Prupe.6G147000_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0008701
Physical Location & Seq
Reverse (-)
12190881 .. 12196891
6011 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G147000.1

Sequence Viewer

Length: 909 bp
ATGGACCACCGCTTGATCCGCAAGCTCCGGCCTCGTCTTCTCGCGTGGCTTCGCCGATCTCGGTCTGGCAGGGTATTATTTATGAAGCGTTTTCCATACAAGGATATAAAGAGAGCAACAGATGGTTTTCAGAGTATCATGTATACCACTTCTCATATAGCTGCTTACAAGGCCAGATTTCAAGATGGTGGGGTTGTATTGATAAAAGAAATGAGAGATTACGATCAAGGAAAAGATGCCTTCTACAGAGAAGTGCAACTCTTGGGGCGCTTGCATCATCGCCACCTTCTTGCTCTCAAGGGGTTCTCTACTGGACATAGACGGTTGCTAGTTTTTGACAACATAGAAAGAGGGAGCTTGAAGGAGCATCTTACTGATCCCATTAGAACTCCCTTGGACTGGAAGACAAGGCTACAAATAGTCATTGGTGTGGTAGCTGCATTGGAATATTTGCTTCTCTTCAATGAACCTCCAATGTATCATGTCTCCATTAGCTCAAGTAGCATCATGCTAGATGAAAACTTTAATGCAAAGCTTTCAGACGTTGGCCTTCAAAGTTCTGGTGAAAATTATGTCACAGTACCTCATACCTCATGCGCTAAAGATTGCATGGGTCAGGAATGCGGTAACATCATGTTCCAGCTTGGGGTGCTGATACTGGAGCTCGTCACCGGTCAGTCATCAGATGACAGGGCTGCTGATCTGGTTCAATGGATCCGAGAGTATCGCTTCTGTAGCTCCATTCACAAGATGCTAGATCCTGATCTAGGTAATAGTTATGATTCTAGGGAGCTTAAAAGTCTTCTAGCTGTGGCAAAGTTGTGTGTTAGATATGGGGATAAGCCAAAGACTTCTATCCTGCAGGTACTTCGGTATCTCCATAAAAAGATAGAAAGCCCACATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

303

Amino Acids

34.8

Weight (kDa)

9.41

Isoelectric Point (pI)

50.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 853
AccI GTMKAC 1 cut(s) 143
AccII CGCG 1 cut(s) 44
AciI CCGC 3 cut(s) 10, 19, 624
AclWI GGATC 5 cut(s) 10, 371, 709, 722, 752
AfaI GTAC 2 cut(s) 582, 867
AfiI CCNNNNNNNGG 3 cut(s) 399, 646, 767
AgeI ACCGGT 1 cut(s) 671
AgsI TTSAA 5 cut(s) 182, 361, 463, 554, 710
Alw21I GWGCWC 1 cut(s) 666
Alw26I GTCTC 1 cut(s) 490
AlwI GGATC 5 cut(s) 10, 371, 709, 722, 752
AoxI GGCC 3 cut(s) 29, 171, 547
ApeKI GCWGC 3 cut(s) 161, 437, 695
AsiGI ACCGGT 1 cut(s) 671
AspLEI GCGC 2 cut(s) 270, 599
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 575, 661
AvaII GGWCC 1 cut(s) 4
BaeI ACNNNNGTAYC 4 cut(s) 857, 857, 890, 890
BamHI GGATCC 1 cut(s) 714
BanII GRGCYC 1 cut(s) 666
BbsI GAAGAC 3 cut(s) 29, 410, 794
Bbv12I GWGCWC 1 cut(s) 666
BbvI GCAGC 3 cut(s) 148, 424, 682
BccI CCATC 2 cut(s) 116, 179
BcgI CGANNNNNNTGC 2 cut(s) 851, 885
BcoDI GTCTC 1 cut(s) 490
BfaI CTAG 7 cut(s) 329, 512, 755, 767, 786, 806, 907
BfmI CTRYAG 3 cut(s) 244, 733, 860
BfoI RGCGCY 1 cut(s) 271
BfuAI ACCTGC 1 cut(s) 853
BisI GCNGC 3 cut(s) 162, 438, 696
BlsI GCNGC 3 cut(s) 163, 439, 697
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 716
BmsI GCATC 5 cut(s) 226, 283, 376, 513, 741
BpiI GAAGAC 3 cut(s) 29, 410, 794
BpmI CTGGAG 1 cut(s) 680
BpuEI CTTGAG 2 cut(s) 281, 481
BsaBI GATNNNNATC 2 cut(s) 222, 762
BsaJI CCNNGG 1 cut(s) 393
BsaWI WCCGGW 1 cut(s) 671
Bsc4I CCNNNNNNNGG 3 cut(s) 399, 646, 767
Bse118I RCCGGY 1 cut(s) 671
Bse1I ACTGG 3 cut(s) 316, 404, 663
Bse8I GATNNNNATC 2 cut(s) 222, 762
BseDI CCNNGG 1 cut(s) 393
BseJI GATNNNNATC 2 cut(s) 222, 762
BseLI CCNNNNNNNGG 3 cut(s) 399, 646, 767
BseNI ACTGG 3 cut(s) 316, 404, 663
BseXI GCAGC 3 cut(s) 148, 424, 682
Bsh1236I CGCG 1 cut(s) 44
BshFI GGCC 3 cut(s) 31, 173, 549
BshTI ACCGGT 1 cut(s) 671
BsiHKAI GWGCWC 1 cut(s) 666
BsiSI CCGG 2 cut(s) 28, 672
BslI CCNNNNNNNGG 3 cut(s) 399, 646, 767
BsmAI GTCTC 1 cut(s) 490
BsmI GAATGC 1 cut(s) 626
BsnI GGCC 3 cut(s) 31, 173, 549
Bsp1286I GDGCHC 1 cut(s) 666
Bsp143I GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
BspACI CCGC 3 cut(s) 10, 19, 624
BspANI GGCC 3 cut(s) 31, 173, 549
BspFNI CGCG 1 cut(s) 44
BspLI GGNNCC 1 cut(s) 716
BspMAI CTGCAG 1 cut(s) 864
BspMI ACCTGC 1 cut(s) 853
BspPI GGATC 5 cut(s) 10, 371, 709, 722, 752
BsrFI RCCGGY 1 cut(s) 671
BsrI ACTGG 3 cut(s) 316, 404, 663
BssAI RCCGGY 1 cut(s) 671
BssECI CCNNGG 1 cut(s) 393
BssMI GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
BssNAI GTATAC 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 393
Bst1107I GTATAC 1 cut(s) 144
Bst4CI ACNGT 2 cut(s) 324, 580
Bst6I CTCTTC 1 cut(s) 464
BstC8I GCNNGC 2 cut(s) 23, 272
BstENI CCTNNNNNAGG 1 cut(s) 765
BstFNI CGCG 1 cut(s) 44
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 2 cut(s) 270, 599
BstKTI GATC 8 cut(s) 18, 59, 226, 379, 703, 717, 760, 766
BstMAI GTCTC 1 cut(s) 490
BstMBI GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
BstMWI GCNNNNNNNGC 5 cut(s) 18, 170, 501, 649, 735
BstSFI CTRYAG 3 cut(s) 244, 733, 860
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 3 cut(s) 148, 424, 682
BstV2I GAAGAC 3 cut(s) 29, 410, 794
BstX2I RGATCY 2 cut(s) 714, 757
BstYI RGATCY 2 cut(s) 714, 757
BstZ17I GTATAC 1 cut(s) 144
BsuRI GGCC 3 cut(s) 31, 173, 549
BtgZI GCGATG 1 cut(s) 263
BveI ACCTGC 1 cut(s) 853
Cac8I GCNNGC 2 cut(s) 23, 272
CfoI GCGC 2 cut(s) 270, 599
Cfr10I RCCGGY 1 cut(s) 671
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 2 cut(s) 581, 866
CspAI ACCGGT 1 cut(s) 671
CviAII CATG 7 cut(s) 139, 482, 508, 594, 610, 634, 902
CviQI GTAC 2 cut(s) 581, 866
DpnI GATC 8 cut(s) 17, 58, 225, 378, 702, 716, 759, 765
DpnII GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
Eam1104I CTCTTC 1 cut(s) 464
EarI CTCTTC 1 cut(s) 464
Ecl136II GAGCTC 1 cut(s) 664
Eco130I CCWWGG 1 cut(s) 393
Eco24I GRGCYC 1 cut(s) 666
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 664
EcoICRI GAGCTC 1 cut(s) 664
EcoNI CCTNNNNNAGG 1 cut(s) 765
EcoT14I CCWWGG 1 cut(s) 393
EcoT38I GRGCYC 1 cut(s) 666
ErhI CCWWGG 1 cut(s) 393
FaeI CATG 7 cut(s) 142, 485, 511, 597, 613, 637, 905
FatI CATG 7 cut(s) 138, 481, 507, 593, 609, 633, 901
FblI GTMKAC 1 cut(s) 143
Fnu4HI GCNGC 3 cut(s) 162, 438, 696
FriOI GRGCYC 1 cut(s) 666
Fsp4HI GCNGC 3 cut(s) 162, 438, 696
FspBI CTAG 7 cut(s) 329, 512, 755, 767, 786, 806, 907
GlaI GCGC 2 cut(s) 269, 598
GluI GCNGC 3 cut(s) 162, 438, 696
GsuI CTGGAG 1 cut(s) 680
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 3 cut(s) 31, 173, 549
HapII CCGG 2 cut(s) 28, 672
HhaI GCGC 2 cut(s) 270, 599
Hin1II CATG 7 cut(s) 142, 485, 511, 597, 613, 637, 905
Hin6I GCGC 2 cut(s) 268, 597
HinP1I GCGC 2 cut(s) 268, 597
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 1 cut(s) 782
HpaII CCGG 2 cut(s) 28, 672
HphI GGTGA 2 cut(s) 575, 661
Hpy166II GTNNAC 1 cut(s) 144
Hpy188I TCNGA 4 cut(s) 132, 541, 685, 719
Hpy188III TCNNGA 3 cut(s) 182, 617, 761
Hpy8I GTNNAC 1 cut(s) 144
HpyAV CCTTC 4 cut(s) 250, 296, 355, 560
HpyCH4III ACNGT 2 cut(s) 324, 580
HpyCH4IV ACGT 1 cut(s) 543
HpyCH4V TGCA 6 cut(s) 256, 274, 440, 530, 609, 862
HpyF10VI GCNNNNNNNGC 5 cut(s) 18, 170, 501, 649, 735
HpySE526I ACGT 1 cut(s) 543
Hsp92II CATG 7 cut(s) 142, 485, 511, 597, 613, 637, 905
HspAI GCGC 2 cut(s) 268, 597
Kzo9I GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
LmnI GCTCC 6 cut(s) 30, 354, 364, 661, 743, 790
Lsp1109I GCAGC 3 cut(s) 148, 424, 682
LweI GCATC 5 cut(s) 226, 283, 376, 513, 741
MaeI CTAG 7 cut(s) 329, 512, 755, 767, 786, 806, 907
MaeII ACGT 1 cut(s) 543
MaeIII GTNAC 3 cut(s) 574, 626, 667
MalI GATC 8 cut(s) 17, 58, 225, 378, 702, 716, 759, 765
MboI GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
MboII GAAGA 4 cut(s) 29, 415, 451, 794
MflI RGATCY 2 cut(s) 714, 757
MhlI GDGCHC 1 cut(s) 666
MluCI AATT 1 cut(s) 568
MnlI CCTC 5 cut(s) 42, 344, 480, 594, 601
MseI TTAA 2 cut(s) 525, 795
MslI CAYNNNNRTG 1 cut(s) 428
MspI CCGG 2 cut(s) 28, 672
Mva1269I GAATGC 1 cut(s) 626
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 5 cut(s) 18, 170, 501, 649, 735
NdeII GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
NlaIII CATG 7 cut(s) 142, 485, 511, 597, 613, 637, 905
NlaIV GGNNCC 1 cut(s) 716
NmuCI GTSAC 2 cut(s) 574, 667
PctI GAATGC 1 cut(s) 626
PfeI GAWTC 1 cut(s) 782
PinAI ACCGGT 1 cut(s) 671
PkrI GCNGC 3 cut(s) 163, 439, 697
Psp124BI GAGCTC 1 cut(s) 666
PspN4I GGNNCC 1 cut(s) 716
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 1 cut(s) 864
PsuI RGATCY 2 cut(s) 714, 757
RsaI GTAC 2 cut(s) 582, 867
RsaNI GTAC 2 cut(s) 581, 866
RseI CAYNNNNRTG 1 cut(s) 428
SacI GAGCTC 1 cut(s) 666
SaqAI TTAA 2 cut(s) 525, 795
SatI GCNGC 3 cut(s) 162, 438, 696
Sau3AI GATC 8 cut(s) 15, 56, 223, 376, 700, 714, 757, 763
Sau96I GGNCC 1 cut(s) 4
SbfI CCTGCAGG 1 cut(s) 864
SdaI CCTGCAGG 1 cut(s) 864
SduI GDGCHC 1 cut(s) 666
SfaNI GCATC 5 cut(s) 226, 283, 376, 513, 741
SfcI CTRYAG 3 cut(s) 244, 733, 860
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 1 cut(s) 428
SmlI CTYRAG 2 cut(s) 296, 496
SmoI CTYRAG 2 cut(s) 296, 496
Sse8387I CCTGCAGG 1 cut(s) 864
Sse9I AATT 1 cut(s) 568
SsiI CCGC 3 cut(s) 10, 19, 624
SspI AATATT 1 cut(s) 449
SspMI CTAG 7 cut(s) 329, 512, 755, 767, 786, 806, 907
SstI GAGCTC 1 cut(s) 666
StyI CCWWGG 1 cut(s) 393
TaaI ACNGT 2 cut(s) 324, 580
TaiI ACGT 1 cut(s) 546
TaqII GACCGA 1 cut(s) 51
TasI AATT 1 cut(s) 568
TfiI GAWTC 1 cut(s) 782
Tru1I TTAA 2 cut(s) 525, 795
Tru9I TTAA 2 cut(s) 525, 795
TseFI GTSAC 2 cut(s) 574, 667
TseI GCWGC 3 cut(s) 161, 437, 695
Tsp45I GTSAC 2 cut(s) 574, 667
TspDTI ATGAA 3 cut(s) 98, 480, 531
VpaK11BI GGWCC 1 cut(s) 4
XagI CCTNNNNNAGG 1 cut(s) 765
XmiI GTMKAC 1 cut(s) 143
XspI CTAG 7 cut(s) 329, 512, 755, 767, 786, 806, 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.