AT5G21040

F-box WD-40 repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0007918
Physical Location & Seq
Reverse (-)
7144829 .. 7147277
2449 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G21040.2

Sequence Viewer

Length: 1620 bp
ATGGAATTTGAGTGCCAAGAGAGACTTGAAGCTGCGAACGATCAAAGAAGTGAGTCTGGTCTTTTGAATACCGATTTGAGAATAGGTAATGATGGGTCTGTTGAGATTCCAAATGTGAAGTTGTGTTGTCAGAAAAAGAAGGGAACTTTAGTGCCCAGTGGCTCGAAACAGTTACTCTCTGACAAGGATTTGTCTACTACCATTATTGATTTACCTCAGGCATTGATATCTGAGATTCTTAATTGCCTTGACCCAAAAGAGTTGGGTCTAGTGTCTTGTGTTTCAACTTATCTGCATAGGTTAGCATCTGAGCATCACGCTTGGAAGGAGTTCTATCGTGAGAGATGGGGACTCCCTGTAGTTTTCGGAGCTGCAAGTTCAGGGCTTTCTGATGAGAGATCATGGAAAGATCTGTTTGTTGAAAGGGAATTTAGGAGTAGGACCTTTTTAGGACGTTATAGTATTGATACTCTGTATGGTCACACTGAAGCAGTCCGGACTGTTTTTCTCTTAGCTTCTGCCAAGCTCGTTTTCACTTCTGGATATGATTCCATTGTTCGGATGTGGGACATGGAAGAAGGCTTGTCTATTGCGGCATCTAAACCTCTCGGTTGTACGATTAGGGCACTTGCTGCTGATACAAAGCTGTTGGTAGCTGGCGGTACTGATGGATTCATTCATTGCTGGAAATCACTGGATGGTCTCCGGAACCTGTTTGATCTCACAGGTTTTCAGAAAGAGAAGACTGAGTTTCGGCTATGGGGACATGAGGGTCCTATTACATCTCTTGCCCTGGACATGACAAGTATCTTTAGCGGTTCATGGGATATGTCTGTTCGTATATGGGATCGATCTTCAATGAAGTGTGTCAAAACCTTGAGGCATAGTGATTGGGTTTGGGGACTTGCACCTCATGAAACCACCCTCGCTAGCACGTCAGGTTCTGATGTATATATTTGGGACGTTAGCAGTGAGACTCCATTGGCGATCATCCCTGATGCTCATGAGGGTACCACTTACTCTTTGGCAAGAAGCCATACTGGGGATTTCCTGTTTACTGGTGGAGAAGATGGAGGGATTAAAATGTTTGAGATCAGAAGATACGGTAGTGAAACAAGCGTTGTACTTATATCTCAATGGATGCCTCACACTAGTCCTGTCTACTCTCTTTCTTTTGAGTTTCCTTGGCTTGTCTCAGCATCCGGTGACGGTAAACTCGCACTTATCGACGTTAGGAAACTGTTAAAAACTAACCGTTGTGCCTATTCCAAAAGGATTTCTTCGAGTACTGTGGAACCGCCACAACGAATGCTGCACGGGTTCGGGTCAAACTTGTTCTCTGTGGACGTGGGTTATGACCGTATAGTGTGTGGAGGTGAAGAAGGCACAGTCCGGATATGGAACTTCACACAAGCATTGGAGATAGAGCGAAGGACCCGAGCTCTGAAAGGAATGAGGCATGAGAATAGGATGAGACGAAGGAGAATGCAAATGGAGATGAACGCAAAGAATGGAAGGCCTGACCAATGCTCCATTGCTGCTCATAAGAACCCCATCAATGGAGAAAGGAACCGAGCCTGGCATAGTAAACGAAGAGCAAGCGGGAAGGCGAAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042594 GO:0050896 GO:0051716 GO:0071496
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like WD40

Protein Analysis

539

Amino Acids

60.55

Weight (kDa)

8.53

Isoelectric Point (pI)

38.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 69 - 113 1.9e-07 F-box-like
Beta-prop_WDR5 PF25175 155 - 232 5.3e-06 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 155 - 230 6.4e-06 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 156 - 230 4.7e-07 WDR3 first beta-propeller domain
Beta-prop_SCAP PF24017 170 - 286 1e-05 SCAP Beta-propeller
Beta-prop_TEP1_2nd PF25047 175 - 328 4.2e-06 TEP-1 second beta-propeller
WD40_Prp19 PF24814 206 - 431 5.1e-15 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 212 - 417 1.2e-15 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 233 - 471 2.7e-17 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 246 - 313 8.7e-08 WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd PF25172 262 - 371 3e-08 WDR3 second beta-propeller domain
WD40_CDC20-Fz PF24807 307 - 471 6e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 309 - 413 1.2e-07 WDR3 first beta-propeller domain
WDR55 PF24796 315 - 471 2.4e-06 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 771
Acc65I GGTACC 1 cut(s) 1010
AccB1I GGYRCC 1 cut(s) 1010
AccI GTMKAC 2 cut(s) 194, 1161
AccIII TCCGGA 3 cut(s) 495, 705, 1392
AciI CCGC 5 cut(s) 593, 660, 816, 1298, 1602
AclWI GGATC 1 cut(s) 855
AcsI RAATTY 2 cut(s) 5, 428
AcuI CTGAAG 1 cut(s) 507
AfaI GTAC 5 cut(s) 616, 664, 1012, 1125, 1288
AfiI CCNNNNNNNGG 3 cut(s) 558, 1042, 1559
AgsI TTSAA 5 cut(s) 29, 67, 285, 422, 858
AhlI ACTAGT 1 cut(s) 1151
AjiI CACGTC 2 cut(s) 936, 1348
AjnI CCWGG 2 cut(s) 792, 1577
AjuI GAANNNNNNNTTGG 2 cut(s) 515, 547
AluBI AGCT 7 cut(s) 32, 371, 515, 526, 646, 656, 1442
AluI AGCT 7 cut(s) 32, 371, 515, 526, 646, 656, 1442
Alw21I GWGCWC 1 cut(s) 1444
Alw26I GTCTC 5 cut(s) 16, 707, 968, 1198, 1468
AlwI GGATC 1 cut(s) 855
AlwNI CAGNNNCTG 1 cut(s) 944
Ama87I CYCGRG 1 cut(s) 1437
Aor13HI TCCGGA 3 cut(s) 495, 705, 1392
AoxI GGCC 2 cut(s) 1517, 1614
ApeKI GCWGC 5 cut(s) 32, 371, 632, 1312, 1538
ApoI RAATTY 2 cut(s) 5, 428
Asp700I GAANNNNTTC 1 cut(s) 329
Asp718I GGTACC 1 cut(s) 1010
AspS9I GGNCC 3 cut(s) 441, 773, 1434
AsuHPI GGTGA 2 cut(s) 1217, 1388
AsuNHI GCTAGC 1 cut(s) 929
AvaI CYCGRG 1 cut(s) 1437
AvaII GGWCC 3 cut(s) 441, 773, 1434
AxyI CCTNAGG 1 cut(s) 216
BaeGI GKGCMC 2 cut(s) 156, 628
BaeI ACNNNNGTAYC 2 cut(s) 1093, 1126
BanI GGYRCC 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 1444
BbsI GAAGAC 1 cut(s) 749
Bbv12I GWGCWC 1 cut(s) 1444
BbvI GCAGC 5 cut(s) 19, 358, 619, 1299, 1525
BccI CCATC 6 cut(s) 86, 339, 662, 692, 1064, 1562
BciT130I CCWGG 2 cut(s) 794, 1579
BcoDI GTCTC 5 cut(s) 16, 707, 968, 1198, 1468
BcuI ACTAGT 1 cut(s) 1151
BfaI CTAG 3 cut(s) 269, 930, 1152
BfmI CTRYAG 1 cut(s) 357
BglII AGATCT 1 cut(s) 409
BisI GCNGC 6 cut(s) 33, 372, 594, 633, 1313, 1539
BlsI GCNGC 6 cut(s) 34, 373, 595, 634, 1314, 1540
BmcAI AGTACT 1 cut(s) 1288
Bme1390I CCNGG 2 cut(s) 794, 1579
Bme18I GGWCC 3 cut(s) 441, 773, 1434
BmeT110I CYCGRG 1 cut(s) 1437
BmgBI CACGTC 2 cut(s) 936, 1348
BmgT120I GGNCC 3 cut(s) 441, 773, 1434
BmiI GGNNCC 6 cut(s) 710, 774, 1012, 1296, 1436, 1571
BmrFI CCNGG 2 cut(s) 794, 1579
BmrI ACTGGG 2 cut(s) 150, 1050
BmsI GCATC 6 cut(s) 314, 322, 605, 988, 1131, 1208
BmtI GCTAGC 1 cut(s) 933
BmuI ACTGGG 2 cut(s) 150, 1050
BpiI GAAGAC 1 cut(s) 749
BpuEI CTTGAG 1 cut(s) 898
Bsa29I ATCGAT 1 cut(s) 850
BsaI GGTCTC 1 cut(s) 707
BsaJI CCNNGG 2 cut(s) 792, 1184
BsaWI WCCGGW 4 cut(s) 495, 705, 1202, 1392
BsaXI ACNNNNNCTCC 2 cut(s) 1514, 1544
Bsc4I CCNNNNNNNGG 3 cut(s) 558, 1042, 1559
Bse1I ACTGG 4 cut(s) 156, 699, 1045, 1063
Bse21I CCTNAGG 1 cut(s) 216
Bse3DI GCAATG 2 cut(s) 679, 1533
BseAI TCCGGA 3 cut(s) 495, 705, 1392
BseBI CCWGG 2 cut(s) 794, 1579
BseCI ATCGAT 1 cut(s) 850
BseDI CCNNGG 2 cut(s) 792, 1184
BseGI GGATG 6 cut(s) 567, 703, 990, 1146, 1199, 1476
BseLI CCNNNNNNNGG 3 cut(s) 558, 1042, 1559
BseMI GCAATG 2 cut(s) 679, 1533
BseMII CTCAG 5 cut(s) 222, 230, 300, 738, 1209
BseNI ACTGG 4 cut(s) 156, 699, 1045, 1063
BseSI GKGCMC 2 cut(s) 156, 628
BseXI GCAGC 5 cut(s) 19, 358, 619, 1299, 1525
BsgI GTGCAG 1 cut(s) 1298
BshFI GGCC 2 cut(s) 1519, 1616
BshNI GGYRCC 1 cut(s) 1010
BshVI ATCGAT 1 cut(s) 850
BsiHKAI GWGCWC 1 cut(s) 1444
BsiHKCI CYCGRG 1 cut(s) 1437
BsiSI CCGG 4 cut(s) 496, 706, 1203, 1393
BslFI GGGAC 5 cut(s) 363, 581, 777, 915, 974
BslI CCNNNNNNNGG 3 cut(s) 558, 1042, 1559
BsmAI GTCTC 5 cut(s) 16, 707, 968, 1198, 1468
BsmBI CGTCTC 1 cut(s) 1468
BsmFI GGGAC 5 cut(s) 363, 581, 777, 915, 974
BsmI GAATGC 2 cut(s) 1314, 1491
BsnI GGCC 2 cut(s) 1519, 1616
Bso31I GGTCTC 1 cut(s) 707
BsoBI CYCGRG 1 cut(s) 1437
Bsp1286I GDGCHC 3 cut(s) 156, 628, 1444
Bsp13I TCCGGA 3 cut(s) 495, 705, 1392
Bsp143I GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
BspACI CCGC 5 cut(s) 593, 660, 816, 1298, 1602
BspANI GGCC 2 cut(s) 1519, 1616
BspCNI CTCAG 5 cut(s) 223, 229, 301, 739, 1208
BspDI ATCGAT 1 cut(s) 850
BspEI TCCGGA 3 cut(s) 495, 705, 1392
BspHI TCATGA 2 cut(s) 913, 1003
BspLI GGNNCC 6 cut(s) 710, 774, 1012, 1296, 1436, 1571
BspOI GCTAGC 1 cut(s) 933
BspPI GGATC 1 cut(s) 855
BspQI GCTCTTC 1 cut(s) 1588
BspT107I GGYRCC 1 cut(s) 1010
BspTNI GGTCTC 1 cut(s) 707
BsrDI GCAATG 2 cut(s) 679, 1533
BsrI ACTGG 4 cut(s) 156, 699, 1045, 1063
BssECI CCNNGG 2 cut(s) 792, 1184
BssMI GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
BssT1I CCWWGG 1 cut(s) 1184
Bst2UI CCWGG 2 cut(s) 794, 1579
Bst4CI ACNGT 9 cut(s) 171, 502, 1106, 1211, 1242, 1256, 1291, 1361, 1390
Bst6I CTCTTC 1 cut(s) 1588
BstAPI GCANNNNNTGC 1 cut(s) 632
BstC8I GCNNGC 3 cut(s) 658, 931, 1600
BstDEI CTNAG 6 cut(s) 216, 231, 309, 511, 747, 1195
BstF5I GGATG 6 cut(s) 567, 703, 990, 1146, 1199, 1476
BstKTI GATC 8 cut(s) 43, 401, 412, 721, 850, 854, 990, 1095
BstMAI GTCTC 5 cut(s) 16, 707, 968, 1198, 1468
BstMBI GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
BstMWI GCNNNNNNNGC 1 cut(s) 632
BstNI CCWGG 2 cut(s) 794, 1579
BstSCI CCNGG 2 cut(s) 792, 1577
BstSFI CTRYAG 1 cut(s) 357
BstSLI GKGCMC 2 cut(s) 156, 628
BstV1I GCAGC 5 cut(s) 19, 358, 619, 1299, 1525
BstV2I GAAGAC 1 cut(s) 749
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
Bsu15I ATCGAT 1 cut(s) 850
Bsu36I CCTNAGG 1 cut(s) 216
BsuRI GGCC 2 cut(s) 1519, 1616
BsuTUI ATCGAT 1 cut(s) 850
BtrI CACGTC 2 cut(s) 936, 1348
BtsCI GGATG 6 cut(s) 567, 703, 990, 1146, 1199, 1476
BtsI GCAGTG 1 cut(s) 976
BtsIMutI CAGTG 4 cut(s) 163, 483, 692, 976
Cac8I GCNNGC 3 cut(s) 658, 931, 1600
CaiI CAGNNNCTG 1 cut(s) 944
CciI TCATGA 2 cut(s) 913, 1003
Cfr13I GGNCC 3 cut(s) 441, 773, 1434
ClaI ATCGAT 1 cut(s) 850
Csp6I GTAC 5 cut(s) 615, 663, 1011, 1124, 1287
CviAII CATG 8 cut(s) 402, 571, 767, 799, 822, 914, 1004, 1460
CviQI GTAC 5 cut(s) 615, 663, 1011, 1124, 1287
DdeI CTNAG 6 cut(s) 216, 231, 309, 511, 747, 1195
DpnI GATC 8 cut(s) 42, 400, 411, 720, 849, 853, 989, 1094
DpnII GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
DrdI GACNNNNNNGTC 1 cut(s) 771
DseDI GACNNNNNNGTC 1 cut(s) 771
Eam1104I CTCTTC 1 cut(s) 1588
EarI CTCTTC 1 cut(s) 1588
Ecl136II GAGCTC 1 cut(s) 1442
Eco130I CCWWGG 1 cut(s) 1184
Eco147I AGGCCT 2 cut(s) 1519, 1616
Eco24I GRGCYC 1 cut(s) 1444
Eco31I GGTCTC 1 cut(s) 707
Eco32I GATATC 1 cut(s) 228
Eco47I GGWCC 3 cut(s) 441, 773, 1434
Eco53kI GAGCTC 1 cut(s) 1442
Eco57I CTGAAG 1 cut(s) 507
Eco81I CCTNAGG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 1437
EcoICRI GAGCTC 1 cut(s) 1442
EcoO109I RGGNCCY 3 cut(s) 441, 773, 1434
EcoRII CCWGG 2 cut(s) 792, 1577
EcoRV GATATC 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 1184
EcoT38I GRGCYC 1 cut(s) 1444
ErhI CCWWGG 1 cut(s) 1184
Esp3I CGTCTC 1 cut(s) 1468
FaeI CATG 8 cut(s) 405, 574, 770, 802, 825, 917, 1007, 1463
FalI AAGNNNNNCTT 4 cut(s) 9, 41, 1264, 1296
FaqI GGGAC 5 cut(s) 363, 581, 777, 915, 974
FatI CATG 8 cut(s) 401, 570, 766, 798, 821, 913, 1003, 1459
FauI CCCGC 1 cut(s) 1595
FblI GTMKAC 2 cut(s) 194, 1161
Fnu4HI GCNGC 6 cut(s) 33, 372, 594, 633, 1313, 1539
FokI GGATG 6 cut(s) 574, 710, 977, 1153, 1186, 1483
FriOI GRGCYC 1 cut(s) 1444
Fsp4HI GCNGC 6 cut(s) 33, 372, 594, 633, 1313, 1539
FspBI CTAG 3 cut(s) 269, 930, 1152
GluI GCNGC 6 cut(s) 33, 372, 594, 633, 1313, 1539
HaeIII GGCC 2 cut(s) 1519, 1616
HapII CCGG 4 cut(s) 496, 706, 1203, 1393
Hin1II CATG 8 cut(s) 405, 574, 770, 802, 825, 917, 1007, 1463
HinfI GANTC 7 cut(s) 53, 106, 235, 351, 548, 672, 976
HpaII CCGG 4 cut(s) 496, 706, 1203, 1393
HphI GGTGA 2 cut(s) 1217, 1388
Hpy166II GTNNAC 6 cut(s) 195, 1056, 1162, 1214, 1345, 1589
Hpy188III TCNNGA 7 cut(s) 338, 496, 540, 706, 914, 1004, 1393
Hpy8I GTNNAC 6 cut(s) 195, 1056, 1162, 1214, 1345, 1589
Hpy99I CGWCG 1 cut(s) 1232
HpyAV CCTTC 9 cut(s) 133, 319, 572, 1376, 1425, 1473, 1509, 1600, 1606
HpyCH4III ACNGT 9 cut(s) 171, 502, 1106, 1211, 1242, 1256, 1291, 1361, 1390
HpyCH4IV ACGT 5 cut(s) 454, 935, 963, 1230, 1347
HpyCH4V TGCA 5 cut(s) 295, 374, 908, 1315, 1489
HpyF10VI GCNNNNNNNGC 1 cut(s) 632
HpyF3I CTNAG 6 cut(s) 216, 231, 309, 511, 747, 1195
HpySE526I ACGT 5 cut(s) 454, 935, 963, 1230, 1347
Hsp92II CATG 8 cut(s) 405, 574, 770, 802, 825, 917, 1007, 1463
Kpn2I TCCGGA 3 cut(s) 495, 705, 1392
KpnI GGTACC 1 cut(s) 1014
Kzo9I GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
LguI GCTCTTC 1 cut(s) 1588
LmnI GCTCC 2 cut(s) 368, 1535
Lsp1109I GCAGC 5 cut(s) 19, 358, 619, 1299, 1525
LweI GCATC 6 cut(s) 314, 322, 605, 988, 1131, 1208
MaeI CTAG 3 cut(s) 269, 930, 1152
MaeII ACGT 5 cut(s) 454, 935, 963, 1230, 1347
MaeIII GTNAC 3 cut(s) 171, 479, 1205
MalI GATC 8 cut(s) 42, 400, 411, 720, 849, 853, 989, 1094
MboI GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
MboII GAAGA 8 cut(s) 587, 754, 846, 1079, 1110, 1272, 1391, 1605
MflI RGATCY 1 cut(s) 409
MhlI GDGCHC 3 cut(s) 156, 628, 1444
MluCI AATT 3 cut(s) 5, 241, 428
MlyI GAGTC 3 cut(s) 62, 345, 970
MroI TCCGGA 3 cut(s) 495, 705, 1392
MroXI GAANNNNTTC 1 cut(s) 329
MseI TTAA 3 cut(s) 240, 1080, 1244
MspI CCGG 4 cut(s) 496, 706, 1203, 1393
MspR9I CCNGG 2 cut(s) 794, 1579
Mva1269I GAATGC 2 cut(s) 1314, 1491
MvaI CCWGG 2 cut(s) 794, 1579
MwoI GCNNNNNNNGC 1 cut(s) 632
NdeII GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
NheI GCTAGC 1 cut(s) 929
NlaIII CATG 8 cut(s) 405, 574, 770, 802, 825, 917, 1007, 1463
NlaIV GGNNCC 6 cut(s) 710, 774, 1012, 1296, 1436, 1571
NmuCI GTSAC 2 cut(s) 479, 1205
PagI TCATGA 2 cut(s) 913, 1003
PceI AGGCCT 2 cut(s) 1519, 1616
PciSI GCTCTTC 1 cut(s) 1588
PcsI WCGNNNNNNNCGW 1 cut(s) 1224
PctI GAATGC 2 cut(s) 1314, 1491
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 4 cut(s) 106, 235, 548, 672
PkrI GCNGC 6 cut(s) 34, 373, 595, 634, 1314, 1540
PleI GAGTC 3 cut(s) 61, 345, 970
PpsI GAGTC 3 cut(s) 61, 345, 970
PpuMI RGGWCCY 3 cut(s) 441, 773, 1434
Psp124BI GAGCTC 1 cut(s) 1444
Psp5II RGGWCCY 3 cut(s) 441, 773, 1434
Psp6I CCWGG 2 cut(s) 792, 1577
PspGI CCWGG 2 cut(s) 792, 1577
PspN4I GGNNCC 6 cut(s) 710, 774, 1012, 1296, 1436, 1571
PspPI GGNCC 3 cut(s) 441, 773, 1434
PspPPI RGGWCCY 3 cut(s) 441, 773, 1434
PstNI CAGNNNCTG 1 cut(s) 944
PsuI RGATCY 1 cut(s) 409
RsaI GTAC 5 cut(s) 616, 664, 1012, 1125, 1288
RsaNI GTAC 5 cut(s) 615, 663, 1011, 1124, 1287
SacI GAGCTC 1 cut(s) 1444
SapI GCTCTTC 1 cut(s) 1588
SaqAI TTAA 3 cut(s) 240, 1080, 1244
SatI GCNGC 6 cut(s) 33, 372, 594, 633, 1313, 1539
Sau3AI GATC 8 cut(s) 40, 398, 409, 718, 847, 851, 987, 1092
Sau96I GGNCC 3 cut(s) 441, 773, 1434
ScaI AGTACT 1 cut(s) 1288
SchI GAGTC 3 cut(s) 62, 345, 970
ScrFI CCNGG 2 cut(s) 794, 1579
SduI GDGCHC 3 cut(s) 156, 628, 1444
SfaNI GCATC 6 cut(s) 314, 322, 605, 988, 1131, 1208
SfcI CTRYAG 1 cut(s) 357
SinI GGWCC 3 cut(s) 441, 773, 1434
SmlI CTYRAG 1 cut(s) 877
SmoI CTYRAG 1 cut(s) 877
SpeI ACTAGT 1 cut(s) 1151
Sse9I AATT 3 cut(s) 5, 241, 428
SseBI AGGCCT 2 cut(s) 1519, 1616
SsiI CCGC 5 cut(s) 593, 660, 816, 1298, 1602
SspMI CTAG 3 cut(s) 269, 930, 1152
SstI GAGCTC 1 cut(s) 1444
StuI AGGCCT 2 cut(s) 1519, 1616
StyD4I CCNGG 2 cut(s) 792, 1577
StyI CCWWGG 1 cut(s) 1184
TaaI ACNGT 9 cut(s) 171, 502, 1106, 1211, 1242, 1256, 1291, 1361, 1390
TaiI ACGT 5 cut(s) 457, 938, 966, 1233, 1350
TaqI TCGA 4 cut(s) 164, 850, 1227, 1283
TasI AATT 3 cut(s) 5, 241, 428
TatI WGTACW 2 cut(s) 1123, 1286
TauI GCSGC 1 cut(s) 596
TfiI GAWTC 4 cut(s) 106, 235, 548, 672
Tru1I TTAA 3 cut(s) 240, 1080, 1244
Tru9I TTAA 3 cut(s) 240, 1080, 1244
TscAI CASTG 4 cut(s) 163, 490, 699, 976
TseFI GTSAC 2 cut(s) 479, 1205
TseI GCWGC 5 cut(s) 32, 371, 632, 1312, 1538
Tsp45I GTSAC 2 cut(s) 479, 1205
TspDTI ATGAA 6 cut(s) 664, 668, 810, 875, 930, 1514
TspRI CASTG 4 cut(s) 163, 490, 699, 976
VpaK11BI GGWCC 3 cut(s) 441, 773, 1434
XapI RAATTY 2 cut(s) 5, 428
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
XmiI GTMKAC 2 cut(s) 194, 1161
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 3 cut(s) 269, 930, 1152
ZrmI AGTACT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.