Prupe.6G152700_v2.0.a1

F-box WD-40 repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
13276058 .. 13278827
2770 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G152700.1

Sequence Viewer

Length: 1704 bp
ATGGAATTTGAATGCCAGGTGAGTACTGAGGTTTCTAAGAATTTGGTAGATTGTGTAGACAATTCGTTTGGACAACAAGGGGAACCAAATCAATTCAATTCCAAGCTGGAAGCTGAAAACCTTGGCATTTCAGAACAAACATCAGATTCATATACTGAAAAGGAAAAAATTGCACTCTCGAAACCTACATTGATCAAGAAACCAAACTCGGACTCTTGTGGTTCAAAACAGTTTTTGTCTAGTGATGTTGTTCTTAATTCTCGTAGGTCAATCACTGACCTTCCACCAGCCTTGTTATCCGAAATTCTGAATTTCCTTGACCCAAAAGAGCTAGGTATGGTTTCATGTGTATCAACGTATCTCTGTAGGCTTGCGTCTGAACACCATGTTTGGAAGGATTTTTATTGTGAGAGATGGGGAAATTCAACAGTTCCAACATCTTTGGGTTCAGGAGTTTCTGATGAGATGTCATGGAAGGAATTTTTTGTGGAAAGGGAGTTTAGGAGTAAGACTTTTATGGGACGTTATAGCATTGATGTTATGTATGGCCATAATGAAGCTGTTCTTACAGTTTTCCTTTTGGCTTCCGCAAAGCTCATATTTACTGCTGGGTATGACCAAACTGTAAAAATGTGGAACATGGAAGAAGGGTTGTTGATTGCATCTTCAAGATCTCTTGGTTGCACTATCCGTGCAGTTGCTGGAGATACAAAACTGTTGGTTGCTGGTGGTACTGATGGCTTTATCCAGTGTTGGCGGGCAGTGGAAGGCTTTCCACACTTGTTTGATATTAAGGGTCCTCAAAACCAAAATACCGAGTTTCGACTATGGGAGCATGAGGGGCCCATAACTTCTCTTGCCTTGGATCTTACCAGGATTTATAGTGGTTCCTGGGACATGACTGTTCGTGTATGGGATCGTTTGTCACTGAAGTGCGTAAAGGTTTTGAGACATAGTGATTGGGTTTGGGCACTTGTTCCTCATGATCTTACAGTTGCTAGCACATCGGGTTCAGATGTTTGTATTTGGGATACTAGTAGTGGGAGACTGATGACCATTATTCATAGTGCTCATGTTGGTAACACCTACTCTTTGGCACGAAACCACACAGGGGATTTTCTATTTACCGGAGGGGAAGATGGTGCAATACACATGTACGAAATCACTAGTCAAGGCCTTGAGACTAATGCATTATTTGTTGCGACTTGGGTTCCTCACTCAGGTTGTGTCTATTCCCTTGCGTTTGAGTTTCCATGGCTTGTTTCTGCTTCTGCTGATGGGAAACTTGCACTAATTGATGTGAGAAAGCTTCTAAGGACTAGAAAGCATGATTCAGGGAAACGTTTTTCATGTGTTAAGCTCGTGGACCGCAGTAGCATGGAACCCCCACAGAGGATGTTACATGGATTTGGGAAGAATCTCATGTCAGTGGGCATTGGTGCTGATCGTATTGTATGTGGAGGTGACGAAGGTGTTGTTAGGATCTGGAACTTCACAGAAGCTTTGGAGATTGAGCGGAGGGTTTGTGCTTTAAAAGCAATACGGTTGGAGAACCGGATGAGGCGGCGTAAGCTTCATTTAGAAAATAGCAGCAAAGGCAGTAGAAATGATCAATGTTCAGTTGCAGCCAAGAAGAATCCAGTCACTGGTGACAGGATTGGTTGGCACAGTAAACGTGCATTGAGTGGCAAGCTGAAGTCATAG
Functional Annotation

Protein Analysis

568

Amino Acids

63.37

Weight (kDa)

7.55

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1646
AccBSI CCGCTC 1 cut(s) 1516
AccI GTMKAC 1 cut(s) 57
AciI CCGC 5 cut(s) 588, 757, 1369, 1516, 1564
AclI AACGTT 1 cut(s) 1342
AclWI GGATC 3 cut(s) 873, 924, 1490
AcoI YGGCCR 1 cut(s) 547
AcsI RAATTY 6 cut(s) 5, 40, 303, 310, 421, 479
AcuI CTGAAG 1 cut(s) 950
AfaI GTAC 3 cut(s) 25, 733, 1157
AfiI CCNNNNNNNGG 4 cut(s) 1111, 1220, 1392, 1646
AflIII ACRYGT 1 cut(s) 1152
AgsI TTSAA 5 cut(s) 11, 97, 225, 426, 669
AhlI ACTAGT 2 cut(s) 1034, 1166
AjnI CCWGG 3 cut(s) 15, 872, 890
AleI CACNNNNGTG 1 cut(s) 931
Alw21I GWGCWC 1 cut(s) 1072
Alw26I GTCTC 3 cut(s) 943, 1039, 1175
AlwI GGATC 3 cut(s) 873, 924, 1490
AlwNI CAGNNNCTG 2 cut(s) 701, 1646
AoxI GGCC 3 cut(s) 547, 842, 1174
ApaI GGGCCC 1 cut(s) 846
ApeKI GCWGC 2 cut(s) 1590, 1625
ApoI RAATTY 6 cut(s) 5, 40, 303, 310, 421, 479
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
Asp700I GAANNNNTTC 2 cut(s) 561, 771
AspS9I GGNCC 4 cut(s) 797, 842, 843, 1366
AsuHPI GGTGA 3 cut(s) 31, 1475, 1661
AsuNHI GCTAGC 1 cut(s) 998
AvaII GGWCC 2 cut(s) 797, 1366
BaeGI GKGCMC 2 cut(s) 846, 973
BalI TGGCCA 1 cut(s) 549
BanII GRGCYC 1 cut(s) 846
BauI CACGAG 1 cut(s) 1361
Bbv12I GWGCWC 1 cut(s) 1072
BbvI GCAGC 2 cut(s) 1602, 1637
BccI CCATC 4 cut(s) 408, 731, 1133, 1271
BciT130I CCWGG 3 cut(s) 17, 874, 892
BciVI GTATCC 1 cut(s) 1024
BclI TGATCA 2 cut(s) 192, 1609
BcoDI GTCTC 3 cut(s) 943, 1039, 1175
BcuI ACTAGT 2 cut(s) 1034, 1166
BfaI CTAG 6 cut(s) 240, 332, 999, 1035, 1167, 1320
BfmI CTRYAG 1 cut(s) 364
BfuI GTATCC 1 cut(s) 1024
BglII AGATCT 1 cut(s) 671
BisI GCNGC 3 cut(s) 1565, 1591, 1626
BlsI GCNGC 3 cut(s) 1566, 1592, 1627
BmcAI AGTACT 1 cut(s) 25
Bme1390I CCNGG 3 cut(s) 17, 874, 892
Bme18I GGWCC 2 cut(s) 797, 1366
BmgT120I GGNCC 4 cut(s) 797, 842, 843, 1366
BmiI GGNNCC 7 cut(s) 84, 798, 843, 844, 889, 1212, 1383
BmrFI CCNGG 3 cut(s) 17, 874, 892
BmsI GCATC 1 cut(s) 671
BmtI GCTAGC 1 cut(s) 1002
BpmI CTGGAG 1 cut(s) 723
BpuEI CTTGAG 1 cut(s) 1199
BsaJI CCNNGG 4 cut(s) 121, 861, 891, 1253
BsaWI WCCGGW 2 cut(s) 1127, 1554
BsaXI ACNNNNNCTCC 2 cut(s) 1510, 1540
Bsc4I CCNNNNNNNGG 4 cut(s) 1111, 1220, 1392, 1646
Bse1I ACTGG 3 cut(s) 748, 1640, 1651
BseBI CCWGG 3 cut(s) 17, 874, 892
BseDI CCNNGG 4 cut(s) 121, 861, 891, 1253
BseGI GGATG 2 cut(s) 1401, 1563
BseLI CCNNNNNNNGG 4 cut(s) 1111, 1220, 1392, 1646
BseMII CTCAG 2 cut(s) 18, 1233
BseNI ACTGG 3 cut(s) 748, 1640, 1651
BseSI GKGCMC 2 cut(s) 846, 973
BseXI GCAGC 2 cut(s) 1602, 1637
BseYI CCCAGC 1 cut(s) 608
BsgI GTGCAG 1 cut(s) 714
BshFI GGCC 3 cut(s) 549, 844, 1176
BsiHKAI GWGCWC 1 cut(s) 1072
BsiSI CCGG 2 cut(s) 1128, 1555
BslFI GGGAC 2 cut(s) 534, 908
BslI CCNNNNNNNGG 4 cut(s) 1111, 1220, 1392, 1646
BsmAI GTCTC 3 cut(s) 943, 1039, 1175
BsmFI GGGAC 2 cut(s) 534, 908
BsmI GAATGC 1 cut(s) 17
BsnI GGCC 3 cut(s) 549, 844, 1176
Bsp120I GGGCCC 1 cut(s) 842
Bsp1286I GDGCHC 3 cut(s) 846, 973, 1072
Bsp143I GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
Bsp19I CCATGG 1 cut(s) 1253
BspACI CCGC 5 cut(s) 588, 757, 1369, 1516, 1564
BspANI GGCC 3 cut(s) 549, 844, 1176
BspCNI CTCAG 2 cut(s) 19, 1232
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 7 cut(s) 84, 798, 843, 844, 889, 1212, 1383
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 3 cut(s) 873, 924, 1490
BsrBI CCGCTC 1 cut(s) 1516
BsrI ACTGG 3 cut(s) 748, 1640, 1651
BssECI CCNNGG 4 cut(s) 121, 861, 891, 1253
BssMI GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
BssSI CACGAG 1 cut(s) 1361
BssT1I CCWWGG 3 cut(s) 121, 861, 1253
Bst2BI CACGAG 1 cut(s) 1361
Bst2UI CCWGG 3 cut(s) 17, 874, 892
Bst4CI ACNGT 9 cut(s) 231, 430, 571, 625, 717, 904, 994, 1545, 1670
BstC8I GCNNGC 4 cut(s) 372, 759, 1000, 1691
BstDEI CTNAG 4 cut(s) 27, 36, 1219, 1313
BstDSI CCRYGG 1 cut(s) 1253
BstENI CCTNNNNNAGG 1 cut(s) 1218
BstF5I GGATG 2 cut(s) 1401, 1563
BstKTI GATC 8 cut(s) 195, 674, 868, 919, 988, 1447, 1485, 1612
BstMAI GTCTC 3 cut(s) 943, 1039, 1175
BstMBI GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
BstMWI GCNNNNNNNGC 4 cut(s) 841, 1535, 1570, 1596
BstNI CCWGG 3 cut(s) 17, 874, 892
BstNSI RCATGY 1 cut(s) 1156
BstSCI CCNGG 3 cut(s) 15, 872, 890
BstSFI CTRYAG 1 cut(s) 364
BstSLI GKGCMC 2 cut(s) 846, 973
BstV1I GCAGC 2 cut(s) 1602, 1637
BstX2I RGATCY 3 cut(s) 671, 865, 1482
BstYI RGATCY 3 cut(s) 671, 865, 1482
BsuI GTATCC 1 cut(s) 1024
BsuRI GGCC 3 cut(s) 549, 844, 1176
BtgI CCRYGG 1 cut(s) 1253
BtsCI GGATG 2 cut(s) 1401, 1563
BtsI GCAGTG 1 cut(s) 768
BtsIMutI CAGTG 6 cut(s) 273, 755, 768, 926, 1434, 1644
Cac8I GCNNGC 4 cut(s) 372, 759, 1000, 1691
CaiI CAGNNNCTG 2 cut(s) 701, 1646
CciI TCATGA 1 cut(s) 982
Cfr13I GGNCC 4 cut(s) 797, 842, 843, 1366
CseI GACGC 1 cut(s) 363
Csp6I GTAC 3 cut(s) 24, 732, 1156
CspCI CAANNNNNGTGG 2 cut(s) 273, 308
CviQI GTAC 3 cut(s) 24, 732, 1156
DdeI CTNAG 4 cut(s) 27, 36, 1219, 1313
DpnI GATC 8 cut(s) 194, 673, 867, 918, 987, 1446, 1484, 1611
DpnII GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
DraI TTTAAA 1 cut(s) 1533
EaeI YGGCCR 1 cut(s) 547
Eco130I CCWWGG 3 cut(s) 121, 861, 1253
Eco147I AGGCCT 1 cut(s) 1176
Eco24I GRGCYC 1 cut(s) 846
Eco47I GGWCC 2 cut(s) 797, 1366
Eco57I CTGAAG 1 cut(s) 950
EcoNI CCTNNNNNAGG 1 cut(s) 1218
EcoO109I RGGNCCY 2 cut(s) 797, 842
EcoRII CCWGG 3 cut(s) 15, 872, 890
EcoT14I CCWWGG 3 cut(s) 121, 861, 1253
EcoT22I ATGCAT 1 cut(s) 1192
EcoT38I GRGCYC 1 cut(s) 846
ErhI CCWWGG 3 cut(s) 121, 861, 1253
FalI AAGNNNNNCTT 2 cut(s) 549, 581
FaqI GGGAC 2 cut(s) 534, 908
FauI CCCGC 1 cut(s) 750
FbaI TGATCA 2 cut(s) 192, 1609
FblI GTMKAC 1 cut(s) 57
Fnu4HI GCNGC 3 cut(s) 1565, 1591, 1626
FokI GGATG 2 cut(s) 1408, 1570
FriOI GRGCYC 1 cut(s) 846
Fsp4HI GCNGC 3 cut(s) 1565, 1591, 1626
FspBI CTAG 6 cut(s) 240, 332, 999, 1035, 1167, 1320
GluI GCNGC 3 cut(s) 1565, 1591, 1626
GsaI CCCAGC 1 cut(s) 612
GsuI CTGGAG 1 cut(s) 723
HaeIII GGCC 3 cut(s) 549, 844, 1176
HapII CCGG 2 cut(s) 1128, 1555
HgaI GACGC 1 cut(s) 363
HindIII AAGCTT 3 cut(s) 1307, 1500, 1571
HinfI GANTC 5 cut(s) 146, 212, 1331, 1417, 1636
HpaII CCGG 2 cut(s) 1128, 1555
HphI GGTGA 3 cut(s) 31, 1475, 1661
Hpy166II GTNNAC 3 cut(s) 58, 1366, 1673
Hpy188I TCNGA 8 cut(s) 133, 145, 211, 301, 309, 379, 460, 1015
Hpy188III TCNNGA 6 cut(s) 178, 196, 450, 669, 983, 1486
Hpy8I GTNNAC 3 cut(s) 58, 1366, 1673
HpyAV CCTTC 6 cut(s) 290, 388, 469, 641, 761, 1463
HpyCH4III ACNGT 9 cut(s) 231, 430, 571, 625, 717, 904, 994, 1545, 1670
HpyCH4IV ACGT 4 cut(s) 356, 523, 1342, 1675
HpyCH4V TGCA 9 cut(s) 173, 662, 684, 695, 1145, 1190, 1289, 1625, 1679
HpyF10VI GCNNNNNNNGC 4 cut(s) 841, 1535, 1570, 1596
HpyF3I CTNAG 4 cut(s) 27, 36, 1219, 1313
HpySE526I ACGT 4 cut(s) 356, 523, 1342, 1675
Ksp22I TGATCA 2 cut(s) 192, 1609
Kzo9I GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
LmnI GCTCC 1 cut(s) 832
Lsp1109I GCAGC 2 cut(s) 1602, 1637
LweI GCATC 1 cut(s) 671
MaeI CTAG 6 cut(s) 240, 332, 999, 1035, 1167, 1320
MaeII ACGT 4 cut(s) 356, 523, 1342, 1675
MaeIII GTNAC 6 cut(s) 924, 1079, 1398, 1463, 1642, 1649
MalI GATC 8 cut(s) 194, 673, 867, 918, 987, 1446, 1484, 1611
MbiI CCGCTC 1 cut(s) 1516
MboI GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
MboII GAAGA 5 cut(s) 656, 657, 1148, 1426, 1645
MflI RGATCY 3 cut(s) 671, 865, 1482
MhlI GDGCHC 3 cut(s) 846, 973, 1072
MlsI TGGCCA 1 cut(s) 549
MluNI TGGCCA 1 cut(s) 549
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 2 cut(s) 458, 1527
Mox20I TGGCCA 1 cut(s) 549
Mph1103I ATGCAT 1 cut(s) 1192
MroXI GAANNNNTTC 2 cut(s) 561, 771
MscI TGGCCA 1 cut(s) 549
MseI TTAA 4 cut(s) 255, 792, 1356, 1532
MslI CAYNNNNRTG 2 cut(s) 931, 1427
Msp20I TGGCCA 1 cut(s) 549
MspI CCGG 2 cut(s) 1128, 1555
MspR9I CCNGG 3 cut(s) 17, 874, 892
Mva1269I GAATGC 1 cut(s) 17
MvaI CCWGG 3 cut(s) 17, 874, 892
MwoI GCNNNNNNNGC 4 cut(s) 841, 1535, 1570, 1596
NcoI CCATGG 1 cut(s) 1253
NdeII GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 7 cut(s) 84, 798, 843, 844, 889, 1212, 1383
NmuCI GTSAC 4 cut(s) 924, 1463, 1642, 1649
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 1 cut(s) 1156
OliI CACNNNNGTG 1 cut(s) 931
PagI TCATGA 1 cut(s) 982
PceI AGGCCT 1 cut(s) 1176
PciI ACATGT 1 cut(s) 1152
PctI GAATGC 1 cut(s) 17
PdmI GAANNNNTTC 2 cut(s) 561, 771
PfeI GAWTC 4 cut(s) 146, 1331, 1417, 1636
PflMI CCANNNNNTGG 1 cut(s) 1646
PkrI GCNGC 3 cut(s) 1566, 1592, 1627
PleI GAGTC 1 cut(s) 206
PpsI GAGTC 1 cut(s) 206
PpuMI RGGWCCY 1 cut(s) 797
PscI ACATGT 1 cut(s) 1152
Psp1406I AACGTT 1 cut(s) 1342
Psp5II RGGWCCY 1 cut(s) 797
Psp6I CCWGG 3 cut(s) 15, 872, 890
PspFI CCCAGC 1 cut(s) 608
PspGI CCWGG 3 cut(s) 15, 872, 890
PspN4I GGNNCC 7 cut(s) 84, 798, 843, 844, 889, 1212, 1383
PspOMI GGGCCC 1 cut(s) 842
PspPI GGNCC 4 cut(s) 797, 842, 843, 1366
PspPPI RGGWCCY 1 cut(s) 797
PstNI CAGNNNCTG 2 cut(s) 701, 1646
PsuI RGATCY 3 cut(s) 671, 865, 1482
RsaI GTAC 3 cut(s) 25, 733, 1157
RsaNI GTAC 3 cut(s) 24, 732, 1156
RseI CAYNNNNRTG 2 cut(s) 931, 1427
SaqAI TTAA 4 cut(s) 255, 792, 1356, 1532
SatI GCNGC 3 cut(s) 1565, 1591, 1626
Sau3AI GATC 8 cut(s) 192, 671, 865, 916, 985, 1444, 1482, 1609
Sau96I GGNCC 4 cut(s) 797, 842, 843, 1366
ScaI AGTACT 1 cut(s) 25
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 3 cut(s) 17, 874, 892
SduI GDGCHC 3 cut(s) 846, 973, 1072
SfaNI GCATC 1 cut(s) 671
SfcI CTRYAG 1 cut(s) 364
SinI GGWCC 2 cut(s) 797, 1366
SmiMI CAYNNNNRTG 2 cut(s) 931, 1427
SmlI CTYRAG 1 cut(s) 1178
SmoI CTYRAG 1 cut(s) 1178
SpeI ACTAGT 2 cut(s) 1034, 1166
SseBI AGGCCT 1 cut(s) 1176
SsiI CCGC 5 cut(s) 588, 757, 1369, 1516, 1564
SspMI CTAG 6 cut(s) 240, 332, 999, 1035, 1167, 1320
StuI AGGCCT 1 cut(s) 1176
StyD4I CCNGG 3 cut(s) 15, 872, 890
StyI CCWWGG 3 cut(s) 121, 861, 1253
TaaI ACNGT 9 cut(s) 231, 430, 571, 625, 717, 904, 994, 1545, 1670
TaiI ACGT 4 cut(s) 359, 526, 1345, 1678
TaqI TCGA 2 cut(s) 179, 823
TatI WGTACW 1 cut(s) 23
TauI GCSGC 1 cut(s) 1567
TfiI GAWTC 4 cut(s) 146, 1331, 1417, 1636
Tru1I TTAA 4 cut(s) 255, 792, 1356, 1532
Tru9I TTAA 4 cut(s) 255, 792, 1356, 1532
TscAI CASTG 6 cut(s) 280, 755, 768, 933, 1434, 1651
TseFI GTSAC 4 cut(s) 924, 1463, 1642, 1649
TseI GCWGC 2 cut(s) 1590, 1625
Tsp45I GTSAC 4 cut(s) 924, 1463, 1642, 1649
TspDTI ATGAA 6 cut(s) 138, 333, 570, 1052, 1338, 1565
TspGWI ACGGA 1 cut(s) 680
TspRI CASTG 6 cut(s) 280, 755, 768, 933, 1434, 1651
Van91I CCANNNNNTGG 1 cut(s) 1646
VpaK11BI GGWCC 2 cut(s) 797, 1366
XagI CCTNNNNNAGG 1 cut(s) 1218
XapI RAATTY 6 cut(s) 5, 40, 303, 310, 421, 479
XceI RCATGY 1 cut(s) 1156
XmiI GTMKAC 1 cut(s) 57
XmnI GAANNNNTTC 2 cut(s) 561, 771
XspI CTAG 6 cut(s) 240, 332, 999, 1035, 1167, 1320
ZrmI AGTACT 1 cut(s) 25
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.