FvH4_4g17510

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0010980
Physical Location & Seq
Forward (+)
21461835 .. 21467252
5418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g17510.t3

Sequence Viewer

Length: 2130 bp
ATGTTCGGTTTTTCTCGCAAACGCATGAAGATTGGACGATTGAAAGTCCAGCTCTCAGATTCTACTCAGGGAACTAGAAGCCCCATAAGACAGCCGAAACGAAATAACAGCTCCAATAATGACTCTGATGCGCCAGCAAGTAGTCTTTCTGATGAGCTTGATTGCCAGTGTCCTTCTGCTCCTGAGATTAGTAATTCCACAATGGGGAGCTCCGAGAATTGGATGGTGTTGTCGATTTCTGGAGACAAGCCTAAGCCCCGATTCAATCATGCGGCGGCTGTAATTGGGAATAAGATGATAGTGGTTGGTGGTGAATCAGGGAGTGAACTGCTAGACGATGTACAGGTGCTCAATTTTGACAGTTTTACATGGACCACAGCGTTGTCAAAGCTTTACTTGTCACCAAGCAGTCTGCCCTTAAAGATCCCTGCATGCAAGGGCCACAAACTGGTTTCCTGGGGGAAAAAGGCACTCCTGGTTGGAGGAAAGACTGAACCTGGGAGTGACAAAATTTCAGTTTGGGCATTTGACACTGAGACAGAATGCTGGTCTCATATGGAAGCAAAGGGTGATATACCGGTTGCTCGTACCGGTCACACTGTAGTCAGGGCAAGTTCTGTATTGATCCTTTTTGGTGGTGAAGATGCTAAAAGAAAAAAACTGCATGATCTACATATGTTTGATCTGAAGTCATTGACATGGCTACCTCTTCATTGCACAGGAACGGGACCATCTCCGAGGTCCAACCATGTGGCAGCTCTTTATGATGACAAAACTCTTTTTGTATTTGGAGGCACATCAAAATCCAAGACTTTGAATGATTTGTATTCACTTGACTTTGAAACGATGGTATGGTCAAGAATAAAAAAGCGAGGTTTCCATCCATCACCTAGAGCTGGTTGCTGTGGAGTCCTGTGTGGAACCAAATGGTATATTGTTGGTGGTGGAAGCAGAAAAAAAAGACATGCGGAGACTCTGATCTTTGATGTTTTGAAACTTGTGTGGTCGTTGGCCATTGCATCGCCTCCGTCTACAATCACTACCAATAAGGGTTTCAGCCTAGAGCATGTGCAGCACAAAGAAAAGGATTTTCTTGTTGCTTTTGGGGGATCCAGAAAGGAGCCATCAAATCAGGTTGAAGTACTAACCATGGAAAAGAATGAATTATCTACGAGTCGTCGATCTTTTCCCAGCAAAGGACCTGGAACTTTGCTGCCTGAAAAACTCCCATCATCAAATGGCTTGGCTAGTCAACTAACTAATGGTTCTTCCCAGCGCTCAGTCAATTCAGTTACTAGACAAAATCTGGCATCTGCAATCGAACAACATGGCTCTGGAAGAAAATCCTTGTCAGAATCCTTGCTTGTCGATGCAAATCCTGTTCCTGGTAACGTGTCACTTCGGAAACAATTTCATAATGACGAAGAATACAACACTGCTGTTAAGGTGACAAAGGGTTCAGAAGATGAAAGTTCTCTCTTGCAGCCCTCGGAAAAGAAAAATAGTCAATCTGAATCAGCAGTACAAACTAACATTCATGGAGGTAGACTTTACTCAGAGGACATTCTCTCTGCATATGAGTTCGAAAACTCAAATCACAACCATGGACTTGGGAACTTTCCAGTTGACAACAATGATGCCTTATTTCCAGAAAGTGATGGAAAACCAGGAGCACTATCAGCGCCTTCAAGTATGTACCAATATTATGAGAAACTAATAAGAAAGAATGGGGTTTTAGAAGGACAGTTGGCTGCTGCATTGGCCAGTCGAGAAGCTGCAGAGAAAAACTTATCCTCTGCTCTCAAGAGCCGACAGGAGATTGAGAAAAAATTAGCAGACTCTGGGAAGGAGATAGAGTTGCTGAAGGACAAGCTAGCTGGTGTAGAACTTGCCCAAGAAGAGGCTAACAACCTCTCAAGTATTGTTCATTCCGACAATGTGAGGCTTGAGCATGATGTGGCTTTCCTCAAGGCTGTTTTGGATGATACCCAGAAGGAGCTGCATTCAACTAGAGGAGTTCTAGCTGGAGAACGAGCAAGGGCATTCCAGCTCCAGGTTGAAGTTTTTCATCTTAAACAAAGACTACAATCGATGGAGAACCGAGCACCTACACCAAGAAAACCATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_1 Kelch_4 Kelch_5

Protein Analysis

710

Amino Acids

77.65

Weight (kDa)

8.87

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 71 - 126 1.9e-11 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 71 - 127 7.7e-10 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 71 - 202 1.5e-11 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 76 - 316 7.4e-26 Host cell factor, Kelch-repeats domain
Kelch_1 PF01344 86 - 126 7.3e-08 Kelch motif
Beta-prop_FBX42 PF13415 145 - 268 1.5e-23 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 147 - 353 3.4e-59 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_TYW4 PF13418 148 - 215 1.7e-06 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 159 - 268 1.3e-14 Attractin/LZTR1 beta-propeller
Beta-prop_TYW4 PF13418 193 - 359 3.6e-08 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 209 - 380 1.1e-19 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 250 - 391 2.8e-18 FBX42, beta-propeller domain
ACBP4_C PF24922 642 - 699 1.3e-09 Acyl-CoA-binding domain-containing protein 4-6, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18590 AT5G18590
fragaria_vesca FvH4_4g17510 FvH4_4g17510 FvH4_4g17510
malus_domestica MD16G1173400.v1.1
prunus_persica Prupe.1G140300_v2.0.a1 Prupe.1G140300_v2.0.a1
pyrus_communis pycom16g14540
rosa_chinensis RchiOBHm_Chr4g0421431
rosa_laevigata RLG00000007685
rosa_multiflora Rmu_sc0001962.1_g000012
rosa_roxburghii Rroxscaffold_5G00363700
rosa_rugosa Rorug04G0171000 Rorug04G0171100
rosa_samantha Rh4AG231800 Rh4BG234700 Rh4CG246300 Rh4DG230300
rosa_wichuraiana Rw4G020230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 448
AccI GTMKAC 2 cut(s) 1031, 1546
AciI CCGC 3 cut(s) 272, 275, 968
AclWI GGATC 4 cut(s) 418, 619, 1104, 1117
AcoI YGGCCR 2 cut(s) 1011, 1761
AcsI RAATTY 1 cut(s) 510
AcuI CTGAAG 2 cut(s) 707, 1883
AfaI GTAC 5 cut(s) 342, 589, 1143, 1524, 1697
AfeI AGCGCT 1 cut(s) 1277
AfiI CCNNNNNNNGG 8 cut(s) 204, 219, 448, 896, 1196, 1385, 1900, 2053
AflIII ACRYGT 1 cut(s) 1392
AgeI ACCGGT 2 cut(s) 577, 590
AgsI TTSAA 9 cut(s) 43, 265, 817, 842, 994, 1139, 1689, 2007, 2060
AjnI CCWGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
AjuI GAANNNNNNNTTGG 2 cut(s) 1037, 1069
Alw21I GWGCWC 4 cut(s) 212, 351, 1675, 2107
Alw26I GTCTC 4 cut(s) 237, 530, 555, 965
AlwI GGATC 4 cut(s) 418, 619, 1104, 1117
AlwNI CAGNNNCTG 1 cut(s) 1841
Aor51HI AGCGCT 1 cut(s) 1277
AoxI GGCC 3 cut(s) 439, 1011, 1761
ApeKI GCWGC 8 cut(s) 755, 1072, 1213, 1483, 1751, 1754, 1775, 1999
ApoI RAATTY 1 cut(s) 510
AsiGI ACCGGT 2 cut(s) 577, 590
Asp700I GAANNNNTTC 1 cut(s) 2064
AspLEI GCGC 3 cut(s) 133, 1278, 1684
AspS9I GGNCC 5 cut(s) 372, 439, 728, 741, 1199
AsuHPI GGTGA 6 cut(s) 323, 393, 581, 650, 879, 1459
AsuII TTCGAA 1 cut(s) 1584
AsuNHI GCTAGC 1 cut(s) 1873
AvaII GGWCC 4 cut(s) 372, 728, 741, 1199
BalI TGGCCA 2 cut(s) 1013, 1763
BamHI GGATCC 1 cut(s) 1109
BanII GRGCYC 1 cut(s) 212
Bbv12I GWGCWC 4 cut(s) 212, 351, 1675, 2107
BbvI GCAGC 8 cut(s) 767, 1084, 1200, 1495, 1738, 1741, 1762, 1986
BccI CCATC 9 cut(s) 217, 739, 841, 888, 892, 1132, 1237, 1652, 2086
BciT130I CCWGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
BcoDI GTCTC 4 cut(s) 237, 530, 555, 965
BfmI CTRYAG 2 cut(s) 600, 1776
BfoI RGCGCY 2 cut(s) 1279, 1685
BmcAI AGTACT 1 cut(s) 1143
Bme1390I CCNGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
Bme18I GGWCC 4 cut(s) 372, 728, 741, 1199
BmgT120I GGNCC 5 cut(s) 372, 439, 728, 741, 1199
BmiI GGNNCC 4 cut(s) 729, 922, 1111, 1122
BmrFI CCNGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
BmsI GCATC 6 cut(s) 118, 634, 1028, 1319, 1360, 1627
BmtI GCTAGC 1 cut(s) 1877
BpmI CTGGAG 3 cut(s) 261, 2036, 2046
Bpu10I CCTNAGC 1 cut(s) 252
Bpu14I TTCGAA 1 cut(s) 1584
BpuEI CTTGAG 4 cut(s) 1787, 1900, 1952, 1967
Bsa29I ATCGAT 1 cut(s) 2090
BsaBI GATNNNNATC 1 cut(s) 1374
BsaI GGTCTC 1 cut(s) 555
BsaJI CCNNGG 6 cut(s) 456, 497, 737, 1149, 1488, 1603
BsaWI WCCGGW 2 cut(s) 577, 590
BsaXI ACNNNNNCTCC 2 cut(s) 1841, 1871
Bsc4I CCNNNNNNNGG 8 cut(s) 204, 219, 448, 896, 1196, 1385, 1900, 2053
Bse118I RCCGGY 2 cut(s) 577, 590
Bse1I ACTGG 4 cut(s) 166, 453, 1622, 1764
Bse3DI GCAATG 2 cut(s) 712, 1014
Bse8I GATNNNNATC 1 cut(s) 1374
BseBI CCWGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
BseCI ATCGAT 1 cut(s) 2090
BseDI CCNNGG 6 cut(s) 456, 497, 737, 1149, 1488, 1603
BseGI GGATG 3 cut(s) 228, 880, 1987
BseJI GATNNNNATC 1 cut(s) 1374
BseLI CCNNNNNNNGG 8 cut(s) 204, 219, 448, 896, 1196, 1385, 1900, 2053
BseMI GCAATG 2 cut(s) 712, 1014
BseMII CTCAG 6 cut(s) 69, 80, 174, 525, 1293, 1569
BseNI ACTGG 4 cut(s) 166, 453, 1622, 1764
BseRI GAGGAG 1 cut(s) 2028
BseXI GCAGC 8 cut(s) 767, 1084, 1200, 1495, 1738, 1741, 1762, 1986
BseYI CCCAGC 2 cut(s) 1190, 1272
BsgI GTGCAG 1 cut(s) 1091
BshFI GGCC 3 cut(s) 441, 1013, 1763
BshTI ACCGGT 2 cut(s) 577, 590
BshVI ATCGAT 1 cut(s) 2090
BsiHKAI GWGCWC 4 cut(s) 212, 351, 1675, 2107
BsiSI CCGG 2 cut(s) 578, 591
BslFI GGGAC 1 cut(s) 741
BslI CCNNNNNNNGG 8 cut(s) 204, 219, 448, 896, 1196, 1385, 1900, 2053
BsmAI GTCTC 4 cut(s) 237, 530, 555, 965
BsmFI GGGAC 1 cut(s) 741
BsmI GAATGC 3 cut(s) 548, 2002, 2042
BsnI GGCC 3 cut(s) 441, 1013, 1763
Bso31I GGTCTC 1 cut(s) 555
Bsp119I TTCGAA 1 cut(s) 1584
Bsp1286I GDGCHC 4 cut(s) 212, 351, 1675, 2107
Bsp1407I TGTACA 1 cut(s) 340
Bsp143I GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
Bsp19I CCATGG 2 cut(s) 1149, 1603
BspACI CCGC 3 cut(s) 272, 275, 968
BspANI GGCC 3 cut(s) 441, 1013, 1763
BspCNI CTCAG 6 cut(s) 68, 79, 175, 526, 1292, 1568
BspDI ATCGAT 1 cut(s) 2090
BspLI GGNNCC 4 cut(s) 729, 922, 1111, 1122
BspMAI CTGCAG 1 cut(s) 1780
BspOI GCTAGC 1 cut(s) 1877
BspPI GGATC 4 cut(s) 418, 619, 1104, 1117
BspT104I TTCGAA 1 cut(s) 1584
BspTNI GGTCTC 1 cut(s) 555
BsrDI GCAATG 2 cut(s) 712, 1014
BsrFI RCCGGY 2 cut(s) 577, 590
BsrGI TGTACA 1 cut(s) 340
BsrI ACTGG 4 cut(s) 166, 453, 1622, 1764
BssAI RCCGGY 2 cut(s) 577, 590
BssECI CCNNGG 6 cut(s) 456, 497, 737, 1149, 1488, 1603
BssMI GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
BssT1I CCWWGG 2 cut(s) 1149, 1603
Bst2UI CCWGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
Bst4CI ACNGT 3 cut(s) 362, 601, 1746
Bst6I CTCTTC 2 cut(s) 714, 1893
BstAUI TGTACA 1 cut(s) 340
BstBI TTCGAA 1 cut(s) 1584
BstC8I GCNNGC 3 cut(s) 135, 433, 1875
BstDEI CTNAG 7 cut(s) 55, 66, 183, 252, 534, 1279, 1555
BstDSI CCRYGG 2 cut(s) 1149, 1603
BstF5I GGATG 3 cut(s) 228, 880, 1987
BstH2I RGCGCY 2 cut(s) 1279, 1685
BstHHI GCGC 3 cut(s) 133, 1278, 1684
BstKTI GATC 7 cut(s) 426, 627, 670, 685, 981, 1112, 1184
BstMAI GTCTC 4 cut(s) 237, 530, 555, 965
BstMBI GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
BstMWI GCNNNNNNNGC 3 cut(s) 1072, 1679, 1760
BstNI CCWGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
BstNSI RCATGY 3 cut(s) 435, 968, 1070
BstSCI CCNGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
BstSFI CTRYAG 2 cut(s) 600, 1776
BstV1I GCAGC 8 cut(s) 767, 1084, 1200, 1495, 1738, 1741, 1762, 1986
BstX2I RGATCY 2 cut(s) 423, 1109
BstXI CCANNNNNNTGG 2 cut(s) 751, 1610
BstYI RGATCY 2 cut(s) 423, 1109
Bsu15I ATCGAT 1 cut(s) 2090
BsuRI GGCC 3 cut(s) 441, 1013, 1763
BsuTUI ATCGAT 1 cut(s) 2090
BtgI CCRYGG 2 cut(s) 1149, 1603
BtgZI GCGATG 1 cut(s) 1005
BtsCI GGATG 3 cut(s) 228, 880, 1987
BtsI GCAGTG 1 cut(s) 1434
BtsIMutI CAGTG 4 cut(s) 173, 531, 597, 1434
Cac8I GCNNGC 3 cut(s) 135, 433, 1875
CaiI CAGNNNCTG 1 cut(s) 1841
CfoI GCGC 3 cut(s) 133, 1278, 1684
Cfr10I RCCGGY 2 cut(s) 577, 590
Cfr13I GGNCC 5 cut(s) 372, 439, 728, 741, 1199
ClaI ATCGAT 1 cut(s) 2090
Csp6I GTAC 5 cut(s) 341, 588, 1142, 1523, 1696
CspAI ACCGGT 2 cut(s) 577, 590
CviQI GTAC 5 cut(s) 341, 588, 1142, 1523, 1696
DdeI CTNAG 7 cut(s) 55, 66, 183, 252, 534, 1279, 1555
DpnI GATC 7 cut(s) 425, 626, 669, 684, 980, 1111, 1183
DpnII GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
EaeI YGGCCR 2 cut(s) 1011, 1761
Eam1104I CTCTTC 2 cut(s) 714, 1893
EarI CTCTTC 2 cut(s) 714, 1893
Ecl136II GAGCTC 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 1149, 1603
Eco24I GRGCYC 1 cut(s) 212
Eco31I GGTCTC 1 cut(s) 555
Eco47I GGWCC 4 cut(s) 372, 728, 741, 1199
Eco47III AGCGCT 1 cut(s) 1277
Eco53kI GAGCTC 1 cut(s) 210
Eco57I CTGAAG 2 cut(s) 707, 1883
EcoICRI GAGCTC 1 cut(s) 210
EcoO109I RGGNCCY 1 cut(s) 1199
EcoRII CCWGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
EcoT14I CCWWGG 2 cut(s) 1149, 1603
EcoT38I GRGCYC 1 cut(s) 212
ErhI CCWWGG 2 cut(s) 1149, 1603
FalI AAGNNNNNCTT 2 cut(s) 380, 412
FaqI GGGAC 1 cut(s) 741
FauNDI CATATG 3 cut(s) 555, 675, 1576
FblI GTMKAC 2 cut(s) 1031, 1546
FokI GGATG 3 cut(s) 235, 867, 1994
FriOI GRGCYC 1 cut(s) 212
GlaI GCGC 3 cut(s) 132, 1277, 1683
GsaI CCCAGC 2 cut(s) 1194, 1276
GsuI CTGGAG 3 cut(s) 261, 2036, 2046
HaeII RGCGCY 2 cut(s) 1279, 1685
HaeIII GGCC 3 cut(s) 441, 1013, 1763
HapII CCGG 2 cut(s) 578, 591
HhaI GCGC 3 cut(s) 133, 1278, 1684
Hin6I GCGC 3 cut(s) 131, 1276, 1682
HinP1I GCGC 3 cut(s) 131, 1276, 1682
HincII GTYRAC 2 cut(s) 1253, 1627
HindII GTYRAC 2 cut(s) 1253, 1627
HindIII AAGCTT 1 cut(s) 389
HpaII CCGG 2 cut(s) 578, 591
HphI GGTGA 6 cut(s) 323, 393, 581, 650, 879, 1459
Hpy166II GTNNAC 5 cut(s) 326, 1032, 1253, 1547, 1627
Hpy188III TCNNGA 8 cut(s) 182, 240, 858, 1113, 1335, 1649, 1769, 1804
Hpy8I GTNNAC 5 cut(s) 326, 1032, 1253, 1547, 1627
Hpy99I CGWCG 1 cut(s) 1182
HpyAV CCTTC 6 cut(s) 183, 1695, 1733, 1840, 1858, 1987
HpyCH4III ACNGT 3 cut(s) 362, 601, 1746
HpyCH4IV ACGT 1 cut(s) 1392
HpyF10VI GCNNNNNNNGC 3 cut(s) 1072, 1679, 1760
HpyF3I CTNAG 7 cut(s) 55, 66, 183, 252, 534, 1279, 1555
HpySE526I ACGT 1 cut(s) 1392
HspAI GCGC 3 cut(s) 131, 1276, 1682
Kzo9I GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
LmnI GCTCC 8 cut(s) 116, 184, 207, 215, 1120, 1670, 1996, 2055
Lsp1109I GCAGC 8 cut(s) 767, 1084, 1200, 1495, 1738, 1741, 1762, 1986
LweI GCATC 6 cut(s) 118, 634, 1028, 1319, 1360, 1627
MaeII ACGT 1 cut(s) 1392
MaeIII GTNAC 7 cut(s) 399, 503, 593, 1291, 1388, 1395, 1447
MalI GATC 7 cut(s) 425, 626, 669, 684, 980, 1111, 1183
MboI GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
MboII GAAGA 8 cut(s) 40, 653, 701, 1260, 1350, 1436, 1475, 1910
MflI RGATCY 2 cut(s) 423, 1109
MhlI GDGCHC 4 cut(s) 212, 351, 1675, 2107
MlsI TGGCCA 2 cut(s) 1013, 1763
MluCI AATT 9 cut(s) 193, 217, 282, 352, 510, 1163, 1285, 1409, 1829
MluNI TGGCCA 2 cut(s) 1013, 1763
MlyI GAGTC 5 cut(s) 116, 918, 967, 1183, 1832
MmeI TCCRAC 3 cut(s) 460, 768, 1956
Mox20I TGGCCA 2 cut(s) 1013, 1763
MroXI GAANNNNTTC 1 cut(s) 2064
MscI TGGCCA 2 cut(s) 1013, 1763
MseI TTAA 3 cut(s) 419, 1443, 2073
MslI CAYNNNNRTG 2 cut(s) 697, 1602
Msp20I TGGCCA 2 cut(s) 1013, 1763
MspI CCGG 2 cut(s) 578, 591
MspR9I CCNGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
Mva1269I GAATGC 3 cut(s) 548, 2002, 2042
MvaI CCWGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
MwoI GCNNNNNNNGC 3 cut(s) 1072, 1679, 1760
NcoI CCATGG 2 cut(s) 1149, 1603
NdeI CATATG 3 cut(s) 555, 675, 1576
NdeII GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
NheI GCTAGC 1 cut(s) 1873
NlaIV GGNNCC 4 cut(s) 729, 922, 1111, 1122
NmuCI GTSAC 5 cut(s) 399, 503, 593, 1395, 1447
NspI RCATGY 3 cut(s) 435, 968, 1070
NspV TTCGAA 1 cut(s) 1584
PaeI GCATGC 1 cut(s) 435
PctI GAATGC 3 cut(s) 548, 2002, 2042
PdmI GAANNNNTTC 1 cut(s) 2064
PfeI GAWTC 5 cut(s) 59, 261, 314, 1355, 1514
PflMI CCANNNNNTGG 1 cut(s) 448
PinAI ACCGGT 2 cut(s) 577, 590
PleI GAGTC 5 cut(s) 116, 917, 967, 1182, 1832
PpsI GAGTC 5 cut(s) 116, 917, 967, 1182, 1832
PpuMI RGGWCCY 1 cut(s) 1199
Psp124BI GAGCTC 1 cut(s) 212
Psp5II RGGWCCY 1 cut(s) 1199
Psp6I CCWGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
PspFI CCCAGC 2 cut(s) 1190, 1272
PspGI CCWGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
PspN4I GGNNCC 4 cut(s) 729, 922, 1111, 1122
PspPI GGNCC 5 cut(s) 372, 439, 728, 741, 1199
PspPPI RGGWCCY 1 cut(s) 1199
PstI CTGCAG 1 cut(s) 1780
PstNI CAGNNNCTG 1 cut(s) 1841
PsuI RGATCY 2 cut(s) 423, 1109
RsaI GTAC 5 cut(s) 342, 589, 1143, 1524, 1697
RsaNI GTAC 5 cut(s) 341, 588, 1142, 1523, 1696
RseI CAYNNNNRTG 2 cut(s) 697, 1602
SacI GAGCTC 1 cut(s) 212
SaqAI TTAA 3 cut(s) 419, 1443, 2073
Sau3AI GATC 7 cut(s) 423, 624, 667, 682, 978, 1109, 1181
Sau96I GGNCC 5 cut(s) 372, 439, 728, 741, 1199
ScaI AGTACT 1 cut(s) 1143
SchI GAGTC 5 cut(s) 116, 918, 967, 1183, 1832
ScrFI CCNGG 7 cut(s) 457, 476, 498, 1203, 1386, 1668, 2054
SduI GDGCHC 4 cut(s) 212, 351, 1675, 2107
SfaNI GCATC 6 cut(s) 118, 634, 1028, 1319, 1360, 1627
SfcI CTRYAG 2 cut(s) 600, 1776
SfuI TTCGAA 1 cut(s) 1584
SinI GGWCC 4 cut(s) 372, 728, 741, 1199
SmiMI CAYNNNNRTG 2 cut(s) 697, 1602
SmlI CTYRAG 4 cut(s) 1802, 1915, 1946, 1967
SmoI CTYRAG 4 cut(s) 1802, 1915, 1946, 1967
SphI GCATGC 1 cut(s) 435
Sse9I AATT 9 cut(s) 193, 217, 282, 352, 510, 1163, 1285, 1409, 1829
SsiI CCGC 3 cut(s) 272, 275, 968
SspI AATATT 1 cut(s) 1703
SstI GAGCTC 1 cut(s) 212
StyD4I CCNGG 7 cut(s) 455, 474, 496, 1201, 1384, 1666, 2052
StyI CCWWGG 2 cut(s) 1149, 1603
TaaI ACNGT 3 cut(s) 362, 601, 1746
TaiI ACGT 1 cut(s) 1395
TaqI TCGA 7 cut(s) 233, 1180, 1320, 1368, 1584, 1768, 2090
TasI AATT 9 cut(s) 193, 217, 282, 352, 510, 1163, 1285, 1409, 1829
TatI WGTACW 3 cut(s) 340, 1141, 1522
TauI GCSGC 2 cut(s) 275, 278
TfiI GAWTC 5 cut(s) 59, 261, 314, 1355, 1514
Tru1I TTAA 3 cut(s) 419, 1443, 2073
Tru9I TTAA 3 cut(s) 419, 1443, 2073
TscAI CASTG 4 cut(s) 173, 538, 604, 1441
TseFI GTSAC 5 cut(s) 399, 503, 593, 1395, 1447
TseI GCWGC 8 cut(s) 755, 1072, 1213, 1483, 1751, 1754, 1775, 1999
Tsp45I GTSAC 5 cut(s) 399, 503, 593, 1395, 1447
TspDTI ATGAA 8 cut(s) 41, 701, 1176, 1403, 1482, 1526, 1916, 2057
TspGWI ACGGA 1 cut(s) 1017
TspRI CASTG 4 cut(s) 173, 538, 604, 1441
Van91I CCANNNNNTGG 1 cut(s) 448
VpaK11BI GGWCC 4 cut(s) 372, 728, 741, 1199
XapI RAATTY 1 cut(s) 510
XceI RCATGY 3 cut(s) 435, 968, 1070
XmiI GTMKAC 2 cut(s) 1031, 1546
XmnI GAANNNNTTC 1 cut(s) 2064
ZrmI AGTACT 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.