Rh4BG234700

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0010980
Physical Location & Seq
Forward (+)
40072204 .. 40077560
5357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG234700.1

Sequence Viewer

Length: 1512 bp
ATGTTCGGTTTTTCTCGCAAACGTATGAAGATTGGACGATTGAAAGTCCAGCTCTCAGATTCTGCTCAGGGAACTAGAAGCCCCATAAGACAGCCGAAACGAAATAACAGCTTCAATAATGACTCTGATGCGCCGGCAAGTAGTATTTCTGAAGAGCTCGATTGCCAGTGTCCGTCTTCTGCTCCTGAGATTAGTAATTCCACAATGGGGAGCTCTGAGAATTGGATGGTGTTGTCAATTTCTGGAGACAAGCCTACGCCCCGCTTCAATCATGCGGCGGCTGTAATTGGGAATAAGATGATAGTGGTTGGTGGTGAAACTGGGAGTGAACTGCTAGATGATGTACAGGTGCTCAATTTTGACAGTTTTATGTGGAACACAGCTTCGTCAAAGCTTTACTTGTCACCAAGCAGTCTGCCCTTAAAGATCCCTGCATGCAAGGGCCACAGACTGGTTTCCTGGGGGAAAAAGGCACTCCTGGTTGGAGGAAAGACTGAACCTGGGAGTGACAAAATTTCAGTTTGGGCATTTGACACTGAGACAGAATGCTGGTCTCATATGGAAGCAAAGGGTGATATACCGGTTGCTCGTACTGGTCACACTGTAGTCAGGGCAAGTTCTGTATTAATCCTTTTTGGTGGTGAAGATGCTAAAAGAAGGAAACTGCATGATCTACATATGTTTGATCTGAAGTCATTAACATGGCTACCTCTTCATTGCACAGGAACAGGACCATCTCCGAGGTCCAACCATGTGGCAGCTCTTTATGATGACAAAACTCTTTTTATATTTGGAGGCACGTCAAAATCCAGGACTTTGAATGATTTATATTCGCTTGACTTTGAAACGATGGTATGGTCAAGAATAAAGAAGCGAGGTTTCCATCCATCACCTAGAGCTGGTTGCTGTGGGGTCTTATGTGGAACCAAATGGTATATCGTTGGTGGTGGAAGCAGAAAAAAACGACATGCGGAGACTCTGATCTTTGATGTTTTGAAACTTGAGTGGTCATTGGCCATTGCATCGCCTCCTTCTACAATCACTACGAATAAGGGTTTCAGCCTAGAGCATGTGCAGCACAAAGAAAAGGATTTTCTTGTTGCTTTTGGGGGATCCAGAAAGGAGCCATCAAATCAGGTTGAAGTACTAACCATGGAAAAGAATGAATTATCCACGAGTCGTCGATCTTTTCCCAACAAAGGACCTGGAACTTTGATGCCTGAAAAACGCCCATCAACCAATGGCTTGGCTAGTCAACTAACTAATGGTTCTTCCCAGCGCTCAGTCAATTCAGCTAGACAAAATCTGGCATCTGCAATTGAACAACATGGTTCTGGAAGAAAATCTTTGTCAGAGTCCTTGCTTGTCGATCCAAATCCTGTTTCTGGTAACGTCTCACTTAGGAAACAATTTCATAATGACGAAGAATACAACACTGCTGTTAAGGTGACAAAGGGTTCAGAAGATGAAAGTTCTCTCTTGCAGGTAAATTGCAGAATTTTTGTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kelch_1 Kelch_4 Kelch_5

Protein Analysis

503

Amino Acids

55.21

Weight (kDa)

9.3

Isoelectric Point (pI)

47.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 72 - 129 4.5e-11 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 72 - 131 1.5e-09 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 72 - 203 8.8e-12 Attractin/LZTR1 beta-propeller
Kelch_HCF PF13854 76 - 318 2e-26 Host cell factor, Kelch-repeats domain
Kelch_1 PF01344 87 - 127 2.1e-06 Kelch motif
Beta-prop_FBX42 PF13415 146 - 269 1.3e-23 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 148 - 354 2.1e-59 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_TYW4 PF13418 149 - 371 6.1e-13 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 160 - 293 1.6e-19 Attractin/LZTR1 beta-propeller
Beta-prop_TYW4 PF13418 194 - 386 3e-08 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 210 - 380 3.6e-20 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 251 - 392 2.1e-18 FBX42, beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010980)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G18590 AT5G18590
fragaria_vesca FvH4_4g17510 FvH4_4g17510 FvH4_4g17510
malus_domestica MD16G1173400.v1.1
prunus_persica Prupe.1G140300_v2.0.a1 Prupe.1G140300_v2.0.a1
pyrus_communis pycom16g14540
rosa_chinensis RchiOBHm_Chr4g0421431
rosa_laevigata RLG00000007685
rosa_multiflora Rmu_sc0001962.1_g000012
rosa_roxburghii Rroxscaffold_5G00363700
rosa_rugosa Rorug04G0171000 Rorug04G0171100
rosa_samantha Rh4AG231800 Rh4BG234700 Rh4CG246300 Rh4DG230300
rosa_wichuraiana Rw4G020230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1474
AccB7I CCANNNNNTGG 1 cut(s) 451
AciI CCGC 4 cut(s) 262, 275, 278, 971
AclWI GGATC 4 cut(s) 421, 1107, 1120, 1364
AcoI YGGCCR 1 cut(s) 1014
AcsI RAATTY 2 cut(s) 513, 1497
AcuI CTGAAG 2 cut(s) 171, 710
AfaI GTAC 3 cut(s) 345, 592, 1146
AfeI AGCGCT 1 cut(s) 1280
AfiI CCNNNNNNNGG 5 cut(s) 207, 451, 899, 1199, 1385
AgeI ACCGGT 1 cut(s) 580
AgsI TTSAA 8 cut(s) 43, 115, 268, 820, 845, 997, 1142, 1322
AjiI CACGTC 1 cut(s) 801
AjnI CCWGG 5 cut(s) 458, 477, 499, 809, 1204
AjuI GAANNNNNNNTTGG 2 cut(s) 1366, 1398
AluBI AGCT 9 cut(s) 52, 111, 157, 213, 383, 394, 761, 899, 1295
AluI AGCT 9 cut(s) 52, 111, 157, 213, 383, 394, 761, 899, 1295
Alw21I GWGCWC 3 cut(s) 159, 215, 354
Alw26I GTCTC 5 cut(s) 240, 533, 558, 968, 1399
AlwI GGATC 4 cut(s) 421, 1107, 1120, 1364
AlwNI CAGNNNCTG 1 cut(s) 62
Aor51HI AGCGCT 1 cut(s) 1280
AoxI GGCC 2 cut(s) 442, 1014
ApeKI GCWGC 2 cut(s) 758, 1075
ApoI RAATTY 2 cut(s) 513, 1497
AseI ATTAAT 1 cut(s) 626
AsiGI ACCGGT 1 cut(s) 580
AspLEI GCGC 2 cut(s) 133, 1281
AspS9I GGNCC 4 cut(s) 442, 731, 744, 1202
AsuHPI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1459
AvaII GGWCC 3 cut(s) 731, 744, 1202
BalI TGGCCA 1 cut(s) 1016
BamHI GGATCC 1 cut(s) 1112
BanII GRGCYC 2 cut(s) 159, 215
BauI CACGAG 1 cut(s) 1174
BbsI GAAGAC 1 cut(s) 168
Bbv12I GWGCWC 3 cut(s) 159, 215, 354
BbvI GCAGC 2 cut(s) 770, 1087
BccI CCATC 7 cut(s) 220, 742, 844, 891, 895, 1135, 1240
BciT130I CCWGG 5 cut(s) 460, 479, 501, 811, 1206
BcoDI GTCTC 5 cut(s) 240, 533, 558, 968, 1399
BfaI CTAG 6 cut(s) 75, 335, 894, 1064, 1251, 1296
BfmI CTRYAG 1 cut(s) 603
BfoI RGCGCY 1 cut(s) 1282
BfuAI ACCTGC 1 cut(s) 1474
BisI GCNGC 4 cut(s) 276, 279, 759, 1076
BlsI GCNGC 4 cut(s) 277, 280, 760, 1077
BmcAI AGTACT 1 cut(s) 1146
Bme1390I CCNGG 5 cut(s) 460, 479, 501, 811, 1206
Bme18I GGWCC 3 cut(s) 731, 744, 1202
BmgBI CACGTC 1 cut(s) 801
BmgT120I GGNCC 4 cut(s) 442, 731, 744, 1202
BmiI GGNNCC 3 cut(s) 925, 1114, 1125
BmrFI CCNGG 5 cut(s) 460, 479, 501, 811, 1206
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
BmuI ACTGGG 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 168
BpmI CTGGAG 1 cut(s) 264
Bpu10I CCTNAGC 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 1022
BsaBI GATNNNNATC 1 cut(s) 1374
BsaI GGTCTC 1 cut(s) 558
BsaJI CCNNGG 4 cut(s) 459, 500, 740, 1152
BsaWI WCCGGW 1 cut(s) 580
Bsc4I CCNNNNNNNGG 5 cut(s) 207, 451, 899, 1199, 1385
Bse118I RCCGGY 2 cut(s) 133, 580
Bse1I ACTGG 4 cut(s) 166, 325, 456, 598
Bse3DI GCAATG 2 cut(s) 715, 1017
Bse8I GATNNNNATC 1 cut(s) 1374
BseBI CCWGG 5 cut(s) 460, 479, 501, 811, 1206
BseDI CCNNGG 4 cut(s) 459, 500, 740, 1152
BseGI GGATG 2 cut(s) 231, 883
BseJI GATNNNNATC 1 cut(s) 1374
BseLI CCNNNNNNNGG 5 cut(s) 207, 451, 899, 1199, 1385
BseMI GCAATG 2 cut(s) 715, 1017
BseMII CTCAG 6 cut(s) 69, 80, 177, 207, 528, 1296
BseNI ACTGG 4 cut(s) 166, 325, 456, 598
BseXI GCAGC 2 cut(s) 770, 1087
BseYI CCCAGC 1 cut(s) 1275
BsgI GTGCAG 1 cut(s) 1094
BshFI GGCC 2 cut(s) 444, 1016
BshTI ACCGGT 1 cut(s) 580
BsiHKAI GWGCWC 3 cut(s) 159, 215, 354
BsiSI CCGG 2 cut(s) 134, 581
BslI CCNNNNNNNGG 5 cut(s) 207, 451, 899, 1199, 1385
BsmAI GTCTC 5 cut(s) 240, 533, 558, 968, 1399
BsmBI CGTCTC 1 cut(s) 1399
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 2 cut(s) 444, 1016
Bso31I GGTCTC 1 cut(s) 558
Bsp1286I GDGCHC 3 cut(s) 159, 215, 354
Bsp1407I TGTACA 1 cut(s) 343
Bsp143I GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 4 cut(s) 262, 275, 278, 971
BspANI GGCC 2 cut(s) 444, 1016
BspCNI CTCAG 6 cut(s) 68, 79, 178, 208, 529, 1295
BspLI GGNNCC 3 cut(s) 925, 1114, 1125
BspMI ACCTGC 1 cut(s) 1474
BspPI GGATC 4 cut(s) 421, 1107, 1120, 1364
BspQI GCTCTTC 1 cut(s) 147
BspTNI GGTCTC 1 cut(s) 558
BsrDI GCAATG 2 cut(s) 715, 1017
BsrFI RCCGGY 2 cut(s) 133, 580
BsrGI TGTACA 1 cut(s) 343
BsrI ACTGG 4 cut(s) 166, 325, 456, 598
BssAI RCCGGY 2 cut(s) 133, 580
BssECI CCNNGG 4 cut(s) 459, 500, 740, 1152
BssMI GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
BssSI CACGAG 1 cut(s) 1174
BssT1I CCWWGG 1 cut(s) 1152
Bst2BI CACGAG 1 cut(s) 1174
Bst2UI CCWGG 5 cut(s) 460, 479, 501, 811, 1206
Bst4CI ACNGT 2 cut(s) 365, 604
Bst6I CTCTTC 2 cut(s) 147, 717
BstAUI TGTACA 1 cut(s) 343
BstC8I GCNNGC 2 cut(s) 135, 436
BstDEI CTNAG 7 cut(s) 55, 66, 186, 216, 537, 1282, 1400
BstDSI CCRYGG 1 cut(s) 1152
BstF5I GGATG 2 cut(s) 231, 883
BstH2I RGCGCY 1 cut(s) 1282
BstHHI GCGC 2 cut(s) 133, 1281
BstKTI GATC 7 cut(s) 429, 673, 688, 984, 1115, 1187, 1372
BstMAI GTCTC 5 cut(s) 240, 533, 558, 968, 1399
BstMBI GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
BstMWI GCNNNNNNNGC 1 cut(s) 1075
BstNI CCWGG 5 cut(s) 460, 479, 501, 811, 1206
BstNSI RCATGY 3 cut(s) 438, 971, 1073
BstSCI CCNGG 5 cut(s) 458, 477, 499, 809, 1204
BstSFI CTRYAG 1 cut(s) 603
BstV1I GCAGC 2 cut(s) 770, 1087
BstV2I GAAGAC 1 cut(s) 168
BstX2I RGATCY 2 cut(s) 426, 1112
BstXI CCANNNNNNTGG 2 cut(s) 754, 1246
BstYI RGATCY 2 cut(s) 426, 1112
BsuRI GGCC 2 cut(s) 444, 1016
BtgI CCRYGG 1 cut(s) 1152
BtgZI GCGATG 1 cut(s) 1008
BtrI CACGTC 1 cut(s) 801
BtsCI GGATG 2 cut(s) 231, 883
BtsI GCAGTG 1 cut(s) 1434
BtsIMutI CAGTG 4 cut(s) 173, 534, 600, 1434
BveI ACCTGC 1 cut(s) 1474
Cac8I GCNNGC 2 cut(s) 135, 436
CaiI CAGNNNCTG 1 cut(s) 62
CfoI GCGC 2 cut(s) 133, 1281
Cfr10I RCCGGY 2 cut(s) 133, 580
Cfr13I GGNCC 4 cut(s) 442, 731, 744, 1202
Csp6I GTAC 3 cut(s) 344, 591, 1145
CspAI ACCGGT 1 cut(s) 580
CviAII CATG 9 cut(s) 272, 435, 668, 702, 752, 968, 1070, 1153, 1328
CviQI GTAC 3 cut(s) 344, 591, 1145
DdeI CTNAG 7 cut(s) 55, 66, 186, 216, 537, 1282, 1400
DpnI GATC 7 cut(s) 428, 672, 687, 983, 1114, 1186, 1371
DpnII GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
EaeI YGGCCR 1 cut(s) 1014
Eam1104I CTCTTC 2 cut(s) 147, 717
EarI CTCTTC 2 cut(s) 147, 717
Ecl136II GAGCTC 2 cut(s) 157, 213
Eco130I CCWWGG 1 cut(s) 1152
Eco24I GRGCYC 2 cut(s) 159, 215
Eco31I GGTCTC 1 cut(s) 558
Eco47I GGWCC 3 cut(s) 731, 744, 1202
Eco47III AGCGCT 1 cut(s) 1280
Eco53kI GAGCTC 2 cut(s) 157, 213
Eco57I CTGAAG 2 cut(s) 171, 710
EcoICRI GAGCTC 2 cut(s) 157, 213
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRII CCWGG 5 cut(s) 458, 477, 499, 809, 1204
EcoT14I CCWWGG 1 cut(s) 1152
EcoT38I GRGCYC 2 cut(s) 159, 215
ErhI CCWWGG 1 cut(s) 1152
Esp3I CGTCTC 1 cut(s) 1399
FaeI CATG 9 cut(s) 275, 438, 671, 705, 755, 971, 1073, 1156, 1331
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 1330, 1362
FatI CATG 9 cut(s) 271, 434, 667, 701, 751, 967, 1069, 1152, 1327
FauI CCCGC 1 cut(s) 269
FauNDI CATATG 2 cut(s) 558, 678
Fnu4HI GCNGC 4 cut(s) 276, 279, 759, 1076
FokI GGATG 2 cut(s) 238, 870
FriOI GRGCYC 2 cut(s) 159, 215
Fsp4HI GCNGC 4 cut(s) 276, 279, 759, 1076
FspBI CTAG 6 cut(s) 75, 335, 894, 1064, 1251, 1296
GlaI GCGC 2 cut(s) 132, 1280
GluI GCNGC 4 cut(s) 276, 279, 759, 1076
GsaI CCCAGC 1 cut(s) 1279
GsuI CTGGAG 1 cut(s) 264
HaeII RGCGCY 1 cut(s) 1282
HaeIII GGCC 2 cut(s) 444, 1016
HapII CCGG 2 cut(s) 134, 581
HhaI GCGC 2 cut(s) 133, 1281
Hin1II CATG 9 cut(s) 275, 438, 671, 705, 755, 971, 1073, 1156, 1331
Hin6I GCGC 2 cut(s) 131, 1279
HinP1I GCGC 2 cut(s) 131, 1279
HincII GTYRAC 1 cut(s) 1256
HindII GTYRAC 1 cut(s) 1256
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 5 cut(s) 59, 122, 976, 1177, 1355
HpaII CCGG 2 cut(s) 134, 581
HphI GGTGA 6 cut(s) 326, 396, 584, 653, 882, 1459
Hpy166II GTNNAC 2 cut(s) 329, 1256
Hpy188I TCNGA 9 cut(s) 58, 127, 151, 217, 690, 741, 981, 1354, 1462
Hpy188III TCNNGA 5 cut(s) 185, 243, 861, 1116, 1335
Hpy8I GTNNAC 2 cut(s) 329, 1256
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 2 cut(s) 651, 1041
HpyCH4III ACNGT 2 cut(s) 365, 604
HpyCH4IV ACGT 3 cut(s) 22, 800, 1392
HpyCH4V TGCA 9 cut(s) 434, 438, 667, 720, 1022, 1075, 1316, 1483, 1494
HpyF10VI GCNNNNNNNGC 1 cut(s) 1075
HpyF3I CTNAG 7 cut(s) 55, 66, 186, 216, 537, 1282, 1400
HpySE526I ACGT 3 cut(s) 22, 800, 1392
Hsp92II CATG 9 cut(s) 275, 438, 671, 705, 755, 971, 1073, 1156, 1331
HspAI GCGC 2 cut(s) 131, 1279
KroI GCCGGC 1 cut(s) 133
KroNI GCCGGC 1 cut(s) 135
Kzo9I GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 3 cut(s) 187, 210, 1123
Lsp1109I GCAGC 2 cut(s) 770, 1087
LweI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
MaeI CTAG 6 cut(s) 75, 335, 894, 1064, 1251, 1296
MaeII ACGT 3 cut(s) 22, 800, 1392
MaeIII GTNAC 5 cut(s) 402, 506, 596, 1388, 1447
MalI GATC 7 cut(s) 428, 672, 687, 983, 1114, 1186, 1371
MboI GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
MboII GAAGA 9 cut(s) 40, 164, 168, 656, 704, 1263, 1350, 1436, 1475
MfeI CAATTG 1 cut(s) 1317
MflI RGATCY 2 cut(s) 426, 1112
MhlI GDGCHC 3 cut(s) 159, 215, 354
MlsI TGGCCA 1 cut(s) 1016
MluNI TGGCCA 1 cut(s) 1016
MlyI GAGTC 4 cut(s) 116, 970, 1186, 1364
MmeI TCCRAC 2 cut(s) 463, 771
MnlI CCTC 6 cut(s) 479, 720, 735, 788, 869, 1038
Mox20I TGGCCA 1 cut(s) 1016
MroNI GCCGGC 1 cut(s) 133
MscI TGGCCA 1 cut(s) 1016
MseI TTAA 4 cut(s) 422, 626, 698, 1443
MslI CAYNNNNRTG 1 cut(s) 700
Msp20I TGGCCA 1 cut(s) 1016
MspI CCGG 2 cut(s) 134, 581
MspR9I CCNGG 5 cut(s) 460, 479, 501, 811, 1206
MunI CAATTG 1 cut(s) 1317
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 5 cut(s) 460, 479, 501, 811, 1206
MwoI GCNNNNNNNGC 1 cut(s) 1075
NaeI GCCGGC 1 cut(s) 135
NcoI CCATGG 1 cut(s) 1152
NdeI CATATG 2 cut(s) 558, 678
NdeII GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
NgoMIV GCCGGC 1 cut(s) 133
NlaIII CATG 9 cut(s) 275, 438, 671, 705, 755, 971, 1073, 1156, 1331
NlaIV GGNNCC 3 cut(s) 925, 1114, 1125
NmuCI GTSAC 4 cut(s) 402, 506, 596, 1447
NspI RCATGY 3 cut(s) 438, 971, 1073
PaeI GCATGC 1 cut(s) 438
PciSI GCTCTTC 1 cut(s) 147
PctI GAATGC 1 cut(s) 551
PdiI GCCGGC 1 cut(s) 135
PfeI GAWTC 1 cut(s) 59
PflMI CCANNNNNTGG 1 cut(s) 451
PfoI TCCNGGA 1 cut(s) 809
PinAI ACCGGT 1 cut(s) 580
PkrI GCNGC 4 cut(s) 277, 280, 760, 1077
PleI GAGTC 4 cut(s) 116, 970, 1185, 1363
PpsI GAGTC 4 cut(s) 116, 970, 1185, 1363
PpuMI RGGWCCY 1 cut(s) 1202
PshBI ATTAAT 1 cut(s) 626
Psp124BI GAGCTC 2 cut(s) 159, 215
Psp5II RGGWCCY 1 cut(s) 1202
Psp6I CCWGG 5 cut(s) 458, 477, 499, 809, 1204
PspFI CCCAGC 1 cut(s) 1275
PspGI CCWGG 5 cut(s) 458, 477, 499, 809, 1204
PspN4I GGNNCC 3 cut(s) 925, 1114, 1125
PspPI GGNCC 4 cut(s) 442, 731, 744, 1202
PspPPI RGGWCCY 1 cut(s) 1202
PstNI CAGNNNCTG 1 cut(s) 62
PsuI RGATCY 2 cut(s) 426, 1112
RsaI GTAC 3 cut(s) 345, 592, 1146
RsaNI GTAC 3 cut(s) 344, 591, 1145
RseI CAYNNNNRTG 1 cut(s) 700
SacI GAGCTC 2 cut(s) 159, 215
SapI GCTCTTC 1 cut(s) 147
SaqAI TTAA 4 cut(s) 422, 626, 698, 1443
SatI GCNGC 4 cut(s) 276, 279, 759, 1076
Sau3AI GATC 7 cut(s) 426, 670, 685, 981, 1112, 1184, 1369
Sau96I GGNCC 4 cut(s) 442, 731, 744, 1202
ScaI AGTACT 1 cut(s) 1146
SchI GAGTC 4 cut(s) 116, 970, 1186, 1364
ScrFI CCNGG 5 cut(s) 460, 479, 501, 811, 1206
SduI GDGCHC 3 cut(s) 159, 215, 354
SfaNI GCATC 5 cut(s) 118, 637, 1031, 1206, 1319
SfcI CTRYAG 1 cut(s) 603
SinI GGWCC 3 cut(s) 731, 744, 1202
SmiMI CAYNNNNRTG 1 cut(s) 700
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
SphI GCATGC 1 cut(s) 438
SsiI CCGC 4 cut(s) 262, 275, 278, 971
SspMI CTAG 6 cut(s) 75, 335, 894, 1064, 1251, 1296
SstI GAGCTC 2 cut(s) 159, 215
StyD4I CCNGG 5 cut(s) 458, 477, 499, 809, 1204
StyI CCWWGG 1 cut(s) 1152
TaaI ACNGT 2 cut(s) 365, 604
TaiI ACGT 3 cut(s) 25, 803, 1395
TaqI TCGA 3 cut(s) 159, 1183, 1368
TatI WGTACW 2 cut(s) 343, 1144
TauI GCSGC 2 cut(s) 278, 281
TfiI GAWTC 1 cut(s) 59
Tru1I TTAA 4 cut(s) 422, 626, 698, 1443
Tru9I TTAA 4 cut(s) 422, 626, 698, 1443
TscAI CASTG 4 cut(s) 173, 541, 607, 1441
TseFI GTSAC 4 cut(s) 402, 506, 596, 1447
TseI GCWGC 2 cut(s) 758, 1075
Tsp45I GTSAC 4 cut(s) 402, 506, 596, 1447
TspDTI ATGAA 5 cut(s) 41, 704, 1179, 1403, 1482
TspGWI ACGGA 1 cut(s) 162
TspRI CASTG 4 cut(s) 173, 541, 607, 1441
Van91I CCANNNNNTGG 1 cut(s) 451
VpaK11BI GGWCC 3 cut(s) 731, 744, 1202
VspI ATTAAT 1 cut(s) 626
XapI RAATTY 2 cut(s) 513, 1497
XceI RCATGY 3 cut(s) 438, 971, 1073
XspI CTAG 6 cut(s) 75, 335, 894, 1064, 1251, 1296
ZrmI AGTACT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.