Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008701

Physical Location & Seq

Genomic Coordinates Forward (+)

7301224 .. 7303876

Gene Structure 2653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G22050.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

ATGGATGATCGCCTTCGCTTAAGCCGCAGAATCCGCTTTCTTCTTCTTGCTTGGCTCCGTCGTTCTCGCTCCGGAAGAATAGAGTTTATCAGACGATTTGGATACAAGGAAATAATCAAAGCAACAGAAGGTTTCCGTAAGGTTATTTACACCAACTATCACGGGTCTGCATACAGAGCTAAATTCAAAGGTGGTGAGGTTGCTTTGGTCAAAGAACTCACTGCTCTTGATCTTGGACGAGAAAGGTTTGATGAGGAAGTTCAGCTTTTGGGTCGCTTACGTCACCGTCATCTCCTTACACTTCGTGGGTTTTGCATTGGACGAAAGAGGCTGCTAGTGTTTGACAACATTGAAAATGGAAGTTTAAAAGAACACCTCAATGATCCGCTTAAGACTCCTTTAAATTGGAAGACTCGCATTCAGATAGCTATTGGAGTCGCAGCTGCATTAGAATACTTGCTAGTCTTCAGCAGTAATGATGCACAGATATATGATGTTTCAGTGAACTCATGTAACATCATGTTGGATGAAAACTTCACCCCCAAAATATCCGCGTCAACAGACATCCAAAAAACCATCCGAAAGCAACCCATGATTCTTGTTCTGAAGGAATGTGGAAACGTGATATTCCAACTAGGAGTGTTGATGTTGGAGCTGATCACAGGACAATCATCAGACAGACAAGGCAATGACTTGATCGAATGGGTACAAGACTCGTGTATTGCAAACTCAATTGATAAGATGATTGATCCAGATTTAGGTAACAACTATAGCTCTAGAGAACTCCAGAAAGTCTTAGCCGTGGCTCGACTCTGCATAAAAACGAGGTATGAGCCTCCTTCATTCTCAATTACACATGTATACCGGTATCTACAGAAGAAGATCGATGTTGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

299

Amino Acids

34.48

Weight (kDa)

9.58

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	61 - 198	3e-13	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	80 - 235	4.6e-07	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008701)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22050 AT5G22050
fragaria_vesca	FvH4_3g26180 FvH4_3g26180 FvH4_3g26180 FvH4_3g26180 FvH4_3g26180
malus_domestica	MD03G1159200.v1.1
prunus_persica	Prupe.6G147000_v2.0.a1 Prupe.6G147000_v2.0.a1 Prupe.6G147000_v2.0.a1 Prupe.6G147000_v2.0.a1
pyrus_communis	pycom03g11150
rosa_chinensis	RchiOBHm_Chr5g0049031
rosa_laevigata	RLG00000034585
rosa_multiflora	Rmu_sc0004522.1_g000006
rosa_roxburghii	Rroxscaffold_1G00032840
rosa_rugosa	Rorug05G0242400
rosa_samantha	Rh5AG322300 Rh5BG332500 Rh5CG357700 Rh5DG344200
rosa_wichuraiana	Rw5G030410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	861
AccII	CGCG	1 cut(s)	554
AccIII	TCCGGA	1 cut(s)	71
AciI	CCGC	4 cut(s)	25, 34, 386, 552
AclWI	GGATC	2 cut(s)	377, 743
AcsI	RAATTY	1 cut(s)	182
AcuI	CTGAAG	2 cut(s)	451, 626
AdeI	CACNNNGTG	1 cut(s)	305
AfaI	GTAC	1 cut(s)	708
AfiI	CCNNNNNNNGG	1 cut(s)	758
AflII	CTTAAG	2 cut(s)	19, 389
AflIII	ACRYGT	1 cut(s)	856
AgeI	ACCGGT	1 cut(s)	864
AgsI	TTSAA	2 cut(s)	187, 353
AluBI	AGCT	6 cut(s)	179, 265, 428, 443, 655, 774
AluI	AGCT	6 cut(s)	179, 265, 428, 443, 655, 774
AlwI	GGATC	2 cut(s)	377, 743
Aor13HI	TCCGGA	1 cut(s)	71
ApeKI	GCWGC	3 cut(s)	331, 440, 443
ApoI	RAATTY	1 cut(s)	182
AsiGI	ACCGGT	1 cut(s)	864
AsuHPI	GGTGA	3 cut(s)	206, 275, 529
BauI	CACGAG	1 cut(s)	715
BbsI	GAAGAC	2 cut(s)	416, 457
BbvI	GCAGC	3 cut(s)	318, 430, 452
BccI	CCATC	1 cut(s)	584
BceAI	ACGGC	1 cut(s)	785
BciVI	GTATCC	1 cut(s)	95
BclI	TGATCA	1 cut(s)	657
BfaI	CTAG	4 cut(s)	335, 461, 635, 777
BfmI	CTRYAG	2 cut(s)	769, 872
BfrI	CTTAAG	2 cut(s)	19, 389
BfuI	GTATCC	1 cut(s)	95
BisI	GCNGC	4 cut(s)	25, 332, 441, 444
BlsI	GCNGC	4 cut(s)	26, 333, 442, 445
BmiI	GGNNCC	1 cut(s)	56
BmsI	GCATC	1 cut(s)	469
BpiI	GAAGAC	2 cut(s)	416, 457
BpmI	CTGGAG	1 cut(s)	770
Bsa29I	ATCGAT	1 cut(s)	885
BsaJI	CCNNGG	1 cut(s)	801
BsaWI	WCCGGW	2 cut(s)	71, 864
Bsc4I	CCNNNNNNNGG	1 cut(s)	758
Bse118I	RCCGGY	1 cut(s)	864
Bse3DI	GCAATG	1 cut(s)	694
BseAI	TCCGGA	1 cut(s)	71
BseCI	ATCGAT	1 cut(s)	885
BseDI	CCNNGG	1 cut(s)	801
BseGI	GGATG	4 cut(s)	10, 532, 564, 576
BseLI	CCNNNNNNNGG	1 cut(s)	758
BseMI	GCAATG	1 cut(s)	694
BseXI	GCAGC	3 cut(s)	318, 430, 452
Bsh1236I	CGCG	1 cut(s)	554
BshTI	ACCGGT	1 cut(s)	864
BshVI	ATCGAT	1 cut(s)	885
BsiSI	CCGG	2 cut(s)	72, 865
BslI	CCNNNNNNNGG	1 cut(s)	758
BsmI	GAATGC	1 cut(s)	417
Bsp13I	TCCGGA	1 cut(s)	71
Bsp143I	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
BspACI	CCGC	4 cut(s)	25, 34, 386, 552
BspDI	ATCGAT	1 cut(s)	885
BspEI	TCCGGA	1 cut(s)	71
BspFNI	CGCG	1 cut(s)	554
BspLI	GGNNCC	1 cut(s)	56
BspPI	GGATC	2 cut(s)	377, 743
BspTI	CTTAAG	2 cut(s)	19, 389
BsrDI	GCAATG	1 cut(s)	694
BsrFI	RCCGGY	1 cut(s)	864
BssAI	RCCGGY	1 cut(s)	864
BssECI	CCNNGG	1 cut(s)	801
BssMI	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
BssNAI	GTATAC	1 cut(s)	862
BssSI	CACGAG	1 cut(s)	715
Bst1107I	GTATAC	1 cut(s)	862
Bst2BI	CACGAG	1 cut(s)	715
Bst4CI	ACNGT	1 cut(s)	287
BstAFI	CTTAAG	2 cut(s)	19, 389
BstDEI	CTNAG	1 cut(s)	796
BstDSI	CCRYGG	1 cut(s)	801
BstF5I	GGATG	4 cut(s)	10, 532, 564, 576
BstFNI	CGCG	1 cut(s)	554
BstKTI	GATC	7 cut(s)	10, 232, 385, 660, 699, 751, 885
BstMBI	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
BstMWI	GCNNNNNNNGC	3 cut(s)	24, 33, 176
BstNSI	RCATGY	1 cut(s)	860
BstSFI	CTRYAG	2 cut(s)	769, 872
BstUI	CGCG	1 cut(s)	554
BstV1I	GCAGC	3 cut(s)	318, 430, 452
BstV2I	GAAGAC	2 cut(s)	416, 457
BstZ17I	GTATAC	1 cut(s)	862
Bsu15I	ATCGAT	1 cut(s)	885
BsuI	GTATCC	1 cut(s)	95
BsuTUI	ATCGAT	1 cut(s)	885
BtgI	CCRYGG	1 cut(s)	801
BtsCI	GGATG	4 cut(s)	10, 532, 564, 576
BtsI	GCAGTG	1 cut(s)	219
BtsIMutI	CAGTG	2 cut(s)	219, 507
Cfr10I	RCCGGY	1 cut(s)	864
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	1 cut(s)	543
Csp6I	GTAC	1 cut(s)	707
CspAI	ACCGGT	1 cut(s)	864
CviAII	CATG	4 cut(s)	510, 520, 592, 857
CviQI	GTAC	1 cut(s)	707
DdeI	CTNAG	1 cut(s)	796
DpnI	GATC	7 cut(s)	9, 231, 384, 659, 698, 750, 884
DpnII	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
DraI	TTTAAA	2 cut(s)	366, 402
DraIII	CACNNNGTG	1 cut(s)	305
Eco57I	CTGAAG	2 cut(s)	451, 626
FaeI	CATG	4 cut(s)	513, 523, 595, 860
FalI	AAGNNNNNCTT	2 cut(s)	249, 281
FatI	CATG	4 cut(s)	509, 519, 591, 856
FbaI	TGATCA	1 cut(s)	657
FblI	GTMKAC	1 cut(s)	861
Fnu4HI	GCNGC	4 cut(s)	25, 332, 441, 444
FokI	GGATG	4 cut(s)	17, 539, 551, 563
Fsp4HI	GCNGC	4 cut(s)	25, 332, 441, 444
FspBI	CTAG	4 cut(s)	335, 461, 635, 777
GluI	GCNGC	4 cut(s)	25, 332, 441, 444
GsuI	CTGGAG	1 cut(s)	770
HapII	CCGG	2 cut(s)	72, 865
HgaI	GACGC	1 cut(s)	543
Hin1II	CATG	4 cut(s)	513, 523, 595, 860
HincII	GTYRAC	1 cut(s)	558
HindII	GTYRAC	1 cut(s)	558
HinfI	GANTC	7 cut(s)	30, 394, 412, 435, 595, 713, 810
HpaII	CCGG	2 cut(s)	72, 865
HphI	GGTGA	3 cut(s)	206, 275, 529
Hpy166II	GTNNAC	3 cut(s)	505, 558, 862
Hpy188I	TCNGA	5 cut(s)	92, 423, 581, 606, 676
Hpy188III	TCNNGA	5 cut(s)	72, 227, 752, 777, 787
Hpy8I	GTNNAC	3 cut(s)	505, 558, 862
Hpy99I	CGWCG	1 cut(s)	63
HpyAV	CCTTC	4 cut(s)	23, 122, 601, 849
HpyCH4III	ACNGT	1 cut(s)	287
HpyCH4IV	ACGT	2 cut(s)	280, 621
HpyCH4V	TGCA	7 cut(s)	170, 315, 446, 482, 725, 816, 893
HpyF10VI	GCNNNNNNNGC	3 cut(s)	24, 33, 176
HpyF3I	CTNAG	1 cut(s)	796
HpySE526I	ACGT	2 cut(s)	280, 621
Hsp92II	CATG	4 cut(s)	513, 523, 595, 860
Kpn2I	TCCGGA	1 cut(s)	71
Ksp22I	TGATCA	1 cut(s)	657
Kzo9I	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
LmnI	GCTCC	3 cut(s)	60, 74, 652
LpnPI	CCDG	5 cut(s)	85, 648, 765, 800, 878
Lsp1109I	GCAGC	3 cut(s)	318, 430, 452
LweI	GCATC	1 cut(s)	469
MaeI	CTAG	4 cut(s)	335, 461, 635, 777
MaeII	ACGT	2 cut(s)	280, 621
MaeIII	GTNAC	3 cut(s)	281, 512, 761
MalI	GATC	7 cut(s)	9, 231, 384, 659, 698, 750, 884
MboI	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
MboII	GAAGA	7 cut(s)	32, 35, 87, 421, 457, 889, 892
MfeI	CAATTG	1 cut(s)	732
MluCI	AATT	4 cut(s)	182, 403, 732, 849
MlyI	GAGTC	5 cut(s)	388, 406, 444, 707, 804
MmeI	TCCRAC	3 cut(s)	504, 630, 655
MnlI	CCTC	6 cut(s)	190, 247, 321, 386, 819, 846
MroI	TCCGGA	1 cut(s)	71
MseI	TTAA	4 cut(s)	20, 365, 390, 401
MslI	CAYNNNNRTG	1 cut(s)	378
MspA1I	CMGCKG	1 cut(s)	443
MspCI	CTTAAG	2 cut(s)	19, 389
MspI	CCGG	2 cut(s)	72, 865
MunI	CAATTG	1 cut(s)	732
Mva1269I	GAATGC	1 cut(s)	417
MvnI	CGCG	1 cut(s)	554
MwoI	GCNNNNNNNGC	3 cut(s)	24, 33, 176
NdeII	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
NlaIII	CATG	4 cut(s)	513, 523, 595, 860
NlaIV	GGNNCC	1 cut(s)	56
NmuCI	GTSAC	1 cut(s)	281
NspI	RCATGY	1 cut(s)	860
PciI	ACATGT	1 cut(s)	856
PctI	GAATGC	1 cut(s)	417
PfeI	GAWTC	2 cut(s)	30, 595
PinAI	ACCGGT	1 cut(s)	864
PkrI	GCNGC	4 cut(s)	26, 333, 442, 445
PleI	GAGTC	5 cut(s)	388, 406, 443, 707, 804
PpsI	GAGTC	5 cut(s)	388, 406, 443, 707, 804
PscI	ACATGT	1 cut(s)	856
PspN4I	GGNNCC	1 cut(s)	56
PvuII	CAGCTG	1 cut(s)	443
RsaI	GTAC	1 cut(s)	708
RsaNI	GTAC	1 cut(s)	707
RseI	CAYNNNNRTG	1 cut(s)	378
SaqAI	TTAA	4 cut(s)	20, 365, 390, 401
SatI	GCNGC	4 cut(s)	25, 332, 441, 444
Sau3AI	GATC	7 cut(s)	7, 229, 382, 657, 696, 748, 882
SchI	GAGTC	5 cut(s)	388, 406, 444, 707, 804
SfaNI	GCATC	1 cut(s)	469
SfcI	CTRYAG	2 cut(s)	769, 872
SmiMI	CAYNNNNRTG	1 cut(s)	378
SmlI	CTYRAG	2 cut(s)	19, 389
SmoI	CTYRAG	2 cut(s)	19, 389
Sse9I	AATT	4 cut(s)	182, 403, 732, 849
SsiI	CCGC	4 cut(s)	25, 34, 386, 552
SspMI	CTAG	4 cut(s)	335, 461, 635, 777
TaaI	ACNGT	1 cut(s)	287
TaiI	ACGT	2 cut(s)	283, 624
TaqI	TCGA	3 cut(s)	699, 808, 885
TasI	AATT	4 cut(s)	182, 403, 732, 849
TauI	GCSGC	1 cut(s)	27
TfiI	GAWTC	2 cut(s)	30, 595
Tru1I	TTAA	4 cut(s)	20, 365, 390, 401
Tru9I	TTAA	4 cut(s)	20, 365, 390, 401
TscAI	CASTG	2 cut(s)	226, 507
TseFI	GTSAC	1 cut(s)	281
TseI	GCWGC	3 cut(s)	331, 440, 443
Tsp45I	GTSAC	1 cut(s)	281
TspDTI	ATGAA	2 cut(s)	543, 831
TspGWI	ACGGA	2 cut(s)	47, 125
TspRI	CASTG	2 cut(s)	226, 507
Vha464I	CTTAAG	2 cut(s)	19, 389
XapI	RAATTY	1 cut(s)	182
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	1 cut(s)	860
XmiI	GTMKAC	1 cut(s)	861
XspI	CTAG	4 cut(s)	335, 461, 635, 777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.