BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05130 AT5G27330 |
| fragaria_vesca | FvH4_6g04961 |
| malus_domestica | MD04G1212300.v1.1 MD12G1227100.v1.1 |
| prunus_persica | Prupe.6G332700_v2.0.a1 |
| pyrus_communis | pycom04g18840 pycom12g21180 |
| rosa_chinensis | RchiOBHm_Chr3g0453461 |
| rosa_laevigata | RLG00000025512 |
| rosa_multiflora | Rmu_sc0000510.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00430430 |
| rosa_rugosa | Rorug02G0649200 |
| rosa_samantha | Rh3AG052000 Rh3BG053500 Rh3CG052800 Rh3DG053600 |
| rosa_wichuraiana | Rw3G004010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1236 |
| AciI | CCGC | 1 cut(s) | 1193 |
| AcsI | RAATTY | 3 cut(s) | 57, 157, 319 |
| AcuI | CTGAAG | 2 cut(s) | 206, 1634 |
| AfaI | GTAC | 1 cut(s) | 75 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1288, 1522 |
| AflII | CTTAAG | 2 cut(s) | 1286, 1370 |
| AjiI | CACGTC | 1 cut(s) | 818 |
| AjnI | CCWGG | 2 cut(s) | 228, 1158 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 227, 259, 638, 670, 1457, 1489 |
| Alw26I | GTCTC | 5 cut(s) | 24, 199, 422, 808, 1314 |
| ApeKI | GCWGC | 7 cut(s) | 49, 1144, 1219, 1222, 1699, 1853, 1871 |
| ApoI | RAATTY | 3 cut(s) | 57, 157, 319 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 150, 1684, 1721 |
| AspLEI | GCGC | 2 cut(s) | 1219, 1303 |
| AspS9I | GGNCC | 2 cut(s) | 127, 1818 |
| AsuHPI | GGTGA | 6 cut(s) | 598, 670, 697, 823, 1208, 1268 |
| AvaII | GGWCC | 2 cut(s) | 127, 1818 |
| BbsI | GAAGAC | 1 cut(s) | 284 |
| BbvI | GCAGC | 7 cut(s) | 61, 1156, 1209, 1231, 1711, 1840, 1858 |
| BccI | CCATC | 3 cut(s) | 790, 802, 1066 |
| BciT130I | CCWGG | 2 cut(s) | 230, 1160 |
| BclI | TGATCA | 2 cut(s) | 820, 1240 |
| BcoDI | GTCTC | 5 cut(s) | 24, 199, 422, 808, 1314 |
| BfaI | CTAG | 3 cut(s) | 1571, 1631, 1703 |
| BfoI | RGCGCY | 1 cut(s) | 1304 |
| BfrI | CTTAAG | 2 cut(s) | 1286, 1370 |
| BisI | GCNGC | 7 cut(s) | 50, 1145, 1220, 1223, 1700, 1854, 1872 |
| BlpI | GCTNAGC | 2 cut(s) | 975, 1440 |
| BlsI | GCNGC | 7 cut(s) | 51, 1146, 1221, 1224, 1701, 1855, 1873 |
| Bme1390I | CCNGG | 2 cut(s) | 230, 1160 |
| Bme18I | GGWCC | 2 cut(s) | 127, 1818 |
| BmgBI | CACGTC | 1 cut(s) | 818 |
| BmgT120I | GGNCC | 2 cut(s) | 127, 1818 |
| BmiI | GGNNCC | 2 cut(s) | 1585, 1820 |
| BmrFI | CCNGG | 2 cut(s) | 230, 1160 |
| BmsI | GCATC | 2 cut(s) | 1282, 1783 |
| BpiI | GAAGAC | 1 cut(s) | 284 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 975, 1440 |
| BpuEI | CTTGAG | 4 cut(s) | 752, 1046, 1445, 1865 |
| Bsa29I | ATCGAT | 1 cut(s) | 1483 |
| BsaAI | YACGTR | 1 cut(s) | 911 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 119, 134, 149, 164, 239, 269, 609, 639 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1288, 1522 |
| Bse1I | ACTGG | 5 cut(s) | 77, 1110, 1194, 1417, 1770 |
| Bse3DI | GCAATG | 1 cut(s) | 1279 |
| BseBI | CCWGG | 2 cut(s) | 230, 1160 |
| BseCI | ATCGAT | 1 cut(s) | 1483 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 1 cut(s) | 1297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1288, 1522 |
| BseMI | GCAATG | 1 cut(s) | 1279 |
| BseMII | CTCAG | 7 cut(s) | 423, 966, 1011, 1158, 1172, 1431, 1479 |
| BseNI | ACTGG | 5 cut(s) | 77, 1110, 1194, 1417, 1770 |
| BseRI | GAGGAG | 8 cut(s) | 127, 308, 572, 695, 724, 749, 1361, 1835 |
| BseXI | GCAGC | 7 cut(s) | 61, 1156, 1209, 1231, 1711, 1840, 1858 |
| BseYI | CCCAGC | 1 cut(s) | 856 |
| BsgI | GTGCAG | 2 cut(s) | 1163, 1718 |
| BshVI | ATCGAT | 1 cut(s) | 1483 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1288, 1522 |
| BsmAI | GTCTC | 5 cut(s) | 24, 199, 422, 808, 1314 |
| BsmBI | CGTCTC | 1 cut(s) | 808 |
| BsmI | GAATGC | 1 cut(s) | 1780 |
| Bsp143I | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 975, 1440 |
| BspACI | CCGC | 1 cut(s) | 1193 |
| BspCNI | CTCAG | 7 cut(s) | 424, 967, 1012, 1159, 1173, 1432, 1480 |
| BspDI | ATCGAT | 1 cut(s) | 1483 |
| BspLI | GGNNCC | 2 cut(s) | 1585, 1820 |
| BspQI | GCTCTTC | 1 cut(s) | 1802 |
| BspTI | CTTAAG | 2 cut(s) | 1286, 1370 |
| BsrDI | GCAATG | 1 cut(s) | 1279 |
| BsrI | ACTGG | 5 cut(s) | 77, 1110, 1194, 1417, 1770 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssMI | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| Bst2UI | CCWGG | 2 cut(s) | 230, 1160 |
| Bst4CI | ACNGT | 1 cut(s) | 1009 |
| BstAFI | CTTAAG | 2 cut(s) | 1286, 1370 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1120 |
| BstBAI | YACGTR | 1 cut(s) | 911 |
| BstC8I | GCNNGC | 2 cut(s) | 1209, 1283 |
| BstDEI | CTNAG | 9 cut(s) | 104, 432, 891, 975, 1020, 1167, 1181, 1440, 1488 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| BstF5I | GGATG | 1 cut(s) | 1297 |
| BstH2I | RGCGCY | 1 cut(s) | 1304 |
| BstHHI | GCGC | 2 cut(s) | 1219, 1303 |
| BstKTI | GATC | 5 cut(s) | 252, 823, 984, 1243, 1487 |
| BstMAI | GTCTC | 5 cut(s) | 24, 199, 422, 808, 1314 |
| BstMBI | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1120, 1278, 1334, 1862, 1871 |
| BstNI | CCWGG | 2 cut(s) | 230, 1160 |
| BstNSI | RCATGY | 1 cut(s) | 1211 |
| BstSCI | CCNGG | 2 cut(s) | 228, 1158 |
| BstV1I | GCAGC | 7 cut(s) | 61, 1156, 1209, 1231, 1711, 1840, 1858 |
| BstV2I | GAAGAC | 1 cut(s) | 284 |
| Bsu15I | ATCGAT | 1 cut(s) | 1483 |
| BsuTUI | ATCGAT | 1 cut(s) | 1483 |
| BtgZI | GCGATG | 1 cut(s) | 327 |
| BtrI | CACGTC | 1 cut(s) | 818 |
| BtsCI | GGATG | 1 cut(s) | 1297 |
| Cac8I | GCNNGC | 2 cut(s) | 1209, 1283 |
| CfoI | GCGC | 2 cut(s) | 1219, 1303 |
| Cfr13I | GGNCC | 2 cut(s) | 127, 1818 |
| ClaI | ATCGAT | 1 cut(s) | 1483 |
| Csp6I | GTAC | 1 cut(s) | 74 |
| CviAII | CATG | 6 cut(s) | 131, 325, 1208, 1360, 1741, 1849 |
| CviQI | GTAC | 1 cut(s) | 74 |
| DdeI | CTNAG | 9 cut(s) | 104, 432, 891, 975, 1020, 1167, 1181, 1440, 1488 |
| DpnI | GATC | 5 cut(s) | 251, 822, 983, 1242, 1486 |
| DpnII | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| Eco32I | GATATC | 1 cut(s) | 1528 |
| Eco47I | GGWCC | 2 cut(s) | 127, 1818 |
| Eco57I | CTGAAG | 2 cut(s) | 206, 1634 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| EcoRII | CCWGG | 2 cut(s) | 228, 1158 |
| EcoRV | GATATC | 1 cut(s) | 1528 |
| Esp3I | CGTCTC | 1 cut(s) | 808 |
| FaeI | CATG | 6 cut(s) | 134, 328, 1211, 1363, 1744, 1852 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1796, 1828 |
| FatI | CATG | 6 cut(s) | 130, 324, 1207, 1359, 1740, 1848 |
| FauI | CCCGC | 1 cut(s) | 1186 |
| FbaI | TGATCA | 2 cut(s) | 820, 1240 |
| Fnu4HI | GCNGC | 7 cut(s) | 50, 1145, 1220, 1223, 1700, 1854, 1872 |
| FokI | GGATG | 1 cut(s) | 1304 |
| Fsp4HI | GCNGC | 7 cut(s) | 50, 1145, 1220, 1223, 1700, 1854, 1872 |
| FspBI | CTAG | 3 cut(s) | 1571, 1631, 1703 |
| GlaI | GCGC | 2 cut(s) | 1218, 1302 |
| GluI | GCNGC | 7 cut(s) | 50, 1145, 1220, 1223, 1700, 1854, 1872 |
| GsaI | CCCAGC | 1 cut(s) | 860 |
| HaeII | RGCGCY | 1 cut(s) | 1304 |
| HhaI | GCGC | 2 cut(s) | 1219, 1303 |
| Hin1II | CATG | 6 cut(s) | 134, 328, 1211, 1363, 1744, 1852 |
| Hin6I | GCGC | 2 cut(s) | 1217, 1301 |
| HinP1I | GCGC | 2 cut(s) | 1217, 1301 |
| HincII | GTYRAC | 1 cut(s) | 1156 |
| HindII | GTYRAC | 1 cut(s) | 1156 |
| HindIII | AAGCTT | 1 cut(s) | 1262 |
| HpaI | GTTAAC | 1 cut(s) | 1156 |
| HphI | GGTGA | 6 cut(s) | 598, 670, 697, 823, 1208, 1268 |
| Hpy166II | GTNNAC | 2 cut(s) | 1156, 1187 |
| Hpy188I | TCNGA | 8 cut(s) | 63, 142, 156, 186, 825, 1021, 1093, 1489 |
| Hpy188III | TCNNGA | 8 cut(s) | 110, 267, 290, 941, 1249, 1315, 1340, 1714 |
| Hpy8I | GTNNAC | 2 cut(s) | 1156, 1187 |
| Hpy99I | CGWCG | 1 cut(s) | 100 |
| HpyAV | CCTTC | 6 cut(s) | 568, 655, 733, 770, 1526, 1753 |
| HpyCH4III | ACNGT | 1 cut(s) | 1009 |
| HpyCH4IV | ACGT | 2 cut(s) | 817, 910 |
| HpyCH4V | TGCA | 7 cut(s) | 550, 1084, 1144, 1272, 1592, 1699, 1796 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1120, 1278, 1334, 1862, 1871 |
| HpyF3I | CTNAG | 9 cut(s) | 104, 432, 891, 975, 1020, 1167, 1181, 1440, 1488 |
| HpySE526I | ACGT | 2 cut(s) | 817, 910 |
| Hsp92II | CATG | 6 cut(s) | 134, 328, 1211, 1363, 1744, 1852 |
| HspAI | GCGC | 2 cut(s) | 1217, 1301 |
| Ksp22I | TGATCA | 2 cut(s) | 820, 1240 |
| KspAI | GTTAAC | 1 cut(s) | 1156 |
| Kzo9I | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| LguI | GCTCTTC | 1 cut(s) | 1802 |
| LmnI | GCTCC | 1 cut(s) | 35 |
| Lsp1109I | GCAGC | 7 cut(s) | 61, 1156, 1209, 1231, 1711, 1840, 1858 |
| LweI | GCATC | 2 cut(s) | 1282, 1783 |
| MaeI | CTAG | 3 cut(s) | 1571, 1631, 1703 |
| MaeII | ACGT | 2 cut(s) | 817, 910 |
| MaeIII | GTNAC | 6 cut(s) | 23, 79, 165, 906, 949, 1834 |
| MalI | GATC | 5 cut(s) | 251, 822, 983, 1242, 1486 |
| MboI | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| MfeI | CAATTG | 1 cut(s) | 1115 |
| MluCI | AATT | 9 cut(s) | 57, 157, 319, 716, 771, 1048, 1085, 1115, 1472 |
| MlyI | GAGTC | 4 cut(s) | 122, 128, 946, 1499 |
| MmeI | TCCRAC | 4 cut(s) | 225, 573, 825, 909 |
| MroXI | GAANNNNTTC | 3 cut(s) | 150, 1684, 1721 |
| MspA1I | CMGCKG | 1 cut(s) | 1222 |
| MspCI | CTTAAG | 2 cut(s) | 1286, 1370 |
| MspR9I | CCNGG | 2 cut(s) | 230, 1160 |
| MunI | CAATTG | 1 cut(s) | 1115 |
| Mva1269I | GAATGC | 1 cut(s) | 1780 |
| MvaI | CCWGG | 2 cut(s) | 230, 1160 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1120, 1278, 1334, 1862, 1871 |
| NdeII | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| NlaIII | CATG | 6 cut(s) | 134, 328, 1211, 1363, 1744, 1852 |
| NlaIV | GGNNCC | 2 cut(s) | 1585, 1820 |
| NmuCI | GTSAC | 2 cut(s) | 79, 165 |
| NspI | RCATGY | 1 cut(s) | 1211 |
| PaeI | GCATGC | 1 cut(s) | 1211 |
| PciSI | GCTCTTC | 1 cut(s) | 1802 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 959 |
| PctI | GAATGC | 1 cut(s) | 1780 |
| PdmI | GAANNNNTTC | 3 cut(s) | 150, 1684, 1721 |
| PfeI | GAWTC | 9 cut(s) | 64, 178, 218, 239, 565, 1016, 1480, 1574, 1685 |
| PkrI | GCNGC | 7 cut(s) | 51, 1146, 1221, 1224, 1701, 1855, 1873 |
| PleI | GAGTC | 4 cut(s) | 121, 128, 945, 1498 |
| PpsI | GAGTC | 4 cut(s) | 121, 128, 945, 1498 |
| Ppu21I | YACGTR | 1 cut(s) | 911 |
| PsiI | TTATAA | 1 cut(s) | 1236 |
| Psp6I | CCWGG | 2 cut(s) | 228, 1158 |
| PspFI | CCCAGC | 1 cut(s) | 856 |
| PspGI | CCWGG | 2 cut(s) | 228, 1158 |
| PspN4I | GGNNCC | 2 cut(s) | 1585, 1820 |
| PspPI | GGNCC | 2 cut(s) | 127, 1818 |
| PvuII | CAGCTG | 1 cut(s) | 1222 |
| RsaI | GTAC | 1 cut(s) | 75 |
| RsaNI | GTAC | 1 cut(s) | 74 |
| SapI | GCTCTTC | 1 cut(s) | 1802 |
| SatI | GCNGC | 7 cut(s) | 50, 1145, 1220, 1223, 1700, 1854, 1872 |
| Sau3AI | GATC | 5 cut(s) | 249, 820, 981, 1240, 1484 |
| Sau96I | GGNCC | 2 cut(s) | 127, 1818 |
| SchI | GAGTC | 4 cut(s) | 122, 128, 946, 1499 |
| ScrFI | CCNGG | 2 cut(s) | 230, 1160 |
| SfaNI | GCATC | 2 cut(s) | 1282, 1783 |
| SinI | GGWCC | 2 cut(s) | 127, 1818 |
| SmlI | CTYRAG | 6 cut(s) | 731, 1025, 1286, 1370, 1424, 1880 |
| SmoI | CTYRAG | 6 cut(s) | 731, 1025, 1286, 1370, 1424, 1880 |
| SphI | GCATGC | 1 cut(s) | 1211 |
| Sse9I | AATT | 9 cut(s) | 57, 157, 319, 716, 771, 1048, 1085, 1115, 1472 |
| SsiI | CCGC | 1 cut(s) | 1193 |
| SspMI | CTAG | 3 cut(s) | 1571, 1631, 1703 |
| StyD4I | CCNGG | 2 cut(s) | 228, 1158 |
| TaaI | ACNGT | 1 cut(s) | 1009 |
| TaiI | ACGT | 2 cut(s) | 820, 913 |
| TaqI | TCGA | 7 cut(s) | 95, 252, 308, 1052, 1314, 1483, 1746 |
| TasI | AATT | 9 cut(s) | 57, 157, 319, 716, 771, 1048, 1085, 1115, 1472 |
| TfiI | GAWTC | 9 cut(s) | 64, 178, 218, 239, 565, 1016, 1480, 1574, 1685 |
| TseFI | GTSAC | 2 cut(s) | 79, 165 |
| TseI | GCWGC | 7 cut(s) | 49, 1144, 1219, 1222, 1699, 1853, 1871 |
| Tsp45I | GTSAC | 2 cut(s) | 79, 165 |
| TspDTI | ATGAA | 9 cut(s) | 313, 578, 881, 1002, 1149, 1419, 1769, 1790, 1818 |
| TspGWI | ACGGA | 1 cut(s) | 968 |
| Vha464I | CTTAAG | 2 cut(s) | 1286, 1370 |
| VpaK11BI | GGWCC | 2 cut(s) | 127, 1818 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1520 |
| XapI | RAATTY | 3 cut(s) | 57, 157, 319 |
| XceI | RCATGY | 1 cut(s) | 1211 |
| XmnI | GAANNNNTTC | 3 cut(s) | 150, 1684, 1721 |
| XspI | CTAG | 3 cut(s) | 1571, 1631, 1703 |