RchiOBHm_Chr4g0421431

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0010980
Physical Location & Seq
Forward (+)
47097744 .. 47103066
5323 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39108

Sequence Viewer

Length: 2136 bp
ATGTTCGGTTTTTCTCGCAAACGCATGAAGATTGGACGATTGAAAGTCCAGCTCTCAGATTCTGCTCAGGGAACTAGAAGCCCCATAAGACAGCCGAAACAAAATAACAGCTCAAATAATGACTCTGATGCGCCGGCAATTAGTATTTCTGATGAGCTCGATTGCCAGTGTCCGTCTTCTGCTCCTGAGATTAGTAATTCCACAATGGGGAGCTCTGAGAATTGGATGGTGTTGTCAATTTCTGGAGATAAGCCTACGCCCCGCTTCAATCATGCGGCGGCTGTAATTGGGAATAAGATGATAGTGGTTGGTGGTGAATCTGGGAGTGAACTGCTAGATGATGTACAGGTGCTCAATTTTGACAGTTTTACGTGGAACACAGCTTCGTCAAAGCTTTACTTGTCACCAAGCAGTCTGCCCTTAAAGATCCCTGCATGCAAGGGCCACAGACTGGTTTCCTGGGGGAAAAAGGCACTCCTGGTTGGAGGAAAGACTGAACCTGGGAGTGACAAAATTTCAGTTTGGGCATTTGACACTGAGACAGAATGCTGGTCTCATATGGAAGCAAAGGGTGATATACCGGTTGCTCGTACTGGTCACACTGTAGTCAGGGCAAGTTCTGTATTAATCCTTTTTGGTGGTGAAGATGCTAAAAGACGGAAACTGCATGATCTACATATGTTTGATCTGAAGTCATTAACATGGCTACCTCTTCATTGCACAGGAACGGGACCAGCTCCAAGGTCCAACCATGTGGCAGCTCTTTATGATGACAAAACTCTTTTTATATTTGGAGGCACGTCAAAATCCAGGACTTTGAATGATTTGTATTCACTTGACTTTGAAACGATGGTATGGTCAAGAATAAAGAAGCGAGGTTTCCACCCATCACCTAGAGCTGGTTGCTGTGGGGTCTTATGTGGAACCAAATGGTATATCGTTGGTGGTGGAAGCAGAAAAAAACGGCATGCGGAGACTCTGATCTTTGATGTTTTGAAACTTGAGTGGTCATTGGCCATTGCATCGCCTCCTTCTACAATCACTACGAATAAGGGTTTCAGCCTAGAGCATGTGCAGCACAAAGAAAAGGATTTTCTTGTTGCTTTTGGGGGATCCAGGAAGGAGCCATCAAATCAGGTTGAAGTACTAACCATGGAAAAGAATGAATTATCCATGAGTCGTCGATCTTTTCCCAGCAAAGGACCTGGAACTTTGATGCCTGAAAAACGCCCATCAACCAATGGCTTGGCTAGTCAACTAACTAACGGTTCTTCCCAGCGCTCAGTCAATTCAGTTGCTAGACAAAATCTGGCATCTGCAATTGAACAACATGGTTCTGGAAGAAAATCTTTGTCAGAGTCCTTGCTTGTCGATCCAAATCCTGTTTCTGGTAATGTCTCACTTAGGAAACAATTTCATAATGACGAAGAATACAACACTTCTGTTAAGGTGACAAAGGGTTCAGAAGATGAAAGTTCCCTCTTGCAGCCCTCAGAAAAGAAGAAAAGTCAATCTGATTCTGCAGTACAAACTAACATACATGGAGGTAGACTTTACTCAGAGGAGATGGTCTCTGCATATGAGTTCGAAAACTCAAATCCCCACAACCATGGACTTGGGAACTTTCCGGTTGATAACAATGATTCAATATATCCAGAAAGTGATAGTAAACCAGGATCACTATCAGCGCCTTCAAGTATGTACCAATATTATGAGAAACTAATAAGAAAGAATGGGGTTTTAGAAGGACAGTTGGCTGCTGCATTGGCCAGTCGAGAAGCTGCAGAGAAAAACTTATCCTCTGCTCTCAAGAGCCGACAGGAGATTGAGAGAAAATTAGCAGACTCTGGGAAGGAGATAGAGTTACTGAAGGACAAGCTAGCTGGTGTAGAACTAGCCCAAGAAGAGGCCAACAACATGTCAAGTATTGTTCATTCTGACAATGTGAGGCTTGAGCATGATGTGGCTTTCCTCAAGGCTGTTTTGGATGATACCCAAAAGGAGCTGCATTCAACTAGAGGAGTCCTTGCTGGAGAGCGAGCAAGGGCATTCCAGCTACAGGTTGAAGTTTTTCATCTTAAACAAAGATTACAATCTATGGAGAACCGAGCACCTACACCGAGGAAACCATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_1 Kelch_4 Kelch_5

Protein Analysis

711

Amino Acids

78.12

Weight (kDa)

8.82

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 72 - 129 1.2e-11 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 72 - 131 5.9e-10 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 72 - 203 6.5e-12 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 76 - 318 5.9e-26 Host cell factor, Kelch-repeats domain
Kelch_1 PF01344 87 - 130 3.8e-08 Kelch motif
Beta-prop_FBX42 PF13415 146 - 269 3.5e-23 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 148 - 354 8.2e-59 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_TYW4 PF13418 149 - 371 1.3e-12 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 160 - 293 3.1e-19 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 251 - 393 1.9e-18 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 261 - 393 2.3e-11 Attractin/LZTR1 beta-propeller
ACBP4_C PF24922 644 - 701 1.7e-09 Acyl-CoA-binding domain-containing protein 4-6, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18590 AT5G18590
fragaria_vesca FvH4_4g17510 FvH4_4g17510 FvH4_4g17510
malus_domestica MD16G1173400.v1.1
prunus_persica Prupe.1G140300_v2.0.a1 Prupe.1G140300_v2.0.a1
pyrus_communis pycom16g14540
rosa_chinensis RchiOBHm_Chr4g0421431
rosa_laevigata RLG00000007685
rosa_multiflora Rmu_sc0001962.1_g000012
rosa_roxburghii Rroxscaffold_5G00363700
rosa_rugosa Rorug04G0171000 Rorug04G0171100
rosa_samantha Rh4AG231800 Rh4BG234700 Rh4CG246300 Rh4DG230300
rosa_wichuraiana Rw4G020230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 451
AccI GTMKAC 1 cut(s) 1549
AciI CCGC 4 cut(s) 262, 275, 278, 971
AclWI GGATC 5 cut(s) 421, 1107, 1120, 1367, 1684
AcoI YGGCCR 2 cut(s) 1014, 1767
AcsI RAATTY 1 cut(s) 513
AcuI CTGAAG 2 cut(s) 710, 1889
AfaI GTAC 5 cut(s) 345, 592, 1146, 1527, 1703
AfeI AGCGCT 1 cut(s) 1280
AfiI CCNNNNNNNGG 7 cut(s) 207, 451, 899, 1199, 1388, 1906, 2059
AflIII ACRYGT 1 cut(s) 1917
AgeI ACCGGT 1 cut(s) 580
AjiI CACGTC 1 cut(s) 801
AjnI CCWGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
AjuI GAANNNNNNNTTGG 2 cut(s) 1369, 1401
Alw21I GWGCWC 4 cut(s) 159, 215, 354, 2113
Alw26I GTCTC 5 cut(s) 533, 558, 968, 1402, 1576
AlwI GGATC 5 cut(s) 421, 1107, 1120, 1367, 1684
AlwNI CAGNNNCTG 2 cut(s) 62, 1847
Aor51HI AGCGCT 1 cut(s) 1280
AoxI GGCC 4 cut(s) 442, 1014, 1767, 1908
ApeKI GCWGC 7 cut(s) 758, 1075, 1486, 1757, 1760, 1781, 2005
ApoI RAATTY 1 cut(s) 513
AseI ATTAAT 1 cut(s) 626
AsiGI ACCGGT 1 cut(s) 580
Asp700I GAANNNNTTC 2 cut(s) 2070, 2129
AspLEI GCGC 3 cut(s) 133, 1281, 1690
AspS9I GGNCC 4 cut(s) 442, 731, 744, 1202
AsuHPI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1462
AsuII TTCGAA 1 cut(s) 1587
AsuNHI GCTAGC 1 cut(s) 1879
AvaII GGWCC 3 cut(s) 731, 744, 1202
BalI TGGCCA 2 cut(s) 1016, 1769
BamHI GGATCC 1 cut(s) 1112
BanII GRGCYC 2 cut(s) 159, 215
BbsI GAAGAC 1 cut(s) 168
Bbv12I GWGCWC 4 cut(s) 159, 215, 354, 2113
BbvI GCAGC 7 cut(s) 770, 1087, 1498, 1744, 1747, 1768, 1992
BccI CCATC 6 cut(s) 220, 844, 895, 1135, 1240, 1561
BceAI ACGGC 1 cut(s) 980
BciT130I CCWGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
BcoDI GTCTC 5 cut(s) 533, 558, 968, 1402, 1576
BfmI CTRYAG 4 cut(s) 603, 1521, 1782, 2057
BfoI RGCGCY 2 cut(s) 1282, 1691
BisI GCNGC 9 cut(s) 276, 279, 759, 1076, 1487, 1758, 1761, 1782, 2006
BlsI GCNGC 9 cut(s) 277, 280, 760, 1077, 1488, 1759, 1762, 1783, 2007
BmcAI AGTACT 1 cut(s) 1146
Bme1390I CCNGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
Bme18I GGWCC 3 cut(s) 731, 744, 1202
BmgBI CACGTC 1 cut(s) 801
BmgT120I GGNCC 4 cut(s) 442, 731, 744, 1202
BmiI GGNNCC 4 cut(s) 732, 925, 1114, 1125
BmrFI CCNGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
BmsI GCATC 5 cut(s) 118, 637, 1031, 1206, 1322
BmtI GCTAGC 1 cut(s) 1883
BpiI GAAGAC 1 cut(s) 168
BplI GAGNNNNNCTC 2 cut(s) 1556, 1588
BpmI CTGGAG 2 cut(s) 264, 2052
Bpu10I CCTNAGC 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 1587
BpuEI CTTGAG 4 cut(s) 1022, 1793, 1958, 1973
BsaAI YACGTR 1 cut(s) 372
BsaBI GATNNNNATC 3 cut(s) 1377, 1681, 2092
BsaI GGTCTC 2 cut(s) 558, 1576
BsaJI CCNNGG 6 cut(s) 459, 500, 740, 1152, 1609, 2120
BsaWI WCCGGW 2 cut(s) 580, 1627
BsaXI ACNNNNNCTCC 2 cut(s) 1847, 1877
Bsc4I CCNNNNNNNGG 7 cut(s) 207, 451, 899, 1199, 1388, 1906, 2059
Bse118I RCCGGY 2 cut(s) 133, 580
Bse1I ACTGG 4 cut(s) 166, 456, 598, 1770
Bse3DI GCAATG 2 cut(s) 715, 1017
Bse8I GATNNNNATC 3 cut(s) 1377, 1681, 2092
BseBI CCWGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
BseDI CCNNGG 6 cut(s) 459, 500, 740, 1152, 1609, 2120
BseGI GGATG 2 cut(s) 231, 1993
BseJI GATNNNNATC 3 cut(s) 1377, 1681, 2092
BseLI CCNNNNNNNGG 7 cut(s) 207, 451, 899, 1199, 1388, 1906, 2059
BseMI GCAATG 2 cut(s) 715, 1017
BseMII CTCAG 8 cut(s) 69, 80, 177, 207, 528, 1296, 1506, 1572
BseNI ACTGG 4 cut(s) 166, 456, 598, 1770
BseRI GAGGAG 2 cut(s) 1577, 2034
BseXI GCAGC 7 cut(s) 770, 1087, 1498, 1744, 1747, 1768, 1992
BseYI CCCAGC 2 cut(s) 1193, 1275
BsgI GTGCAG 1 cut(s) 1094
BshFI GGCC 4 cut(s) 444, 1016, 1769, 1910
BshTI ACCGGT 1 cut(s) 580
BsiHKAI GWGCWC 4 cut(s) 159, 215, 354, 2113
BsiSI CCGG 3 cut(s) 134, 581, 1628
BslFI GGGAC 1 cut(s) 744
BslI CCNNNNNNNGG 7 cut(s) 207, 451, 899, 1199, 1388, 1906, 2059
BsmAI GTCTC 5 cut(s) 533, 558, 968, 1402, 1576
BsmFI GGGAC 1 cut(s) 744
BsmI GAATGC 3 cut(s) 551, 2008, 2048
BsnI GGCC 4 cut(s) 444, 1016, 1769, 1910
Bso31I GGTCTC 2 cut(s) 558, 1576
Bsp119I TTCGAA 1 cut(s) 1587
Bsp1286I GDGCHC 4 cut(s) 159, 215, 354, 2113
Bsp1407I TGTACA 1 cut(s) 343
Bsp143I GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
Bsp19I CCATGG 2 cut(s) 1152, 1609
BspACI CCGC 4 cut(s) 262, 275, 278, 971
BspANI GGCC 4 cut(s) 444, 1016, 1769, 1910
BspCNI CTCAG 8 cut(s) 68, 79, 178, 208, 529, 1295, 1505, 1571
BspLI GGNNCC 4 cut(s) 732, 925, 1114, 1125
BspMAI CTGCAG 2 cut(s) 1525, 1786
BspOI GCTAGC 1 cut(s) 1883
BspPI GGATC 5 cut(s) 421, 1107, 1120, 1367, 1684
BspT104I TTCGAA 1 cut(s) 1587
BspTNI GGTCTC 2 cut(s) 558, 1576
BsrDI GCAATG 2 cut(s) 715, 1017
BsrFI RCCGGY 2 cut(s) 133, 580
BsrGI TGTACA 1 cut(s) 343
BsrI ACTGG 4 cut(s) 166, 456, 598, 1770
BssAI RCCGGY 2 cut(s) 133, 580
BssECI CCNNGG 6 cut(s) 459, 500, 740, 1152, 1609, 2120
BssMI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
BssT1I CCWWGG 3 cut(s) 740, 1152, 1609
Bst2UI CCWGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
Bst4CI ACNGT 4 cut(s) 365, 604, 1268, 1752
Bst6I CTCTTC 2 cut(s) 717, 1899
BstAUI TGTACA 1 cut(s) 343
BstBAI YACGTR 1 cut(s) 372
BstBI TTCGAA 1 cut(s) 1587
BstC8I GCNNGC 5 cut(s) 135, 436, 969, 1881, 2040
BstDEI CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1403, 1492, 1558
BstDSI CCRYGG 2 cut(s) 1152, 1609
BstF5I GGATG 2 cut(s) 231, 1993
BstH2I RGCGCY 2 cut(s) 1282, 1691
BstHHI GCGC 3 cut(s) 133, 1281, 1690
BstKTI GATC 8 cut(s) 429, 673, 688, 984, 1115, 1187, 1375, 1679
BstMAI GTCTC 5 cut(s) 533, 558, 968, 1402, 1576
BstMBI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
BstMWI GCNNNNNNNGC 2 cut(s) 1075, 1766
BstNI CCWGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
BstNSI RCATGY 4 cut(s) 438, 971, 1073, 1921
BstSCI CCNGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
BstSFI CTRYAG 4 cut(s) 603, 1521, 1782, 2057
BstV1I GCAGC 7 cut(s) 770, 1087, 1498, 1744, 1747, 1768, 1992
BstV2I GAAGAC 1 cut(s) 168
BstX2I RGATCY 2 cut(s) 426, 1112
BstXI CCANNNNNNTGG 4 cut(s) 754, 1246, 1610, 1616
BstYI RGATCY 2 cut(s) 426, 1112
BsuRI GGCC 4 cut(s) 444, 1016, 1769, 1910
BtgI CCRYGG 2 cut(s) 1152, 1609
BtgZI GCGATG 1 cut(s) 1008
BtrI CACGTC 1 cut(s) 801
BtsCI GGATG 2 cut(s) 231, 1993
BtsIMutI CAGTG 3 cut(s) 173, 534, 600
Cac8I GCNNGC 5 cut(s) 135, 436, 969, 1881, 2040
CaiI CAGNNNCTG 2 cut(s) 62, 1847
CfoI GCGC 3 cut(s) 133, 1281, 1690
Cfr10I RCCGGY 2 cut(s) 133, 580
Cfr13I GGNCC 4 cut(s) 442, 731, 744, 1202
Csp6I GTAC 5 cut(s) 344, 591, 1145, 1526, 1702
CspAI ACCGGT 1 cut(s) 580
CviQI GTAC 5 cut(s) 344, 591, 1145, 1526, 1702
DdeI CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1403, 1492, 1558
DpnI GATC 8 cut(s) 428, 672, 687, 983, 1114, 1186, 1374, 1678
DpnII GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
EaeI YGGCCR 2 cut(s) 1014, 1767
Eam1104I CTCTTC 2 cut(s) 717, 1899
EarI CTCTTC 2 cut(s) 717, 1899
Ecl136II GAGCTC 2 cut(s) 157, 213
Eco130I CCWWGG 3 cut(s) 740, 1152, 1609
Eco24I GRGCYC 2 cut(s) 159, 215
Eco31I GGTCTC 2 cut(s) 558, 1576
Eco47I GGWCC 3 cut(s) 731, 744, 1202
Eco47III AGCGCT 1 cut(s) 1280
Eco53kI GAGCTC 2 cut(s) 157, 213
Eco57I CTGAAG 2 cut(s) 710, 1889
EcoICRI GAGCTC 2 cut(s) 157, 213
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRII CCWGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
EcoT14I CCWWGG 3 cut(s) 740, 1152, 1609
EcoT38I GRGCYC 2 cut(s) 159, 215
ErhI CCWWGG 3 cut(s) 740, 1152, 1609
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 1333, 1365
FaqI GGGAC 1 cut(s) 744
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 3 cut(s) 558, 678, 1579
FblI GTMKAC 1 cut(s) 1549
Fnu4HI GCNGC 9 cut(s) 276, 279, 759, 1076, 1487, 1758, 1761, 1782, 2006
FokI GGATG 2 cut(s) 238, 2000
FriOI GRGCYC 2 cut(s) 159, 215
Fsp4HI GCNGC 9 cut(s) 276, 279, 759, 1076, 1487, 1758, 1761, 1782, 2006
GlaI GCGC 3 cut(s) 132, 1280, 1689
GluI GCNGC 9 cut(s) 276, 279, 759, 1076, 1487, 1758, 1761, 1782, 2006
GsaI CCCAGC 2 cut(s) 1197, 1279
GsuI CTGGAG 2 cut(s) 264, 2052
HaeII RGCGCY 2 cut(s) 1282, 1691
HaeIII GGCC 4 cut(s) 444, 1016, 1769, 1910
HapII CCGG 3 cut(s) 134, 581, 1628
HhaI GCGC 3 cut(s) 133, 1281, 1690
Hin6I GCGC 3 cut(s) 131, 1279, 1688
HinP1I GCGC 3 cut(s) 131, 1279, 1688
HincII GTYRAC 1 cut(s) 1256
HindII GTYRAC 1 cut(s) 1256
HindIII AAGCTT 1 cut(s) 392
HpaII CCGG 3 cut(s) 134, 581, 1628
HphI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1462
Hpy166II GTNNAC 4 cut(s) 329, 1256, 1550, 1670
Hpy188III TCNNGA 7 cut(s) 185, 243, 861, 1338, 1655, 1775, 1810
Hpy8I GTNNAC 4 cut(s) 329, 1256, 1550, 1670
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 6 cut(s) 1041, 1114, 1701, 1739, 1846, 1864
HpyCH4III ACNGT 4 cut(s) 365, 604, 1268, 1752
HpyCH4IV ACGT 2 cut(s) 371, 800
HpyF10VI GCNNNNNNNGC 2 cut(s) 1075, 1766
HpyF3I CTNAG 9 cut(s) 55, 66, 186, 216, 537, 1282, 1403, 1492, 1558
HpySE526I ACGT 2 cut(s) 371, 800
HspAI GCGC 3 cut(s) 131, 1279, 1688
KroI GCCGGC 1 cut(s) 133
KroNI GCCGGC 1 cut(s) 135
Kzo9I GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
LmnI GCTCC 5 cut(s) 187, 210, 742, 1123, 2002
Lsp1109I GCAGC 7 cut(s) 770, 1087, 1498, 1744, 1747, 1768, 1992
LweI GCATC 5 cut(s) 118, 637, 1031, 1206, 1322
MaeII ACGT 2 cut(s) 371, 800
MaeIII GTNAC 5 cut(s) 402, 506, 596, 1450, 1863
MalI GATC 8 cut(s) 428, 672, 687, 983, 1114, 1186, 1374, 1678
MboI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
MfeI CAATTG 1 cut(s) 1320
MflI RGATCY 2 cut(s) 426, 1112
MhlI GDGCHC 4 cut(s) 159, 215, 354, 2113
MlsI TGGCCA 2 cut(s) 1016, 1769
MluNI TGGCCA 2 cut(s) 1016, 1769
MlyI GAGTC 6 cut(s) 116, 970, 1186, 1367, 1838, 2031
MmeI TCCRAC 2 cut(s) 463, 771
Mox20I TGGCCA 2 cut(s) 1016, 1769
MroNI GCCGGC 1 cut(s) 133
MroXI GAANNNNTTC 2 cut(s) 2070, 2129
MscI TGGCCA 2 cut(s) 1016, 1769
MseI TTAA 5 cut(s) 422, 626, 698, 1446, 2079
MslI CAYNNNNRTG 2 cut(s) 700, 1608
Msp20I TGGCCA 2 cut(s) 1016, 1769
MspI CCGG 3 cut(s) 134, 581, 1628
MspR9I CCNGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
MunI CAATTG 1 cut(s) 1320
Mva1269I GAATGC 3 cut(s) 551, 2008, 2048
MvaI CCWGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
MwoI GCNNNNNNNGC 2 cut(s) 1075, 1766
NaeI GCCGGC 1 cut(s) 135
NcoI CCATGG 2 cut(s) 1152, 1609
NdeI CATATG 3 cut(s) 558, 678, 1579
NdeII GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
NgoMIV GCCGGC 1 cut(s) 133
NheI GCTAGC 1 cut(s) 1879
NlaIV GGNNCC 4 cut(s) 732, 925, 1114, 1125
NmuCI GTSAC 4 cut(s) 402, 506, 596, 1450
NspI RCATGY 4 cut(s) 438, 971, 1073, 1921
NspV TTCGAA 1 cut(s) 1587
PaeI GCATGC 2 cut(s) 438, 971
PciI ACATGT 1 cut(s) 1917
PctI GAATGC 3 cut(s) 551, 2008, 2048
PdiI GCCGGC 1 cut(s) 135
PdmI GAANNNNTTC 2 cut(s) 2070, 2129
PfeI GAWTC 4 cut(s) 59, 317, 1517, 1643
PflMI CCANNNNNTGG 1 cut(s) 451
PfoI TCCNGGA 2 cut(s) 809, 1115
PinAI ACCGGT 1 cut(s) 580
PkrI GCNGC 9 cut(s) 277, 280, 760, 1077, 1488, 1759, 1762, 1783, 2007
PleI GAGTC 6 cut(s) 116, 970, 1185, 1366, 1838, 2030
PpsI GAGTC 6 cut(s) 116, 970, 1185, 1366, 1838, 2030
Ppu21I YACGTR 1 cut(s) 372
PpuMI RGGWCCY 1 cut(s) 1202
PscI ACATGT 1 cut(s) 1917
PshBI ATTAAT 1 cut(s) 626
Psp124BI GAGCTC 2 cut(s) 159, 215
Psp5II RGGWCCY 1 cut(s) 1202
Psp6I CCWGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
PspFI CCCAGC 2 cut(s) 1193, 1275
PspGI CCWGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
PspN4I GGNNCC 4 cut(s) 732, 925, 1114, 1125
PspPI GGNCC 4 cut(s) 442, 731, 744, 1202
PspPPI RGGWCCY 1 cut(s) 1202
PstI CTGCAG 2 cut(s) 1525, 1786
PstNI CAGNNNCTG 2 cut(s) 62, 1847
PsuI RGATCY 2 cut(s) 426, 1112
RsaI GTAC 5 cut(s) 345, 592, 1146, 1527, 1703
RsaNI GTAC 5 cut(s) 344, 591, 1145, 1526, 1702
RseI CAYNNNNRTG 2 cut(s) 700, 1608
SacI GAGCTC 2 cut(s) 159, 215
SaqAI TTAA 5 cut(s) 422, 626, 698, 1446, 2079
SatI GCNGC 9 cut(s) 276, 279, 759, 1076, 1487, 1758, 1761, 1782, 2006
Sau3AI GATC 8 cut(s) 426, 670, 685, 981, 1112, 1184, 1372, 1676
Sau96I GGNCC 4 cut(s) 442, 731, 744, 1202
ScaI AGTACT 1 cut(s) 1146
SchI GAGTC 6 cut(s) 116, 970, 1186, 1367, 1838, 2031
ScrFI CCNGG 7 cut(s) 460, 479, 501, 811, 1117, 1206, 1674
SduI GDGCHC 4 cut(s) 159, 215, 354, 2113
SfaNI GCATC 5 cut(s) 118, 637, 1031, 1206, 1322
SfcI CTRYAG 4 cut(s) 603, 1521, 1782, 2057
SfuI TTCGAA 1 cut(s) 1587
SinI GGWCC 3 cut(s) 731, 744, 1202
SmiMI CAYNNNNRTG 2 cut(s) 700, 1608
SmlI CTYRAG 4 cut(s) 1001, 1808, 1952, 1973
SmoI CTYRAG 4 cut(s) 1001, 1808, 1952, 1973
SphI GCATGC 2 cut(s) 438, 971
SsiI CCGC 4 cut(s) 262, 275, 278, 971
SspI AATATT 1 cut(s) 1709
SstI GAGCTC 2 cut(s) 159, 215
StyD4I CCNGG 7 cut(s) 458, 477, 499, 809, 1115, 1204, 1672
StyI CCWWGG 3 cut(s) 740, 1152, 1609
TaaI ACNGT 4 cut(s) 365, 604, 1268, 1752
TaiI ACGT 2 cut(s) 374, 803
TaqI TCGA 5 cut(s) 159, 1183, 1371, 1587, 1774
TatI WGTACW 3 cut(s) 343, 1144, 1525
TauI GCSGC 2 cut(s) 278, 281
TfiI GAWTC 4 cut(s) 59, 317, 1517, 1643
Tru1I TTAA 5 cut(s) 422, 626, 698, 1446, 2079
Tru9I TTAA 5 cut(s) 422, 626, 698, 1446, 2079
TscAI CASTG 3 cut(s) 173, 541, 607
TseFI GTSAC 4 cut(s) 402, 506, 596, 1450
TseI GCWGC 7 cut(s) 758, 1075, 1486, 1757, 1760, 1781, 2005
Tsp45I GTSAC 4 cut(s) 402, 506, 596, 1450
TspDTI ATGAA 7 cut(s) 41, 704, 1179, 1406, 1485, 1922, 2063
TspGWI ACGGA 2 cut(s) 162, 673
TspRI CASTG 3 cut(s) 173, 541, 607
Van91I CCANNNNNTGG 1 cut(s) 451
VpaK11BI GGWCC 3 cut(s) 731, 744, 1202
VspI ATTAAT 1 cut(s) 626
XapI RAATTY 1 cut(s) 513
XceI RCATGY 4 cut(s) 438, 971, 1073, 1921
XmiI GTMKAC 1 cut(s) 1549
XmnI GAANNNNTTC 2 cut(s) 2070, 2129
ZrmI AGTACT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.