cation-transporting ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23630 |
| fragaria_vesca | FvH4_5g30560 FvH4_5g30560 FvH4_5g30560 FvH4_5g30560 |
| malus_domestica | MD08G1222500.v1.1 MD15G1415900.v1.1 |
| prunus_persica | Prupe.1G560300_v2.0.a1 Prupe.1G560300_v2.0.a1 |
| pyrus_communis | pycom08g19340 pycom15g36910 |
| rosa_chinensis | RchiOBHm_Chr7g0225451 |
| rosa_laevigata | RLG00000001818 RLG00000001819 |
| rosa_multiflora | Rmu_co8033688.1_g000001 Rmu_sc0000259.1_g000014 Rmu_sc0000259.1_g000015 |
| rosa_roxburghii | Rroxscaffold_3G00233810 |
| rosa_rugosa | Rorug07G0229400 |
| rosa_samantha | Rh7AG373800 Rh7BG364200 Rh7CG392100 Rh7DG375400 |
| rosa_wichuraiana | Rw7G031670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3482 |
| Acc65I | GGTACC | 1 cut(s) | 1852 |
| AccB1I | GGYRCC | 5 cut(s) | 167, 1817, 1852, 2494, 3412 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1603 |
| AccI | GTMKAC | 3 cut(s) | 147, 947, 1840 |
| AccII | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| AccIII | TCCGGA | 1 cut(s) | 1428 |
| AciI | CCGC | 7 cut(s) | 153, 2009, 2042, 2492, 2560, 2594, 2652 |
| AclI | AACGTT | 1 cut(s) | 403 |
| AclWI | GGATC | 5 cut(s) | 1271, 1284, 1628, 2061, 2074 |
| AcoI | YGGCCR | 2 cut(s) | 490, 3261 |
| AdeI | CACNNNGTG | 1 cut(s) | 1403 |
| AfaI | GTAC | 9 cut(s) | 237, 487, 1156, 1257, 1295, 1534, 1854, 2872, 3236 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 457, 499, 961, 1094, 1442, 1603, 1706 |
| AflIII | ACRYGT | 2 cut(s) | 745, 3076 |
| AhlI | ACTAGT | 2 cut(s) | 1526, 3557 |
| AjiI | CACGTC | 1 cut(s) | 746 |
| AjnI | CCWGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 47, 79, 449, 481 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1702, 1734 |
| Alw26I | GTCTC | 8 cut(s) | 1732, 1787, 1865, 1905, 1976, 2629, 2719, 2924 |
| AlwI | GGATC | 5 cut(s) | 1271, 1284, 1628, 2061, 2074 |
| Aor13HI | TCCGGA | 1 cut(s) | 1428 |
| ApaI | GGGCCC | 1 cut(s) | 3457 |
| AseI | ATTAAT | 2 cut(s) | 578, 2159 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 930, 1830 |
| Asp718I | GGTACC | 1 cut(s) | 1852 |
| AspLEI | GCGC | 7 cut(s) | 75, 1572, 1574, 1654, 3037, 3039, 3540 |
| AspS9I | GGNCC | 9 cut(s) | 213, 631, 857, 1671, 1912, 2168, 2464, 3453, 3454 |
| AsuNHI | GCTAGC | 1 cut(s) | 2654 |
| AvaII | GGWCC | 4 cut(s) | 213, 857, 1671, 2168 |
| BaeGI | GKGCMC | 4 cut(s) | 172, 1822, 3417, 3457 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1836, 1869 |
| BalI | TGGCCA | 2 cut(s) | 492, 3263 |
| BamHI | GGATCC | 2 cut(s) | 1276, 2066 |
| BanI | GGYRCC | 5 cut(s) | 167, 1817, 1852, 2494, 3412 |
| BanII | GRGCYC | 2 cut(s) | 603, 3457 |
| BauI | CACGAG | 1 cut(s) | 263 |
| BbsI | GAAGAC | 1 cut(s) | 604 |
| BbvCI | CCTCAGC | 1 cut(s) | 2217 |
| BccI | CCATC | 7 cut(s) | 1085, 1864, 2426, 2651, 2753, 2951, 3344 |
| BceAI | ACGGC | 4 cut(s) | 1386, 2717, 2943, 3560 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1631, 1665 |
| BciT130I | CCWGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| BcoDI | GTCTC | 8 cut(s) | 1732, 1787, 1865, 1905, 1976, 2629, 2719, 2924 |
| BcuI | ACTAGT | 2 cut(s) | 1526, 3557 |
| BfaI | CTAG | 8 cut(s) | 132, 1284, 1527, 2355, 2655, 2711, 2906, 3558 |
| BfmI | CTRYAG | 2 cut(s) | 1170, 1365 |
| BfoI | RGCGCY | 2 cut(s) | 76, 3541 |
| BfuAI | ACCTGC | 1 cut(s) | 3482 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2801, 3341 |
| BlpI | GCTNAGC | 1 cut(s) | 2767 |
| BmcAI | AGTACT | 2 cut(s) | 487, 2872 |
| Bme1390I | CCNGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| Bme18I | GGWCC | 4 cut(s) | 213, 857, 1671, 2168 |
| BmgBI | CACGTC | 1 cut(s) | 746 |
| BmgT120I | GGNCC | 9 cut(s) | 213, 631, 857, 1671, 1912, 2168, 2464, 3453, 3454 |
| BmrFI | CCNGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| BmrI | ACTGGG | 3 cut(s) | 949, 1131, 1995 |
| BmtI | GCTAGC | 1 cut(s) | 2658 |
| BmuI | ACTGGG | 3 cut(s) | 949, 1131, 1995 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1897 |
| BpiI | GAAGAC | 1 cut(s) | 604 |
| BpmI | CTGGAG | 3 cut(s) | 2757, 2873, 3239 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1344, 2217, 2367, 3404 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2767 |
| BpuEI | CTTGAG | 1 cut(s) | 1292 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3207 |
| BsaI | GGTCTC | 1 cut(s) | 1905 |
| BsaWI | WCCGGW | 4 cut(s) | 302, 1428, 1475, 3193 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 12, 42 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 457, 499, 961, 1094, 1442, 1603, 1706 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3207 |
| BseAI | TCCGGA | 1 cut(s) | 1428 |
| BseBI | CCWGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| BseJI | GATNNNNATC | 1 cut(s) | 3207 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 457, 499, 961, 1094, 1442, 1603, 1706 |
| BsePI | GCGCGC | 2 cut(s) | 1570, 3035 |
| BseRI | GAGGAG | 1 cut(s) | 1004 |
| BseSI | GKGCMC | 4 cut(s) | 172, 1822, 3417, 3457 |
| BseYI | CCCAGC | 1 cut(s) | 1194 |
| BsgI | GTGCAG | 1 cut(s) | 2999 |
| Bsh1236I | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| BshNI | GGYRCC | 5 cut(s) | 167, 1817, 1852, 2494, 3412 |
| BsiSI | CCGG | 4 cut(s) | 303, 1429, 1476, 3194 |
| BslFI | GGGAC | 6 cut(s) | 549, 1051, 2192, 3401, 3441, 3506 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 457, 499, 961, 1094, 1442, 1603, 1706 |
| BsmAI | GTCTC | 8 cut(s) | 1732, 1787, 1865, 1905, 1976, 2629, 2719, 2924 |
| BsmFI | GGGAC | 6 cut(s) | 549, 1051, 2192, 3401, 3441, 3506 |
| BsmI | GAATGC | 1 cut(s) | 2494 |
| Bso31I | GGTCTC | 1 cut(s) | 1905 |
| Bsp120I | GGGCCC | 1 cut(s) | 3453 |
| Bsp1286I | GDGCHC | 5 cut(s) | 172, 603, 1822, 3417, 3457 |
| Bsp13I | TCCGGA | 1 cut(s) | 1428 |
| Bsp1407I | TGTACA | 1 cut(s) | 235 |
| Bsp143I | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2767 |
| Bsp19I | CCATGG | 2 cut(s) | 493, 2799 |
| BspACI | CCGC | 7 cut(s) | 153, 2009, 2042, 2492, 2560, 2594, 2652 |
| BspEI | TCCGGA | 1 cut(s) | 1428 |
| BspFNI | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| BspHI | TCATGA | 1 cut(s) | 2266 |
| BspMI | ACCTGC | 1 cut(s) | 3482 |
| BspOI | GCTAGC | 1 cut(s) | 2658 |
| BspPI | GGATC | 5 cut(s) | 1271, 1284, 1628, 2061, 2074 |
| BspQI | GCTCTTC | 2 cut(s) | 53, 186 |
| BspT107I | GGYRCC | 5 cut(s) | 167, 1817, 1852, 2494, 3412 |
| BspTNI | GGTCTC | 1 cut(s) | 1905 |
| BsrGI | TGTACA | 1 cut(s) | 235 |
| BssHII | GCGCGC | 2 cut(s) | 1570, 3035 |
| BssMI | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| BssSI | CACGAG | 1 cut(s) | 263 |
| BssT1I | CCWWGG | 4 cut(s) | 246, 456, 493, 2799 |
| Bst2BI | CACGAG | 1 cut(s) | 263 |
| Bst2UI | CCWGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| Bst6I | CTCTTC | 7 cut(s) | 53, 186, 369, 1785, 2632, 2745, 3048 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2588, 2825, 2834 |
| BstAUI | TGTACA | 1 cut(s) | 235 |
| BstDSI | CCRYGG | 6 cut(s) | 216, 493, 1402, 2799, 2844, 2925 |
| BstEII | GGTNACC | 2 cut(s) | 2096, 2669 |
| BstFNI | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| BstH2I | RGCGCY | 2 cut(s) | 76, 3541 |
| BstHHI | GCGC | 7 cut(s) | 75, 1572, 1574, 1654, 3037, 3039, 3540 |
| BstKTI | GATC | 8 cut(s) | 817, 851, 1279, 1636, 2069, 2272, 2385, 3379 |
| BstMAI | GTCTC | 8 cut(s) | 1732, 1787, 1865, 1905, 1976, 2629, 2719, 2924 |
| BstMBI | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| BstNI | CCWGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| BstNSI | RCATGY | 7 cut(s) | 279, 895, 2828, 3035, 3080, 3175, 3551 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1897 |
| BstPI | GGTNACC | 2 cut(s) | 2096, 2669 |
| BstSCI | CCNGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| BstSFI | CTRYAG | 2 cut(s) | 1170, 1365 |
| BstSLI | GKGCMC | 4 cut(s) | 172, 1822, 3417, 3457 |
| BstUI | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| BstV2I | GAAGAC | 1 cut(s) | 604 |
| BstX2I | RGATCY | 2 cut(s) | 1276, 2066 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1963, 2666 |
| BstYI | RGATCY | 2 cut(s) | 1276, 2066 |
| BtgI | CCRYGG | 6 cut(s) | 216, 493, 1402, 2799, 2844, 2925 |
| BtgZI | GCGATG | 2 cut(s) | 2629, 2988 |
| BtrI | CACGTC | 1 cut(s) | 746 |
| BtsI | GCAGTG | 1 cut(s) | 1242 |
| BtsIMutI | CAGTG | 8 cut(s) | 369, 962, 1242, 2188, 2239, 2409, 2998, 3429 |
| BveI | ACCTGC | 1 cut(s) | 3482 |
| CciI | TCATGA | 1 cut(s) | 2266 |
| CfoI | GCGC | 7 cut(s) | 75, 1572, 1574, 1654, 3037, 3039, 3540 |
| Cfr13I | GGNCC | 9 cut(s) | 213, 631, 857, 1671, 1912, 2168, 2464, 3453, 3454 |
| CseI | GACGC | 1 cut(s) | 281 |
| Csp6I | GTAC | 9 cut(s) | 236, 486, 1155, 1256, 1294, 1533, 1853, 2871, 3235 |
| CviQI | GTAC | 9 cut(s) | 236, 486, 1155, 1256, 1294, 1533, 1853, 2871, 3235 |
| DpnI | GATC | 8 cut(s) | 816, 850, 1278, 1635, 2068, 2271, 2384, 3378 |
| DpnII | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| DraI | TTTAAA | 3 cut(s) | 480, 1678, 2899 |
| DraIII | CACNNNGTG | 1 cut(s) | 1403 |
| EaeI | YGGCCR | 2 cut(s) | 490, 3261 |
| Eam1104I | CTCTTC | 7 cut(s) | 53, 186, 369, 1785, 2632, 2745, 3048 |
| EarI | CTCTTC | 7 cut(s) | 53, 186, 369, 1785, 2632, 2745, 3048 |
| Eco130I | CCWWGG | 4 cut(s) | 246, 456, 493, 2799 |
| Eco147I | AGGCCT | 2 cut(s) | 2910, 3067 |
| Eco24I | GRGCYC | 2 cut(s) | 603, 3457 |
| Eco31I | GGTCTC | 1 cut(s) | 1905 |
| Eco32I | GATATC | 1 cut(s) | 2202 |
| Eco47I | GGWCC | 4 cut(s) | 213, 857, 1671, 2168 |
| Eco91I | GGTNACC | 2 cut(s) | 2096, 2669 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3454 |
| EcoO65I | GGTNACC | 2 cut(s) | 2096, 2669 |
| EcoRII | CCWGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| EcoRV | GATATC | 1 cut(s) | 2202 |
| EcoT14I | CCWWGG | 4 cut(s) | 246, 456, 493, 2799 |
| EcoT22I | ATGCAT | 1 cut(s) | 2830 |
| EcoT38I | GRGCYC | 2 cut(s) | 603, 3457 |
| ErhI | CCWWGG | 4 cut(s) | 246, 456, 493, 2799 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 47, 79, 416, 448, 3311, 3343 |
| FaqI | GGGAC | 6 cut(s) | 549, 1051, 2192, 3401, 3441, 3506 |
| FauI | CCCGC | 1 cut(s) | 2587 |
| FauNDI | CATATG | 2 cut(s) | 2338, 2932 |
| FblI | GTMKAC | 3 cut(s) | 147, 947, 1840 |
| FriOI | GRGCYC | 2 cut(s) | 603, 3457 |
| FspBI | CTAG | 8 cut(s) | 132, 1284, 1527, 2355, 2655, 2711, 2906, 3558 |
| GlaI | GCGC | 7 cut(s) | 74, 1571, 1573, 1653, 3036, 3038, 3539 |
| GsaI | CCCAGC | 1 cut(s) | 1198 |
| GsuI | CTGGAG | 3 cut(s) | 2757, 2873, 3239 |
| HaeII | RGCGCY | 2 cut(s) | 76, 3541 |
| HapII | CCGG | 4 cut(s) | 303, 1429, 1476, 3194 |
| HgaI | GACGC | 1 cut(s) | 281 |
| HhaI | GCGC | 7 cut(s) | 75, 1572, 1574, 1654, 3037, 3039, 3540 |
| Hin6I | GCGC | 7 cut(s) | 73, 1570, 1572, 1652, 3035, 3037, 3538 |
| HinP1I | GCGC | 7 cut(s) | 73, 1570, 1572, 1652, 3035, 3037, 3538 |
| HincII | GTYRAC | 4 cut(s) | 148, 702, 1524, 3223 |
| HindII | GTYRAC | 4 cut(s) | 148, 702, 1524, 3223 |
| HindIII | AAGCTT | 7 cut(s) | 338, 440, 800, 1298, 1960, 2250, 3491 |
| HpaI | GTTAAC | 1 cut(s) | 3223 |
| HpaII | CCGG | 4 cut(s) | 303, 1429, 1476, 3194 |
| HpyCH4IV | ACGT | 3 cut(s) | 403, 566, 745 |
| HpySE526I | ACGT | 3 cut(s) | 403, 566, 745 |
| HspAI | GCGC | 7 cut(s) | 73, 1570, 1572, 1652, 3035, 3037, 3538 |
| Kpn2I | TCCGGA | 1 cut(s) | 1428 |
| KpnI | GGTACC | 1 cut(s) | 1856 |
| KspAI | GTTAAC | 1 cut(s) | 3223 |
| Kzo9I | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| LguI | GCTCTTC | 2 cut(s) | 53, 186 |
| LmnI | GCTCC | 8 cut(s) | 598, 1287, 2368, 2450, 2776, 2842, 3092, 3258 |
| MaeI | CTAG | 8 cut(s) | 132, 1284, 1527, 2355, 2655, 2711, 2906, 3558 |
| MaeII | ACGT | 3 cut(s) | 403, 566, 745 |
| MaeIII | GTNAC | 8 cut(s) | 404, 470, 1180, 2096, 2285, 2517, 2669, 2878 |
| MalI | GATC | 8 cut(s) | 816, 850, 1278, 1635, 2068, 2271, 2384, 3378 |
| MboI | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MflI | RGATCY | 2 cut(s) | 1276, 2066 |
| MhlI | GDGCHC | 5 cut(s) | 172, 603, 1822, 3417, 3457 |
| MlsI | TGGCCA | 2 cut(s) | 492, 3263 |
| MluNI | TGGCCA | 2 cut(s) | 492, 3263 |
| MlyI | GAGTC | 6 cut(s) | 143, 707, 721, 953, 2272, 3191 |
| MmeI | TCCRAC | 3 cut(s) | 2428, 2525, 3071 |
| Mox20I | TGGCCA | 2 cut(s) | 492, 3263 |
| Mph1103I | ATGCAT | 1 cut(s) | 2830 |
| MroI | TCCGGA | 1 cut(s) | 1428 |
| MroXI | GAANNNNTTC | 2 cut(s) | 930, 1830 |
| MscI | TGGCCA | 2 cut(s) | 492, 3263 |
| MslI | CAYNNNNRTG | 3 cut(s) | 783, 2422, 3075 |
| Msp20I | TGGCCA | 2 cut(s) | 492, 3263 |
| MspA1I | CMGCKG | 6 cut(s) | 1194, 2042, 2666, 2687, 3008, 3059 |
| MspI | CCGG | 4 cut(s) | 303, 1429, 1476, 3194 |
| MspR9I | CCNGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| MunI | CAATTG | 1 cut(s) | 123 |
| Mva1269I | GAATGC | 1 cut(s) | 2494 |
| MvaI | CCWGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| MvnI | CGCG | 3 cut(s) | 1572, 1905, 3037 |
| NcoI | CCATGG | 2 cut(s) | 493, 2799 |
| NdeI | CATATG | 2 cut(s) | 2338, 2932 |
| NdeII | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| NheI | GCTAGC | 1 cut(s) | 2654 |
| NmeAIII | GCCGAG | 1 cut(s) | 2716 |
| NmuCI | GTSAC | 5 cut(s) | 1180, 2096, 2285, 2517, 2878 |
| NsiI | ATGCAT | 1 cut(s) | 2830 |
| NspI | RCATGY | 7 cut(s) | 279, 895, 2828, 3035, 3080, 3175, 3551 |
| PaeI | GCATGC | 3 cut(s) | 279, 2828, 3551 |
| PagI | TCATGA | 1 cut(s) | 2266 |
| PauI | GCGCGC | 2 cut(s) | 1570, 3035 |
| PceI | AGGCCT | 2 cut(s) | 2910, 3067 |
| PciI | ACATGT | 1 cut(s) | 3076 |
| PciSI | GCTCTTC | 2 cut(s) | 53, 186 |
| PctI | GAATGC | 1 cut(s) | 2494 |
| PdmI | GAANNNNTTC | 2 cut(s) | 930, 1830 |
| PfeI | GAWTC | 5 cut(s) | 1336, 1432, 2036, 2224, 3214 |
| PflFI | GACNNNGTC | 1 cut(s) | 143 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1603 |
| PleI | GAGTC | 6 cut(s) | 143, 706, 721, 952, 2271, 3191 |
| PpsI | GAGTC | 6 cut(s) | 143, 706, 721, 952, 2271, 3191 |
| PscI | ACATGT | 1 cut(s) | 3076 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1897 |
| PshBI | ATTAAT | 2 cut(s) | 578, 2159 |
| Psp1406I | AACGTT | 1 cut(s) | 403 |
| Psp6I | CCWGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| PspEI | GGTNACC | 2 cut(s) | 2096, 2669 |
| PspFI | CCCAGC | 1 cut(s) | 1194 |
| PspGI | CCWGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| PspOMI | GGGCCC | 1 cut(s) | 3453 |
| PspPI | GGNCC | 9 cut(s) | 213, 631, 857, 1671, 1912, 2168, 2464, 3453, 3454 |
| PsuI | RGATCY | 2 cut(s) | 1276, 2066 |
| PsyI | GACNNNGTC | 1 cut(s) | 143 |
| PteI | GCGCGC | 2 cut(s) | 1570, 3035 |
| PvuII | CAGCTG | 5 cut(s) | 1194, 2666, 2687, 3008, 3059 |
| RsaI | GTAC | 9 cut(s) | 237, 487, 1156, 1257, 1295, 1534, 1854, 2872, 3236 |
| RsaNI | GTAC | 9 cut(s) | 236, 486, 1155, 1256, 1294, 1533, 1853, 2871, 3235 |
| RseI | CAYNNNNRTG | 3 cut(s) | 783, 2422, 3075 |
| SalI | GTCGAC | 1 cut(s) | 146 |
| SapI | GCTCTTC | 2 cut(s) | 53, 186 |
| Sau3AI | GATC | 8 cut(s) | 814, 848, 1276, 1633, 2066, 2269, 2382, 3376 |
| Sau96I | GGNCC | 9 cut(s) | 213, 631, 857, 1671, 1912, 2168, 2464, 3453, 3454 |
| ScaI | AGTACT | 2 cut(s) | 487, 2872 |
| SchI | GAGTC | 6 cut(s) | 143, 707, 721, 953, 2272, 3191 |
| ScrFI | CCNGG | 6 cut(s) | 617, 825, 2102, 3257, 3513, 3529 |
| SduI | GDGCHC | 5 cut(s) | 172, 603, 1822, 3417, 3457 |
| SfcI | CTRYAG | 2 cut(s) | 1170, 1365 |
| SinI | GGWCC | 4 cut(s) | 213, 857, 1671, 2168 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 783, 2422, 3075 |
| SmlI | CTYRAG | 1 cut(s) | 1271 |
| SmoI | CTYRAG | 1 cut(s) | 1271 |
| SpeI | ACTAGT | 2 cut(s) | 1526, 3557 |
| SphI | GCATGC | 3 cut(s) | 279, 2828, 3551 |
| SseBI | AGGCCT | 2 cut(s) | 2910, 3067 |
| SsiI | CCGC | 7 cut(s) | 153, 2009, 2042, 2492, 2560, 2594, 2652 |
| SspI | AATATT | 3 cut(s) | 653, 1047, 1410 |
| SspMI | CTAG | 8 cut(s) | 132, 1284, 1527, 2355, 2655, 2711, 2906, 3558 |
| StuI | AGGCCT | 2 cut(s) | 2910, 3067 |
| StyD4I | CCNGG | 6 cut(s) | 615, 823, 2100, 3255, 3511, 3527 |
| StyI | CCWWGG | 4 cut(s) | 246, 456, 493, 2799 |
| TaiI | ACGT | 3 cut(s) | 406, 569, 748 |
| TaqI | TCGA | 6 cut(s) | 5, 78, 147, 372, 1641, 3189 |
| TatI | WGTACW | 6 cut(s) | 235, 485, 1255, 1293, 1532, 2870 |
| TauI | GCSGC | 1 cut(s) | 2045 |
| TfiI | GAWTC | 5 cut(s) | 1336, 1432, 2036, 2224, 3214 |
| TscAI | CASTG | 8 cut(s) | 369, 962, 1242, 2188, 2239, 2409, 2998, 3429 |
| TseFI | GTSAC | 5 cut(s) | 1180, 2096, 2285, 2517, 2878 |
| Tsp45I | GTSAC | 5 cut(s) | 1180, 2096, 2285, 2517, 2878 |
| TspGWI | ACGGA | 5 cut(s) | 205, 323, 553, 2821, 2861 |
| TspRI | CASTG | 8 cut(s) | 369, 962, 1242, 2188, 2239, 2409, 2998, 3429 |
| Tth111I | GACNNNGTC | 1 cut(s) | 143 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1603 |
| VpaK11BI | GGWCC | 4 cut(s) | 213, 857, 1671, 2168 |
| VspI | ATTAAT | 2 cut(s) | 578, 2159 |
| XceI | RCATGY | 7 cut(s) | 279, 895, 2828, 3035, 3080, 3175, 3551 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1028, 2581 |
| XmiI | GTMKAC | 3 cut(s) | 147, 947, 1840 |
| XmnI | GAANNNNTTC | 2 cut(s) | 930, 1830 |
| XspI | CTAG | 8 cut(s) | 132, 1284, 1527, 2355, 2655, 2711, 2906, 3558 |
| ZrmI | AGTACT | 2 cut(s) | 487, 2872 |
| Zsp2I | ATGCAT | 1 cut(s) | 2830 |