Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007010

Physical Location & Seq

Genomic Coordinates Reverse (-)

4305734 .. 4310531

Gene Structure 4798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010782

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGATGATGTCCCTGACCAGACGCACTTTTCTGAAGAGAATAGTGGGTGTGGGAGAACCCAAGGTTTGGGCTTTCATGGGGAGTATAGTGAAGGAGATGGAGAGCAAGGCTGGTTTTGGTGGGGGTGTTCAGGACGTGTACGGTGAGGATTGTGCCACGGAGGATCAGGTTCTCACCCCCTGGACTGCTTCTGTTGCAAGTGGACATAATTTGTTGCGAGAACCACGCTACAACAAAGGACTTGCCTTCACTGAGAAGGAGAGAGATGCTCATTACTTACGTGGCCTTCTGCCTCCAGCCGTCCTGACCCAAGAGCTTCAGGAAAAGAAGATGATGCACAATCTTCGAAAATATGAGGTTCCATTGCAAAGATATATGGCCATGATGGATCTTCAGGAGAGAAATGAAGGGCTGTTTTATAAGCTTTTGATTGATAATGTTGAGGAACTGCTTCCTGTCGTGTACACCCCTACAGTTGGTGAGGCTTGCCAAAAATATGGTAGCATTTTCAGGCGTCCTCAGGGTCTTTATGTCAGTTTAAAAGACAAGGGAAAAATCCTCGAAGTATTAAAAAACTGGCCAGAAAGGAGAATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATTCTGGGGCTAGGAGATCTTGGCTGTCAGGGAATGGGAATTCCAGTTGGAAAGCTTTCTTTGTATACAGCATTGGGAGGAGTTCCTCCTTCAGCATGCTTGCCTATAACCATTGACGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACACTGGGCTTAAGCACAAGAGGGCAACTGGGCAGGAATATGAAGAGCTTCTTGAGGAATTCATGACTGCAGTCAAGAGGAATTATGGGGAGAAAATTCTAGTTCAGTTTGAAGATTTTGCAAACCACAATGCATTTGAGCTGCTGTCTAAATACAGTTCAAGTCACCTTGTGTTTAATGATGATATACAGGGAACAGCATCTGTGGTGTTAGCAGGGCTTATAGCATCCTTGAAATTAATTGGGGGAACTTTAGCTGATCATACTTTCTTATTTTTGGGTGCCGGAGAGGCTGGAACTGGTATAGCGGAGCTTATTGCTCTTGAGATATCAAAAAAGACCAAAGCTCCAGTTGAAGAAACCCGTAAGAAGATTTGGCTTGTGGATTCAAAGGGATTGATTGTTCAATCTCGTGTAGAATCACTTCAACATTTTAAGAAGCCTTGGGCTCATGAGCATGAACCCGTAAGGGAACTTGTCGATGCTGTGAAGGCAATCAAACCAACAGTGTTGATAGGAACATCTGGTGTAGGAAAGCAATTTACACAGGAAGTGGTCGAGGCCATGGCATCTTTTAATGAGAAACCTCTGATCCTCGCTCTTTCCAACCCAACATCACAATCTGAGTGTACTGCTGAAGAAGCTTACACATGGACCAAGGGTCAAGCAATCTTTGCTAGTGGAAGCCCATTTGACCCGGTTGAATATGAGGACAAACTCCTAGTGCCTGGCCAGGCCAACAATGCTTACATATTTCCTGGTTTCGGTTTGGGATTGATCATCTCTGGTGCCATTCGTGTACACGATGAAATGCTTTTGGCAGCCTCTGAAGCTTTGGCTACCCAAGTCACCCAAGAAAACTACGACAAAGGATTGATTTACCCACCATTTACCAACATCAGAAAGATATCAGCAAACATCGCTGCTAAGGTCGCTGCTACGGTTTATGACCTTGGTCTGGCTTCTAATCTGCCTCGACCAAAAGATCTTGTTAAGTATGCAGAGAGCAGAATGTACAGCCCACTCTACAGAAACTATCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004470 GO:0004473 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006081 GO:0006082 GO:0006090 GO:0006098 GO:0006108 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006739 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009051 GO:0009117 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016043 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0019362 GO:0019637 GO:0019682 GO:0019693 GO:0019752 GO:0022607 GO:0030054 GO:0030312 GO:0031090 GO:0032787 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046496 GO:0046686 GO:0048046 GO:0050896 GO:0051156 GO:0051186 GO:0051259 GO:0051260 GO:0055044 GO:0055086 GO:0055114 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0072524 GO:0098588 GO:0098805 GO:1901135 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

608

Amino Acids

67.28

Weight (kDa)

6.09

Isoelectric Point (pI)

40.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	132 - 312	8.1e-78	Malic enzyme, N-terminal domain
Malic_M	PF03949	323 - 574	7.6e-96	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11670 AT5G25880 AT5G25880 AT5G25880
fragaria_vesca	FvH4_2g35330 FvH4_2g35330 FvH4_2g35330
malus_domestica	MD08G1111500.v1.1 MD15G1091000.v1.1
prunus_persica	Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1 Prupe.1G445400_v2.0.a1
pyrus_communis	pycom08g09260 pycom15g08500
rosa_chinensis	RchiOBHm_Chr6g0306591
rosa_laevigata	RLG00000010782
rosa_multiflora	Rmu_sc0017624.1_g000001
rosa_roxburghii	Rroxscaffold_7G00161630
rosa_rugosa	Rorug06G0350700 Rorug06G0350800
rosa_samantha	Rh6AG463100 Rh6BG437800
rosa_wichuraiana	Rw6G040350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	420
AccB1I	GGYRCC	2 cut(s)	1061, 1568
AccB7I	CCANNNNNTGG	1 cut(s)	66
AccI	GTMKAC	1 cut(s)	689
AciI	CCGC	1 cut(s)	1088
AclWI	GGATC	3 cut(s)	171, 396, 1366
AcoI	YGGCCR	3 cut(s)	378, 578, 1510
AcsI	RAATTY	4 cut(s)	591, 663, 839, 876
AcuI	CTGAAG	6 cut(s)	53, 302, 377, 699, 1437, 1629
AcyI	GRCGYC	1 cut(s)	514
AdeI	CACNNNGTG	1 cut(s)	952
AfaI	GTAC	5 cut(s)	140, 464, 1411, 1581, 1796
AfiI	CCNNNNNNNGG	4 cut(s)	66, 476, 1544, 1738
AflII	CTTAAG	1 cut(s)	791
AflIII	ACRYGT	1 cut(s)	135
AgsI	TTSAA	9 cut(s)	596, 893, 942, 1015, 1136, 1170, 1187, 1208, 1484
AhdI	GACNNNNNGTC	1 cut(s)	1440
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	4 cut(s)	179, 1507, 1512, 1537
AloI	GAACNNNNNNTCC	2 cut(s)	1167, 1199
AlwI	GGATC	3 cut(s)	171, 396, 1366
AlwNI	CAGNNNCTG	2 cut(s)	983, 1607
AoxI	GGCC	6 cut(s)	283, 378, 578, 1341, 1510, 1515
ApeKI	GCWGC	4 cut(s)	922, 1601, 1703, 1715
ApoI	RAATTY	4 cut(s)	591, 663, 839, 876
AseI	ATTAAT	1 cut(s)	1019
Asp700I	GAANNNNTTC	4 cut(s)	450, 679, 828, 1203
AspS9I	GGNCC	1 cut(s)	1434
AsuC2I	CCSGG	1 cut(s)	1478
AsuHPI	GGTGA	6 cut(s)	155, 166, 491, 629, 938, 1621
AsuII	TTCGAA	1 cut(s)	346
AvaII	GGWCC	1 cut(s)	1434
AxyI	CCTNAGG	1 cut(s)	519
BalI	TGGCCA	3 cut(s)	380, 580, 1512
BanI	GGYRCC	2 cut(s)	1061, 1568
BanII	GRGCYC	1 cut(s)	1231
BarI	GAAGNNNNNNTAC	2 cut(s)	1188, 1220
BauI	CACGAG	1 cut(s)	1191
BbvI	GCAGC	4 cut(s)	909, 1613, 1690, 1702
BccI	CCATC	3 cut(s)	91, 379, 608
BceAI	ACGGC	1 cut(s)	284
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	4 cut(s)	181, 1509, 1514, 1539
BclI	TGATCA	2 cut(s)	1039, 1557
BcnI	CCSGG	1 cut(s)	1478
BfaI	CTAG	4 cut(s)	635, 881, 1458, 1502
BfmI	CTRYAG	3 cut(s)	471, 849, 1807
BfrI	CTTAAG	1 cut(s)	791
BglI	GCCNNNNNGGC	1 cut(s)	1070
BglII	AGATCT	2 cut(s)	640, 1765
BisI	GCNGC	4 cut(s)	923, 1602, 1704, 1716
BlsI	GCNGC	4 cut(s)	924, 1603, 1705, 1717
Bme1390I	CCNGG	5 cut(s)	181, 1478, 1509, 1514, 1539
Bme18I	GGWCC	1 cut(s)	1434
BmeRI	GACNNNNNGTC	1 cut(s)	1440
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	1 cut(s)	1434
BmiI	GGNNCC	3 cut(s)	360, 1063, 1570
BmrFI	CCNGG	5 cut(s)	181, 1478, 1509, 1514, 1539
BmrI	ACTGGG	2 cut(s)	795, 819
BmsI	GCATC	6 cut(s)	256, 324, 989, 1016, 1252, 1358
BmuI	ACTGGG	2 cut(s)	795, 819
BoxI	GACNNNNGTC	2 cut(s)	851, 1734
BplI	GAGNNNNNCTC	2 cut(s)	253, 285
BpmI	CTGGAG	2 cut(s)	279, 1113
Bpu10I	CCTNAGC	1 cut(s)	1707
Bpu14I	TTCGAA	1 cut(s)	346
BpuEI	CTTGAG	2 cut(s)	854, 1124
BpuMI	CCSGG	1 cut(s)	1478
BsaAI	YACGTR	1 cut(s)	281
BsaHI	GRCGYC	1 cut(s)	514
BsaJI	CCNNGG	7 cut(s)	60, 156, 179, 1223, 1344, 1437, 1732
BsaXI	ACNNNNNCTCC	2 cut(s)	1111, 1141
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 476, 1544, 1738
Bse1I	ACTGG	6 cut(s)	581, 668, 790, 814, 1084, 1130
Bse21I	CCTNAGG	1 cut(s)	519
Bse3DI	GCAATG	1 cut(s)	362
BseBI	CCWGG	4 cut(s)	181, 1509, 1514, 1539
BseDI	CCNNGG	7 cut(s)	60, 156, 179, 1223, 1344, 1437, 1732
BseGI	GGATG	1 cut(s)	1007
BseLI	CCNNNNNNNGG	4 cut(s)	66, 476, 1544, 1738
BseMI	GCAATG	1 cut(s)	362
BseMII	CTCAG	3 cut(s)	243, 533, 1395
BseNI	ACTGG	6 cut(s)	581, 668, 790, 814, 1084, 1130
BseRI	GAGGAG	1 cut(s)	717
BseXI	GCAGC	4 cut(s)	909, 1613, 1690, 1702
BshFI	GGCC	6 cut(s)	285, 380, 580, 1343, 1512, 1517
BshNI	GGYRCC	2 cut(s)	1061, 1568
BsiSI	CCGG	2 cut(s)	1065, 1478
BslI	CCNNNNNNNGG	4 cut(s)	66, 476, 1544, 1738
BsnI	GGCC	6 cut(s)	285, 380, 580, 1343, 1512, 1517
Bsp119I	TTCGAA	1 cut(s)	346
Bsp1286I	GDGCHC	1 cut(s)	1231
Bsp1407I	TGTACA	3 cut(s)	462, 1579, 1794
Bsp143I	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
Bsp19I	CCATGG	1 cut(s)	1344
BspACI	CCGC	1 cut(s)	1088
BspANI	GGCC	6 cut(s)	285, 380, 580, 1343, 1512, 1517
BspCNI	CTCAG	3 cut(s)	244, 532, 1396
BspHI	TCATGA	2 cut(s)	843, 1231
BspLI	GGNNCC	3 cut(s)	360, 1063, 1570
BspMAI	CTGCAG	1 cut(s)	853
BspPI	GGATC	3 cut(s)	171, 396, 1366
BspQI	GCTCTTC	1 cut(s)	819
BspT104I	TTCGAA	1 cut(s)	346
BspT107I	GGYRCC	2 cut(s)	1061, 1568
BspTI	CTTAAG	1 cut(s)	791
BsrDI	GCAATG	1 cut(s)	362
BsrGI	TGTACA	3 cut(s)	462, 1579, 1794
BsrI	ACTGG	6 cut(s)	581, 668, 790, 814, 1084, 1130
BssECI	CCNNGG	7 cut(s)	60, 156, 179, 1223, 1344, 1437, 1732
BssMI	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
BssNAI	GTATAC	1 cut(s)	690
BssNI	GRCGYC	1 cut(s)	514
BssSI	CACGAG	1 cut(s)	1191
BssT1I	CCWWGG	5 cut(s)	60, 1223, 1344, 1437, 1732
Bst1107I	GTATAC	1 cut(s)	690
Bst2BI	CACGAG	1 cut(s)	1191
Bst2UI	CCWGG	4 cut(s)	181, 1509, 1514, 1539
Bst4CI	ACNGT	5 cut(s)	143, 475, 938, 1288, 1723
Bst6I	CTCTTC	2 cut(s)	29, 819
BstACI	GRCGYC	1 cut(s)	514
BstAFI	CTTAAG	1 cut(s)	791
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstAUI	TGTACA	3 cut(s)	462, 1579, 1794
BstBAI	YACGTR	1 cut(s)	281
BstBI	TTCGAA	1 cut(s)	346
BstC8I	GCNNGC	3 cut(s)	487, 721, 725
BstDEI	CTNAG	4 cut(s)	252, 519, 1404, 1707
BstDSI	CCRYGG	2 cut(s)	156, 1344
BstF5I	GGATG	1 cut(s)	1007
BstKTI	GATC	7 cut(s)	166, 391, 643, 1042, 1374, 1560, 1768
BstMBI	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
BstMWI	GCNNNNNNNGC	9 cut(s)	194, 1070, 1271, 1421, 1454, 1523, 1610, 1700, 1712
BstNI	CCWGG	4 cut(s)	181, 1509, 1514, 1539
BstNSI	RCATGY	1 cut(s)	723
BstPAI	GACNNNNGTC	2 cut(s)	851, 1734
BstSCI	CCNGG	5 cut(s)	179, 1476, 1507, 1512, 1537
BstSFI	CTRYAG	3 cut(s)	471, 849, 1807
BstV1I	GCAGC	4 cut(s)	909, 1613, 1690, 1702
BstX2I	RGATCY	3 cut(s)	388, 640, 1765
BstXI	CCANNNNNNTGG	1 cut(s)	497
BstYI	RGATCY	3 cut(s)	388, 640, 1765
BstZ17I	GTATAC	1 cut(s)	690
Bsu36I	CCTNAGG	1 cut(s)	519
BsuRI	GGCC	6 cut(s)	285, 380, 580, 1343, 1512, 1517
BtgI	CCRYGG	2 cut(s)	156, 1344
BtgZI	GCGATG	1 cut(s)	1684
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	1 cut(s)	1007
BtsIMutI	CAGTG	3 cut(s)	249, 783, 1293
Cac8I	GCNNGC	3 cut(s)	487, 721, 725
CaiI	CAGNNNCTG	2 cut(s)	983, 1607
CciI	TCATGA	2 cut(s)	843, 1231
Cfr13I	GGNCC	1 cut(s)	1434
CseI	GACGC	2 cut(s)	30, 503
Csp6I	GTAC	5 cut(s)	139, 463, 1410, 1580, 1795
CviAII	CATG	8 cut(s)	76, 382, 720, 844, 1232, 1238, 1345, 1431
CviQI	GTAC	5 cut(s)	139, 463, 1410, 1580, 1795
DdeI	CTNAG	4 cut(s)	252, 519, 1404, 1707
DpnI	GATC	7 cut(s)	165, 390, 642, 1041, 1373, 1559, 1767
DpnII	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
DraI	TTTAAA	1 cut(s)	540
DraIII	CACNNNGTG	1 cut(s)	952
DriI	GACNNNNNGTC	1 cut(s)	1440
EaeI	YGGCCR	3 cut(s)	378, 578, 1510
Eam1104I	CTCTTC	2 cut(s)	29, 819
Eam1105I	GACNNNNNGTC	1 cut(s)	1440
EarI	CTCTTC	2 cut(s)	29, 819
Eco130I	CCWWGG	5 cut(s)	60, 1223, 1344, 1437, 1732
Eco24I	GRGCYC	1 cut(s)	1231
Eco32I	GATATC	2 cut(s)	1110, 1689
Eco47I	GGWCC	1 cut(s)	1434
Eco57I	CTGAAG	6 cut(s)	53, 302, 377, 699, 1437, 1629
Eco81I	CCTNAGG	1 cut(s)	519
EcoRI	GAATTC	3 cut(s)	591, 663, 839
EcoRII	CCWGG	4 cut(s)	179, 1507, 1512, 1537
EcoRV	GATATC	2 cut(s)	1110, 1689
EcoT14I	CCWWGG	5 cut(s)	60, 1223, 1344, 1437, 1732
EcoT22I	ATGCAT	1 cut(s)	916
EcoT38I	GRGCYC	1 cut(s)	1231
ErhI	CCWWGG	5 cut(s)	60, 1223, 1344, 1437, 1732
FaeI	CATG	8 cut(s)	79, 385, 723, 847, 1235, 1241, 1348, 1434
FalI	AAGNNNNNCTT	2 cut(s)	816, 848
FatI	CATG	8 cut(s)	75, 381, 719, 843, 1231, 1237, 1344, 1430
FbaI	TGATCA	2 cut(s)	1039, 1557
FblI	GTMKAC	1 cut(s)	689
Fnu4HI	GCNGC	4 cut(s)	923, 1602, 1704, 1716
FokI	GGATG	1 cut(s)	994
FriOI	GRGCYC	1 cut(s)	1231
Fsp4HI	GCNGC	4 cut(s)	923, 1602, 1704, 1716
FspBI	CTAG	4 cut(s)	635, 881, 1458, 1502
GluI	GCNGC	4 cut(s)	923, 1602, 1704, 1716
GsuI	CTGGAG	2 cut(s)	279, 1113
HaeIII	GGCC	6 cut(s)	285, 380, 580, 1343, 1512, 1517
HapII	CCGG	2 cut(s)	1065, 1478
HgaI	GACGC	2 cut(s)	30, 503
Hin1I	GRCGYC	1 cut(s)	514
Hin1II	CATG	8 cut(s)	79, 385, 723, 847, 1235, 1241, 1348, 1434
HindIII	AAGCTT	4 cut(s)	422, 677, 1422, 1611
HinfI	GANTC	2 cut(s)	1166, 1199
HpaII	CCGG	2 cut(s)	1065, 1478
HphI	GGTGA	6 cut(s)	155, 166, 491, 629, 938, 1621
Hpy166II	GTNNAC	8 cut(s)	139, 203, 463, 465, 690, 1410, 1580, 1582
Hpy188I	TCNGA	5 cut(s)	33, 1371, 1405, 1609, 1682
Hpy188III	TCNNGA	9 cut(s)	131, 304, 320, 395, 833, 844, 856, 1103, 1232
Hpy8I	GTNNAC	8 cut(s)	139, 203, 463, 465, 690, 1410, 1580, 1582
HpyAV	CCTTC	7 cut(s)	85, 250, 256, 296, 401, 723, 1264
HpyCH4III	ACNGT	5 cut(s)	143, 475, 938, 1288, 1723
HpyCH4IV	ACGT	3 cut(s)	135, 280, 741
HpyCH4V	TGCA	7 cut(s)	197, 337, 367, 851, 902, 914, 1781
HpyF10VI	GCNNNNNNNGC	9 cut(s)	194, 1070, 1271, 1421, 1454, 1523, 1610, 1700, 1712
HpyF3I	CTNAG	4 cut(s)	252, 519, 1404, 1707
HpySE526I	ACGT	3 cut(s)	135, 280, 741
Hsp92I	GRCGYC	1 cut(s)	514
Hsp92II	CATG	8 cut(s)	79, 385, 723, 847, 1235, 1241, 1348, 1434
Ksp22I	TGATCA	2 cut(s)	1039, 1557
Kzo9I	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
LguI	GCTCTTC	1 cut(s)	819
LmnI	GCTCC	2 cut(s)	1090, 1132
Lsp1109I	GCAGC	4 cut(s)	909, 1613, 1690, 1702
LweI	GCATC	6 cut(s)	256, 324, 989, 1016, 1252, 1358
MaeI	CTAG	4 cut(s)	635, 881, 1458, 1502
MaeII	ACGT	3 cut(s)	135, 280, 741
MaeIII	GTNAC	3 cut(s)	607, 944, 1627
MalI	GATC	7 cut(s)	165, 390, 642, 1041, 1373, 1559, 1767
MboI	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
MboII	GAAGA	9 cut(s)	46, 335, 340, 383, 836, 905, 1148, 1162, 1430
MflI	RGATCY	3 cut(s)	388, 640, 1765
MhlI	GDGCHC	1 cut(s)	1231
MlsI	TGGCCA	3 cut(s)	380, 580, 1512
MluCI	AATT	9 cut(s)	208, 591, 663, 839, 862, 876, 1016, 1020, 1319
MluNI	TGGCCA	3 cut(s)	380, 580, 1512
MmeI	TCCRAC	2 cut(s)	652, 1410
Mox20I	TGGCCA	3 cut(s)	380, 580, 1512
Mph1103I	ATGCAT	1 cut(s)	916
MroXI	GAANNNNTTC	4 cut(s)	450, 679, 828, 1203
MscI	TGGCCA	3 cut(s)	380, 580, 1512
MseI	TTAA	8 cut(s)	539, 569, 792, 957, 1019, 1215, 1356, 1773
MslI	CAYNNNNRTG	1 cut(s)	1236
Msp20I	TGGCCA	3 cut(s)	380, 580, 1512
MspCI	CTTAAG	1 cut(s)	791
MspI	CCGG	2 cut(s)	1065, 1478
MspR9I	CCNGG	5 cut(s)	181, 1478, 1509, 1514, 1539
MvaI	CCWGG	4 cut(s)	181, 1509, 1514, 1539
MwoI	GCNNNNNNNGC	9 cut(s)	194, 1070, 1271, 1421, 1454, 1523, 1610, 1700, 1712
NciI	CCSGG	1 cut(s)	1478
NcoI	CCATGG	1 cut(s)	1344
NdeII	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
NlaIII	CATG	8 cut(s)	79, 385, 723, 847, 1235, 1241, 1348, 1434
NlaIV	GGNNCC	3 cut(s)	360, 1063, 1570
NmuCI	GTSAC	3 cut(s)	607, 944, 1627
NsiI	ATGCAT	1 cut(s)	916
NspI	RCATGY	1 cut(s)	723
NspV	TTCGAA	1 cut(s)	346
PaeI	GCATGC	1 cut(s)	723
PagI	TCATGA	2 cut(s)	843, 1231
PciSI	GCTCTTC	1 cut(s)	819
PdmI	GAANNNNTTC	4 cut(s)	450, 679, 828, 1203
PfeI	GAWTC	2 cut(s)	1166, 1199
PflMI	CCANNNNNTGG	1 cut(s)	66
PkrI	GCNGC	4 cut(s)	924, 1603, 1705, 1717
Ppu21I	YACGTR	1 cut(s)	281
PshAI	GACNNNNGTC	2 cut(s)	851, 1734
PshBI	ATTAAT	1 cut(s)	1019
PsiI	TTATAA	1 cut(s)	420
Psp6I	CCWGG	4 cut(s)	179, 1507, 1512, 1537
PspGI	CCWGG	4 cut(s)	179, 1507, 1512, 1537
PspN4I	GGNNCC	3 cut(s)	360, 1063, 1570
PspPI	GGNCC	1 cut(s)	1434
PstI	CTGCAG	1 cut(s)	853
PstNI	CAGNNNCTG	2 cut(s)	983, 1607
PsuI	RGATCY	3 cut(s)	388, 640, 1765
RsaI	GTAC	5 cut(s)	140, 464, 1411, 1581, 1796
RsaNI	GTAC	5 cut(s)	139, 463, 1410, 1580, 1795
RseI	CAYNNNNRTG	1 cut(s)	1236
SapI	GCTCTTC	1 cut(s)	819
SaqAI	TTAA	8 cut(s)	539, 569, 792, 957, 1019, 1215, 1356, 1773
SatI	GCNGC	4 cut(s)	923, 1602, 1704, 1716
Sau3AI	GATC	7 cut(s)	163, 388, 640, 1039, 1371, 1557, 1765
Sau96I	GGNCC	1 cut(s)	1434
ScrFI	CCNGG	5 cut(s)	181, 1478, 1509, 1514, 1539
SduI	GDGCHC	1 cut(s)	1231
SfaNI	GCATC	6 cut(s)	256, 324, 989, 1016, 1252, 1358
SfcI	CTRYAG	3 cut(s)	471, 849, 1807
SfuI	TTCGAA	1 cut(s)	346
SinI	GGWCC	1 cut(s)	1434
SmiMI	CAYNNNNRTG	1 cut(s)	1236
SmlI	CTYRAG	3 cut(s)	791, 833, 1103
SmoI	CTYRAG	3 cut(s)	791, 833, 1103
SphI	GCATGC	1 cut(s)	723
Sse9I	AATT	9 cut(s)	208, 591, 663, 839, 862, 876, 1016, 1020, 1319
SsiI	CCGC	1 cut(s)	1088
SspMI	CTAG	4 cut(s)	635, 881, 1458, 1502
StyD4I	CCNGG	5 cut(s)	179, 1476, 1507, 1512, 1537
StyI	CCWWGG	5 cut(s)	60, 1223, 1344, 1437, 1732
TaaI	ACNGT	5 cut(s)	143, 475, 938, 1288, 1723
TaiI	ACGT	3 cut(s)	138, 283, 744
TaqI	TCGA	5 cut(s)	346, 561, 1260, 1338, 1756
TasI	AATT	9 cut(s)	208, 591, 663, 839, 862, 876, 1016, 1020, 1319
TatI	WGTACW	4 cut(s)	462, 1409, 1579, 1794
TfiI	GAWTC	2 cut(s)	1166, 1199
Tru1I	TTAA	8 cut(s)	539, 569, 792, 957, 1019, 1215, 1356, 1773
Tru9I	TTAA	8 cut(s)	539, 569, 792, 957, 1019, 1215, 1356, 1773
TscAI	CASTG	3 cut(s)	256, 790, 1293
TseFI	GTSAC	3 cut(s)	607, 944, 1627
TseI	GCWGC	4 cut(s)	922, 1601, 1703, 1715
Tsp45I	GTSAC	3 cut(s)	607, 944, 1627
TspDTI	ATGAA	6 cut(s)	64, 420, 832, 837, 1254, 1602
TspGWI	ACGGA	1 cut(s)	173
TspRI	CASTG	3 cut(s)	256, 790, 1293
Van91I	CCANNNNNTGG	1 cut(s)	66
Vha464I	CTTAAG	1 cut(s)	791
VpaK11BI	GGWCC	1 cut(s)	1434
VspI	ATTAAT	1 cut(s)	1019
XapI	RAATTY	4 cut(s)	591, 663, 839, 876
XceI	RCATGY	1 cut(s)	723
XmiI	GTMKAC	1 cut(s)	689
XmnI	GAANNNNTTC	4 cut(s)	450, 679, 828, 1203
XspI	CTAG	4 cut(s)	635, 881, 1458, 1502
Zsp2I	ATGCAT	1 cut(s)	916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.