AT5G23630

cation-transporting ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0008002
Physical Location & Seq
Reverse (-)
7960478 .. 7968197
7720 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G23630.1

Sequence Viewer

Length: 3540 bp
ATGTCGAGCTTTCGTGTGGGAGGAAAGGTAGTGGAGAAGGTTGATTTATGTAGGAAGAAACAATTGGTGTGGCGCTTGGACGTTTGGCCATTTGCGATTCTGTATACTGTATGGTTGACTACGATCGTTCCTAGCATAGACTTCAGTGATGCTTGCATTGCGCTTGGTGGTCTTTCTGCTTTCCACATCTTAGTCTTGCTTTTCACTACGTGGTCCGTGGATTTCAAGTGTTTTGTCCAGTTTAGCAAGGTTAACAGTATCGACCAGGCAGATGCATGTAAAGTTACACCAGCCAAATTTTCTGGTTCTAAAGAAGTTGTGCCTCTTCATTTTCGTAGCCAAATGACAGATTCAGCATCCTCGGGAGACATGGAAGAAATTTTCTTTGACTTCAGGAAGCAGCGTTTTATATACTCAAAAGAGTTAGGAGCCTTTTCCAAGCTTCCTTATCCCACAAAGGAAACATTTGGTCATTATTTGAAATGTACTGGTCATGGTACAGAAGCTAAAATTGCCACTGCCACTGAGAAGTGGGGAAGGAATGTATTTGATTATCCACAACCTACATTCCAGAAGCTAATGAAAGAAAACTGCATGGAACCCTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTTTGGTGCTTGGATGAATTCTGGTACTACAGTGTGTTCACACTATTCATGCTTTTCATGTTCGAGTCAACAATGGCAAAAAGCCGCTTGAAGACATTAACCGACCTAAGAAGTGTTAGGGTGGACAGTCAGACCGTGATGGTGTATCGATCCGGAAAGTGGGTGAAGCTCTTAGGTACAGATCTGCTTCCAGGAGATGTTGTGTCCATTGGGCGACCTTCAACTCAGACTGGAGGAGAGGATAAAACAGTACCAGCGGATATGCTTTTACTGGTAGGAAGTGCTATTGTAAATGAAGCCATTTTGACAGGCGAGTCAACTCCCCAATGGAAGGTTCCAATTGTTGGCCAAAGATCTGATGAAAAATTATCGATCAAAAGAAATAAGAATCATGTTTTATTTGGCGGGACCAAGATCTTGCAACATTCACCTGACAAGTCCTTCTCTCTGAAGACCCCTGATGGTGGCTGTCTAGCTGTTGTTCTCCGAACTGGATTTGAGACGAGCCAAGGAAAACTAATGAGGACAATTTTATTTTCTACAGAAAGGGTTACTGCAAACAGCTGGGAGAGTGGTCTGTTCATATTATTTCTTGTGGTATTTGCCGTGATAGCTGCAGGTTATGTTCTTGTAAAGGGTCTCGAGGATCCTACAAGGAGCAAATATAAGCTTTTGCTAGGCTGTTCACTTATCATCACCTCAGTGATCCCGCCCGAATTGCCTATGGAATTATCCATTGCTGTCAATACGTCATTACTTGCTCTTGTACGACGTGGGATATTTTGCACAGAGCCTTTTAGGATCCCTTTTGCGGGGAAGGTTGATTTGTGTTGTTTTGATAAGACTGGTACACTCACGTCAGATGACATGGAGTTCCGAGGAGTCGGGGGTTTGTCTAATTGTGAAGAAGCAGAGACTGATATGAGCAAGGTTCCTGTACGCACATTGGAAATTTTGGCTTCTTGTCATGCCTTGGTCTTTGTAGAAAACAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAAGGAATTGACTGGAGTTACAAAGCTGATGAAAAGGCCTTACCTAGAAGAGGAAATGGCAACTCAGTGCAGATTATGCAGAGATACCATTTTGCTTCGCATCTGAAGAGAATGTCTGTTATCGTTCGTATTCAGGAGGAATATTTGGCATTTGTGAAGGGTGCGCCAGAGACAATCCAAGAGAGGCTTGTGGATGTGCCTGCACAATATATCGAAACATATAAGAGATACACACGCCAAGGATCTCGGGTTCTAGCCCTTGCATATAAACGACTGCCTGATATGATGGTCAGTGAAGCTAGGGACATGGACAGGGATGCTGTTGAGAGTGATCTTACTTTTGCTGGGTTTGCGGTCTTCAACTGCCCCATTAGACCAGACTCAGCCCCCGTGCTCTTGGAGTTGAAGAATTCATCCCATGATTTGGTGATGATAACAGGTGATCAAGCTTTGACAGCTTGTCATGTTGCAGGCCAAGTGCATATTGTATCAAACCCAGTTTTAATTCTTGGACGATCAGGGAGTGGTAACGAATACAAGTGGGTGTCACCTGATGAGAAGGAGATCATCCCCTACAGTGAAAAAGAGATCGAAACCCTGGCAGAGACCCATGATTTATGCATTGGAGGTGACAGCATTGAAATGCTACAGGCTACATCTGCTGTTTTGCGAGTCATTCCGTTTGTTAAGGTTTTTGCGAGAGTTGCTCCACAGCAGAAGGAGCTGATCTTAACCACCTTCAAAGCGGTGGGCAGAGGTACTTTGATGTGTGGTGACGGGACAAATGATGTCGGAGCACTGAAGCAGGCCCATGTTGGAGTTGCCTTACTGAATAATAAACTTCCCTTGTCTCCATCGGATTCGTCTAAAGATGACAAGTCAAAGTCAAAAAAGTCCAAACTGCCATTAGAACCAGCAAGCAAAACCATAACTCAGAATGGGGAAGGATCATCAAAAGGAAAGATCCCACCCCAAAACCGCCACTTAACTGCTGCGGAACTGCAAAGACAAAAGTTGAAGAAGATTATGGATGACCTAAACAATGATGAAGGTGATGGCCGGTCAGCTCCCCTAGTTAAACTTGGGGATGCATCAATGGCATCCCCCTTCACAGCTAAACATGCGTCAGTTGCCCCAGTGACAGACATAATCCGGCAGGGTCGTAGCACACTTGTGACGACTCTTCAGATGTTCAAAATTCTCGGTCTGAACTGTCTCGCCACAGCATATGTCCTAAGTGTTATGTACTTAGACGGTGTAAAGCTTGGTGATGTCCAGGCTACAATCAGCGGAGTGTTAACAGCTGCGTTTTTCCTCTTCATTTCTCATGCCCGACCGCTTCAAACCCTCTCTGCAGAACGGCCCCACCCGAGTGTCTTCTCCGTGTACCTCTTCCTCTCTCTGATAGGACAGTTTGCTGTTCACTTGACCTTCTTGGTCTACTCTGTGAAGGAAGCTGAGAAACACATGCCCGAGGAATGCATCGAACCAGACGCAAGTTTCCATCCTAACCTGGTGAACACAGTGTCGTACATGGTGAGCATGATGCTTCAGGTTGCTACATTTGCTGTGAACTACATGGGACATCCCTTTAACCAGAGTATCAGAGAAAACAAACCGTTCTTCTACGCACTCATTGCTGGAGCAGGGTTCTTCACCGTCATCGCCTCTGATCTCTTCAGAGACCTGAACGATTCGCTGAAGCTAGTTCCATTACCTCAAGGTCTGAGAGATAAGCTTCTCATCTGGGCATCACTTATGTTCATCATCTGCTACTCATGGGAGCGGTTACTCAGGTGGGCTTTCCCTGGTAAGATTTCTTCTTGGAAACATAAGCAAAGAGCTGTCACTGCAAATCTGGAGAAGAAGAAGAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001709 GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008324 GO:0009267 GO:0009555 GO:0009605 GO:0009846 GO:0009856 GO:0009888 GO:0009987 GO:0009991 GO:0010073 GO:0010152 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016036 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0019829 GO:0021700 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030154 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0034220 GO:0042592 GO:0042594 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044706 GO:0045165 GO:0046873 GO:0048229 GO:0048507 GO:0048856 GO:0048863 GO:0048865 GO:0048867 GO:0048869 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071496 GO:0071944 GO:0072503 GO:0072507 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0099131 GO:0099132
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cation_ATPase E1-E2_ATPase Hydrolase

Protein Analysis

1179

Amino Acids

131.11

Weight (kDa)

8.76

Isoelectric Point (pI)

40.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2TM_P5A-ATPase PF23143 20 - 85 3.9e-20 P5A-ATPase, transmembrane helical hairpin
E1-E2_ATPase PF00122 254 - 387 5e-13 P-type ATPase actuator domain
Cation_ATPase PF13246 542 - 679 2.5e-12 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 946
Acc36I ACCTGC 1 cut(s) 1241
AccB7I CCANNNNNTGG 2 cut(s) 977, 2083
AccBSI CCGCTC 1 cut(s) 3445
AccI GTMKAC 2 cut(s) 104, 3099
AccIII TCCGGA 1 cut(s) 785
AcoI YGGCCR 3 cut(s) 86, 979, 2716
AcsI RAATTY 6 cut(s) 296, 378, 650, 1584, 2068, 2856
AcuI CTGAAG 9 cut(s) 127, 376, 1103, 1784, 2480, 2828, 3194, 3322, 3380
AdeI CACNNNGTG 1 cut(s) 210
AfiI CCNNNNNNNGG 8 cut(s) 792, 964, 977, 1097, 1444, 1445, 1709, 2083
AhdI GACNNNNNGTC 1 cut(s) 2118
AjiI CACGTC 2 cut(s) 1406, 1491
AjnI CCWGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
AjuI GAANNNNNNNTTGG 4 cut(s) 47, 79, 951, 983
AleI CACNNNNGTG 3 cut(s) 1334, 2831, 3030
AloI GAACNNNNNNTCC 2 cut(s) 1893, 1925
Alw21I GWGCWC 2 cut(s) 2055, 2458
Alw26I GTCTC 9 cut(s) 360, 1127, 1277, 1541, 1823, 2258, 2514, 2879, 3336
AlwNI CAGNNNCTG 1 cut(s) 1550
Ama87I CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
Aor13HI TCCGGA 1 cut(s) 785
AoxI GGCC 7 cut(s) 86, 979, 1695, 2131, 2466, 2716, 3020
ApeKI GCWGC 5 cut(s) 400, 1247, 1652, 2651, 2963
ApoI RAATTY 6 cut(s) 296, 378, 650, 1584, 2068, 2856
AspLEI GCGC 3 cut(s) 75, 163, 1825
AspS9I GGNCC 4 cut(s) 213, 1041, 2467, 3021
AvaI CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
AvaII GGWCC 2 cut(s) 213, 1041
BaeI ACNNNNGTAYC 4 cut(s) 649, 682, 3244, 3277
BalI TGGCCA 2 cut(s) 88, 981
BamHI GGATCC 2 cut(s) 1279, 1434
BarI GAAGNNNNNNTAC 2 cut(s) 3463, 3495
BbsI GAAGAC 4 cut(s) 731, 1091, 2008, 3028
Bbv12I GWGCWC 2 cut(s) 2055, 2458
BbvI GCAGC 5 cut(s) 412, 1234, 1639, 2638, 2950
BccI CCATC 6 cut(s) 766, 1088, 1939, 2521, 2708, 3171
BceAI ACGGC 2 cut(s) 1223, 3035
BciT130I CCWGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
BclI TGATCA 1 cut(s) 2101
BcoDI GTCTC 9 cut(s) 360, 1127, 1277, 1541, 1823, 2258, 2514, 2879, 3336
BfaI CTAG 8 cut(s) 132, 1106, 1310, 1704, 1913, 1959, 2732, 3365
BfmI CTRYAG 6 cut(s) 661, 1173, 1248, 2233, 2306, 3012
BfoI RGCGCY 1 cut(s) 76
BfuAI ACCTGC 1 cut(s) 1241
BglII AGATCT 3 cut(s) 814, 986, 1047
BisI GCNGC 6 cut(s) 401, 718, 1248, 1653, 2652, 2964
BlsI GCNGC 6 cut(s) 402, 719, 1249, 1654, 2653, 2965
Bme1390I CCNGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
Bme18I GGWCC 2 cut(s) 213, 1041
BmeRI GACNNNNNGTC 1 cut(s) 2118
BmeT110I CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
BmgBI CACGTC 2 cut(s) 1406, 1491
BmgT120I GGNCC 4 cut(s) 213, 1041, 2467, 3021
BmiI GGNNCC 8 cut(s) 430, 600, 969, 1042, 1281, 1436, 1566, 3023
BmrFI CCNGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
BmrI ACTGGG 2 cut(s) 2150, 2789
BmuI ACTGGG 2 cut(s) 2150, 2789
BpiI GAAGAC 4 cut(s) 731, 1091, 2008, 3028
BplI GAGNNNNNCTC 2 cut(s) 2350, 2382
BpmI CTGGAG 4 cut(s) 885, 1693, 3321, 3539
BpuEI CTTGAG 2 cut(s) 1664, 3363
Bsa29I ATCGAT 2 cut(s) 781, 1004
BsaAI YACGTR 1 cut(s) 210
BsaI GGTCTC 3 cut(s) 1277, 2258, 3336
BsaJI CCNNGG 9 cut(s) 216, 360, 1141, 1510, 1605, 1897, 2256, 3132, 3466
BsaWI WCCGGW 1 cut(s) 785
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 819, 849
Bsc4I CCNNNNNNNGG 8 cut(s) 792, 964, 977, 1097, 1444, 1445, 1709, 2083
Bse118I RCCGGY 1 cut(s) 2718
Bse1I ACTGG 9 cut(s) 238, 493, 868, 909, 1129, 1483, 1676, 2156, 2795
Bse3DI GCAATG 3 cut(s) 156, 1368, 3294
BseAI TCCGGA 1 cut(s) 785
BseBI CCWGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
BseCI ATCGAT 2 cut(s) 781, 1004
BseDI CCNNGG 9 cut(s) 216, 360, 1141, 1510, 1605, 1897, 2256, 3132, 3466
BseLI CCNNNNNNNGG 8 cut(s) 792, 964, 977, 1097, 1444, 1445, 1709, 2083
BseMI GCAATG 3 cut(s) 156, 1368, 3294
BseMII CTCAG 9 cut(s) 516, 872, 1347, 1737, 2055, 2606, 3108, 3377, 3466
BseNI ACTGG 9 cut(s) 238, 493, 868, 909, 1129, 1483, 1676, 2156, 2795
BseRI GAGGAG 2 cut(s) 882, 1527
BseXI GCAGC 5 cut(s) 412, 1234, 1639, 2638, 2950
BseYI CCCAGC 2 cut(s) 1197, 2003
BsgI GTGCAG 3 cut(s) 1638, 1748, 1845
Bsh1285I CGRYCG 2 cut(s) 126, 2996
BshFI GGCC 7 cut(s) 88, 981, 1697, 2133, 2468, 2718, 3022
BshVI ATCGAT 2 cut(s) 781, 1004
BsiEI CGRYCG 2 cut(s) 126, 2996
BsiHKAI GWGCWC 2 cut(s) 2055, 2458
BsiHKCI CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
BsiSI CCGG 3 cut(s) 786, 2719, 2812
BslFI GGGAC 4 cut(s) 1054, 1976, 2452, 3255
BslI CCNNNNNNNGG 8 cut(s) 792, 964, 977, 1097, 1444, 1445, 1709, 2083
BsmAI GTCTC 9 cut(s) 360, 1127, 1277, 1541, 1823, 2258, 2514, 2879, 3336
BsmBI CGTCTC 1 cut(s) 1127
BsmFI GGGAC 4 cut(s) 1054, 1976, 2452, 3255
BsmI GAATGC 1 cut(s) 3143
BsnI GGCC 7 cut(s) 88, 981, 1697, 2133, 2468, 2718, 3022
Bso31I GGTCTC 3 cut(s) 1277, 2258, 3336
BsoBI CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
Bsp1286I GDGCHC 2 cut(s) 2055, 2458
Bsp13I TCCGGA 1 cut(s) 785
BspANI GGCC 7 cut(s) 88, 981, 1697, 2133, 2468, 2718, 3022
BspCNI CTCAG 9 cut(s) 517, 871, 1346, 1736, 2054, 2605, 3109, 3378, 3465
BspDI ATCGAT 2 cut(s) 781, 1004
BspEI TCCGGA 1 cut(s) 785
BspLI GGNNCC 8 cut(s) 430, 600, 969, 1042, 1281, 1436, 1566, 3023
BspMAI CTGCAG 2 cut(s) 1252, 3016
BspMI ACCTGC 1 cut(s) 1241
BspTNI GGTCTC 3 cut(s) 1277, 2258, 3336
BsrBI CCGCTC 1 cut(s) 3445
BsrDI GCAATG 3 cut(s) 156, 1368, 3294
BsrFI RCCGGY 1 cut(s) 2718
BsrI ACTGG 9 cut(s) 238, 493, 868, 909, 1129, 1483, 1676, 2156, 2795
BssAI RCCGGY 1 cut(s) 2718
BssECI CCNNGG 9 cut(s) 216, 360, 1141, 1510, 1605, 1897, 2256, 3132, 3466
BssNAI GTATAC 1 cut(s) 105
BssT1I CCWWGG 3 cut(s) 1141, 1605, 1897
Bst1107I GTATAC 1 cut(s) 105
Bst2UI CCWGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
Bst6I CTCTTC 7 cut(s) 330, 1702, 1760, 2847, 2981, 3056, 3341
BstAPI GCANNNNNTGC 2 cut(s) 1735, 3296
BstBAI YACGTR 1 cut(s) 210
BstC8I GCNNGC 5 cut(s) 154, 1860, 2131, 2466, 2578
BstDSI CCRYGG 1 cut(s) 216
BstENI CCTNNNNNAGG 1 cut(s) 1707
BstH2I RGCGCY 1 cut(s) 76
BstHHI GCGC 3 cut(s) 75, 163, 1825
BstMAI GTCTC 9 cut(s) 360, 1127, 1277, 1541, 1823, 2258, 2514, 2879, 3336
BstMCI CGRYCG 2 cut(s) 126, 2996
BstNI CCWGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
BstNSI RCATGY 3 cut(s) 279, 2783, 3130
BstSCI CCNGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
BstSFI CTRYAG 6 cut(s) 661, 1173, 1248, 2233, 2306, 3012
BstV1I GCAGC 5 cut(s) 412, 1234, 1639, 2638, 2950
BstV2I GAAGAC 4 cut(s) 731, 1091, 2008, 3028
BstX2I RGATCY 7 cut(s) 814, 986, 1047, 1279, 1434, 1901, 2622
BstYI RGATCY 7 cut(s) 814, 986, 1047, 1279, 1434, 1901, 2622
BstZ17I GTATAC 1 cut(s) 105
Bsu15I ATCGAT 2 cut(s) 781, 1004
BsuRI GGCC 7 cut(s) 88, 981, 1697, 2133, 2468, 2718, 3022
BsuTUI ATCGAT 2 cut(s) 781, 1004
BtgI CCRYGG 1 cut(s) 216
BtgZI GCGATG 1 cut(s) 3307
BtrI CACGTC 2 cut(s) 1406, 1491
BtsI GCAGTG 2 cut(s) 516, 3507
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 5 cut(s) 154, 1860, 2131, 2466, 2578
CaiI CAGNNNCTG 1 cut(s) 1550
CfoI GCGC 3 cut(s) 75, 163, 1825
Cfr10I RCCGGY 1 cut(s) 2718
Cfr13I GGNCC 4 cut(s) 213, 1041, 2467, 3021
ClaI ATCGAT 2 cut(s) 781, 1004
CseI GACGC 2 cut(s) 2772, 3161
CsiI ACCWGGT 1 cut(s) 3171
CspCI CAANNNNNGTGG 2 cut(s) 50, 85
DraIII CACNNNGTG 1 cut(s) 210
DrdI GACNNNNNNGTC 1 cut(s) 946
DriI GACNNNNNGTC 1 cut(s) 2118
DseDI GACNNNNNNGTC 1 cut(s) 946
EaeI YGGCCR 3 cut(s) 86, 979, 2716
Eam1104I CTCTTC 7 cut(s) 330, 1702, 1760, 2847, 2981, 3056, 3341
Eam1105I GACNNNNNGTC 1 cut(s) 2118
EarI CTCTTC 7 cut(s) 330, 1702, 1760, 2847, 2981, 3056, 3341
Eco130I CCWWGG 3 cut(s) 1141, 1605, 1897
Eco147I AGGCCT 1 cut(s) 1697
Eco31I GGTCTC 3 cut(s) 1277, 2258, 3336
Eco47I GGWCC 2 cut(s) 213, 1041
Eco57I CTGAAG 9 cut(s) 127, 376, 1103, 1784, 2480, 2828, 3194, 3322, 3380
Eco88I CYCGRG 5 cut(s) 361, 1274, 1905, 3028, 3131
EcoNI CCTNNNNNAGG 1 cut(s) 1707
EcoRI GAATTC 2 cut(s) 650, 2068
EcoRII CCWGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
EcoT14I CCWWGG 3 cut(s) 1141, 1605, 1897
EcoT22I ATGCAT 4 cut(s) 277, 2282, 2752, 3143
ErhI CCWWGG 3 cut(s) 1141, 1605, 1897
Esp3I CGTCTC 1 cut(s) 1127
FalI AAGNNNNNCTT 2 cut(s) 1830, 1862
FaqI GGGAC 4 cut(s) 1054, 1976, 2452, 3255
FauI CCCGC 3 cut(s) 1031, 1350, 1438
FauNDI CATATG 1 cut(s) 2887
FbaI TGATCA 1 cut(s) 2101
FblI GTMKAC 2 cut(s) 104, 3099
Fnu4HI GCNGC 6 cut(s) 401, 718, 1248, 1653, 2652, 2964
Fsp4HI GCNGC 6 cut(s) 401, 718, 1248, 1653, 2652, 2964
FspBI CTAG 8 cut(s) 132, 1106, 1310, 1704, 1913, 1959, 2732, 3365
GlaI GCGC 3 cut(s) 74, 162, 1824
GluI GCNGC 6 cut(s) 401, 718, 1248, 1653, 2652, 2964
GsaI CCCAGC 2 cut(s) 1201, 2007
GsuI CTGGAG 4 cut(s) 885, 1693, 3321, 3539
HaeII RGCGCY 1 cut(s) 76
HaeIII GGCC 7 cut(s) 88, 981, 1697, 2133, 2468, 2718, 3022
HapII CCGG 3 cut(s) 786, 2719, 2812
HgaI GACGC 2 cut(s) 2772, 3161
HhaI GCGC 3 cut(s) 75, 163, 1825
Hin6I GCGC 3 cut(s) 73, 161, 1823
HinP1I GCGC 3 cut(s) 73, 161, 1823
HincII GTYRAC 5 cut(s) 117, 253, 702, 951, 2958
HindII GTYRAC 5 cut(s) 117, 253, 702, 951, 2958
HindIII AAGCTT 5 cut(s) 440, 1301, 2106, 2921, 3395
HpaI GTTAAC 2 cut(s) 253, 2958
HpaII CCGG 3 cut(s) 786, 2719, 2812
Hpy188III TCNNGA 8 cut(s) 363, 394, 571, 786, 1274, 1643, 1793, 3518
Hpy99I CGWCG 1 cut(s) 1407
HpyCH4IV ACGT 5 cut(s) 81, 209, 1382, 1405, 1490
HpySE526I ACGT 5 cut(s) 81, 209, 1382, 1405, 1490
HspAI GCGC 3 cut(s) 73, 161, 1823
Kpn2I TCCGGA 1 cut(s) 785
Ksp22I TGATCA 1 cut(s) 2101
KspAI GTTAAC 2 cut(s) 253, 2958
LmnI GCTCC 8 cut(s) 428, 1290, 2371, 2380, 2453, 2731, 3302, 3442
Lsp1109I GCAGC 5 cut(s) 412, 1234, 1639, 2638, 2950
MabI ACCWGGT 1 cut(s) 3171
MaeI CTAG 8 cut(s) 132, 1106, 1310, 1704, 1913, 1959, 2732, 3365
MaeII ACGT 5 cut(s) 81, 209, 1382, 1405, 1490
MbiI CCGCTC 1 cut(s) 3445
MfeI CAATTG 2 cut(s) 62, 972
MflI RGATCY 7 cut(s) 814, 986, 1047, 1279, 1434, 1901, 2622
MhlI GDGCHC 2 cut(s) 2055, 2458
MlsI TGGCCA 2 cut(s) 88, 981
MluNI TGGCCA 2 cut(s) 88, 981
MlyI GAGTC 6 cut(s) 707, 956, 1524, 2033, 2340, 2833
MmeI TCCRAC 2 cut(s) 2431, 2455
Mox20I TGGCCA 2 cut(s) 88, 981
Mph1103I ATGCAT 4 cut(s) 277, 2282, 2752, 3143
MroI TCCGGA 1 cut(s) 785
MscI TGGCCA 2 cut(s) 88, 981
MslI CAYNNNNRTG 4 cut(s) 1334, 2300, 2831, 3030
Msp20I TGGCCA 2 cut(s) 88, 981
MspA1I CMGCKG 4 cut(s) 890, 1197, 2949, 2963
MspI CCGG 3 cut(s) 786, 2719, 2812
MspR9I CCNGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
MunI CAATTG 2 cut(s) 62, 972
Mva1269I GAATGC 1 cut(s) 3143
MvaI CCWGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
NdeI CATATG 1 cut(s) 2887
NlaIV GGNNCC 8 cut(s) 430, 600, 969, 1042, 1281, 1436, 1566, 3023
NmuCI GTSAC 6 cut(s) 2205, 2288, 2432, 2797, 2833, 3505
NsiI ATGCAT 4 cut(s) 277, 2282, 2752, 3143
NspI RCATGY 3 cut(s) 279, 2783, 3130
OliI CACNNNNGTG 3 cut(s) 1334, 2831, 3030
PaeR7I CTCGAG 1 cut(s) 1274
PceI AGGCCT 1 cut(s) 1697
PctI GAATGC 1 cut(s) 3143
PfeI GAWTC 5 cut(s) 97, 350, 1021, 2519, 3353
PflMI CCANNNNNTGG 2 cut(s) 977, 2083
PfoI TCCNGGA 1 cut(s) 823
PkrI GCNGC 6 cut(s) 402, 719, 1249, 1654, 2653, 2965
Ple19I CGATCG 1 cut(s) 126
PleI GAGTC 6 cut(s) 706, 955, 1523, 2033, 2339, 2833
PpsI GAGTC 6 cut(s) 706, 955, 1523, 2033, 2339, 2833
Ppu21I YACGTR 1 cut(s) 210
Psp6I CCWGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
PspFI CCCAGC 2 cut(s) 1197, 2003
PspGI CCWGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
PspN4I GGNNCC 8 cut(s) 430, 600, 969, 1042, 1281, 1436, 1566, 3023
PspPI GGNCC 4 cut(s) 213, 1041, 2467, 3021
PstI CTGCAG 2 cut(s) 1252, 3016
PstNI CAGNNNCTG 1 cut(s) 1550
PsuI RGATCY 7 cut(s) 814, 986, 1047, 1279, 1434, 1901, 2622
PvuI CGATCG 1 cut(s) 126
PvuII CAGCTG 2 cut(s) 1197, 2963
RseI CAYNNNNRTG 4 cut(s) 1334, 2300, 2831, 3030
SatI GCNGC 6 cut(s) 401, 718, 1248, 1653, 2652, 2964
Sau96I GGNCC 4 cut(s) 213, 1041, 2467, 3021
SchI GAGTC 6 cut(s) 707, 956, 1524, 2033, 2340, 2833
ScrFI CCNGG 6 cut(s) 266, 825, 2258, 2936, 3173, 3468
SduI GDGCHC 2 cut(s) 2055, 2458
SexAI ACCWGGT 1 cut(s) 3171
SfcI CTRYAG 6 cut(s) 661, 1173, 1248, 2233, 2306, 3012
Sfr274I CTCGAG 1 cut(s) 1274
SinI GGWCC 2 cut(s) 213, 1041
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 4 cut(s) 1334, 2300, 2831, 3030
SmlI CTYRAG 3 cut(s) 1274, 1643, 3378
SmoI CTYRAG 3 cut(s) 1274, 1643, 3378
SseBI AGGCCT 1 cut(s) 1697
SspI AATATT 1 cut(s) 1802
SspMI CTAG 8 cut(s) 132, 1106, 1310, 1704, 1913, 1959, 2732, 3365
StuI AGGCCT 1 cut(s) 1697
StyD4I CCNGG 6 cut(s) 264, 823, 2256, 2934, 3171, 3466
StyI CCWWGG 3 cut(s) 1141, 1605, 1897
TaiI ACGT 5 cut(s) 84, 212, 1385, 1408, 1493
TaqI TCGA 9 cut(s) 5, 261, 696, 781, 1004, 1275, 1872, 2250, 3144
TaqII GACCGA 1 cut(s) 2852
TatI WGTACW 2 cut(s) 485, 2904
TauI GCSGC 1 cut(s) 720
TfiI GAWTC 5 cut(s) 97, 350, 1021, 2519, 3353
TseFI GTSAC 6 cut(s) 2205, 2288, 2432, 2797, 2833, 3505
TseI GCWGC 5 cut(s) 400, 1247, 1652, 2651, 2963
Tsp45I GTSAC 6 cut(s) 2205, 2288, 2432, 2797, 2833, 3505
TspGWI ACGGA 3 cut(s) 205, 2328, 3031
Van91I CCANNNNNTGG 2 cut(s) 977, 2083
VpaK11BI GGWCC 2 cut(s) 213, 1041
XagI CCTNNNNNAGG 1 cut(s) 1707
XapI RAATTY 6 cut(s) 296, 378, 650, 1584, 2068, 2856
XceI RCATGY 3 cut(s) 279, 2783, 3130
XhoI CTCGAG 1 cut(s) 1274
XmiI GTMKAC 2 cut(s) 104, 3099
XspI CTAG 8 cut(s) 132, 1106, 1310, 1704, 1913, 1959, 2732, 3365
Zsp2I ATGCAT 4 cut(s) 277, 2282, 2752, 3143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.