Rroxscaffold_5G00363700

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0010980
Physical Location & Seq
Forward (+)
44994075 .. 44999140
5066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00363700.1

Sequence Viewer

Length: 2133 bp
ATGTTCGGGTTTTCTCGCAAACGCATGAAGATTGGACGATTGAAAGTCCAGCTCTCAGATTCTGCTCAGGGAACTAGAAGCCCCATAAGACAGCCGAAACGAAATAACGGCTCCAATAATGACTCTGATGCGCTGGCAAGTAGTATTTCTGATGAGCTCGATTGCCAGTGCCCGTCTTCTGCTCCTGAGATTAGTAATTCCACAATGGGGAGCTCTGAGAATTGGATGGTGTTGTCAATTTCTGGAGACAAGCCTACGCCCCGCTTCAATCATGCGGCGGCTGTAATTGGGGATAAGATGATAGTGGTTGGTGGTGAAACTGGGAGTGAACTGCTAGATGATGTACAGGTGCTCAATTTTGACAGTTTTACGTGGAACACAGCTTCGTCAAAGCTTTACTTGTCACCAAGCAGTCTGCCCTTAAAGATCCCTGCATGCAAGGGCCACAGACTGGTTCCTGGGGGGAAAAAGGCACTCCTGGTTGGAGGAAAGACTGAACCTGGGAGTGACAAAATTTCAGTTTGGGCATTTGACACTGAGACAGAATGCTGGTCTCATATGGAAGCAAAGGGTGATATACCGGTTGCTCGTACTGGTCACACTGTAGTCAGGGCAAGTTCTGTATTAATCCTTTTTGGTGGTGAAGATGCTAAAAGAAGGAAACTGCATGATCTACATATGTTTGATCTGAAGTCATTAACATGGCTACCTCTTCATTGCACAGGAACAGGACCATCTCCGAGGTCCAACCATGTGGCAGCTCTTTATGATGACAAAACTCTTTTTATATTTGGAGGCACGTCAAAATCCAGGACTTTGAATGATTTGTATTCACTTGACTTTGAAACGATGGTATGGTCAAGAATAAAGAAGCGAGGTTTCCATCCATCACCTAGAGCTGGTTGCTGTGGGGTCTTATGTGGAACCAAATGGTATATTGTTGGTGGTGGAAGCAGAAAAAAACGACATGCGGAGACTCTGATCTTTGATGTTTTGAAACTTGAGTGGTCATTGGCCATTGCATCGCCTCCTTCTACAATCACTACGAATAAGGGTTTCAGCCTAGAGCATGTGCAGCACAAAGAAAAGGATTTTCTTGTTGCTTTTGGGGGATCCAGAAAGGAGCCATCAAATCAGGTTGAAGTACTAACCATGGAAAAGAATGAATTATCCACGAGTCGTCGATCTTTTCCCAACAAAGGACCTGGAACTTTGATGCCTGAAAAACGCCCATCAACCAATGGCTTGGCTAGTCAACTAACTAATGGTTCTTCCCAGCGCTCAGTCAATTCAGCTAGACAAAATCTGGCATCTGCAATTGAACAACATGGTTCTGGAAGAAAATCTTTGTCAGAGTCCTTGCTTGTCGATCCAAATCCTGTTTCTGGTAACGTCTCACTTAGGAAACAATTTCATAATGACGAAGAATACAACACTGCTGTTAAGGTGACAAAGGGTTCAGAAGATGAAAGTTCTCTGTTGCAGTCCTCAGAAAAGAAGAAAAGTCAATCTGATTCTGCAGTACAAACTAACATACATGGAGGTAGACTTTACTCAGAGGAGATGGTCTCTGCATATGAGTTCGAAAACTCAAATACCCACAACCATGGACTTGGGAACTTTCCGGTTGATAACAGTGATTCAATATATCCAGAAAGTGATAGTAAACCAGGATCACTATCAGCTCCTTCAAGTATGTACCAATATTACGAGAAACTAATAAGAAAGAATGGGGTTTTAGAAGGACAGTTGGCTGCTGCATTGGCCAGTCGAGAAGCTGCAGAGAAAAACTTATCCTCTGCTCTCAAGAGCCGACAGGAGATTGAGAGAAAATTAGCAGACTCTGGGAAGGAGATAGAGTTACTGAAGGACAAGCTAGCTGGTGTAGAACTAGCTCAAGAAGAGGCTAACAACATGTCAAGTATTGTTCATTCTGACAATGTGAGGCTTGAGCATGATGTGGCTTTCCTCAAGGCTGTTTTGGATGATACCCAAAAGGAGCTGCATTCAACTAGAGGAGTCCTTGCTGGAGAGCGAGCAAGGGCATTCCAACTACAGGTTGAAGTTTTTCATCTTAAACAAAGATTACAATCTATGGAGAACCGAGCACCTACACCGAGGAAACCATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_1 Kelch_4 Kelch_5

Protein Analysis

710

Amino Acids

77.87

Weight (kDa)

8.81

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 72 - 129 2.9e-11 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 72 - 131 4.4e-10 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 72 - 203 7.7e-12 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 76 - 318 3.3e-26 Host cell factor, Kelch-repeats domain
Kelch_1 PF01344 87 - 130 9.9e-08 Kelch motif
Beta-prop_FBX42 PF13415 146 - 269 2e-22 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 148 - 354 1.1e-57 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_TYW4 PF13418 156 - 371 2.9e-12 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 160 - 259 2.8e-12 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 251 - 392 2.3e-18 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 261 - 392 2.8e-11 Attractin/LZTR1 beta-propeller
ACBP4_C PF24922 643 - 700 1.7e-09 Acyl-CoA-binding domain-containing protein 4-6, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18590 AT5G18590
fragaria_vesca FvH4_4g17510 FvH4_4g17510 FvH4_4g17510
malus_domestica MD16G1173400.v1.1
prunus_persica Prupe.1G140300_v2.0.a1 Prupe.1G140300_v2.0.a1
pyrus_communis pycom16g14540
rosa_chinensis RchiOBHm_Chr4g0421431
rosa_laevigata RLG00000007685
rosa_multiflora Rmu_sc0001962.1_g000012
rosa_roxburghii Rroxscaffold_5G00363700
rosa_rugosa Rorug04G0171000 Rorug04G0171100
rosa_samantha Rh4AG231800 Rh4BG234700 Rh4CG246300 Rh4DG230300
rosa_wichuraiana Rw4G020230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 451
AccI GTMKAC 1 cut(s) 1546
AciI CCGC 4 cut(s) 262, 275, 278, 971
AclWI GGATC 5 cut(s) 421, 1107, 1120, 1364, 1681
AcoI YGGCCR 2 cut(s) 1014, 1764
AcsI RAATTY 1 cut(s) 513
AcuI CTGAAG 2 cut(s) 710, 1886
AfaI GTAC 5 cut(s) 345, 592, 1146, 1524, 1700
AfeI AGCGCT 1 cut(s) 1280
AfiI CCNNNNNNNGG 6 cut(s) 207, 451, 899, 1199, 1385, 2056
AflIII ACRYGT 1 cut(s) 1914
AgeI ACCGGT 1 cut(s) 580
AjiI CACGTC 1 cut(s) 801
AjnI CCWGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 1366, 1398
Alw21I GWGCWC 4 cut(s) 159, 215, 354, 2110
Alw26I GTCTC 6 cut(s) 240, 533, 558, 968, 1399, 1573
AlwI GGATC 5 cut(s) 421, 1107, 1120, 1364, 1681
AlwNI CAGNNNCTG 2 cut(s) 62, 1844
Aor51HI AGCGCT 1 cut(s) 1280
AoxI GGCC 3 cut(s) 442, 1014, 1764
ApeKI GCWGC 6 cut(s) 758, 1075, 1754, 1757, 1778, 2002
ApoI RAATTY 1 cut(s) 513
AseI ATTAAT 1 cut(s) 626
AsiGI ACCGGT 1 cut(s) 580
Asp700I GAANNNNTTC 2 cut(s) 2067, 2126
AspLEI GCGC 2 cut(s) 133, 1281
AspS9I GGNCC 4 cut(s) 442, 731, 744, 1202
AsuHPI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1459
AsuII TTCGAA 1 cut(s) 1584
AsuNHI GCTAGC 1 cut(s) 1876
AvaII GGWCC 3 cut(s) 731, 744, 1202
BaeGI GKGCMC 1 cut(s) 173
BalI TGGCCA 2 cut(s) 1016, 1766
BamHI GGATCC 1 cut(s) 1112
BanII GRGCYC 2 cut(s) 159, 215
BauI CACGAG 1 cut(s) 1174
BbsI GAAGAC 1 cut(s) 168
Bbv12I GWGCWC 4 cut(s) 159, 215, 354, 2110
BbvI GCAGC 6 cut(s) 770, 1087, 1741, 1744, 1765, 1989
BccI CCATC 8 cut(s) 220, 742, 844, 891, 895, 1135, 1240, 1558
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
BcoDI GTCTC 6 cut(s) 240, 533, 558, 968, 1399, 1573
BfmI CTRYAG 4 cut(s) 603, 1518, 1779, 2054
BfoI RGCGCY 1 cut(s) 1282
BisI GCNGC 8 cut(s) 276, 279, 759, 1076, 1755, 1758, 1779, 2003
BlsI GCNGC 8 cut(s) 277, 280, 760, 1077, 1756, 1759, 1780, 2004
BmcAI AGTACT 1 cut(s) 1146
Bme1390I CCNGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
Bme18I GGWCC 3 cut(s) 731, 744, 1202
BmgBI CACGTC 1 cut(s) 801
BmgT120I GGNCC 4 cut(s) 442, 731, 744, 1202
BmiI GGNNCC 5 cut(s) 112, 456, 925, 1114, 1125
BmrFI CCNGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
BmtI GCTAGC 1 cut(s) 1880
BmuI ACTGGG 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 168
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
BpmI CTGGAG 2 cut(s) 264, 2049
Bpu10I CCTNAGC 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 1584
BpuEI CTTGAG 5 cut(s) 1022, 1790, 1881, 1955, 1970
BsaAI YACGTR 1 cut(s) 372
BsaBI GATNNNNATC 3 cut(s) 1374, 1678, 2089
BsaI GGTCTC 2 cut(s) 558, 1573
BsaJI CCNNGG 6 cut(s) 458, 500, 740, 1152, 1606, 2117
BsaWI WCCGGW 2 cut(s) 580, 1624
BsaXI ACNNNNNCTCC 2 cut(s) 1844, 1874
Bsc4I CCNNNNNNNGG 6 cut(s) 207, 451, 899, 1199, 1385, 2056
Bse118I RCCGGY 1 cut(s) 580
Bse1I ACTGG 5 cut(s) 166, 325, 456, 598, 1767
Bse3DI GCAATG 2 cut(s) 715, 1017
Bse8I GATNNNNATC 3 cut(s) 1374, 1678, 2089
BseBI CCWGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
BseDI CCNNGG 6 cut(s) 458, 500, 740, 1152, 1606, 2117
BseGI GGATG 3 cut(s) 231, 883, 1990
BseJI GATNNNNATC 3 cut(s) 1374, 1678, 2089
BseLI CCNNNNNNNGG 6 cut(s) 207, 451, 899, 1199, 1385, 2056
BseMI GCAATG 2 cut(s) 715, 1017
BseMII CTCAG 8 cut(s) 69, 80, 177, 207, 528, 1296, 1503, 1569
BseNI ACTGG 5 cut(s) 166, 325, 456, 598, 1767
BseRI GAGGAG 2 cut(s) 1574, 2031
BseSI GKGCMC 1 cut(s) 173
BseXI GCAGC 6 cut(s) 770, 1087, 1741, 1744, 1765, 1989
BseYI CCCAGC 1 cut(s) 1275
BsgI GTGCAG 1 cut(s) 1094
BshFI GGCC 3 cut(s) 444, 1016, 1766
BshTI ACCGGT 1 cut(s) 580
BsiHKAI GWGCWC 4 cut(s) 159, 215, 354, 2110
BsiSI CCGG 2 cut(s) 581, 1625
BslI CCNNNNNNNGG 6 cut(s) 207, 451, 899, 1199, 1385, 2056
BsmAI GTCTC 6 cut(s) 240, 533, 558, 968, 1399, 1573
BsmBI CGTCTC 1 cut(s) 1399
BsmI GAATGC 3 cut(s) 551, 2005, 2045
BsnI GGCC 3 cut(s) 444, 1016, 1766
Bso31I GGTCTC 2 cut(s) 558, 1573
Bsp119I TTCGAA 1 cut(s) 1584
Bsp1286I GDGCHC 5 cut(s) 159, 173, 215, 354, 2110
Bsp1407I TGTACA 1 cut(s) 343
Bsp143I GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
Bsp19I CCATGG 2 cut(s) 1152, 1606
BspACI CCGC 4 cut(s) 262, 275, 278, 971
BspANI GGCC 3 cut(s) 444, 1016, 1766
BspCNI CTCAG 8 cut(s) 68, 79, 178, 208, 529, 1295, 1502, 1568
BspLI GGNNCC 5 cut(s) 112, 456, 925, 1114, 1125
BspMAI CTGCAG 2 cut(s) 1522, 1783
BspOI GCTAGC 1 cut(s) 1880
BspPI GGATC 5 cut(s) 421, 1107, 1120, 1364, 1681
BspT104I TTCGAA 1 cut(s) 1584
BspTNI GGTCTC 2 cut(s) 558, 1573
BsrDI GCAATG 2 cut(s) 715, 1017
BsrFI RCCGGY 1 cut(s) 580
BsrGI TGTACA 1 cut(s) 343
BsrI ACTGG 5 cut(s) 166, 325, 456, 598, 1767
BssAI RCCGGY 1 cut(s) 580
BssECI CCNNGG 6 cut(s) 458, 500, 740, 1152, 1606, 2117
BssMI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
BssSI CACGAG 1 cut(s) 1174
BssT1I CCWWGG 2 cut(s) 1152, 1606
Bst2BI CACGAG 1 cut(s) 1174
Bst2UI CCWGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
Bst4CI ACNGT 4 cut(s) 365, 604, 1637, 1749
Bst6I CTCTTC 2 cut(s) 717, 1896
BstAUI TGTACA 1 cut(s) 343
BstBAI YACGTR 1 cut(s) 372
BstBI TTCGAA 1 cut(s) 1584
BstC8I GCNNGC 4 cut(s) 135, 436, 1878, 2037
BstDEI CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1400, 1489, 1555
BstDSI CCRYGG 2 cut(s) 1152, 1606
BstF5I GGATG 3 cut(s) 231, 883, 1990
BstH2I RGCGCY 1 cut(s) 1282
BstHHI GCGC 2 cut(s) 133, 1281
BstKTI GATC 8 cut(s) 429, 673, 688, 984, 1115, 1187, 1372, 1676
BstMAI GTCTC 6 cut(s) 240, 533, 558, 968, 1399, 1573
BstMBI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
BstMWI GCNNNNNNNGC 2 cut(s) 1075, 1763
BstNI CCWGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
BstNSI RCATGY 4 cut(s) 438, 971, 1073, 1918
BstSCI CCNGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
BstSFI CTRYAG 4 cut(s) 603, 1518, 1779, 2054
BstSLI GKGCMC 1 cut(s) 173
BstV1I GCAGC 6 cut(s) 770, 1087, 1741, 1744, 1765, 1989
BstV2I GAAGAC 1 cut(s) 168
BstX2I RGATCY 2 cut(s) 426, 1112
BstXI CCANNNNNNTGG 4 cut(s) 754, 1246, 1607, 1613
BstYI RGATCY 2 cut(s) 426, 1112
BsuRI GGCC 3 cut(s) 444, 1016, 1766
BtgI CCRYGG 2 cut(s) 1152, 1606
BtgZI GCGATG 1 cut(s) 1008
BtrI CACGTC 1 cut(s) 801
BtsCI GGATG 3 cut(s) 231, 883, 1990
BtsI GCAGTG 1 cut(s) 1434
BtsIMutI CAGTG 5 cut(s) 173, 534, 600, 1434, 1642
Cac8I GCNNGC 4 cut(s) 135, 436, 1878, 2037
CaiI CAGNNNCTG 2 cut(s) 62, 1844
CfoI GCGC 2 cut(s) 133, 1281
Cfr10I RCCGGY 1 cut(s) 580
Cfr13I GGNCC 4 cut(s) 442, 731, 744, 1202
Csp6I GTAC 5 cut(s) 344, 591, 1145, 1523, 1699
CspAI ACCGGT 1 cut(s) 580
CviQI GTAC 5 cut(s) 344, 591, 1145, 1523, 1699
DdeI CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1400, 1489, 1555
DpnI GATC 8 cut(s) 428, 672, 687, 983, 1114, 1186, 1371, 1675
DpnII GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
EaeI YGGCCR 2 cut(s) 1014, 1764
Eam1104I CTCTTC 2 cut(s) 717, 1896
EarI CTCTTC 2 cut(s) 717, 1896
Ecl136II GAGCTC 2 cut(s) 157, 213
Eco130I CCWWGG 2 cut(s) 1152, 1606
Eco24I GRGCYC 2 cut(s) 159, 215
Eco31I GGTCTC 2 cut(s) 558, 1573
Eco47I GGWCC 3 cut(s) 731, 744, 1202
Eco47III AGCGCT 1 cut(s) 1280
Eco53kI GAGCTC 2 cut(s) 157, 213
Eco57I CTGAAG 2 cut(s) 710, 1886
EcoICRI GAGCTC 2 cut(s) 157, 213
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRII CCWGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
EcoT14I CCWWGG 2 cut(s) 1152, 1606
EcoT38I GRGCYC 2 cut(s) 159, 215
ErhI CCWWGG 2 cut(s) 1152, 1606
Esp3I CGTCTC 1 cut(s) 1399
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 1330, 1362
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 3 cut(s) 558, 678, 1576
FblI GTMKAC 1 cut(s) 1546
Fnu4HI GCNGC 8 cut(s) 276, 279, 759, 1076, 1755, 1758, 1779, 2003
FokI GGATG 3 cut(s) 238, 870, 1997
FriOI GRGCYC 2 cut(s) 159, 215
Fsp4HI GCNGC 8 cut(s) 276, 279, 759, 1076, 1755, 1758, 1779, 2003
GlaI GCGC 2 cut(s) 132, 1280
GluI GCNGC 8 cut(s) 276, 279, 759, 1076, 1755, 1758, 1779, 2003
GsaI CCCAGC 1 cut(s) 1279
GsuI CTGGAG 2 cut(s) 264, 2049
HaeII RGCGCY 1 cut(s) 1282
HaeIII GGCC 3 cut(s) 444, 1016, 1766
HapII CCGG 2 cut(s) 581, 1625
HhaI GCGC 2 cut(s) 133, 1281
Hin6I GCGC 2 cut(s) 131, 1279
HinP1I GCGC 2 cut(s) 131, 1279
HincII GTYRAC 1 cut(s) 1256
HindII GTYRAC 1 cut(s) 1256
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 9 cut(s) 59, 122, 976, 1177, 1355, 1514, 1640, 1841, 2019
HpaII CCGG 2 cut(s) 581, 1625
HphI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1459
Hpy166II GTNNAC 4 cut(s) 329, 1256, 1547, 1667
Hpy188III TCNNGA 9 cut(s) 185, 243, 861, 1116, 1335, 1652, 1772, 1807, 1898
Hpy8I GTNNAC 4 cut(s) 329, 1256, 1547, 1667
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 6 cut(s) 651, 1041, 1698, 1736, 1843, 1861
HpyCH4III ACNGT 4 cut(s) 365, 604, 1637, 1749
HpyCH4IV ACGT 3 cut(s) 371, 800, 1392
HpyF10VI GCNNNNNNNGC 2 cut(s) 1075, 1763
HpyF3I CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1400, 1489, 1555
HpySE526I ACGT 3 cut(s) 371, 800, 1392
HspAI GCGC 2 cut(s) 131, 1279
Kzo9I GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
LmnI GCTCC 6 cut(s) 116, 187, 210, 1123, 1690, 1999
Lsp1109I GCAGC 6 cut(s) 770, 1087, 1741, 1744, 1765, 1989
LweI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
MaeII ACGT 3 cut(s) 371, 800, 1392
MaeIII GTNAC 6 cut(s) 402, 506, 596, 1388, 1447, 1860
MalI GATC 8 cut(s) 428, 672, 687, 983, 1114, 1186, 1371, 1675
MboI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
MfeI CAATTG 1 cut(s) 1317
MflI RGATCY 2 cut(s) 426, 1112
MhlI GDGCHC 5 cut(s) 159, 173, 215, 354, 2110
MlsI TGGCCA 2 cut(s) 1016, 1766
MluNI TGGCCA 2 cut(s) 1016, 1766
MlyI GAGTC 6 cut(s) 116, 970, 1186, 1364, 1835, 2028
MmeI TCCRAC 3 cut(s) 463, 771, 2074
Mox20I TGGCCA 2 cut(s) 1016, 1766
MroXI GAANNNNTTC 2 cut(s) 2067, 2126
MscI TGGCCA 2 cut(s) 1016, 1766
MseI TTAA 5 cut(s) 422, 626, 698, 1443, 2076
MslI CAYNNNNRTG 2 cut(s) 700, 1605
Msp20I TGGCCA 2 cut(s) 1016, 1766
MspI CCGG 2 cut(s) 581, 1625
MspR9I CCNGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
MunI CAATTG 1 cut(s) 1317
Mva1269I GAATGC 3 cut(s) 551, 2005, 2045
MvaI CCWGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
MwoI GCNNNNNNNGC 2 cut(s) 1075, 1763
NcoI CCATGG 2 cut(s) 1152, 1606
NdeI CATATG 3 cut(s) 558, 678, 1576
NdeII GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
NheI GCTAGC 1 cut(s) 1876
NlaIV GGNNCC 5 cut(s) 112, 456, 925, 1114, 1125
NmuCI GTSAC 4 cut(s) 402, 506, 596, 1447
NspI RCATGY 4 cut(s) 438, 971, 1073, 1918
NspV TTCGAA 1 cut(s) 1584
PaeI GCATGC 1 cut(s) 438
PciI ACATGT 1 cut(s) 1914
PctI GAATGC 3 cut(s) 551, 2005, 2045
PdmI GAANNNNTTC 2 cut(s) 2067, 2126
PfeI GAWTC 3 cut(s) 59, 1514, 1640
PflMI CCANNNNNTGG 1 cut(s) 451
PfoI TCCNGGA 1 cut(s) 809
PinAI ACCGGT 1 cut(s) 580
PkrI GCNGC 8 cut(s) 277, 280, 760, 1077, 1756, 1759, 1780, 2004
PleI GAGTC 6 cut(s) 116, 970, 1185, 1363, 1835, 2027
PpsI GAGTC 6 cut(s) 116, 970, 1185, 1363, 1835, 2027
Ppu21I YACGTR 1 cut(s) 372
PpuMI RGGWCCY 1 cut(s) 1202
PscI ACATGT 1 cut(s) 1914
PshBI ATTAAT 1 cut(s) 626
Psp124BI GAGCTC 2 cut(s) 159, 215
Psp5II RGGWCCY 1 cut(s) 1202
Psp6I CCWGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
PspFI CCCAGC 1 cut(s) 1275
PspGI CCWGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
PspN4I GGNNCC 5 cut(s) 112, 456, 925, 1114, 1125
PspPI GGNCC 4 cut(s) 442, 731, 744, 1202
PspPPI RGGWCCY 1 cut(s) 1202
PstI CTGCAG 2 cut(s) 1522, 1783
PstNI CAGNNNCTG 2 cut(s) 62, 1844
PsuI RGATCY 2 cut(s) 426, 1112
RsaI GTAC 5 cut(s) 345, 592, 1146, 1524, 1700
RsaNI GTAC 5 cut(s) 344, 591, 1145, 1523, 1699
RseI CAYNNNNRTG 2 cut(s) 700, 1605
SacI GAGCTC 2 cut(s) 159, 215
SaqAI TTAA 5 cut(s) 422, 626, 698, 1443, 2076
SatI GCNGC 8 cut(s) 276, 279, 759, 1076, 1755, 1758, 1779, 2003
Sau3AI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1369, 1673
Sau96I GGNCC 4 cut(s) 442, 731, 744, 1202
ScaI AGTACT 1 cut(s) 1146
SchI GAGTC 6 cut(s) 116, 970, 1186, 1364, 1835, 2028
ScrFI CCNGG 6 cut(s) 459, 479, 501, 811, 1206, 1671
SduI GDGCHC 5 cut(s) 159, 173, 215, 354, 2110
SfaNI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
SfcI CTRYAG 4 cut(s) 603, 1518, 1779, 2054
SfuI TTCGAA 1 cut(s) 1584
SinI GGWCC 3 cut(s) 731, 744, 1202
SmiMI CAYNNNNRTG 2 cut(s) 700, 1605
SmlI CTYRAG 5 cut(s) 1001, 1805, 1896, 1949, 1970
SmoI CTYRAG 5 cut(s) 1001, 1805, 1896, 1949, 1970
SphI GCATGC 1 cut(s) 438
SsiI CCGC 4 cut(s) 262, 275, 278, 971
SspI AATATT 1 cut(s) 1706
SstI GAGCTC 2 cut(s) 159, 215
StyD4I CCNGG 6 cut(s) 457, 477, 499, 809, 1204, 1669
StyI CCWWGG 2 cut(s) 1152, 1606
TaaI ACNGT 4 cut(s) 365, 604, 1637, 1749
TaiI ACGT 3 cut(s) 374, 803, 1395
TaqI TCGA 5 cut(s) 159, 1183, 1368, 1584, 1771
TatI WGTACW 3 cut(s) 343, 1144, 1522
TauI GCSGC 2 cut(s) 278, 281
TfiI GAWTC 3 cut(s) 59, 1514, 1640
Tru1I TTAA 5 cut(s) 422, 626, 698, 1443, 2076
Tru9I TTAA 5 cut(s) 422, 626, 698, 1443, 2076
TscAI CASTG 5 cut(s) 173, 541, 607, 1441, 1642
TseFI GTSAC 4 cut(s) 402, 506, 596, 1447
TseI GCWGC 6 cut(s) 758, 1075, 1754, 1757, 1778, 2002
Tsp45I GTSAC 4 cut(s) 402, 506, 596, 1447
TspDTI ATGAA 7 cut(s) 41, 704, 1179, 1403, 1482, 1919, 2060
TspRI CASTG 5 cut(s) 173, 541, 607, 1441, 1642
Van91I CCANNNNNTGG 1 cut(s) 451
VpaK11BI GGWCC 3 cut(s) 731, 744, 1202
VspI ATTAAT 1 cut(s) 626
XapI RAATTY 1 cut(s) 513
XceI RCATGY 4 cut(s) 438, 971, 1073, 1918
XmiI GTMKAC 1 cut(s) 1546
XmnI GAANNNNTTC 2 cut(s) 2067, 2126
ZrmI AGTACT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.