1186
EagI CGGCCG 2 cut(s) 704, 1186
Eam1104I CTCTTC 6 cut(s) 623, 929, 1261, 1305, 1410, 1753
EarI CTCTTC 6 cut(s) 623, 929, 1261, 1305, 1410, 1753
Ecl136II GAGCTC 1 cut(s) 1879
EclXI CGGCCG 2 cut(s) 704, 1186
Eco24I GRGCYC 1 cut(s) 1881
Eco31I GGTCTC 1 cut(s) 433
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 1 cut(s) 348
Eco52I CGGCCG 2 cut(s) 704, 1186
Eco53kI GAGCTC 1 cut(s) 1879
Eco57I CTGAAG 2 cut(s) 1284, 2084
EcoICRI GAGCTC 1 cut(s) 1879
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoRI GAATTC 1 cut(s) 184
EcoRV GATATC 1 cut(s) 964
EcoT38I GRGCYC 1 cut(s) 1881
EgeI GGCGCC 1 cut(s) 1612
EheI GGCGCC 1 cut(s) 1612
FalI AAGNNNNNCTT 4 cut(s) 1053, 1085, 1198, 1230
FauI CCCGC 4 cut(s) 235, 865, 1450, 1747
FauNDI CATATG 1 cut(s) 651
FbaI TGATCA 1 cut(s) 1360
Fnu4HI GCNGC 8 cut(s) 129, 138, 249, 252, 565, 1746, 1767, 2097
FokI GGATG 6 cut(s) 211, 323, 548, 655, 1003, 1143
FriOI GRGCYC 1 cut(s) 1881
Fsp4HI GCNGC 8 cut(s) 129, 138, 249, 252, 565, 1746, 1767, 2097
FspBI CTAG 7 cut(s) 117, 144, 474, 588, 1037, 1970, 2084
GlaI GCGC 3 cut(s) 23, 106, 1612
GluI GCNGC 8 cut(s) 129, 138, 249, 252, 565, 1746, 1767, 2097
GsuI CTGGAG 2 cut(s) 1521, 1550
HaeII RGCGCY 1 cut(s) 1614
HaeIII GGCC 3 cut(s) 417, 706, 1188
HapII CCGG 5 cut(s) 554, 915, 1185, 1189, 1869
HgaI GACGC 2 cut(s) 1647, 1838
HhaI GCGC 3 cut(s) 24, 107, 1613
Hin1I GRCGYC 2 cut(s) 1611, 1830
Hin6I GCGC 3 cut(s) 22, 105, 1611
HinP1I GCGC 3 cut(s) 22, 105, 1611
HpaII CCGG 5 cut(s) 554, 915, 1185, 1189, 1869
HphI GGTGA 7 cut(s) 592, 626, 848, 855, 1140, 1370, 1444
Hpy166II GTNNAC 5 cut(s) 351, 370, 1400, 1675, 1918
Hpy188III TCNNGA 7 cut(s) 397, 834, 1380, 1567, 1727, 1886, 2084
Hpy8I GTNNAC 5 cut(s) 351, 370, 1400, 1675, 1918
Hpy99I CGWCG 1 cut(s) 746
HpyAV CCTTC 6 cut(s) 40, 183, 1110, 1326, 1386, 1724
HpyCH4III ACNGT 4 cut(s) 577, 1197, 1404, 1550
HpyCH4IV ACGT 2 cut(s) 734, 1602
HpyF10VI GCNNNNNNNGC 5 cut(s) 111, 134, 137, 1655, 1751
HpyF3I CTNAG 2 cut(s) 624, 1770
HpySE526I ACGT 2 cut(s) 734, 1602
Hsp92I GRCGYC 2 cut(s) 1611, 1830
HspAI GCGC 3 cut(s) 22, 105, 1611
KasI GGCGCC 1 cut(s) 1610
Ksp22I TGATCA 1 cut(s) 1360
Kzo9I GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
LguI GCTCTTC 1 cut(s) 1305
LmnI GCTCC 3 cut(s) 235, 1505, 1797
Lsp1109I GCAGC 6 cut(s) 115, 124, 260, 576, 1757, 2083
LweI GCATC 4 cut(s) 365, 526, 1002, 1105
MaeI CTAG 7 cut(s) 117, 144, 474, 588, 1037, 1970, 2084
MaeII ACGT 2 cut(s) 734, 1602
MaeIII GTNAC 7 cut(s) 94, 525, 569, 717, 1012, 1191, 1367
MalI GATC 8 cut(s) 401, 471, 645, 660, 1098, 1210, 1362, 1654
MbiI CCGCTC 3 cut(s) 230, 872, 1430
MboI GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
MflI RGATCY 3 cut(s) 469, 1096, 1208
MhlI GDGCHC 1 cut(s) 1881
MluCI AATT 6 cut(s) 184, 193, 688, 750, 1679, 1847
Mly113I GGCGCC 1 cut(s) 1611
MlyI GAGTC 3 cut(s) 91, 299, 614
MmeI TCCRAC 4 cut(s) 288, 1044, 1505, 1947
MroXI GAANNNNTTC 1 cut(s) 2055
MslI CAYNNNNRTG 5 cut(s) 343, 578, 673, 706, 1469
MspA1I CMGCKG 2 cut(s) 251, 567
MspCI CTTAAG 3 cut(s) 968, 1558, 1853
MspI CCGG 5 cut(s) 554, 915, 1185, 1189, 1869
MspR9I CCNGG 2 cut(s) 1185, 1870
Mva1269I GAATGC 2 cut(s) 524, 1993
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 5 cut(s) 111, 134, 137, 1655, 1751
NarI GGCGCC 1 cut(s) 1611
NciI CCSGG 2 cut(s) 1185, 1870
NdeI CATATG 1 cut(s) 651
NdeII GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
NlaIV GGNNCC 1 cut(s) 1612
NmeAIII GCCGAG 2 cut(s) 405, 1199
NmuCI GTSAC 5 cut(s) 94, 525, 569, 717, 1012
NspI RCATGY 1 cut(s) 944
OliI CACNNNNGTG 2 cut(s) 578, 706
PagI TCATGA 1 cut(s) 396
PciSI GCTCTTC 1 cut(s) 1305
PctI GAATGC 2 cut(s) 524, 1993
PdmI GAANNNNTTC 1 cut(s) 2055
PfeI GAWTC 7 cut(s) 62, 335, 512, 1145, 1241, 1274, 1723
PflFI GACNNNGTC 1 cut(s) 1928
PflMI CCANNNNNTGG 3 cut(s) 424, 1379, 1630
PinAI ACCGGT 1 cut(s) 553
PkrI GCNGC 8 cut(s) 130, 139, 250, 253, 566, 1747, 1768, 2098
PleI GAGTC 3 cut(s) 90, 298, 614
PluTI GGCGCC 1 cut(s) 1614
PpsI GAGTC 3 cut(s) 90, 298, 614
PsiI TTATAA 1 cut(s) 1709
Psp124BI GAGCTC 1 cut(s) 1881
Psp1406I AACGTT 1 cut(s) 1602
PspN4I GGNNCC 1 cut(s) 1612
PspPI GGNCC 1 cut(s) 348
PstNI CAGNNNCTG 1 cut(s) 1267
PsuI RGATCY 3 cut(s) 469, 1096, 1208
PsyI GACNNNGTC 1 cut(s) 1928
RsaI GTAC 5 cut(s) 51, 318, 343, 898, 1676
RsaNI GTAC 5 cut(s) 50, 317, 342, 897, 1675
RseI CAYNNNNRTG 5 cut(s) 343, 578, 673, 706, 1469
SacI GAGCTC 1 cut(s) 1881
SapI GCTCTTC 1 cut(s) 1305
SatI GCNGC 8 cut(s) 129, 138, 249, 252, 565, 1746, 1767, 2097
Sau3AI GATC 8 cut(s) 399, 469, 643, 658, 1096, 1208, 1360, 1652
Sau96I GGNCC 1 cut(s) 348
SchI GAGTC 3 cut(s) 91, 299, 614
ScrFI CCNGG 2 cut(s) 1185, 1870
SduI GDGCHC 1 cut(s) 1881
SfaNI GCATC 4 cut(s) 365, 526, 1002, 1105
SfcI CTRYAG 1 cut(s) 984
SfoI GGCGCC 1 cut(s) 1612
SinI GGWCC 1 cut(s) 348
SmiMI CAYNNNNRTG 5 cut(s) 343, 578, 673, 706, 1469
SmlI CTYRAG 5 cut(s) 968, 1558, 1853, 1884, 1937
SmoI CTYRAG 5 cut(s) 968, 1558, 1853, 1884, 1937
SpeI ACTAGT 1 cut(s) 143
Sse9I AATT 6 cut(s) 184, 193, 688, 750, 1679, 1847
SspDI GGCGCC 1 cut(s) 1610
SspMI CTAG 7 cut(s) 117, 144, 474, 588, 1037, 1970, 2084
SstI GAGCTC 1 cut(s) 1881
StyD4I CCNGG 2 cut(s) 1183, 1868
TaaI ACNGT 4 cut(s) 577, 1197, 1404, 1550
TaiI ACGT 2 cut(s) 737, 1605
TaqI TCGA 6 cut(s) 741, 810, 960, 975, 1113, 1667
TasI AATT 6 cut(s) 184, 193, 688, 750, 1679, 1847
TatI WGTACW 2 cut(s) 316, 341
TauI GCSGC 2 cut(s) 254, 1769
TfiI GAWTC 7 cut(s) 62, 335, 512, 1145, 1241, 1274, 1723
TscAI CASTG 3 cut(s) 484, 498, 582
TseFI GTSAC 5 cut(s) 94, 525, 569, 717, 1012
TseI GCWGC 6 cut(s) 128, 137, 248, 564, 1745, 2096
Tsp45I GTSAC 5 cut(s) 94, 525, 569, 717, 1012
TspDTI ATGAA 8 cut(s) 138, 165, 171, 327, 638, 1254, 1701, 2048
TspGWI ACGGA 1 cut(s) 1459
TspRI CASTG 3 cut(s) 484, 498, 582
Tth111I GACNNNGTC 1 cut(s) 1928
Van91I CCANNNNNTGG 3 cut(s) 424, 1379, 1630
Vha464I CTTAAG 3 cut(s) 968, 1558, 1853
VpaK11BI GGWCC 1 cut(s) 348
XagI CCTNNNNNAGG 1 cut(s) 177
XapI RAATTY 2 cut(s) 184, 750
XbaI TCTAGA 1 cut(s) 2083
XceI RCATGY 1 cut(s) 944
XmnI GAANNNNTTC 1 cut(s) 2055
XspI CTAG 7 cut(s) 117, 144, 474, 588, 1037, 1970, 2084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.