Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007010

Physical Location & Seq

Genomic Coordinates Forward (+)

9024334 .. 9028395

Gene Structure 4062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G25880.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGGCACCAATCAGACTCAGATCTCCGATGAATATGTTACCGGTAACAGTTCCGGTGTAGGTGGGGGAATCTCTGATGTATACGGTGAAGATAGTGCCACGTTGGATCAACTTGTCACTCCTTGGGTTACCTCTGTCGCAAGTGGGTATACATTGATGCGTGATCCACGTTACAATAAAGGACTTGCTTTTACTGATAAAGAGAGAGATGCTCATTACATAACTGGTCTTCTTCCTCCTGTAGTTTTATCTCAAGATGTTCAGGAGAGGAAAGTGATGCATAATCTTCGTCAGTATACGGTTCCTTTGCAACGTTACATGGCTCTCATGGATCTTCAGGAAAGGAATGAGAGATTGTTTTATAAGCTTTTGATTGATAATGTGGAGGAGTTGCTTCCGGTTGTGTATACACCGACGGTTGGTGAGGCTTGCCAAAAGTATGGGAGCATTTATAGGAGGCCACAAGGTCTTTACATCAGCTTGAAAGAGAAGGGAAAGATTCTTGAAGTATTGAAGAATTGGCCACAGAGAGGGATTCAAGTTATTGTTGTTACCGATGGTGAGCGGATTCTCGGTCTTGGAGATCTTGGTTGCCAGGGAATGGGAATCCCTGTTGGGAAGCTTTCTCTTTACACAGCTTTGGGAGGAATCCGTCCATCGGCTTGCCTTCCAATAACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATAATGAGTTTTACATTGGCCTTAAACAGAAGAGGGCAAATGGCGAGGAATATGCAGAGTTTTTGCAGGAGTTTATGTGTGCTGTTAAACAAAACTATGGAGAGAAAGTGTTGGTGCAGTTTGAAGATTTTGCAAACCACCATGCGTTTGAGCTTCTCTCTAAGTACTGCTCAAGTCATCTCGTTTTCAATGATGATATCCAAGGAACTGCATCTGTGGTGCTTGCCGGGCTTATTGCGGCTCAGAAAGTACTTGGTAAAAGCCTAGCTGACCATACCTTTTTGTTCTTGGGTGCTGGAGAGGCTGGAACCGGAATCGCTGAGCTAATTGCTCTTAAAATTTCGAAAGAGACTGGAAAACCAATCGATGAGACCCGGAAGAAGATTTGGCTTGTGGACTCCAAGGGACTGATTGTTAGCGAACGCAAAGAATCGCTTCAACATTTCAAGCAGCCATGGGCGCATGACCACAAGCCTGTCAAGGAGCTCTTGGCAGCTGTTAATGCAATCAAGCCAACTGTTCTTATTGGAACCTCTGGTGTGGGTAAGACTTTCACAAAGGAAGTAGTGGAGGCCATGGCTACCTTGAACGAGAAACCATTGATTCTTGCACTCTCAAACCCAACTTCTCAAGCCGAGTGCACGGCGGAAGAAGCTTACACATGGACCAAGGGTCGTGCAATCTTTGCAAGTGGAAGCCCGTTTGACCCTGTTCAGTATGATGGCAAAAAATTCACGCCTGGCCAGGCAAACAACTGTTACATTTTCCCTGGTCTCGGTCTTGGTTTGATCATGTCCGGTGCCATTCGTGTCCGTGATGACATGCTTCTAGCAGCTTCGGAAGCGCTGGCCTCCCAAGTGACGGAAGAGAATTTTGCGAACGGACTGATCTATCCGCCTTTTGCAAACATCAGAAAGATCTCTGCTAACATTGCAGCCAGTGTGGGAGCCAAAACCTACGAACTCGGACTGGCATCGAATCTGCCTCGTCCTAAGGACCTCGTAAAGATGGCAGAGAGCTGCATGTACAGTCCTGTCTACAGAAACTTCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004470 GO:0004473 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006081 GO:0006082 GO:0006090 GO:0006098 GO:0006108 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009051 GO:0009117 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016043 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0019362 GO:0019637 GO:0019682 GO:0019693 GO:0019752 GO:0022607 GO:0030054 GO:0030312 GO:0031090 GO:0032787 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046496 GO:0046686 GO:0048046 GO:0050896 GO:0051156 GO:0051186 GO:0051259 GO:0051260 GO:0055044 GO:0055086 GO:0055114 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0072524 GO:0098588 GO:0098805 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

588

Amino Acids

64.61

Weight (kDa)

6.55

Isoelectric Point (pI)

31.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	113 - 293	1e-77	Malic enzyme, N-terminal domain
Malic_M	PF03949	304 - 461	3.7e-55	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11670 AT5G25880 AT5G25880 AT5G25880
fragaria_vesca	FvH4_2g35330 FvH4_2g35330 FvH4_2g35330
malus_domestica	MD08G1111500.v1.1 MD15G1091000.v1.1
prunus_persica	Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1
pyrus_communis	pycom08g09260 pycom15g08500
rosa_chinensis	RchiOBHm_Chr6g0306591
rosa_laevigata	RLG00000010782
rosa_multiflora	Rmu_sc0017624.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161630
rosa_rugosa	Rorug06G0350700 Rorug06G0350800
rosa_samantha	Rh6AG463100 Rh6BG437800
rosa_wichuraiana	Rw6G040350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	363
AccB1I	GGYRCC	2 cut(s)	5, 1511
AccB7I	CCANNNNNTGG	1 cut(s)	601
AccBSI	CCGCTC	1 cut(s)	565
AccI	GTMKAC	5 cut(s)	81, 149, 296, 407, 1749
AciI	CCGC	4 cut(s)	565, 950, 1358, 1607
AclI	AACGTT	1 cut(s)	313
AclWI	GGATC	3 cut(s)	114, 158, 339
AcoI	YGGCCR	2 cut(s)	521, 1453
AcsI	RAATTY	3 cut(s)	1050, 1442, 1582
AcuI	CTGAAG	1 cut(s)	320
AfaI	GTAC	4 cut(s)	691, 878, 963, 1739
AfeI	AGCGCT	1 cut(s)	1557
AfiI	CCNNNNNNNGG	6 cut(s)	419, 530, 601, 658, 1487, 1573
AgeI	ACCGGT	1 cut(s)	41
AhdI	GACNNNNNGTC	1 cut(s)	1383
AjnI	CCWGG	4 cut(s)	594, 1450, 1455, 1480
Alw21I	GWGCWC	2 cut(s)	1200, 1355
Alw26I	GTCTC	3 cut(s)	1055, 1076, 1490
Alw44I	GTGCAC	1 cut(s)	1351
AlwI	GGATC	3 cut(s)	114, 158, 339
Aor51HI	AGCGCT	1 cut(s)	1557
AoxI	GGCC	6 cut(s)	458, 521, 730, 1284, 1453, 1560
ApaLI	GTGCAC	1 cut(s)	1351
ApeKI	GCWGC	5 cut(s)	1162, 1205, 1544, 1646, 1731
ApoI	RAATTY	3 cut(s)	1050, 1442, 1582
AsiGI	ACCGGT	1 cut(s)	41
Asp700I	GAANNNNTTC	1 cut(s)	1146
AspLEI	GCGC	2 cut(s)	1174, 1558
AspS9I	GGNCC	2 cut(s)	1377, 1708
AsuC2I	CCSGG	2 cut(s)	940, 1087
AsuHPI	GGTGA	3 cut(s)	98, 434, 572
AsuII	TTCGAA	1 cut(s)	1055
AvaII	GGWCC	2 cut(s)	1377, 1708
AxyI	CCTNAGG	1 cut(s)	1704
BaeGI	GKGCMC	2 cut(s)	8, 1355
BalI	TGGCCA	2 cut(s)	523, 1455
BanI	GGYRCC	2 cut(s)	5, 1511
BanII	GRGCYC	1 cut(s)	1200
BbsI	GAAGAC	1 cut(s)	221
Bbv12I	GWGCWC	2 cut(s)	1200, 1355
BbvI	GCAGC	5 cut(s)	1174, 1217, 1556, 1658, 1718
BccI	CCATC	4 cut(s)	551, 664, 1427, 1714
BceAI	ACGGC	1 cut(s)	1371
BcgI	CGANNNNNNTGC	4 cut(s)	269, 303, 746, 780
BciT130I	CCWGG	4 cut(s)	596, 1452, 1457, 1482
BclI	TGATCA	1 cut(s)	1500
BcnI	CCSGG	2 cut(s)	940, 1087
BcoDI	GTCTC	3 cut(s)	1055, 1076, 1490
BfaI	CTAG	2 cut(s)	977, 1541
BfmI	CTRYAG	2 cut(s)	240, 1750
BfoI	RGCGCY	1 cut(s)	1559
BglII	AGATCT	3 cut(s)	21, 583, 1629
BisI	GCNGC	6 cut(s)	951, 1163, 1206, 1545, 1647, 1732
BlpI	GCTNAGC	1 cut(s)	1032
BlsI	GCNGC	6 cut(s)	952, 1164, 1207, 1546, 1648, 1733
BmcAI	AGTACT	2 cut(s)	878, 963
Bme1390I	CCNGG	6 cut(s)	596, 940, 1087, 1452, 1457, 1482
Bme18I	GGWCC	2 cut(s)	1377, 1708
BmeRI	GACNNNNNGTC	1 cut(s)	1383
BmgT120I	GGNCC	2 cut(s)	1377, 1708
BmiI	GGNNCC	6 cut(s)	7, 303, 1021, 1243, 1513, 1660
BmrFI	CCNGG	6 cut(s)	596, 940, 1087, 1452, 1457, 1482
BmsI	GCATC	5 cut(s)	147, 199, 267, 932, 1694
BpiI	GAAGAC	1 cut(s)	221
BplI	GAGNNNNNCTC	4 cut(s)	196, 228, 854, 886
BpmI	CTGGAG	1 cut(s)	1029
Bpu1102I	GCTNAGC	1 cut(s)	1032
Bpu14I	TTCGAA	1 cut(s)	1055
BpuEI	CTTGAG	3 cut(s)	237, 868, 1326
BpuMI	CCSGG	2 cut(s)	940, 1087
Bsa29I	ATCGAT	1 cut(s)	1077
BsaI	GGTCTC	2 cut(s)	1076, 1490
BsaJI	CCNNGG	8 cut(s)	122, 595, 913, 1113, 1166, 1287, 1380, 1480
BsaWI	WCCGGW	5 cut(s)	41, 53, 397, 1022, 1508
BsaXI	ACNNNNNCTCC	4 cut(s)	773, 803, 804, 834
Bsc4I	CCNNNNNNNGG	6 cut(s)	419, 530, 601, 658, 1487, 1573
Bse118I	RCCGGY	1 cut(s)	41
Bse1I	ACTGG	4 cut(s)	229, 1069, 1650, 1686
Bse21I	CCTNAGG	1 cut(s)	1704
Bse3DI	GCAATG	1 cut(s)	1641
BseBI	CCWGG	4 cut(s)	596, 1452, 1457, 1482
BseCI	ATCGAT	1 cut(s)	1077
BseDI	CCNNGG	8 cut(s)	122, 595, 913, 1113, 1166, 1287, 1380, 1480
BseLI	CCNNNNNNNGG	6 cut(s)	419, 530, 601, 658, 1487, 1573
BseMI	GCAATG	1 cut(s)	1641
BseMII	CTCAG	3 cut(s)	32, 968, 1023
BseNI	ACTGG	4 cut(s)	229, 1069, 1650, 1686
BseRI	GAGGAG	1 cut(s)	401
BseSI	GKGCMC	2 cut(s)	8, 1355
BseXI	GCAGC	5 cut(s)	1174, 1217, 1556, 1658, 1718
BsgI	GTGCAG	1 cut(s)	848
BshFI	GGCC	6 cut(s)	460, 523, 732, 1286, 1455, 1562
BshNI	GGYRCC	2 cut(s)	5, 1511
BshTI	ACCGGT	1 cut(s)	41
BshVI	ATCGAT	1 cut(s)	1077
BsiHKAI	GWGCWC	2 cut(s)	1200, 1355
BsiSI	CCGG	7 cut(s)	42, 54, 398, 939, 1023, 1087, 1509
BslFI	GGGAC	1 cut(s)	1131
BslI	CCNNNNNNNGG	6 cut(s)	419, 530, 601, 658, 1487, 1573
BsmAI	GTCTC	3 cut(s)	1055, 1076, 1490
BsmFI	GGGAC	1 cut(s)	1131
BsnI	GGCC	6 cut(s)	460, 523, 732, 1286, 1455, 1562
Bso31I	GGTCTC	2 cut(s)	1076, 1490
Bsp119I	TTCGAA	1 cut(s)	1055
Bsp1286I	GDGCHC	3 cut(s)	8, 1200, 1355
Bsp1407I	TGTACA	1 cut(s)	1737
Bsp143I	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
Bsp1720I	GCTNAGC	1 cut(s)	1032
Bsp19I	CCATGG	2 cut(s)	1166, 1287
BspACI	CCGC	4 cut(s)	565, 950, 1358, 1607
BspANI	GGCC	6 cut(s)	460, 523, 732, 1286, 1455, 1562
BspCNI	CTCAG	3 cut(s)	31, 967, 1024
BspDI	ATCGAT	1 cut(s)	1077
BspLI	GGNNCC	6 cut(s)	7, 303, 1021, 1243, 1513, 1660
BspPI	GGATC	3 cut(s)	114, 158, 339
BspT104I	TTCGAA	1 cut(s)	1055
BspT107I	GGYRCC	2 cut(s)	5, 1511
BspTNI	GGTCTC	2 cut(s)	1076, 1490
BsrBI	CCGCTC	1 cut(s)	565
BsrDI	GCAATG	1 cut(s)	1641
BsrFI	RCCGGY	1 cut(s)	41
BsrGI	TGTACA	1 cut(s)	1737
BsrI	ACTGG	4 cut(s)	229, 1069, 1650, 1686
BssAI	RCCGGY	1 cut(s)	41
BssECI	CCNNGG	8 cut(s)	122, 595, 913, 1113, 1166, 1287, 1380, 1480
BssMI	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
BssNAI	GTATAC	4 cut(s)	82, 150, 297, 408
BssT1I	CCWWGG	6 cut(s)	122, 913, 1113, 1166, 1287, 1380
Bst1107I	GTATAC	4 cut(s)	82, 150, 297, 408
Bst2UI	CCWGG	4 cut(s)	596, 1452, 1457, 1482
Bst4CI	ACNGT	7 cut(s)	50, 86, 301, 418, 1231, 1469, 1742
Bst6I	CTCTTC	2 cut(s)	737, 1572
BstAPI	GCANNNNNTGC	1 cut(s)	1397
BstAUI	TGTACA	1 cut(s)	1737
BstBI	TTCGAA	1 cut(s)	1055
BstC8I	GCNNGC	4 cut(s)	430, 664, 936, 1560
BstDEI	CTNAG	5 cut(s)	18, 873, 954, 1032, 1704
BstDSI	CCRYGG	2 cut(s)	1166, 1287
BstEII	GGTNACC	1 cut(s)	127
BstH2I	RGCGCY	1 cut(s)	1559
BstHHI	GCGC	2 cut(s)	1174, 1558
BstKTI	GATC	8 cut(s)	24, 109, 166, 334, 586, 1503, 1602, 1632
BstMAI	GTCTC	3 cut(s)	1055, 1076, 1490
BstMBI	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
BstMWI	GCNNNNNNNGC	8 cut(s)	940, 1013, 1171, 1214, 1364, 1397, 1553, 1643
BstNI	CCWGG	4 cut(s)	596, 1452, 1457, 1482
BstNSI	RCATGY	2 cut(s)	1537, 1738
BstPI	GGTNACC	1 cut(s)	127
BstSCI	CCNGG	6 cut(s)	594, 938, 1085, 1450, 1455, 1480
BstSFI	CTRYAG	2 cut(s)	240, 1750
BstSLI	GKGCMC	2 cut(s)	8, 1355
BstV1I	GCAGC	5 cut(s)	1174, 1217, 1556, 1658, 1718
BstV2I	GAAGAC	1 cut(s)	221
BstX2I	RGATCY	4 cut(s)	21, 331, 583, 1629
BstXI	CCANNNNNNTGG	2 cut(s)	440, 685
BstYI	RGATCY	4 cut(s)	21, 331, 583, 1629
BstZ17I	GTATAC	4 cut(s)	82, 150, 297, 408
Bsu15I	ATCGAT	1 cut(s)	1077
Bsu36I	CCTNAGG	1 cut(s)	1704
BsuRI	GGCC	6 cut(s)	460, 523, 732, 1286, 1455, 1562
BsuTUI	ATCGAT	1 cut(s)	1077
BtgI	CCRYGG	2 cut(s)	1166, 1287
BtsIMutI	CAGTG	1 cut(s)	1657
Cac8I	GCNNGC	4 cut(s)	430, 664, 936, 1560
CfoI	GCGC	2 cut(s)	1174, 1558
Cfr10I	RCCGGY	1 cut(s)	41
Cfr13I	GGNCC	2 cut(s)	1377, 1708
ClaI	ATCGAT	1 cut(s)	1077
Csp6I	GTAC	4 cut(s)	690, 877, 962, 1738
CspAI	ACCGGT	1 cut(s)	41
CviQI	GTAC	4 cut(s)	690, 877, 962, 1738
DdeI	CTNAG	5 cut(s)	18, 873, 954, 1032, 1704
DpnI	GATC	8 cut(s)	23, 108, 165, 333, 585, 1502, 1601, 1631
DpnII	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
DriI	GACNNNNNGTC	1 cut(s)	1383
EaeI	YGGCCR	2 cut(s)	521, 1453
Eam1104I	CTCTTC	2 cut(s)	737, 1572
Eam1105I	GACNNNNNGTC	1 cut(s)	1383
EarI	CTCTTC	2 cut(s)	737, 1572
EciI	GGCGGA	2 cut(s)	1373, 1596
Ecl136II	GAGCTC	1 cut(s)	1198
Eco130I	CCWWGG	6 cut(s)	122, 913, 1113, 1166, 1287, 1380
Eco24I	GRGCYC	1 cut(s)	1200
Eco31I	GGTCTC	2 cut(s)	1076, 1490
Eco32I	GATATC	1 cut(s)	910
Eco47I	GGWCC	2 cut(s)	1377, 1708
Eco47III	AGCGCT	1 cut(s)	1557
Eco53kI	GAGCTC	1 cut(s)	1198
Eco57I	CTGAAG	1 cut(s)	320
Eco81I	CCTNAGG	1 cut(s)	1704
Eco91I	GGTNACC	1 cut(s)	127
EcoICRI	GAGCTC	1 cut(s)	1198
EcoO109I	RGGNCCY	1 cut(s)	1708
EcoO65I	GGTNACC	1 cut(s)	127
EcoRII	CCWGG	4 cut(s)	594, 1450, 1455, 1480
EcoRV	GATATC	1 cut(s)	910
EcoT14I	CCWWGG	6 cut(s)	122, 913, 1113, 1166, 1287, 1380
EcoT22I	ATGCAT	1 cut(s)	282
EcoT38I	GRGCYC	1 cut(s)	1200
ErhI	CCWWGG	6 cut(s)	122, 913, 1113, 1166, 1287, 1380
FalI	AAGNNNNNCTT	4 cut(s)	1131, 1163, 1184, 1216
FaqI	GGGAC	1 cut(s)	1131
FbaI	TGATCA	1 cut(s)	1500
FblI	GTMKAC	5 cut(s)	81, 149, 296, 407, 1749
Fnu4HI	GCNGC	6 cut(s)	951, 1163, 1206, 1545, 1647, 1732
FriOI	GRGCYC	1 cut(s)	1200
Fsp4HI	GCNGC	6 cut(s)	951, 1163, 1206, 1545, 1647, 1732
FspBI	CTAG	2 cut(s)	977, 1541
GlaI	GCGC	2 cut(s)	1173, 1557
GluI	GCNGC	6 cut(s)	951, 1163, 1206, 1545, 1647, 1732
GsuI	CTGGAG	1 cut(s)	1029
HaeII	RGCGCY	1 cut(s)	1559
HaeIII	GGCC	6 cut(s)	460, 523, 732, 1286, 1455, 1562
HapII	CCGG	7 cut(s)	42, 54, 398, 939, 1023, 1087, 1509
HhaI	GCGC	2 cut(s)	1174, 1558
Hin6I	GCGC	2 cut(s)	1172, 1556
HinP1I	GCGC	2 cut(s)	1172, 1556
HindIII	AAGCTT	3 cut(s)	365, 620, 1365
HpaII	CCGG	7 cut(s)	42, 54, 398, 939, 1023, 1087, 1509
HphI	GGTGA	3 cut(s)	98, 434, 572
Hpy166II	GTNNAC	7 cut(s)	82, 150, 297, 408, 1108, 1353, 1750
Hpy188I	TCNGA	8 cut(s)	15, 21, 28, 76, 957, 1552, 1625, 1679
Hpy188III	TCNNGA	4 cut(s)	254, 263, 338, 503
Hpy8I	GTNNAC	7 cut(s)	82, 150, 297, 408, 1108, 1353, 1750
Hpy99I	CGWCG	1 cut(s)	418
HpyAV	CCTTC	2 cut(s)	484, 677
HpyCH4III	ACNGT	7 cut(s)	50, 86, 301, 418, 1231, 1469, 1742
HpyCH4IV	ACGT	3 cut(s)	101, 169, 313
HpyF10VI	GCNNNNNNNGC	8 cut(s)	940, 1013, 1171, 1214, 1364, 1397, 1553, 1643
HpyF3I	CTNAG	5 cut(s)	18, 873, 954, 1032, 1704
HpySE526I	ACGT	3 cut(s)	101, 169, 313
HspAI	GCGC	2 cut(s)	1172, 1556
Ksp22I	TGATCA	1 cut(s)	1500
Kzo9I	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
LmnI	GCTCC	3 cut(s)	444, 1195, 1658
Lsp1109I	GCAGC	5 cut(s)	1174, 1217, 1556, 1658, 1718
LweI	GCATC	5 cut(s)	147, 199, 267, 932, 1694
MaeI	CTAG	2 cut(s)	977, 1541
MaeII	ACGT	3 cut(s)	101, 169, 313
MaeIII	GTNAC	9 cut(s)	37, 44, 115, 127, 170, 314, 550, 1469, 1570
MalI	GATC	8 cut(s)	23, 108, 165, 333, 585, 1502, 1601, 1631
MbiI	CCGCTC	1 cut(s)	565
MboI	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
MflI	RGATCY	4 cut(s)	21, 331, 583, 1629
MhlI	GDGCHC	3 cut(s)	8, 1200, 1355
MlsI	TGGCCA	2 cut(s)	523, 1455
MluCI	AATT	5 cut(s)	517, 1038, 1050, 1442, 1582
MluNI	TGGCCA	2 cut(s)	523, 1455
MlyI	GAGTC	2 cut(s)	10, 1103
MmeI	TCCRAC	1 cut(s)	84
Mox20I	TGGCCA	2 cut(s)	523, 1455
Mph1103I	ATGCAT	1 cut(s)	282
MroXI	GAANNNNTTC	1 cut(s)	1146
MscI	TGGCCA	2 cut(s)	523, 1455
MseI	TTAA	5 cut(s)	735, 798, 1047, 1212, 1765
MslI	CAYNNNNRTG	1 cut(s)	683
Msp20I	TGGCCA	2 cut(s)	523, 1455
MspA1I	CMGCKG	1 cut(s)	1208
MspI	CCGG	7 cut(s)	42, 54, 398, 939, 1023, 1087, 1509
MspR9I	CCNGG	6 cut(s)	596, 940, 1087, 1452, 1457, 1482
MvaI	CCWGG	4 cut(s)	596, 1452, 1457, 1482
MwoI	GCNNNNNNNGC	8 cut(s)	940, 1013, 1171, 1214, 1364, 1397, 1553, 1643
NciI	CCSGG	2 cut(s)	940, 1087
NcoI	CCATGG	2 cut(s)	1166, 1287
NdeII	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
NlaIV	GGNNCC	6 cut(s)	7, 303, 1021, 1243, 1513, 1660
NmeAIII	GCCGAG	1 cut(s)	1372
NmuCI	GTSAC	2 cut(s)	115, 1570
NsiI	ATGCAT	1 cut(s)	282
NspI	RCATGY	2 cut(s)	1537, 1738
NspV	TTCGAA	1 cut(s)	1055
PdmI	GAANNNNTTC	1 cut(s)	1146
PflMI	CCANNNNNTGG	1 cut(s)	601
PinAI	ACCGGT	1 cut(s)	41
PkrI	GCNGC	6 cut(s)	952, 1164, 1207, 1546, 1648, 1733
PleI	GAGTC	2 cut(s)	10, 1103
PpsI	GAGTC	2 cut(s)	10, 1103
PpuMI	RGGWCCY	1 cut(s)	1708
PsiI	TTATAA	1 cut(s)	363
Psp124BI	GAGCTC	1 cut(s)	1200
Psp1406I	AACGTT	1 cut(s)	313
Psp5II	RGGWCCY	1 cut(s)	1708
Psp6I	CCWGG	4 cut(s)	594, 1450, 1455, 1480
PspEI	GGTNACC	1 cut(s)	127
PspGI	CCWGG	4 cut(s)	594, 1450, 1455, 1480
PspN4I	GGNNCC	6 cut(s)	7, 303, 1021, 1243, 1513, 1660
PspPI	GGNCC	2 cut(s)	1377, 1708
PspPPI	RGGWCCY	1 cut(s)	1708
PsuI	RGATCY	4 cut(s)	21, 331, 583, 1629
PvuII	CAGCTG	1 cut(s)	1208
RsaI	GTAC	4 cut(s)	691, 878, 963, 1739
RsaNI	GTAC	4 cut(s)	690, 877, 962, 1738
RseI	CAYNNNNRTG	1 cut(s)	683
SacI	GAGCTC	1 cut(s)	1200
SaqAI	TTAA	5 cut(s)	735, 798, 1047, 1212, 1765
SatI	GCNGC	6 cut(s)	951, 1163, 1206, 1545, 1647, 1732
Sau3AI	GATC	8 cut(s)	21, 106, 163, 331, 583, 1500, 1599, 1629
Sau96I	GGNCC	2 cut(s)	1377, 1708
ScaI	AGTACT	2 cut(s)	878, 963
SchI	GAGTC	2 cut(s)	10, 1103
ScrFI	CCNGG	6 cut(s)	596, 940, 1087, 1452, 1457, 1482
SduI	GDGCHC	3 cut(s)	8, 1200, 1355
SfaNI	GCATC	5 cut(s)	147, 199, 267, 932, 1694
SfcI	CTRYAG	2 cut(s)	240, 1750
SfuI	TTCGAA	1 cut(s)	1055
SinI	GGWCC	2 cut(s)	1377, 1708
SmiMI	CAYNNNNRTG	1 cut(s)	683
SmlI	CTYRAG	3 cut(s)	252, 883, 1341
SmoI	CTYRAG	3 cut(s)	252, 883, 1341
Sse9I	AATT	5 cut(s)	517, 1038, 1050, 1442, 1582
SsiI	CCGC	4 cut(s)	565, 950, 1358, 1607
SspMI	CTAG	2 cut(s)	977, 1541
SstI	GAGCTC	1 cut(s)	1200
StyD4I	CCNGG	6 cut(s)	594, 938, 1085, 1450, 1455, 1480
StyI	CCWWGG	6 cut(s)	122, 913, 1113, 1166, 1287, 1380
TaaI	ACNGT	7 cut(s)	50, 86, 301, 418, 1231, 1469, 1742
TaiI	ACGT	3 cut(s)	104, 172, 316
TaqI	TCGA	3 cut(s)	1055, 1077, 1688
TaqII	GACCGA	2 cut(s)	563, 1478
TasI	AATT	5 cut(s)	517, 1038, 1050, 1442, 1582
TatI	WGTACW	3 cut(s)	876, 961, 1737
TauI	GCSGC	1 cut(s)	953
Tru1I	TTAA	5 cut(s)	735, 798, 1047, 1212, 1765
Tru9I	TTAA	5 cut(s)	735, 798, 1047, 1212, 1765
TscAI	CASTG	1 cut(s)	1657
TseFI	GTSAC	2 cut(s)	115, 1570
TseI	GCWGC	5 cut(s)	1162, 1205, 1544, 1646, 1731
Tsp45I	GTSAC	2 cut(s)	115, 1570
TspDTI	ATGAA	1 cut(s)	45
TspGWI	ACGGA	5 cut(s)	641, 1514, 1589, 1608, 1751
TspRI	CASTG	1 cut(s)	1657
Van91I	CCANNNNNTGG	1 cut(s)	601
VneI	GTGCAC	1 cut(s)	1351
VpaK11BI	GGWCC	2 cut(s)	1377, 1708
XapI	RAATTY	3 cut(s)	1050, 1442, 1582
XceI	RCATGY	2 cut(s)	1537, 1738
XmiI	GTMKAC	5 cut(s)	81, 149, 296, 407, 1749
XmnI	GAANNNNTTC	1 cut(s)	1146
XspI	CTAG	2 cut(s)	977, 1541
ZrmI	AGTACT	2 cut(s)	878, 963
Zsp2I	ATGCAT	1 cut(s)	282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.